Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031060.t1 | XP_003618528.2 | 96 | 321 | 13 | 0 | 1 | 321 | 1 | 321 | 1.50E-182 | 648.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031060.t1 | Q9FLJ2 | 51.2 | 342 | 120 | 8 | 13 | 321 | 9 | 336 | 5.9e-84 | 312.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031060.t1 | G7KKX5 | 96.0 | 321 | 13 | 0 | 1 | 321 | 1 | 321 | 1.0e-182 | 648.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene031060.t1 | TF | NAC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031060.t1 | MTR_6g012670 | 95.950 | 321 | 13 | 0 | 1 | 321 | 1 | 321 | 0.0 | 650 |
MS.gene031060.t1 | MTR_4g108760 | 63.559 | 236 | 75 | 4 | 15 | 246 | 12 | 240 | 9.38e-105 | 311 |
MS.gene031060.t1 | MTR_3g070030 | 48.295 | 352 | 124 | 6 | 15 | 321 | 14 | 352 | 2.82e-102 | 304 |
MS.gene031060.t1 | MTR_3g435150 | 51.077 | 325 | 129 | 7 | 5 | 321 | 1 | 303 | 1.39e-100 | 298 |
MS.gene031060.t1 | MTR_7g011130 | 47.899 | 357 | 144 | 7 | 2 | 321 | 1 | 352 | 6.10e-99 | 295 |
MS.gene031060.t1 | MTR_7g011120 | 47.164 | 335 | 122 | 7 | 15 | 321 | 3 | 310 | 6.19e-91 | 274 |
MS.gene031060.t1 | MTR_3g070040 | 45.559 | 349 | 132 | 8 | 15 | 321 | 3 | 335 | 4.57e-89 | 270 |
MS.gene031060.t1 | MTR_7g085260 | 62.201 | 209 | 68 | 3 | 11 | 208 | 8 | 216 | 1.96e-87 | 267 |
MS.gene031060.t1 | MTR_6g032770 | 54.023 | 261 | 84 | 8 | 13 | 247 | 11 | 261 | 2.97e-86 | 264 |
MS.gene031060.t1 | MTR_2g078700 | 58.065 | 217 | 65 | 3 | 20 | 210 | 23 | 239 | 1.30e-81 | 252 |
MS.gene031060.t1 | MTR_6g084430 | 68.790 | 157 | 45 | 1 | 20 | 176 | 5 | 157 | 2.28e-78 | 242 |
MS.gene031060.t1 | MTR_1g008740 | 64.375 | 160 | 51 | 3 | 20 | 176 | 13 | 169 | 3.39e-70 | 222 |
MS.gene031060.t1 | MTR_1g008740 | 64.375 | 160 | 51 | 3 | 20 | 176 | 27 | 183 | 4.48e-70 | 222 |
MS.gene031060.t1 | MTR_3g109340 | 64.780 | 159 | 51 | 2 | 20 | 176 | 22 | 177 | 3.97e-69 | 219 |
MS.gene031060.t1 | MTR_3g109340 | 64.151 | 159 | 51 | 2 | 20 | 176 | 22 | 176 | 1.38e-68 | 218 |
MS.gene031060.t1 | MTR_3g116070 | 60.920 | 174 | 61 | 4 | 1 | 167 | 1 | 174 | 5.27e-66 | 211 |
MS.gene031060.t1 | MTR_2g064470 | 45.455 | 253 | 122 | 5 | 19 | 267 | 10 | 250 | 3.93e-65 | 207 |
MS.gene031060.t1 | MTR_8g059170 | 54.375 | 160 | 73 | 0 | 17 | 176 | 11 | 170 | 4.80e-59 | 192 |
MS.gene031060.t1 | MTR_7g085220 | 52.410 | 166 | 68 | 2 | 20 | 174 | 8 | 173 | 1.51e-58 | 192 |
MS.gene031060.t1 | MTR_2g064090 | 56.774 | 155 | 62 | 3 | 20 | 171 | 6 | 158 | 9.62e-58 | 190 |
MS.gene031060.t1 | MTR_3g088110 | 52.381 | 168 | 78 | 2 | 17 | 183 | 4 | 170 | 1.63e-57 | 187 |
MS.gene031060.t1 | MTR_4g036030 | 39.189 | 296 | 163 | 8 | 20 | 308 | 7 | 292 | 2.96e-57 | 188 |
MS.gene031060.t1 | MTR_4g081870 | 50.296 | 169 | 82 | 1 | 12 | 178 | 1 | 169 | 5.41e-57 | 186 |
MS.gene031060.t1 | MTR_2g079990 | 54.375 | 160 | 71 | 1 | 17 | 176 | 13 | 170 | 5.78e-57 | 188 |
MS.gene031060.t1 | MTR_5g041940 | 50.000 | 172 | 84 | 1 | 19 | 188 | 2 | 173 | 1.61e-56 | 184 |
MS.gene031060.t1 | MTR_7g100990 | 56.329 | 158 | 65 | 2 | 17 | 170 | 8 | 165 | 3.68e-56 | 185 |
MS.gene031060.t1 | MTR_4g035590 | 55.556 | 171 | 62 | 3 | 20 | 181 | 8 | 173 | 6.98e-56 | 185 |
MS.gene031060.t1 | MTR_8g076110 | 53.846 | 156 | 65 | 3 | 20 | 172 | 6 | 157 | 1.29e-55 | 183 |
MS.gene031060.t1 | MTR_4g101680 | 55.195 | 154 | 62 | 3 | 20 | 170 | 7 | 156 | 3.46e-55 | 184 |
MS.gene031060.t1 | MTR_2157s0010 | 53.704 | 162 | 65 | 3 | 20 | 171 | 8 | 169 | 5.55e-55 | 180 |
MS.gene031060.t1 | MTR_1g069805 | 53.247 | 154 | 64 | 2 | 20 | 171 | 10 | 157 | 8.09e-55 | 180 |
MS.gene031060.t1 | MTR_5g012080 | 44.915 | 236 | 106 | 9 | 20 | 242 | 7 | 231 | 1.45e-54 | 181 |
MS.gene031060.t1 | MTR_5g021710 | 54.487 | 156 | 64 | 3 | 20 | 172 | 8 | 159 | 1.63e-54 | 181 |
MS.gene031060.t1 | MTR_8g094580 | 55.484 | 155 | 66 | 2 | 18 | 170 | 5 | 158 | 2.18e-54 | 179 |
MS.gene031060.t1 | MTR_7g097090 | 47.150 | 193 | 90 | 4 | 20 | 206 | 10 | 196 | 5.77e-54 | 178 |
MS.gene031060.t1 | MTR_2g062730 | 50.595 | 168 | 75 | 3 | 12 | 175 | 2 | 165 | 1.08e-53 | 179 |
MS.gene031060.t1 | MTR_3g064580 | 55.128 | 156 | 67 | 2 | 20 | 173 | 6 | 160 | 1.39e-53 | 186 |
MS.gene031060.t1 | MTR_2g080010 | 37.457 | 291 | 145 | 10 | 20 | 281 | 15 | 297 | 1.44e-53 | 179 |
MS.gene031060.t1 | MTR_2g093810 | 51.786 | 168 | 77 | 2 | 14 | 177 | 8 | 175 | 1.47e-53 | 178 |
MS.gene031060.t1 | MTR_6g477900 | 53.548 | 155 | 68 | 2 | 20 | 172 | 6 | 158 | 4.70e-53 | 174 |
MS.gene031060.t1 | MTR_8g024480 | 50.000 | 174 | 72 | 4 | 19 | 182 | 14 | 182 | 5.37e-53 | 180 |
MS.gene031060.t1 | MTR_3g096920 | 52.866 | 157 | 72 | 2 | 17 | 172 | 4 | 159 | 7.68e-53 | 175 |
MS.gene031060.t1 | MTR_5g076850 | 53.416 | 161 | 61 | 3 | 20 | 173 | 6 | 159 | 1.33e-52 | 183 |
MS.gene031060.t1 | MTR_8g467490 | 40.221 | 271 | 130 | 8 | 16 | 267 | 8 | 265 | 1.72e-52 | 177 |
MS.gene031060.t1 | MTR_2g079990 | 47.059 | 187 | 71 | 2 | 17 | 176 | 13 | 198 | 2.15e-52 | 177 |
MS.gene031060.t1 | MTR_1g096430 | 51.923 | 156 | 68 | 2 | 20 | 172 | 7 | 158 | 3.07e-52 | 175 |
MS.gene031060.t1 | MTR_4g089135 | 47.191 | 178 | 71 | 3 | 19 | 173 | 14 | 191 | 6.41e-52 | 174 |
MS.gene031060.t1 | MTR_7g005280 | 48.000 | 175 | 82 | 4 | 12 | 184 | 7 | 174 | 6.16e-51 | 169 |
MS.gene031060.t1 | MTR_5g040420 | 53.797 | 158 | 65 | 3 | 22 | 171 | 16 | 173 | 7.16e-50 | 171 |
MS.gene031060.t1 | MTR_6g011860 | 52.795 | 161 | 68 | 3 | 19 | 171 | 14 | 174 | 1.22e-49 | 170 |
MS.gene031060.t1 | MTR_3g096920 | 59.091 | 132 | 53 | 1 | 17 | 148 | 4 | 134 | 3.56e-49 | 167 |
MS.gene031060.t1 | MTR_5g014300 | 51.250 | 160 | 64 | 3 | 20 | 170 | 6 | 160 | 7.54e-48 | 164 |
MS.gene031060.t1 | MTR_3g093050 | 54.545 | 154 | 66 | 2 | 20 | 171 | 22 | 173 | 2.40e-47 | 168 |
MS.gene031060.t1 | MTR_3g093050 | 54.545 | 154 | 66 | 2 | 20 | 171 | 22 | 173 | 4.19e-47 | 167 |
MS.gene031060.t1 | MTR_5g069030 | 50.602 | 166 | 71 | 3 | 19 | 175 | 24 | 187 | 1.85e-46 | 166 |
MS.gene031060.t1 | MTR_4g098630 | 41.553 | 219 | 111 | 5 | 16 | 223 | 2 | 214 | 2.55e-46 | 159 |
MS.gene031060.t1 | MTR_1g090723 | 45.361 | 194 | 93 | 6 | 22 | 205 | 10 | 200 | 2.91e-46 | 166 |
MS.gene031060.t1 | MTR_3g096140 | 46.707 | 167 | 85 | 2 | 22 | 186 | 9 | 173 | 4.08e-46 | 157 |
MS.gene031060.t1 | MTR_1g090723 | 43.814 | 194 | 95 | 6 | 22 | 205 | 10 | 199 | 7.32e-46 | 164 |
MS.gene031060.t1 | MTR_1g090723 | 43.814 | 194 | 95 | 6 | 22 | 205 | 10 | 199 | 8.30e-46 | 164 |
MS.gene031060.t1 | MTR_3g093040 | 49.697 | 165 | 72 | 3 | 20 | 175 | 108 | 270 | 1.20e-45 | 157 |
MS.gene031060.t1 | MTR_3g096140 | 46.707 | 167 | 85 | 2 | 22 | 186 | 9 | 173 | 1.63e-45 | 158 |
MS.gene031060.t1 | MTR_4g134460 | 51.299 | 154 | 68 | 3 | 22 | 173 | 56 | 204 | 2.02e-45 | 160 |
MS.gene031060.t1 | MTR_8g063550 | 44.186 | 172 | 88 | 3 | 19 | 186 | 5 | 172 | 5.59e-45 | 156 |
MS.gene031060.t1 | MTR_8g063550 | 44.186 | 172 | 88 | 3 | 19 | 186 | 5 | 172 | 1.27e-44 | 158 |
MS.gene031060.t1 | MTR_1g090720 | 48.447 | 161 | 77 | 2 | 20 | 174 | 42 | 202 | 3.74e-44 | 157 |
MS.gene031060.t1 | MTR_8g063550 | 44.186 | 172 | 88 | 3 | 19 | 186 | 5 | 172 | 4.45e-44 | 156 |
MS.gene031060.t1 | MTR_2g068880 | 45.556 | 180 | 81 | 6 | 12 | 176 | 15 | 192 | 6.02e-44 | 153 |
MS.gene031060.t1 | MTR_5g090970 | 47.273 | 165 | 77 | 2 | 22 | 176 | 20 | 184 | 8.88e-44 | 152 |
MS.gene031060.t1 | MTR_1g097300 | 48.101 | 158 | 76 | 3 | 22 | 176 | 21 | 175 | 9.40e-44 | 158 |
MS.gene031060.t1 | MTR_0036s0150 | 49.367 | 158 | 74 | 3 | 22 | 176 | 7 | 161 | 2.57e-43 | 156 |
MS.gene031060.t1 | MTR_5g090970 | 47.273 | 165 | 76 | 3 | 22 | 176 | 20 | 183 | 1.93e-42 | 149 |
MS.gene031060.t1 | MTR_8g093580 | 43.023 | 172 | 90 | 3 | 19 | 186 | 5 | 172 | 2.19e-42 | 153 |
MS.gene031060.t1 | MTR_2g068920 | 44.706 | 170 | 78 | 5 | 22 | 176 | 23 | 191 | 6.95e-42 | 147 |
MS.gene031060.t1 | MTR_4g075980 | 44.025 | 159 | 79 | 2 | 22 | 177 | 17 | 168 | 1.27e-40 | 144 |
MS.gene031060.t1 | MTR_2g086880 | 47.619 | 147 | 67 | 2 | 22 | 167 | 20 | 157 | 4.83e-39 | 144 |
MS.gene031060.t1 | MTR_2g086880 | 47.619 | 147 | 67 | 2 | 22 | 167 | 20 | 157 | 6.59e-39 | 145 |
MS.gene031060.t1 | MTR_8g099750 | 41.250 | 160 | 87 | 3 | 20 | 174 | 14 | 171 | 2.89e-37 | 133 |
MS.gene031060.t1 | MTR_3g098810 | 42.857 | 161 | 80 | 4 | 19 | 170 | 13 | 170 | 1.14e-36 | 132 |
MS.gene031060.t1 | MTR_3g096140 | 43.791 | 153 | 82 | 2 | 36 | 186 | 2 | 152 | 7.60e-36 | 132 |
MS.gene031060.t1 | MTR_8g023840 | 51.908 | 131 | 57 | 4 | 18 | 143 | 9 | 138 | 1.12e-35 | 133 |
MS.gene031060.t1 | MTR_3g098810 | 47.328 | 131 | 63 | 2 | 19 | 145 | 13 | 141 | 2.35e-34 | 124 |
MS.gene031060.t1 | MTR_8g094580 | 57.426 | 101 | 40 | 2 | 72 | 170 | 5 | 104 | 9.68e-34 | 124 |
MS.gene031060.t1 | MTR_4g052620 | 38.728 | 173 | 97 | 5 | 20 | 184 | 5 | 176 | 2.36e-33 | 124 |
MS.gene031060.t1 | MTR_8g023860 | 48.462 | 130 | 61 | 4 | 20 | 144 | 12 | 140 | 3.77e-32 | 124 |
MS.gene031060.t1 | MTR_2g086690 | 40.385 | 156 | 85 | 4 | 21 | 168 | 5 | 160 | 4.88e-31 | 117 |
MS.gene031060.t1 | MTR_7g105170 | 38.415 | 164 | 91 | 5 | 20 | 173 | 4 | 167 | 1.97e-30 | 116 |
MS.gene031060.t1 | MTR_8g023900 | 42.038 | 157 | 80 | 6 | 20 | 171 | 12 | 162 | 4.86e-29 | 116 |
MS.gene031060.t1 | MTR_8g023900 | 39.634 | 164 | 75 | 7 | 20 | 170 | 188 | 340 | 5.17e-28 | 113 |
MS.gene031060.t1 | MTR_8g023930 | 39.490 | 157 | 82 | 5 | 20 | 171 | 24 | 172 | 2.16e-28 | 114 |
MS.gene031060.t1 | MTR_8g023880 | 43.056 | 144 | 60 | 6 | 20 | 144 | 7 | 147 | 2.35e-27 | 108 |
MS.gene031060.t1 | MTR_4g094302 | 38.854 | 157 | 82 | 3 | 20 | 170 | 11 | 159 | 3.79e-27 | 105 |
MS.gene031060.t1 | MTR_4g094302 | 39.844 | 128 | 67 | 2 | 20 | 145 | 11 | 130 | 1.88e-24 | 97.4 |
MS.gene031060.t1 | MTR_7g070140 | 50.000 | 80 | 38 | 1 | 73 | 150 | 17 | 96 | 3.52e-22 | 90.9 |
MS.gene031060.t1 | MTR_8g093790 | 38.415 | 164 | 76 | 7 | 14 | 177 | 4 | 142 | 1.88e-21 | 90.1 |
MS.gene031060.t1 | MTR_7g083360 | 33.094 | 139 | 87 | 4 | 14 | 149 | 4 | 139 | 5.45e-18 | 80.1 |
MS.gene031060.t1 | MTR_7g083330 | 31.818 | 154 | 99 | 5 | 4 | 154 | 2 | 152 | 2.26e-17 | 79.3 |
MS.gene031060.t1 | MTR_3g096400 | 31.667 | 180 | 104 | 5 | 16 | 185 | 3 | 173 | 6.78e-17 | 78.2 |
MS.gene031060.t1 | MTR_7g083370 | 33.793 | 145 | 82 | 6 | 11 | 150 | 5 | 140 | 5.76e-16 | 73.9 |
MS.gene031060.t1 | MTR_4g088245 | 34.266 | 143 | 75 | 5 | 20 | 145 | 68 | 208 | 9.79e-14 | 71.2 |
MS.gene031060.t1 | MTR_8g069160 | 33.566 | 143 | 76 | 5 | 20 | 145 | 68 | 208 | 2.63e-13 | 69.3 |
MS.gene031060.t1 | MTR_4g078875 | 32.867 | 143 | 78 | 4 | 20 | 145 | 48 | 189 | 3.17e-13 | 69.3 |
MS.gene031060.t1 | MTR_7g070150 | 45.455 | 55 | 25 | 1 | 116 | 170 | 8 | 57 | 1.37e-11 | 60.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031060.t1 | AT5G61430 | 51.471 | 340 | 118 | 8 | 15 | 321 | 11 | 336 | 3.86e-107 | 316 |
MS.gene031060.t1 | AT5G07680 | 55.830 | 283 | 107 | 6 | 13 | 293 | 10 | 276 | 1.02e-102 | 304 |
MS.gene031060.t1 | AT5G07680 | 52.117 | 307 | 124 | 8 | 19 | 321 | 2 | 289 | 1.63e-100 | 298 |
MS.gene031060.t1 | AT3G29035 | 61.446 | 249 | 64 | 6 | 12 | 250 | 16 | 242 | 1.97e-98 | 293 |
MS.gene031060.t1 | AT5G39610 | 64.732 | 224 | 67 | 3 | 12 | 234 | 12 | 224 | 1.94e-97 | 289 |
MS.gene031060.t1 | AT5G18270 | 62.255 | 204 | 63 | 3 | 11 | 200 | 12 | 215 | 2.71e-86 | 263 |
MS.gene031060.t1 | AT5G18270 | 61.765 | 204 | 64 | 3 | 11 | 200 | 12 | 215 | 1.01e-85 | 261 |
MS.gene031060.t1 | AT3G04060 | 64.062 | 192 | 60 | 3 | 16 | 198 | 16 | 207 | 6.22e-83 | 254 |
MS.gene031060.t1 | AT3G18400 | 50.181 | 277 | 112 | 6 | 20 | 282 | 5 | 269 | 4.35e-81 | 249 |
MS.gene031060.t1 | AT5G53950 | 68.293 | 164 | 50 | 1 | 20 | 181 | 17 | 180 | 4.60e-79 | 246 |
MS.gene031060.t1 | AT5G61430 | 47.203 | 286 | 104 | 8 | 69 | 321 | 2 | 273 | 4.00e-73 | 227 |
MS.gene031060.t1 | AT1G76420 | 61.364 | 176 | 61 | 3 | 1 | 172 | 1 | 173 | 1.94e-72 | 227 |
MS.gene031060.t1 | AT3G15170 | 67.308 | 156 | 49 | 1 | 20 | 173 | 20 | 175 | 5.53e-72 | 225 |
MS.gene031060.t1 | AT2G24430 | 58.621 | 174 | 67 | 2 | 5 | 176 | 1 | 171 | 1.24e-69 | 219 |
MS.gene031060.t1 | AT2G24430 | 58.621 | 174 | 67 | 2 | 5 | 176 | 1 | 171 | 1.24e-69 | 219 |
MS.gene031060.t1 | AT1G56010 | 50.704 | 213 | 92 | 5 | 19 | 220 | 18 | 228 | 6.27e-66 | 210 |
MS.gene031060.t1 | AT3G12977 | 43.373 | 249 | 127 | 7 | 2 | 250 | 1 | 235 | 1.49e-64 | 205 |
MS.gene031060.t1 | AT3G04070 | 51.724 | 174 | 70 | 4 | 12 | 173 | 2 | 173 | 3.02e-58 | 191 |
MS.gene031060.t1 | AT1G01720 | 41.107 | 253 | 134 | 6 | 16 | 264 | 3 | 244 | 2.27e-57 | 187 |
MS.gene031060.t1 | AT4G27410 | 52.147 | 163 | 76 | 1 | 17 | 179 | 11 | 171 | 3.35e-57 | 187 |
MS.gene031060.t1 | AT4G10350 | 58.442 | 154 | 59 | 2 | 20 | 170 | 9 | 160 | 3.66e-56 | 186 |
MS.gene031060.t1 | AT5G66300 | 44.292 | 219 | 104 | 5 | 11 | 216 | 3 | 216 | 7.46e-56 | 183 |
MS.gene031060.t1 | AT3G04070 | 47.368 | 190 | 70 | 4 | 12 | 173 | 2 | 189 | 1.39e-55 | 184 |
MS.gene031060.t1 | AT1G69490 | 44.000 | 200 | 97 | 2 | 20 | 217 | 9 | 195 | 1.75e-55 | 181 |
MS.gene031060.t1 | AT3G15500 | 51.497 | 167 | 79 | 2 | 17 | 183 | 11 | 175 | 3.47e-55 | 182 |
MS.gene031060.t1 | AT2G18060 | 51.497 | 167 | 74 | 3 | 12 | 175 | 1 | 163 | 4.05e-55 | 184 |
MS.gene031060.t1 | AT2G18060 | 51.497 | 167 | 74 | 3 | 12 | 175 | 1 | 163 | 4.05e-55 | 184 |
MS.gene031060.t1 | AT1G33280 | 55.975 | 159 | 62 | 2 | 20 | 175 | 8 | 161 | 1.15e-54 | 181 |
MS.gene031060.t1 | AT1G77450 | 51.807 | 166 | 78 | 2 | 12 | 176 | 2 | 166 | 1.63e-54 | 179 |
MS.gene031060.t1 | AT4G36160 | 54.088 | 159 | 66 | 3 | 15 | 170 | 9 | 163 | 1.96e-54 | 182 |
MS.gene031060.t1 | AT4G36160 | 54.088 | 159 | 66 | 3 | 15 | 170 | 5 | 159 | 2.04e-54 | 182 |
MS.gene031060.t1 | AT4G36160 | 54.088 | 159 | 66 | 3 | 15 | 170 | 5 | 159 | 2.04e-54 | 182 |
MS.gene031060.t1 | AT1G52890 | 53.750 | 160 | 72 | 2 | 17 | 176 | 11 | 168 | 2.89e-54 | 180 |
MS.gene031060.t1 | AT1G12260 | 55.844 | 154 | 61 | 3 | 20 | 170 | 7 | 156 | 3.93e-54 | 180 |
MS.gene031060.t1 | AT1G12260 | 55.844 | 154 | 61 | 3 | 20 | 170 | 7 | 156 | 6.03e-54 | 181 |
MS.gene031060.t1 | AT1G65910 | 53.049 | 164 | 71 | 3 | 20 | 180 | 6 | 166 | 6.56e-54 | 186 |
MS.gene031060.t1 | AT3G10490 | 54.140 | 157 | 69 | 2 | 20 | 174 | 27 | 182 | 7.34e-54 | 176 |
MS.gene031060.t1 | AT3G03200 | 55.975 | 159 | 55 | 3 | 20 | 170 | 6 | 157 | 7.96e-54 | 183 |
MS.gene031060.t1 | AT2G46770 | 45.455 | 187 | 88 | 3 | 5 | 177 | 1 | 187 | 1.14e-53 | 180 |
MS.gene031060.t1 | AT1G71930 | 51.299 | 154 | 68 | 2 | 20 | 170 | 9 | 158 | 1.49e-53 | 178 |
MS.gene031060.t1 | AT1G71930 | 51.299 | 154 | 68 | 2 | 20 | 170 | 9 | 158 | 1.49e-53 | 178 |
MS.gene031060.t1 | AT5G08790 | 52.121 | 165 | 75 | 2 | 20 | 181 | 7 | 170 | 2.24e-53 | 176 |
MS.gene031060.t1 | AT3G17730 | 54.194 | 155 | 67 | 2 | 20 | 172 | 6 | 158 | 2.37e-53 | 175 |
MS.gene031060.t1 | AT4G28530 | 43.836 | 219 | 83 | 6 | 19 | 205 | 9 | 219 | 2.71e-53 | 178 |
MS.gene031060.t1 | AT1G62700 | 54.839 | 155 | 63 | 3 | 19 | 170 | 6 | 156 | 3.62e-53 | 179 |
MS.gene031060.t1 | AT1G62700 | 54.839 | 155 | 63 | 3 | 19 | 170 | 6 | 156 | 3.62e-53 | 179 |
MS.gene031060.t1 | AT5G62380 | 53.896 | 154 | 64 | 3 | 20 | 170 | 7 | 156 | 3.71e-53 | 178 |
MS.gene031060.t1 | AT5G62380 | 53.896 | 154 | 64 | 3 | 20 | 170 | 7 | 156 | 3.71e-53 | 178 |
MS.gene031060.t1 | AT3G61910 | 45.304 | 181 | 85 | 2 | 11 | 177 | 2 | 182 | 7.62e-53 | 177 |
MS.gene031060.t1 | AT4G27410 | 47.222 | 180 | 76 | 2 | 17 | 179 | 11 | 188 | 9.72e-53 | 176 |
MS.gene031060.t1 | AT1G61110 | 47.458 | 177 | 82 | 3 | 19 | 184 | 15 | 191 | 1.70e-52 | 176 |
MS.gene031060.t1 | AT3G10500 | 52.795 | 161 | 68 | 3 | 20 | 176 | 9 | 165 | 1.80e-52 | 181 |
MS.gene031060.t1 | AT3G10490 | 54.140 | 157 | 69 | 2 | 20 | 174 | 27 | 182 | 2.20e-52 | 179 |
MS.gene031060.t1 | AT5G17260 | 54.088 | 159 | 58 | 3 | 20 | 170 | 6 | 157 | 2.38e-52 | 179 |
MS.gene031060.t1 | AT1G32770 | 48.634 | 183 | 81 | 3 | 5 | 175 | 1 | 182 | 2.38e-52 | 176 |
MS.gene031060.t1 | AT1G26870 | 52.601 | 173 | 71 | 3 | 10 | 171 | 4 | 176 | 3.28e-52 | 177 |
MS.gene031060.t1 | AT3G10480 | 54.777 | 157 | 67 | 2 | 20 | 174 | 27 | 181 | 3.94e-52 | 178 |
MS.gene031060.t1 | AT5G04410 | 52.795 | 161 | 68 | 3 | 20 | 176 | 9 | 165 | 5.04e-52 | 180 |
MS.gene031060.t1 | AT2G33480 | 52.410 | 166 | 73 | 3 | 5 | 170 | 1 | 160 | 5.12e-52 | 172 |
MS.gene031060.t1 | AT3G10480 | 54.140 | 157 | 69 | 2 | 20 | 174 | 27 | 182 | 7.57e-52 | 177 |
MS.gene031060.t1 | AT5G39820 | 47.938 | 194 | 77 | 5 | 1 | 173 | 4 | 194 | 1.18e-51 | 174 |
MS.gene031060.t1 | AT2G33480 | 51.786 | 168 | 69 | 4 | 5 | 170 | 1 | 158 | 1.27e-51 | 171 |
MS.gene031060.t1 | AT1G79580 | 51.190 | 168 | 69 | 4 | 9 | 170 | 6 | 166 | 2.08e-51 | 174 |
MS.gene031060.t1 | AT1G79580 | 51.190 | 168 | 69 | 4 | 9 | 170 | 6 | 166 | 2.08e-51 | 174 |
MS.gene031060.t1 | AT1G79580 | 51.190 | 168 | 69 | 4 | 9 | 170 | 6 | 166 | 2.08e-51 | 174 |
MS.gene031060.t1 | AT1G79580 | 51.190 | 168 | 69 | 4 | 9 | 170 | 6 | 166 | 2.08e-51 | 174 |
MS.gene031060.t1 | AT1G79580 | 51.190 | 168 | 69 | 4 | 9 | 170 | 6 | 166 | 2.08e-51 | 174 |
MS.gene031060.t1 | AT1G33060 | 54.194 | 155 | 67 | 2 | 20 | 172 | 24 | 176 | 7.57e-51 | 178 |
MS.gene031060.t1 | AT5G63790 | 51.875 | 160 | 73 | 2 | 20 | 176 | 50 | 208 | 7.70e-51 | 171 |
MS.gene031060.t1 | AT5G63790 | 51.875 | 160 | 73 | 2 | 20 | 176 | 60 | 218 | 8.24e-51 | 171 |
MS.gene031060.t1 | AT1G33060 | 54.194 | 155 | 67 | 2 | 20 | 172 | 24 | 176 | 8.45e-51 | 178 |
MS.gene031060.t1 | AT2G43000 | 49.686 | 159 | 78 | 2 | 13 | 170 | 10 | 167 | 1.12e-50 | 169 |
MS.gene031060.t1 | AT1G54330 | 55.844 | 154 | 59 | 3 | 20 | 170 | 6 | 153 | 1.82e-50 | 169 |
MS.gene031060.t1 | AT4G35580 | 54.248 | 153 | 66 | 2 | 20 | 170 | 9 | 159 | 1.54e-49 | 172 |
MS.gene031060.t1 | AT4G35580 | 54.248 | 153 | 66 | 2 | 20 | 170 | 9 | 159 | 1.74e-49 | 173 |
MS.gene031060.t1 | AT4G35580 | 54.248 | 153 | 66 | 2 | 20 | 170 | 9 | 159 | 1.80e-49 | 172 |
MS.gene031060.t1 | AT5G46590 | 50.602 | 166 | 78 | 3 | 20 | 182 | 6 | 170 | 1.92e-49 | 167 |
MS.gene031060.t1 | AT5G13180 | 50.932 | 161 | 71 | 4 | 18 | 176 | 12 | 166 | 1.49e-48 | 163 |
MS.gene031060.t1 | AT5G46590 | 58.779 | 131 | 51 | 2 | 20 | 147 | 6 | 136 | 4.81e-48 | 162 |
MS.gene031060.t1 | AT4G17980 | 51.613 | 155 | 71 | 2 | 20 | 170 | 6 | 160 | 5.73e-48 | 162 |
MS.gene031060.t1 | AT4G17980 | 51.613 | 155 | 71 | 2 | 20 | 170 | 6 | 160 | 7.02e-48 | 162 |
MS.gene031060.t1 | AT3G15510 | 45.181 | 166 | 78 | 3 | 24 | 177 | 21 | 185 | 3.01e-47 | 163 |
MS.gene031060.t1 | AT3G12910 | 46.196 | 184 | 82 | 6 | 8 | 176 | 10 | 191 | 7.28e-46 | 157 |
MS.gene031060.t1 | AT2G02450 | 50.980 | 153 | 70 | 2 | 22 | 173 | 53 | 201 | 1.20e-45 | 159 |
MS.gene031060.t1 | AT2G17040 | 36.864 | 236 | 112 | 3 | 22 | 254 | 8 | 209 | 1.23e-45 | 156 |
MS.gene031060.t1 | AT3G10480 | 44.737 | 190 | 69 | 2 | 20 | 174 | 27 | 215 | 1.60e-45 | 162 |
MS.gene031060.t1 | AT2G02450 | 50.980 | 153 | 70 | 2 | 22 | 173 | 53 | 201 | 1.81e-45 | 159 |
MS.gene031060.t1 | AT1G56010 | 50.000 | 162 | 69 | 4 | 69 | 220 | 2 | 161 | 1.18e-44 | 153 |
MS.gene031060.t1 | AT3G49530 | 51.613 | 155 | 68 | 4 | 20 | 170 | 13 | 164 | 2.30e-44 | 156 |
MS.gene031060.t1 | AT3G49530 | 51.613 | 155 | 68 | 4 | 20 | 170 | 13 | 164 | 9.26e-44 | 156 |
MS.gene031060.t1 | AT1G34180 | 45.223 | 157 | 82 | 2 | 22 | 176 | 18 | 172 | 9.95e-44 | 155 |
MS.gene031060.t1 | AT5G64060 | 42.515 | 167 | 90 | 3 | 17 | 180 | 3 | 166 | 1.25e-43 | 153 |
MS.gene031060.t1 | AT5G09330 | 44.311 | 167 | 87 | 3 | 17 | 180 | 3 | 166 | 1.55e-43 | 156 |
MS.gene031060.t1 | AT5G09330 | 44.311 | 167 | 87 | 3 | 17 | 180 | 3 | 166 | 1.55e-43 | 156 |
MS.gene031060.t1 | AT5G09330 | 44.311 | 167 | 87 | 3 | 17 | 180 | 3 | 166 | 1.55e-43 | 156 |
MS.gene031060.t1 | AT5G09330 | 44.311 | 167 | 87 | 3 | 17 | 180 | 3 | 166 | 1.55e-43 | 156 |
MS.gene031060.t1 | AT5G09330 | 44.311 | 167 | 87 | 3 | 17 | 180 | 3 | 166 | 1.55e-43 | 156 |
MS.gene031060.t1 | AT1G52880 | 46.875 | 160 | 73 | 3 | 24 | 172 | 21 | 179 | 2.59e-43 | 151 |
MS.gene031060.t1 | AT5G24590 | 50.943 | 159 | 63 | 4 | 20 | 170 | 13 | 164 | 3.05e-43 | 154 |
MS.gene031060.t1 | AT1G34180 | 45.223 | 157 | 82 | 2 | 22 | 176 | 18 | 172 | 8.40e-43 | 155 |
MS.gene031060.t1 | AT1G34190 | 44.586 | 157 | 83 | 2 | 22 | 176 | 18 | 172 | 4.71e-42 | 153 |
MS.gene031060.t1 | AT3G12977 | 43.407 | 182 | 90 | 6 | 69 | 250 | 14 | 182 | 1.50e-41 | 144 |
MS.gene031060.t1 | AT1G34180 | 42.012 | 169 | 82 | 2 | 22 | 176 | 18 | 184 | 1.55e-41 | 150 |
MS.gene031060.t1 | AT1G32510 | 46.584 | 161 | 76 | 3 | 20 | 171 | 6 | 165 | 6.96e-41 | 144 |
MS.gene031060.t1 | AT1G34180 | 42.012 | 169 | 82 | 2 | 22 | 176 | 18 | 184 | 9.47e-41 | 150 |
MS.gene031060.t1 | AT2G27300 | 34.818 | 247 | 137 | 6 | 20 | 256 | 14 | 246 | 1.87e-40 | 144 |
MS.gene031060.t1 | AT1G32870 | 45.455 | 165 | 86 | 2 | 14 | 176 | 4 | 166 | 6.44e-39 | 144 |
MS.gene031060.t1 | AT1G32870 | 45.455 | 165 | 86 | 2 | 14 | 176 | 4 | 166 | 7.21e-39 | 144 |
MS.gene031060.t1 | AT1G32870 | 45.455 | 165 | 86 | 2 | 14 | 176 | 40 | 202 | 1.31e-38 | 144 |
MS.gene031060.t1 | AT5G22290 | 48.780 | 123 | 62 | 1 | 22 | 143 | 23 | 145 | 7.37e-37 | 135 |
MS.gene031060.t1 | AT3G44290 | 46.259 | 147 | 69 | 3 | 22 | 167 | 16 | 153 | 7.42e-37 | 132 |
MS.gene031060.t1 | AT3G44290 | 46.259 | 147 | 69 | 3 | 22 | 167 | 16 | 153 | 4.05e-36 | 133 |
MS.gene031060.t1 | AT5G04395 | 46.479 | 142 | 60 | 2 | 20 | 145 | 28 | 169 | 1.96e-35 | 127 |
MS.gene031060.t1 | AT4G10350 | 61.224 | 98 | 36 | 1 | 73 | 170 | 18 | 113 | 8.89e-35 | 128 |
MS.gene031060.t1 | AT4G28530 | 33.180 | 217 | 72 | 4 | 19 | 205 | 9 | 182 | 1.23e-31 | 120 |
MS.gene031060.t1 | AT2G33480 | 56.122 | 98 | 41 | 1 | 73 | 170 | 8 | 103 | 1.61e-31 | 117 |
MS.gene031060.t1 | AT3G44350 | 39.264 | 163 | 92 | 4 | 19 | 175 | 4 | 165 | 5.60e-29 | 112 |
MS.gene031060.t1 | AT5G22380 | 38.217 | 157 | 90 | 4 | 19 | 168 | 4 | 160 | 2.17e-27 | 107 |
MS.gene031060.t1 | AT4G01550 | 38.608 | 158 | 84 | 4 | 23 | 174 | 7 | 157 | 3.35e-26 | 108 |
MS.gene031060.t1 | AT3G44350 | 39.583 | 144 | 81 | 3 | 19 | 156 | 4 | 147 | 2.52e-25 | 99.8 |
MS.gene031060.t1 | AT1G02230 | 38.312 | 154 | 79 | 6 | 21 | 167 | 4 | 148 | 2.56e-25 | 104 |
MS.gene031060.t1 | AT4G01520 | 39.394 | 132 | 73 | 4 | 21 | 145 | 5 | 136 | 6.14e-25 | 102 |
MS.gene031060.t1 | AT5G64530 | 36.145 | 166 | 80 | 4 | 20 | 171 | 3 | 156 | 8.65e-25 | 99.4 |
MS.gene031060.t1 | AT3G10490 | 56.098 | 82 | 35 | 1 | 93 | 174 | 2 | 82 | 2.31e-24 | 101 |
MS.gene031060.t1 | AT3G10490 | 56.098 | 82 | 35 | 1 | 93 | 174 | 2 | 82 | 2.31e-24 | 101 |
MS.gene031060.t1 | AT3G04420 | 33.005 | 203 | 117 | 6 | 18 | 213 | 1 | 191 | 2.68e-24 | 100 |
MS.gene031060.t1 | AT4G01540 | 40.769 | 130 | 70 | 4 | 23 | 145 | 7 | 136 | 3.42e-24 | 102 |
MS.gene031060.t1 | AT4G01540 | 40.769 | 130 | 70 | 4 | 23 | 145 | 7 | 136 | 4.41e-24 | 102 |
MS.gene031060.t1 | AT4G01540 | 40.769 | 130 | 70 | 4 | 23 | 145 | 7 | 136 | 4.69e-24 | 102 |
MS.gene031060.t1 | AT4G01540 | 40.769 | 130 | 70 | 4 | 23 | 145 | 7 | 136 | 5.01e-24 | 102 |
MS.gene031060.t1 | AT3G04420 | 33.005 | 203 | 117 | 6 | 18 | 213 | 1 | 191 | 6.92e-24 | 100 |
MS.gene031060.t1 | AT5G64530 | 39.231 | 130 | 65 | 3 | 20 | 147 | 3 | 120 | 3.74e-23 | 94.0 |
MS.gene031060.t1 | AT2G43000 | 46.667 | 90 | 47 | 1 | 81 | 170 | 1 | 89 | 4.23e-23 | 95.1 |
MS.gene031060.t1 | AT2G18060 | 53.846 | 78 | 32 | 2 | 98 | 175 | 2 | 75 | 4.75e-22 | 94.0 |
MS.gene031060.t1 | AT1G02250 | 37.013 | 154 | 81 | 6 | 21 | 167 | 4 | 148 | 1.62e-21 | 94.0 |
MS.gene031060.t1 | AT1G01010 | 33.333 | 159 | 81 | 6 | 23 | 167 | 6 | 153 | 2.41e-20 | 91.3 |
MS.gene031060.t1 | AT1G02220 | 37.692 | 130 | 74 | 3 | 18 | 143 | 1 | 127 | 8.90e-19 | 86.7 |
MS.gene031060.t1 | AT5G14000 | 33.540 | 161 | 97 | 4 | 19 | 176 | 14 | 167 | 7.69e-18 | 80.9 |
MS.gene031060.t1 | AT5G50820 | 32.948 | 173 | 86 | 8 | 20 | 177 | 17 | 174 | 8.56e-18 | 80.5 |
MS.gene031060.t1 | AT5G14000 | 33.824 | 136 | 86 | 2 | 19 | 152 | 14 | 147 | 3.47e-16 | 75.1 |
MS.gene031060.t1 | AT3G56530 | 30.435 | 138 | 93 | 2 | 14 | 148 | 46 | 183 | 1.47e-15 | 76.6 |
MS.gene031060.t1 | AT5G22290 | 60.000 | 45 | 18 | 0 | 99 | 143 | 2 | 46 | 1.30e-13 | 69.7 |
MS.gene031060.t1 | AT3G55210 | 29.518 | 166 | 95 | 6 | 18 | 168 | 9 | 167 | 4.01e-13 | 68.9 |
MS.gene031060.t1 | AT3G04430 | 32.824 | 131 | 76 | 3 | 26 | 144 | 6 | 136 | 6.74e-12 | 63.9 |
Find 52 sgRNAs with CRISPR-Local
Find 90 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGAATTGCCACCTGGATTT+AGG | 0.205368 | 6.2:+6813891 | MS.gene031060:CDS |
AAAACTCACCATAGCTCTTT+TGG | 0.230831 | 6.2:-6814572 | None:intergenic |
AAACTAGGGGTCCATGAAAT+AGG | 0.234681 | 6.2:-6815181 | None:intergenic |
CAACTGGTCTAAGGACAAAT+AGG | 0.295570 | 6.2:+6814368 | MS.gene031060:CDS |
ATAATATTTCCCCTATTTCA+TGG | 0.296230 | 6.2:+6815170 | MS.gene031060:CDS |
TATAGAGAGAAGATCCTAAT+TGG | 0.297643 | 6.2:+6814439 | MS.gene031060:CDS |
GAAAATGCATATTCAAGATT+TGG | 0.299487 | 6.2:+6814922 | MS.gene031060:CDS |
GGGCCACATGTGCTGGATAT+TGG | 0.304387 | 6.2:+6814389 | MS.gene031060:CDS |
TTGTGTAGGGAGGGCCAATA+TGG | 0.306694 | 6.2:+6814300 | MS.gene031060:intron |
TTGGTAAGGTTCAATTCAAT+TGG | 0.328231 | 6.2:+6814941 | MS.gene031060:CDS |
AGAACTTCTACCTCCATTGA+TGG | 0.332308 | 6.2:+6814967 | MS.gene031060:CDS |
TGATAATCATCAATTAGATT+TGG | 0.333906 | 6.2:-6815061 | None:intergenic |
GAAAATATCCAACTGGTCTA+AGG | 0.347016 | 6.2:+6814359 | MS.gene031060:CDS |
AACTAGGGGTCCATGAAATA+GGG | 0.365594 | 6.2:-6815180 | None:intergenic |
TAGAATATGTGTCTTCTAAT+CGG | 0.393158 | 6.2:-6814537 | None:intergenic |
ACAAATAGGGCCACATGTGC+TGG | 0.425347 | 6.2:+6814382 | MS.gene031060:CDS |
GAATATTCATCAGATTTAGT+AGG | 0.441485 | 6.2:+6815307 | MS.gene031060:CDS |
GGGGAAATATTATCATAAGA+AGG | 0.445793 | 6.2:-6815160 | None:intergenic |
TGCATATTCAAGATTTGGTA+AGG | 0.453479 | 6.2:+6814927 | MS.gene031060:CDS |
CTATTTGTCCTTAGACCAGT+TGG | 0.456676 | 6.2:-6814367 | None:intergenic |
AACTGGTCTAAGGACAAATA+GGG | 0.472128 | 6.2:+6814369 | MS.gene031060:CDS |
AATTTCCAACTTGTGTGGAT+TGG | 0.478402 | 6.2:-6815210 | None:intergenic |
TTTGAACAAGTGTGAACCTT+GGG | 0.484109 | 6.2:+6814006 | MS.gene031060:CDS |
GACAAAGACAACAACATAGT+TGG | 0.484199 | 6.2:+6815094 | MS.gene031060:CDS |
GGGAAATATTATCATAAGAA+GGG | 0.488533 | 6.2:-6815159 | None:intergenic |
GCTGGATATTGGAAGGCAAC+AGG | 0.490181 | 6.2:+6814400 | MS.gene031060:CDS |
GAGGGCCAATATGGGTGAAA+AGG | 0.519049 | 6.2:+6814309 | MS.gene031060:CDS |
GTGGATTGGTGTGACAAACT+AGG | 0.526473 | 6.2:-6815196 | None:intergenic |
TGGATTGGTGTGACAAACTA+GGG | 0.527133 | 6.2:-6815195 | None:intergenic |
GTTATGAGTTCTTCATCTGT+TGG | 0.527445 | 6.2:-6813920 | None:intergenic |
TCACACCAATCCACACAAGT+TGG | 0.527898 | 6.2:+6815205 | MS.gene031060:CDS |
AGGGACAGAAAATATCCAAC+TGG | 0.530281 | 6.2:+6814352 | MS.gene031060:CDS |
TTCTTCTTCAATAATTCCAT+AGG | 0.537995 | 6.2:-6815348 | None:intergenic |
ATTAATTATGATGGATGCAA+TGG | 0.548436 | 6.2:+6813832 | None:intergenic |
TACAAAGGAAGAGCTCCTAA+AGG | 0.554352 | 6.2:+6814484 | MS.gene031060:CDS |
AGATGAAATGTCAACATCAA+AGG | 0.558054 | 6.2:-6815239 | None:intergenic |
TGTGTAGGGAGGGCCAATAT+GGG | 0.558995 | 6.2:+6814301 | MS.gene031060:intron |
GTTGGATGAAACCTAAATCC+AGG | 0.563929 | 6.2:-6813902 | None:intergenic |
AAATGTATCCAAAAGAGCTA+TGG | 0.569420 | 6.2:+6814564 | MS.gene031060:CDS |
CTTCCAATATCCAGCACATG+TGG | 0.571320 | 6.2:-6814392 | None:intergenic |
TATGGTGAAGAATCCATCAA+TGG | 0.573361 | 6.2:-6814980 | None:intergenic |
GAATATGAAGATGTTAACAT+AGG | 0.580802 | 6.2:-6815130 | None:intergenic |
TTGTGAATTTCCAACTTGTG+TGG | 0.588924 | 6.2:-6815215 | None:intergenic |
CACATGTGCTGGATATTGGA+AGG | 0.589625 | 6.2:+6814393 | MS.gene031060:CDS |
GTTCAAATCAGCTTCACCAA+TGG | 0.595043 | 6.2:-6813990 | None:intergenic |
ATTTGAACAAGTGTGAACCT+TGG | 0.620030 | 6.2:+6814005 | MS.gene031060:CDS |
ACTAGGGGTCCATGAAATAG+GGG | 0.620610 | 6.2:-6815179 | None:intergenic |
TACTTACAAGGCAAATCCCA+AGG | 0.621454 | 6.2:-6814022 | None:intergenic |
CCAATATGGGTGAAAAGGAG+TGG | 0.638048 | 6.2:+6814314 | MS.gene031060:CDS |
GGTGAAGAATCCATCAATGG+AGG | 0.665572 | 6.2:-6814977 | None:intergenic |
GGATGAAACCTAAATCCAGG+TGG | 0.732405 | 6.2:-6813899 | None:intergenic |
GGATTGGTGTGACAAACTAG+GGG | 0.753969 | 6.2:-6815194 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAAATTAAATCCAAATTAT+AGG | - | chr6.2:6814835-6814854 | None:intergenic | 10.0% |
!!! | TTTTTTAAGAGAAAAAAAAA+TGG | - | chr6.2:6814070-6814089 | None:intergenic | 10.0% |
!! | ACTATAGTGAAAAAATTATA+GGG | - | chr6.2:6814601-6814620 | None:intergenic | 15.0% |
!! | TACTATAGTGAAAAAATTAT+AGG | - | chr6.2:6814602-6814621 | None:intergenic | 15.0% |
!!! | TATTTTTTCTTAATTGTGTA+GGG | + | chr6.2:6814287-6814306 | MS.gene031060:intron | 15.0% |
!! | AGAAAAAAAAATGGAATCAA+AGG | - | chr6.2:6814061-6814080 | None:intergenic | 20.0% |
!! | ATAGAAAACAAATATTATCG+TGG | - | chr6.2:6814805-6814824 | None:intergenic | 20.0% |
!! | TAAAGGTGAAAAAACAAATT+GGG | + | chr6.2:6814501-6814520 | MS.gene031060:CDS | 20.0% |
!! | TGATAATCATCAATTAGATT+TGG | - | chr6.2:6815064-6815083 | None:intergenic | 20.0% |
!!! | AATTTTTTCACTATAGTACT+AGG | + | chr6.2:6814604-6814623 | MS.gene031060:intron | 20.0% |
!!! | CTATACTTTTACCTATAATT+TGG | + | chr6.2:6814821-6814840 | MS.gene031060:intron | 20.0% |
!!! | CTATTTTTTCTTAATTGTGT+AGG | + | chr6.2:6814286-6814305 | MS.gene031060:intron | 20.0% |
!!! | TGTTTTTTTTTTCTTTCAGA+AGG | + | chr6.2:6814856-6814875 | MS.gene031060:intron | 20.0% |
!!! | TTAGTATCGAGTTTTTAAAT+CGG | + | chr6.2:6814092-6814111 | MS.gene031060:intron | 20.0% |
! | AATGAGAAGAAATACTTACA+AGG | - | chr6.2:6814037-6814056 | None:intergenic | 25.0% |
! | ATAATATTTCCCCTATTTCA+TGG | + | chr6.2:6815170-6815189 | MS.gene031060:CDS | 25.0% |
! | CTAAAGGTGAAAAAACAAAT+TGG | + | chr6.2:6814500-6814519 | MS.gene031060:CDS | 25.0% |
! | GAAAATGCATATTCAAGATT+TGG | + | chr6.2:6814922-6814941 | MS.gene031060:CDS | 25.0% |
! | GAATATGAAGATGTTAACAT+AGG | - | chr6.2:6815133-6815152 | None:intergenic | 25.0% |
! | GAATATTCATCAGATTTAGT+AGG | + | chr6.2:6815307-6815326 | MS.gene031060:CDS | 25.0% |
! | GGGAAATATTATCATAAGAA+GGG | - | chr6.2:6815162-6815181 | None:intergenic | 25.0% |
! | TAGAATATGTGTCTTCTAAT+CGG | - | chr6.2:6814540-6814559 | None:intergenic | 25.0% |
!!! | AAAACACTTGTTTTCTACAA+AGG | + | chr6.2:6814469-6814488 | MS.gene031060:CDS | 25.0% |
!!! | CAATTTGTTTTTTCACCTTT+AGG | - | chr6.2:6814502-6814521 | None:intergenic | 25.0% |
!!! | TATTAAGAACTTTTTGAGAG+AGG | - | chr6.2:6813952-6813971 | None:intergenic | 25.0% |
AAATGTATCCAAAAGAGCTA+TGG | + | chr6.2:6814564-6814583 | MS.gene031060:CDS | 30.0% | |
ACTAGGTGAAGTTGAATAAT+CGG | + | chr6.2:6814621-6814640 | MS.gene031060:intron | 30.0% | |
AGATGAAATGTCAACATCAA+AGG | - | chr6.2:6815242-6815261 | None:intergenic | 30.0% | |
GGGGAAATATTATCATAAGA+AGG | - | chr6.2:6815163-6815182 | None:intergenic | 30.0% | |
TATAGAGAGAAGATCCTAAT+TGG | + | chr6.2:6814439-6814458 | MS.gene031060:CDS | 30.0% | |
TTGGTAAGGTTCAATTCAAT+TGG | + | chr6.2:6814941-6814960 | MS.gene031060:CDS | 30.0% | |
! | GTGTTTTCTTCATTCCAATT+AGG | - | chr6.2:6814456-6814475 | None:intergenic | 30.0% |
! | TGCATATTCAAGATTTGGTA+AGG | + | chr6.2:6814927-6814946 | MS.gene031060:CDS | 30.0% |
! | TTTTCTTAATTGTGTAGGGA+GGG | + | chr6.2:6814291-6814310 | MS.gene031060:intron | 30.0% |
! | TTTTTCTTAATTGTGTAGGG+AGG | + | chr6.2:6814290-6814309 | MS.gene031060:intron | 30.0% |
!! | GCTTTTGTTTCACTATTGTA+TGG | - | chr6.2:6815001-6815020 | None:intergenic | 30.0% |
!! | GTTTTTGAGAAAAGTTCTTG+TGG | + | chr6.2:6814896-6814915 | MS.gene031060:CDS | 30.0% |
!! | TTAGTAGGACATTTTGACAA+TGG | + | chr6.2:6815322-6815341 | MS.gene031060:CDS | 30.0% |
!!! | GAATAATCGGTTTTAAATCG+TGG | + | chr6.2:6814634-6814653 | MS.gene031060:intron | 30.0% |
!!! | TTTTTTTCTTTCAGAAGGAG+TGG | + | chr6.2:6814861-6814880 | MS.gene031060:intron | 30.0% |
AATTTCCAACTTGTGTGGAT+TGG | - | chr6.2:6815213-6815232 | None:intergenic | 35.0% | |
ACAATTGCAGGATGCAATTA+TGG | + | chr6.2:6814759-6814778 | MS.gene031060:intron | 35.0% | |
ATTTGAACAAGTGTGAACCT+TGG | + | chr6.2:6814005-6814024 | MS.gene031060:CDS | 35.0% | |
GAAAAATTTGAATTGCCACC+TGG | + | chr6.2:6813884-6813903 | MS.gene031060:CDS | 35.0% | |
GACAAAGACAACAACATAGT+TGG | + | chr6.2:6815094-6815113 | MS.gene031060:CDS | 35.0% | |
GTTATGAGTTCTTCATCTGT+TGG | - | chr6.2:6813923-6813942 | None:intergenic | 35.0% | |
TATGGTGAAGAATCCATCAA+TGG | - | chr6.2:6814983-6815002 | None:intergenic | 35.0% | |
TTGTGAATTTCCAACTTGTG+TGG | - | chr6.2:6815218-6815237 | None:intergenic | 35.0% | |
TTTGAACAAGTGTGAACCTT+GGG | + | chr6.2:6814006-6814025 | MS.gene031060:CDS | 35.0% | |
! | AAAACTCACCATAGCTCTTT+TGG | - | chr6.2:6814575-6814594 | None:intergenic | 35.0% |
! | AACTGGTCTAAGGACAAATA+GGG | + | chr6.2:6814369-6814388 | MS.gene031060:CDS | 35.0% |
! | GAAAATATCCAACTGGTCTA+AGG | + | chr6.2:6814359-6814378 | MS.gene031060:CDS | 35.0% |
! | TCTTTTTGTGCTATAGCCAT+TGG | + | chr6.2:6813974-6813993 | MS.gene031060:CDS | 35.0% |
!! | ATTTTGACAATGGTTGCCTA+TGG | + | chr6.2:6815332-6815351 | MS.gene031060:CDS | 35.0% |
!!! | AGTGGTATTTTTTCTGTGTG+AGG | + | chr6.2:6814332-6814351 | MS.gene031060:CDS | 35.0% |
!!! | GTGGTATTTTTTCTGTGTGA+GGG | + | chr6.2:6814333-6814352 | MS.gene031060:CDS | 35.0% |
AAACTAGGGGTCCATGAAAT+AGG | - | chr6.2:6815184-6815203 | None:intergenic | 40.0% | |
AACTAGGGGTCCATGAAATA+GGG | - | chr6.2:6815183-6815202 | None:intergenic | 40.0% | |
AGAACTTCTACCTCCATTGA+TGG | + | chr6.2:6814967-6814986 | MS.gene031060:CDS | 40.0% | |
AGGGACAGAAAATATCCAAC+TGG | + | chr6.2:6814352-6814371 | MS.gene031060:CDS | 40.0% | |
ATCGATGTAGTCGAAATTGC+AGG | + | chr6.2:6814698-6814717 | MS.gene031060:intron | 40.0% | |
CATCCTGCAATTGTAATTGC+GGG | - | chr6.2:6814753-6814772 | None:intergenic | 40.0% | |
CTATTTGTCCTTAGACCAGT+TGG | - | chr6.2:6814370-6814389 | None:intergenic | 40.0% | |
GCATCCTGCAATTGTAATTG+CGG | - | chr6.2:6814754-6814773 | None:intergenic | 40.0% | |
GTTCAAATCAGCTTCACCAA+TGG | - | chr6.2:6813993-6814012 | None:intergenic | 40.0% | |
GTTGGATGAAACCTAAATCC+AGG | - | chr6.2:6813905-6813924 | None:intergenic | 40.0% | |
TACAAAGGAAGAGCTCCTAA+AGG | + | chr6.2:6814484-6814503 | MS.gene031060:CDS | 40.0% | |
TACTTACAAGGCAAATCCCA+AGG | - | chr6.2:6814025-6814044 | None:intergenic | 40.0% | |
TTGAATTGCCACCTGGATTT+AGG | + | chr6.2:6813891-6813910 | MS.gene031060:CDS | 40.0% | |
! | CAACTGGTCTAAGGACAAAT+AGG | + | chr6.2:6814368-6814387 | MS.gene031060:CDS | 40.0% |
!! | TGGATTGGTGTGACAAACTA+GGG | - | chr6.2:6815198-6815217 | None:intergenic | 40.0% |
!!! | TCGGTTTTAAATCGTGGTTG+AGG | + | chr6.2:6814640-6814659 | MS.gene031060:intron | 40.0% |
ACTAGGGGTCCATGAAATAG+GGG | - | chr6.2:6815182-6815201 | None:intergenic | 45.0% | |
CACATGTGCTGGATATTGGA+AGG | + | chr6.2:6814393-6814412 | MS.gene031060:CDS | 45.0% | |
CCAATATGGGTGAAAAGGAG+TGG | + | chr6.2:6814314-6814333 | MS.gene031060:CDS | 45.0% | |
CTTCCAATATCCAGCACATG+TGG | - | chr6.2:6814395-6814414 | None:intergenic | 45.0% | |
GGATGAAACCTAAATCCAGG+TGG | - | chr6.2:6813902-6813921 | None:intergenic | 45.0% | |
GGTATGCAATCGTGACATCA+AGG | + | chr6.2:6814113-6814132 | MS.gene031060:intron | 45.0% | |
GGTGAAGAATCCATCAATGG+AGG | - | chr6.2:6814980-6814999 | None:intergenic | 45.0% | |
TCACACCAATCCACACAAGT+TGG | + | chr6.2:6815205-6815224 | MS.gene031060:CDS | 45.0% | |
! | CCACTCCTTTTCACCCATAT+TGG | - | chr6.2:6814317-6814336 | None:intergenic | 45.0% |
! | GGATTGGTGTGACAAACTAG+GGG | - | chr6.2:6815197-6815216 | None:intergenic | 45.0% |
!! | GTGGATTGGTGTGACAAACT+AGG | - | chr6.2:6815199-6815218 | None:intergenic | 45.0% |
ACAAATAGGGCCACATGTGC+TGG | + | chr6.2:6814382-6814401 | MS.gene031060:CDS | 50.0% | |
GAGGGCCAATATGGGTGAAA+AGG | + | chr6.2:6814309-6814328 | MS.gene031060:CDS | 50.0% | |
GCTCCCGCAATTACAATTGC+AGG | + | chr6.2:6814747-6814766 | MS.gene031060:intron | 50.0% | |
GCTGGATATTGGAAGGCAAC+AGG | + | chr6.2:6814400-6814419 | MS.gene031060:CDS | 50.0% | |
TGTGTAGGGAGGGCCAATAT+GGG | + | chr6.2:6814301-6814320 | MS.gene031060:intron | 50.0% | |
TTGTGTAGGGAGGGCCAATA+TGG | + | chr6.2:6814300-6814319 | MS.gene031060:intron | 50.0% | |
GGGCCACATGTGCTGGATAT+TGG | + | chr6.2:6814389-6814408 | MS.gene031060:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.2 | gene | 6813839 | 6815363 | 6813839 | ID=MS.gene031060 |
chr6.2 | mRNA | 6813839 | 6815363 | 6813839 | ID=MS.gene031060.t1;Parent=MS.gene031060 |
chr6.2 | exon | 6813839 | 6814037 | 6813839 | ID=MS.gene031060.t1.exon1;Parent=MS.gene031060.t1 |
chr6.2 | CDS | 6813839 | 6814037 | 6813839 | ID=cds.MS.gene031060.t1;Parent=MS.gene031060.t1 |
chr6.2 | exon | 6814308 | 6814585 | 6814308 | ID=MS.gene031060.t1.exon2;Parent=MS.gene031060.t1 |
chr6.2 | CDS | 6814308 | 6814585 | 6814308 | ID=cds.MS.gene031060.t1;Parent=MS.gene031060.t1 |
chr6.2 | exon | 6814875 | 6815363 | 6814875 | ID=MS.gene031060.t1.exon3;Parent=MS.gene031060.t1 |
chr6.2 | CDS | 6814875 | 6815363 | 6814875 | ID=cds.MS.gene031060.t1;Parent=MS.gene031060.t1 |
Gene Sequence |
Protein sequence |