AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene031105

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene031105.t1 MTR_5g088610 40.176 341 144 9 21 327 10 324 2.60e-56 187
MS.gene031105.t1 MTR_1g085770 42.808 292 116 8 16 272 7 282 4.53e-54 180
MS.gene031105.t1 MTR_4g128190 41.762 261 113 8 16 273 7 231 1.25e-49 166
MS.gene031105.t1 MTR_4g128190 59.615 52 21 0 276 327 180 231 1.45e-11 63.9
MS.gene031105.t1 MTR_6g013135 41.852 270 95 8 98 346 143 371 4.19e-45 159
MS.gene031105.t1 MTR_5g062790 40.989 283 101 12 21 266 10 263 3.18e-44 154
MS.gene031105.t1 MTR_5g088640 37.931 290 84 10 21 273 13 243 9.88e-41 144
MS.gene031105.t1 MTR_5g088080 37.931 290 84 10 21 273 13 243 1.58e-40 143
MS.gene031105.t1 MTR_5g088150 37.931 290 84 10 21 273 13 243 1.58e-40 143
MS.gene031105.t1 MTR_5g488210 37.931 290 84 10 21 273 13 243 1.58e-40 143
MS.gene031105.t1 MTR_5g488170 43.192 213 72 8 21 196 13 213 3.74e-38 136
MS.gene031105.t1 MTR_3g052450 50.382 131 63 2 17 145 37 167 2.24e-36 138
MS.gene031105.t1 MTR_1g043050 36.986 219 128 5 17 227 9 225 1.59e-35 130
MS.gene031105.t1 MTR_5g029840 55.140 107 47 1 17 122 9 115 6.20e-35 130
MS.gene031105.t1 MTR_3g052430 55.660 106 46 1 20 124 41 146 1.31e-34 133
MS.gene031105.t1 MTR_2g089620 55.140 107 47 1 17 122 9 115 4.09e-34 128
MS.gene031105.t1 MTR_1g043080 53.271 107 49 1 17 122 9 115 1.67e-33 124
MS.gene031105.t1 MTR_2g011660 55.238 105 46 1 19 122 12 116 3.48e-33 126
MS.gene031105.t1 MTR_3g011610 49.138 116 56 2 12 124 27 142 4.54e-33 129
MS.gene031105.t1 MTR_8g042410 50.877 114 53 2 14 124 29 142 7.14e-33 128
MS.gene031105.t1 MTR_4g091490 54.286 105 47 1 19 122 12 116 1.30e-32 125
MS.gene031105.t1 MTR_7g076740 52.679 112 51 2 17 126 9 120 1.88e-32 123
MS.gene031105.t1 MTR_1g085880 43.617 188 72 5 16 169 7 194 2.79e-32 119
MS.gene031105.t1 MTR_0008s0390 49.524 105 52 1 19 122 12 116 7.09e-32 120
MS.gene031105.t1 MTR_7g096930 47.154 123 63 2 19 139 11 133 1.54e-31 120
MS.gene031105.t1 MTR_6g090405 53.333 105 47 2 20 122 12 116 1.87e-31 119
MS.gene031105.t1 MTR_2g097910 50.000 108 53 1 20 126 20 127 2.21e-31 120
MS.gene031105.t1 MTR_8g031360 52.830 106 48 2 19 122 12 117 2.79e-31 120
MS.gene031105.t1 MTR_0008s0470 48.571 105 53 1 19 122 12 116 3.32e-31 119
MS.gene031105.t1 MTR_0251s0050 48.571 105 53 1 19 122 12 116 4.40e-31 119
MS.gene031105.t1 MTR_1g076150 52.381 105 49 1 19 122 11 115 5.44e-31 118
MS.gene031105.t1 MTR_7g115650 47.788 113 58 1 19 130 11 123 5.51e-31 117
MS.gene031105.t1 MTR_1g085040 53.211 109 50 1 17 124 9 117 7.08e-31 120
MS.gene031105.t1 MTR_0140s0030 43.651 126 69 2 19 142 12 137 7.63e-31 119
MS.gene031105.t1 MTR_0489s0020 43.651 126 69 2 19 142 12 137 7.63e-31 119
MS.gene031105.t1 MTR_1g021230 53.774 106 48 1 20 124 57 162 7.64e-31 121
MS.gene031105.t1 MTR_5g007370 50.467 107 52 1 17 122 9 115 7.92e-31 119
MS.gene031105.t1 MTR_4g065017 45.528 123 66 1 5 126 2 124 9.31e-31 119
MS.gene031105.t1 MTR_1g100653 47.541 122 61 2 19 137 11 132 9.54e-31 118
MS.gene031105.t1 MTR_1g085640 53.211 109 50 1 17 124 9 117 1.40e-30 120
MS.gene031105.t1 MTR_1g110460 43.307 127 69 2 1 126 9 133 1.67e-30 118
MS.gene031105.t1 MTR_4g478180 50.467 107 52 1 17 122 10 116 2.45e-30 119
MS.gene031105.t1 MTR_2g088170 56.075 107 46 1 19 124 28 134 2.77e-30 120
MS.gene031105.t1 MTR_3g074520 48.598 107 54 1 17 122 9 115 5.37e-30 117
MS.gene031105.t1 MTR_7g110830 53.774 106 48 1 20 124 12 117 5.56e-30 118
MS.gene031105.t1 MTR_5g014990 41.379 145 81 3 20 160 12 156 1.11e-29 115
MS.gene031105.t1 MTR_2g089420 49.524 105 52 1 19 122 10 114 1.93e-29 117
MS.gene031105.t1 MTR_5g042030 51.429 105 50 1 19 122 6 110 2.16e-29 114
MS.gene031105.t1 MTR_1g062940 50.962 104 50 1 20 122 6 109 2.49e-29 112
MS.gene031105.t1 MTR_2g099740 48.718 117 56 2 17 132 9 122 3.00e-29 116
MS.gene031105.t1 MTR_7g111290 56.701 97 41 1 20 115 12 108 3.18e-29 116
MS.gene031105.t1 MTR_2g095520 49.242 132 63 3 20 147 12 143 4.20e-29 114
MS.gene031105.t1 MTR_3g028740 45.133 113 61 1 11 122 13 125 4.84e-29 115
MS.gene031105.t1 MTR_4g057635 53.333 105 47 2 20 122 12 116 4.85e-29 114
MS.gene031105.t1 MTR_2g064160 47.222 108 56 1 16 122 7 114 6.02e-29 114
MS.gene031105.t1 MTR_3g103570 46.154 130 59 4 20 139 12 140 6.95e-29 114
MS.gene031105.t1 MTR_8g017440 48.598 107 54 1 17 122 9 115 1.01e-28 114
MS.gene031105.t1 MTR_0008s0280 50.000 104 51 1 19 121 11 114 1.07e-28 111
MS.gene031105.t1 MTR_2g089450 50.000 104 51 1 19 121 11 114 1.20e-28 111
MS.gene031105.t1 MTR_3g461490 49.038 104 52 1 20 122 12 115 1.31e-28 113
MS.gene031105.t1 MTR_6g006030 43.796 137 70 3 6 141 2 132 1.38e-28 110
MS.gene031105.t1 MTR_3g065440 49.541 109 54 1 19 126 11 119 1.68e-28 112
MS.gene031105.t1 MTR_4g082290 32.727 220 134 4 19 237 11 217 1.73e-28 114
MS.gene031105.t1 MTR_6g012180 47.000 100 52 1 17 115 9 108 2.34e-28 112
MS.gene031105.t1 MTR_1g017000 49.524 105 51 2 20 122 12 116 2.41e-28 110
MS.gene031105.t1 MTR_5g078140 49.541 109 54 1 19 126 11 119 2.48e-28 112
MS.gene031105.t1 MTR_3g039990 43.860 114 63 1 19 131 12 125 2.66e-28 112
MS.gene031105.t1 MTR_4g102380 49.524 105 52 1 19 122 11 115 3.09e-28 111
MS.gene031105.t1 MTR_4g121460 50.476 105 51 1 19 122 11 115 3.27e-28 112
MS.gene031105.t1 MTR_7g010210 45.794 107 57 1 17 122 9 115 3.71e-28 110
MS.gene031105.t1 MTR_7g010210 45.794 107 57 1 17 122 9 115 3.94e-28 112
MS.gene031105.t1 MTR_3g077110 48.624 109 55 1 15 122 7 115 4.87e-28 112
MS.gene031105.t1 MTR_1g017140 50.893 112 51 3 20 129 12 121 5.40e-28 112
MS.gene031105.t1 MTR_7g087130 39.869 153 84 3 19 170 11 156 5.86e-28 112
MS.gene031105.t1 MTR_0063s0090 51.515 99 47 1 19 116 11 109 6.21e-28 109
MS.gene031105.t1 MTR_3g083540 51.020 98 47 1 19 115 40 137 7.24e-28 110
MS.gene031105.t1 MTR_4g097570 46.400 125 59 3 20 136 12 136 7.64e-28 110
MS.gene031105.t1 MTR_8g095390 54.737 95 42 1 22 115 14 108 7.76e-28 111
MS.gene031105.t1 MTR_8g017540 47.664 107 55 1 17 122 55 161 8.40e-28 112
MS.gene031105.t1 MTR_1g086530 45.872 109 58 1 20 127 33 141 8.45e-28 110
MS.gene031105.t1 MTR_7g011170 47.619 105 54 1 19 122 11 115 8.79e-28 110
MS.gene031105.t1 MTR_7g035075 45.614 114 61 1 15 127 9 122 1.00e-27 108
MS.gene031105.t1 MTR_4g105130 51.000 100 48 1 17 115 9 108 1.05e-27 111
MS.gene031105.t1 MTR_1g112760 47.706 109 56 1 15 122 8 116 1.17e-27 108
MS.gene031105.t1 MTR_8g017500 40.426 141 74 3 17 156 9 140 1.37e-27 111
MS.gene031105.t1 MTR_4g082230 32.420 219 134 4 20 237 12 217 1.38e-27 112
MS.gene031105.t1 MTR_2g034790 50.476 105 51 1 19 122 11 115 1.63e-27 110
MS.gene031105.t1 MTR_8g027345 41.600 125 72 1 19 142 11 135 2.02e-27 109
MS.gene031105.t1 MTR_1g073170 48.182 110 56 1 17 125 17 126 2.07e-27 108
MS.gene031105.t1 MTR_4g128670 53.061 98 44 2 20 115 12 109 2.18e-27 110
MS.gene031105.t1 MTR_1g083630 37.727 220 97 8 12 192 5 223 2.34e-27 113
MS.gene031105.t1 MTR_4g073420 49.524 105 52 1 22 125 14 118 3.75e-27 108
MS.gene031105.t1 MTR_4g029540 40.361 166 75 6 17 167 6 162 4.06e-27 108
MS.gene031105.t1 MTR_2g067420 52.577 97 45 1 20 115 14 110 4.36e-27 109
MS.gene031105.t1 MTR_8g098860 44.954 109 59 1 17 124 9 117 6.14e-27 108
MS.gene031105.t1 MTR_5g010020 48.000 100 51 1 17 115 9 108 8.76e-27 108
MS.gene031105.t1 MTR_1g086510 42.857 112 63 1 17 127 18 129 9.38e-27 107
MS.gene031105.t1 MTR_8g006470 43.590 117 64 2 12 126 2 118 1.10e-26 107
MS.gene031105.t1 MTR_4g019370 46.429 112 58 2 22 132 38 148 1.20e-26 108
MS.gene031105.t1 MTR_7g117730 44.144 111 61 1 19 128 11 121 1.28e-26 106
MS.gene031105.t1 MTR_6g012690 46.667 105 55 1 19 122 11 115 1.30e-26 108
MS.gene031105.t1 MTR_8g017340 47.706 109 55 2 16 122 8 116 1.53e-26 110
MS.gene031105.t1 MTR_8g017390 46.087 115 56 3 10 122 6 116 2.44e-26 109
MS.gene031105.t1 MTR_3g097450 52.632 95 44 1 22 115 14 108 2.51e-26 106
MS.gene031105.t1 MTR_4g097570 46.032 126 59 4 20 136 12 137 2.60e-26 106
MS.gene031105.t1 MTR_7g102110 48.571 105 52 2 20 122 12 116 3.20e-26 105
MS.gene031105.t1 MTR_4g100720 37.410 139 85 2 16 152 9 147 3.34e-26 103
MS.gene031105.t1 MTR_1g045610 41.667 132 75 2 12 141 13 144 3.92e-26 105
MS.gene031105.t1 MTR_5g079670 42.991 107 60 1 17 122 8 114 4.35e-26 103
MS.gene031105.t1 MTR_8g017350 46.789 109 56 2 16 122 8 116 5.07e-26 109
MS.gene031105.t1 MTR_8g020490 49.495 99 49 1 18 115 6 104 5.21e-26 104
MS.gene031105.t1 MTR_4g063100 43.636 110 61 1 21 129 8 117 1.18e-25 103
MS.gene031105.t1 MTR_6g009430 47.115 104 54 1 20 122 12 115 4.01e-25 104
MS.gene031105.t1 MTR_6g055910 44.828 116 60 2 21 132 15 130 4.19e-25 103
MS.gene031105.t1 MTR_5g079220 43.396 106 59 1 18 122 19 124 5.29e-25 102
MS.gene031105.t1 MTR_4g125520 40.517 116 68 1 16 130 8 123 5.68e-25 103
MS.gene031105.t1 MTR_1g100667 47.273 110 57 1 14 122 7 116 7.35e-25 102
MS.gene031105.t1 MTR_7g109320 54.082 98 44 1 19 115 11 108 9.40e-25 103
MS.gene031105.t1 MTR_2g096380 42.056 107 61 1 20 125 6 112 1.26e-24 100
MS.gene031105.t1 MTR_4g485530 43.103 116 63 2 22 134 14 129 1.57e-24 99.4
MS.gene031105.t1 MTR_5g079290 42.453 106 60 1 18 122 15 120 4.33e-24 99.8
MS.gene031105.t1 MTR_5g078950 42.308 104 59 1 18 120 5 108 5.46e-24 99.8
MS.gene031105.t1 MTR_5g078910 43.396 106 59 1 18 122 5 110 7.35e-24 100
MS.gene031105.t1 MTR_5g078860 43.396 106 59 1 18 122 5 110 8.70e-24 99.8
MS.gene031105.t1 MTR_6g074860 44.792 96 51 2 22 116 4 98 3.25e-23 97.1
MS.gene031105.t1 MTR_2g033170 40.310 129 70 2 6 127 4 132 4.90e-23 98.2
MS.gene031105.t1 MTR_5g078800 42.453 106 60 1 18 122 5 110 5.31e-23 97.1
MS.gene031105.t1 MTR_8g060940 43.434 99 55 1 19 116 6 104 7.61e-23 95.9
MS.gene031105.t1 MTR_5g079120 41.121 107 62 1 17 122 58 164 8.35e-23 97.1
MS.gene031105.t1 MTR_0247s0040 41.837 98 56 1 19 115 6 103 3.59e-22 92.4
MS.gene031105.t1 MTR_6g027360 39.024 123 72 3 6 126 61 182 4.07e-22 95.5
MS.gene031105.t1 MTR_7g017260 44.000 100 53 2 19 115 24 123 4.65e-22 94.4
MS.gene031105.t1 MTR_0001s0360 40.566 106 62 1 18 122 5 110 5.31e-22 94.0
MS.gene031105.t1 MTR_6g027340 38.462 117 70 2 11 126 5 120 7.12e-22 92.4
MS.gene031105.t1 MTR_5g082910 50.467 107 48 4 11 115 9 112 7.90e-22 94.0
MS.gene031105.t1 MTR_3g077650 28.700 223 129 9 22 233 181 384 9.40e-22 95.9
MS.gene031105.t1 MTR_1g026870 43.269 104 57 2 20 122 83 185 1.15e-21 96.7
MS.gene031105.t1 MTR_7g037260 40.984 122 68 3 5 123 126 246 1.17e-21 94.7
MS.gene031105.t1 MTR_7g450950 39.815 108 63 2 22 128 157 263 1.88e-21 94.0
MS.gene031105.t1 MTR_4g094982 44.144 111 60 2 22 131 5 114 1.91e-21 92.8
MS.gene031105.t1 MTR_3g101290 44.118 102 55 2 22 122 37 137 2.44e-21 91.3
MS.gene031105.t1 MTR_3g110028 42.308 104 58 2 20 122 83 185 3.06e-21 95.5
MS.gene031105.t1 MTR_0193s0090 39.423 104 62 1 19 121 6 109 3.58e-21 90.5
MS.gene031105.t1 MTR_5g016510 46.078 102 53 2 22 122 5 105 4.00e-21 92.8
MS.gene031105.t1 MTR_5g041570 29.688 192 125 6 11 200 125 308 4.96e-21 94.0
MS.gene031105.t1 MTR_5g078930 42.708 96 54 1 21 115 10 105 5.38e-21 90.5
MS.gene031105.t1 MTR_5g010650 50.515 97 46 2 20 115 108 203 5.46e-21 94.0
MS.gene031105.t1 MTR_7g061330 44.231 104 56 2 20 122 111 213 6.84e-21 94.0
MS.gene031105.t1 MTR_7g461410 44.231 104 56 2 20 122 111 213 6.84e-21 94.0
MS.gene031105.t1 MTR_0197s0010 40.367 109 64 1 24 131 5 113 8.59e-21 90.1
MS.gene031105.t1 MTR_7g061330 44.231 104 56 2 20 122 75 177 8.66e-21 93.6
MS.gene031105.t1 MTR_4g123040 40.870 115 67 1 14 127 18 132 9.40e-21 91.7
MS.gene031105.t1 MTR_5g007300 48.780 82 39 1 11 92 58 136 1.89e-20 86.7
MS.gene031105.t1 MTR_5g049190 42.056 107 58 3 22 125 19 124 2.25e-20 89.0
MS.gene031105.t1 MTR_7g451170 38.843 121 70 3 5 122 172 291 7.03e-20 90.5
MS.gene031105.t1 MTR_7g037130 40.678 118 66 3 6 120 127 243 1.25e-19 89.0
MS.gene031105.t1 MTR_5g070020 40.741 108 62 2 16 122 116 222 1.29e-19 89.0
MS.gene031105.t1 MTR_3g089045 41.071 112 64 2 18 128 12 122 1.88e-19 87.4
MS.gene031105.t1 MTR_6g015455 47.368 95 48 2 22 115 5 98 2.06e-19 90.1
MS.gene031105.t1 MTR_4g082040 43.750 96 52 2 22 116 105 199 2.22e-19 89.0
MS.gene031105.t1 MTR_3g463400 40.385 104 60 2 20 122 131 233 3.83e-19 88.6
MS.gene031105.t1 MTR_7g111290 56.923 65 27 1 52 115 2 66 5.04e-19 87.0
MS.gene031105.t1 MTR_4g063100 49.367 79 39 1 52 129 10 88 1.39e-18 84.0
MS.gene031105.t1 MTR_1g057980 41.905 105 59 2 17 120 75 178 1.74e-18 85.1
MS.gene031105.t1 MTR_4g105660 40.952 105 58 3 20 122 178 280 2.05e-18 86.3
MS.gene031105.t1 MTR_7g086960 43.269 104 57 2 22 124 89 191 2.34e-18 85.5
MS.gene031105.t1 MTR_6g055910 45.238 84 42 2 53 132 18 101 6.36e-18 82.4
MS.gene031105.t1 MTR_3g045430 41.346 104 60 1 20 122 13 116 8.53e-18 82.8
MS.gene031105.t1 MTR_6g027370 39.623 106 62 2 22 126 99 203 9.49e-18 83.6
MS.gene031105.t1 MTR_4g088015 39.604 101 59 2 22 121 221 320 1.25e-17 84.0
MS.gene031105.t1 MTR_7g061550 26.333 300 179 9 25 283 10 308 3.31e-17 82.0
MS.gene031105.t1 MTR_7g035350 42.268 97 54 2 25 120 228 323 4.39e-17 82.4
MS.gene031105.t1 MTR_2g096380 48.000 75 38 1 52 125 19 93 1.23e-16 78.2
MS.gene031105.t1 MTR_0023s0210 43.243 74 42 0 19 92 6 79 5.68e-15 69.7
MS.gene031105.t1 MTR_8g468380 33.333 126 82 2 1 125 1 125 1.18e-14 75.1
MS.gene031105.t1 MTR_5g038910 32.168 143 90 5 1 138 6 146 5.64e-13 70.1
MS.gene031105.t1 MTR_5g038910 32.168 143 90 5 1 138 6 146 1.08e-12 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene031105.t1 AT4G28110 55.140 107 47 1 17 122 9 115 8.72e-35 129
MS.gene031105.t1 AT2G32460 52.778 108 50 1 18 124 16 123 3.92e-34 131
MS.gene031105.t1 AT2G32460 52.778 108 50 1 18 124 4 111 4.37e-34 131
MS.gene031105.t1 AT5G55020 53.774 106 48 1 20 124 26 131 1.02e-33 130
MS.gene031105.t1 AT5G06100 34.199 231 114 9 19 225 31 247 2.94e-33 128
MS.gene031105.t1 AT3G61250 46.825 126 61 2 19 143 11 131 3.21e-33 125
MS.gene031105.t1 AT2G26960 46.400 125 66 1 1 124 1 125 5.21e-33 127
MS.gene031105.t1 AT5G06100 34.199 231 114 9 19 225 31 247 5.80e-33 128
MS.gene031105.t1 AT5G06100 34.199 231 114 9 19 225 31 247 5.80e-33 128
MS.gene031105.t1 AT5G06100 34.199 231 114 9 19 225 31 247 5.80e-33 128
MS.gene031105.t1 AT5G06100 34.199 231 114 9 19 225 31 247 5.80e-33 128
MS.gene031105.t1 AT4G26930 34.351 262 134 7 9 233 2 262 1.86e-32 125
MS.gene031105.t1 AT4G05100 53.271 107 49 1 17 122 10 116 2.22e-32 123
MS.gene031105.t1 AT3G11440 51.887 106 50 1 20 124 41 146 2.84e-32 126
MS.gene031105.t1 AT4G21440 52.336 107 50 1 17 122 9 115 3.15e-32 124
MS.gene031105.t1 AT3G23250 37.158 183 103 3 19 200 11 182 3.30e-32 122
MS.gene031105.t1 AT3G11440 51.887 106 50 1 20 124 41 146 7.06e-32 125
MS.gene031105.t1 AT3G11440 51.887 106 50 1 20 124 41 146 7.06e-32 125
MS.gene031105.t1 AT3G11440 51.887 106 50 1 20 124 41 146 7.06e-32 125
MS.gene031105.t1 AT5G54230 51.923 104 49 1 20 122 12 115 9.74e-32 122
MS.gene031105.t1 AT4G17785 54.206 107 48 1 17 122 10 116 1.38e-31 122
MS.gene031105.t1 AT4G17785 54.206 107 48 1 17 122 10 116 1.73e-31 122
MS.gene031105.t1 AT5G16770 51.402 107 51 1 17 122 9 115 2.32e-31 120
MS.gene031105.t1 AT5G16770 51.402 107 51 1 17 122 9 115 2.32e-31 120
MS.gene031105.t1 AT5G16770 51.402 107 51 1 17 122 9 115 3.37e-31 120
MS.gene031105.t1 AT5G16770 51.402 107 51 1 17 122 9 115 3.37e-31 120
MS.gene031105.t1 AT1G06180 45.455 132 65 2 19 149 11 136 4.49e-31 118
MS.gene031105.t1 AT4G01680 53.774 106 48 1 20 124 12 117 1.20e-30 117
MS.gene031105.t1 AT1G16490 53.846 104 47 1 20 122 14 117 1.49e-30 117
MS.gene031105.t1 AT5G10280 50.459 109 53 1 15 122 7 115 1.59e-30 119
MS.gene031105.t1 AT4G01680 52.137 117 54 2 20 135 12 127 2.35e-30 118
MS.gene031105.t1 AT5G65230 52.294 109 51 1 15 122 7 115 2.53e-30 117
MS.gene031105.t1 AT3G13540 49.074 108 54 1 16 122 19 126 3.46e-30 115
MS.gene031105.t1 AT3G02940 50.467 107 52 1 17 122 9 115 5.25e-30 117
MS.gene031105.t1 AT2G31180 46.667 120 62 2 19 136 11 130 7.01e-30 115
MS.gene031105.t1 AT3G02940 50.467 107 52 1 17 122 9 115 8.37e-30 116
MS.gene031105.t1 AT3G02940 50.467 107 52 1 17 122 9 115 8.37e-30 116
MS.gene031105.t1 AT5G14750 45.455 110 59 1 7 115 3 112 1.04e-29 113
MS.gene031105.t1 AT3G08500 47.748 111 57 1 13 122 23 133 1.10e-29 117
MS.gene031105.t1 AT5G12870 48.182 110 56 1 18 126 16 125 1.17e-29 115
MS.gene031105.t1 AT1G57560 55.000 100 44 1 17 115 9 108 1.30e-29 115
MS.gene031105.t1 AT1G57560 56.701 97 41 1 20 115 12 108 1.53e-29 115
MS.gene031105.t1 AT5G26660 49.541 109 54 1 17 124 9 117 4.21e-29 115
MS.gene031105.t1 AT5G57620 48.739 119 55 3 20 132 12 130 8.43e-29 114
MS.gene031105.t1 AT1G56160 52.885 104 48 1 20 122 14 117 8.93e-29 113
MS.gene031105.t1 AT1G79180 52.885 104 48 1 20 122 14 117 9.71e-29 113
MS.gene031105.t1 AT4G37780 50.000 106 51 2 19 122 11 116 1.02e-28 113
MS.gene031105.t1 AT3G30210 44.715 123 67 1 19 140 26 148 1.05e-28 112
MS.gene031105.t1 AT5G23000 54.286 105 46 2 20 122 12 116 1.19e-28 113
MS.gene031105.t1 AT1G18570 48.148 108 55 1 16 122 9 116 1.57e-28 114
MS.gene031105.t1 AT3G53200 48.148 108 55 1 17 123 6 113 1.73e-28 111
MS.gene031105.t1 AT3G27810 40.223 179 93 6 17 194 17 182 1.74e-28 110
MS.gene031105.t1 AT1G74650 42.373 118 67 1 20 136 12 129 1.77e-28 113
MS.gene031105.t1 AT3G12720 49.038 104 52 1 20 122 22 125 2.02e-28 112
MS.gene031105.t1 AT1G34670 49.533 107 53 1 17 122 9 115 2.07e-28 114
MS.gene031105.t1 AT3G13890 47.664 107 55 1 17 122 9 115 2.18e-28 113
MS.gene031105.t1 AT1G66230 38.462 156 89 2 19 167 11 166 2.51e-28 111
MS.gene031105.t1 AT3G28910 44.444 117 62 2 19 132 11 127 3.19e-28 112
MS.gene031105.t1 AT5G56110 49.038 104 52 1 20 122 12 115 3.31e-28 112
MS.gene031105.t1 AT3G49690 49.550 111 54 2 20 128 12 122 3.31e-28 112
MS.gene031105.t1 AT3G47600 44.954 109 59 1 19 126 11 119 3.80e-28 112
MS.gene031105.t1 AT5G62470 42.188 128 68 2 19 140 11 138 3.87e-28 112
MS.gene031105.t1 AT1G22640 51.546 97 46 1 20 115 12 108 3.88e-28 110
MS.gene031105.t1 AT4G12350 34.911 169 103 3 20 186 12 175 5.80e-28 110
MS.gene031105.t1 AT1G09540 50.467 107 52 1 17 122 9 115 6.70e-28 112
MS.gene031105.t1 AT5G15310 47.619 105 54 1 19 122 11 115 8.10e-28 109
MS.gene031105.t1 AT5G49330 51.020 98 47 1 19 115 11 108 9.06e-28 111
MS.gene031105.t1 AT1G08810 48.571 105 53 1 19 122 11 115 1.22e-27 110
MS.gene031105.t1 AT4G38620 50.980 102 49 1 22 122 14 115 1.23e-27 110
MS.gene031105.t1 AT5G15310 47.619 105 54 1 19 122 11 115 1.27e-27 110
MS.gene031105.t1 AT4G22680 49.524 105 52 1 19 122 11 115 1.30e-27 109
MS.gene031105.t1 AT3G01140 47.619 105 54 1 19 122 11 115 1.37e-27 111
MS.gene031105.t1 AT1G63910 45.614 114 61 1 17 129 9 122 1.45e-27 111
MS.gene031105.t1 AT5G65790 48.673 113 56 2 20 130 12 124 1.54e-27 111
MS.gene031105.t1 AT5G15310 47.619 105 54 1 19 122 11 115 1.59e-27 110
MS.gene031105.t1 AT3G01140 47.619 105 54 1 19 122 54 158 1.92e-27 111
MS.gene031105.t1 AT1G48000 38.000 150 87 3 20 165 32 179 2.06e-27 108
MS.gene031105.t1 AT5G16600 47.706 109 56 1 19 126 11 119 2.08e-27 110
MS.gene031105.t1 AT3G62610 51.020 98 47 1 19 115 11 108 2.09e-27 110
MS.gene031105.t1 AT5G14340 47.706 109 56 1 19 126 23 131 2.23e-27 108
MS.gene031105.t1 AT5G40330 45.631 103 55 1 14 115 6 108 2.26e-27 107
MS.gene031105.t1 AT5G60890 47.664 107 55 1 17 122 9 115 2.26e-27 109
MS.gene031105.t1 AT2G47460 47.706 109 56 1 19 126 11 119 2.34e-27 110
MS.gene031105.t1 AT1G74080 49.495 99 49 1 18 115 10 108 2.55e-27 110
MS.gene031105.t1 AT1G74430 46.667 105 55 1 19 122 11 115 2.57e-27 108
MS.gene031105.t1 AT1G68320 45.370 108 58 1 20 126 19 126 2.92e-27 108
MS.gene031105.t1 AT3G01530 48.544 103 52 1 17 118 22 124 3.58e-27 106
MS.gene031105.t1 AT5G61420 49.057 106 53 1 18 122 10 115 3.59e-27 110
MS.gene031105.t1 AT4G01680 47.287 129 54 3 20 135 12 139 3.90e-27 110
MS.gene031105.t1 AT5G40350 49.515 103 51 1 20 121 17 119 4.58e-27 106
MS.gene031105.t1 AT3G12820 50.962 104 50 1 20 122 14 117 4.85e-27 107
MS.gene031105.t1 AT3G28470 49.485 97 48 1 20 115 12 108 8.36e-27 108
MS.gene031105.t1 AT5G62470 42.188 128 67 3 19 140 11 137 1.03e-26 108
MS.gene031105.t1 AT5G07690 50.505 99 48 1 18 115 10 108 1.15e-26 108
MS.gene031105.t1 AT3G27920 47.917 96 49 1 21 115 15 110 1.33e-26 105
MS.gene031105.t1 AT5G07700 48.113 106 54 1 18 122 10 115 1.34e-26 108
MS.gene031105.t1 AT5G07700 48.113 106 54 1 18 122 10 115 1.34e-26 108
MS.gene031105.t1 AT1G35515 49.485 97 48 1 20 115 12 108 1.39e-26 105
MS.gene031105.t1 AT1G25340 40.945 127 72 2 1 126 1 125 1.68e-26 107
MS.gene031105.t1 AT4G09460 50.526 95 46 1 22 115 14 108 2.21e-26 105
MS.gene031105.t1 AT5G62320 48.598 107 47 2 17 115 10 116 2.46e-26 105
MS.gene031105.t1 AT2G47190 41.667 108 62 1 20 126 20 127 2.51e-26 106
MS.gene031105.t1 AT3G60460 45.872 109 57 2 20 126 11 119 2.92e-26 106
MS.gene031105.t1 AT3G24310 46.364 110 58 1 16 124 14 123 3.32e-26 105
MS.gene031105.t1 AT4G34990 50.526 95 46 1 22 115 14 108 4.63e-26 105
MS.gene031105.t1 AT2G16720 48.454 97 49 1 20 115 12 108 5.14e-26 105
MS.gene031105.t1 AT3G13890 43.966 116 55 2 17 122 9 124 1.37e-25 105
MS.gene031105.t1 AT2G36890 48.571 105 52 2 20 122 12 116 1.51e-25 104
MS.gene031105.t1 AT4G13480 47.273 110 57 1 16 124 2 111 1.73e-25 103
MS.gene031105.t1 AT2G36890 48.571 105 52 2 20 122 53 157 2.69e-25 104
MS.gene031105.t1 AT5G35550 46.154 104 55 1 20 122 14 117 2.83e-25 102
MS.gene031105.t1 AT3G46130 43.925 107 59 1 17 122 6 112 5.01e-25 102
MS.gene031105.t1 AT3G06490 44.355 124 68 1 5 127 4 127 8.91e-25 103
MS.gene031105.t1 AT1G18710 43.810 105 58 1 19 122 11 115 1.17e-24 101
MS.gene031105.t1 AT5G59780 44.660 103 56 1 21 122 9 111 1.47e-24 100
MS.gene031105.t1 AT2G26950 42.609 115 65 1 10 123 6 120 4.45e-24 102
MS.gene031105.t1 AT3G55730 47.170 106 54 2 22 126 56 160 7.33e-24 101
MS.gene031105.t1 AT2G39880 50.980 102 48 2 22 122 50 150 8.44e-24 100
MS.gene031105.t1 AT3G48920 39.583 144 81 2 21 158 19 162 1.46e-23 98.6
MS.gene031105.t1 AT1G79180 40.876 137 47 2 20 122 14 150 2.06e-23 99.4
MS.gene031105.t1 AT1G17950 42.727 110 55 3 22 124 5 113 4.70e-23 96.7
MS.gene031105.t1 AT3G50060 51.579 95 44 2 22 115 6 99 9.77e-23 97.1
MS.gene031105.t1 AT5G52600 43.299 97 54 1 20 115 12 108 3.63e-22 93.2
MS.gene031105.t1 AT5G40360 37.063 143 78 3 20 161 156 287 3.64e-22 96.3
MS.gene031105.t1 AT5G52260 43.478 115 64 1 9 122 1 115 4.26e-22 94.4
MS.gene031105.t1 AT4G33450 40.870 115 66 2 11 124 8 121 5.04e-22 94.0
MS.gene031105.t1 AT1G25340 38.583 127 70 3 1 126 1 120 5.13e-22 94.4
MS.gene031105.t1 AT1G66380 42.718 103 58 1 14 115 2 104 5.23e-22 90.9
MS.gene031105.t1 AT3G09230 41.964 112 63 2 22 132 55 165 8.04e-22 95.9
MS.gene031105.t1 AT1G25340 38.583 127 70 3 1 126 1 120 9.08e-22 94.4
MS.gene031105.t1 AT5G67300 49.474 95 46 2 22 115 6 99 1.81e-21 93.6
MS.gene031105.t1 AT5G17800 42.593 108 60 2 22 128 93 199 2.14e-21 93.6
MS.gene031105.t1 AT4G18770 40.909 110 63 2 14 122 209 317 3.02e-21 94.4
MS.gene031105.t1 AT5G49620 43.750 112 62 1 17 127 23 134 3.09e-21 92.8
MS.gene031105.t1 AT4G25560 45.631 103 55 1 21 122 11 113 5.27e-21 91.7
MS.gene031105.t1 AT1G66370 43.434 99 55 1 18 115 6 104 5.33e-21 90.9
MS.gene031105.t1 AT5G02320 43.269 104 57 2 20 122 65 167 8.06e-21 93.6
MS.gene031105.t1 AT5G02320 43.269 104 57 2 20 122 125 227 8.08e-21 94.0
MS.gene031105.t1 AT5G02320 43.269 104 57 2 20 122 125 227 8.08e-21 94.0
MS.gene031105.t1 AT3G29020 41.346 104 59 2 14 116 57 159 1.00e-20 90.1
MS.gene031105.t1 AT1G69560 33.333 150 95 4 13 160 114 260 1.07e-20 92.0
MS.gene031105.t1 AT1G69560 33.333 150 95 4 13 160 98 244 1.08e-20 91.7
MS.gene031105.t1 AT1G56650 42.718 103 58 1 14 115 2 104 1.39e-20 89.7
MS.gene031105.t1 AT5G58850 35.811 148 92 3 16 161 99 245 1.66e-20 92.4
MS.gene031105.t1 AT2G23290 48.421 95 47 2 22 115 13 106 2.13e-20 90.5
MS.gene031105.t1 AT3G29020 41.748 103 58 2 15 116 60 161 2.36e-20 90.5
MS.gene031105.t1 AT1G73410 44.037 109 57 3 22 128 6 112 2.41e-20 89.0
MS.gene031105.t1 AT1G73410 42.593 108 60 2 22 128 6 112 2.44e-20 88.2
MS.gene031105.t1 AT5G11510 39.423 104 61 2 20 122 79 181 2.47e-20 92.8
MS.gene031105.t1 AT5G11510 39.423 104 61 2 20 122 79 181 2.47e-20 92.8
MS.gene031105.t1 AT5G11510 39.423 104 61 2 20 122 79 181 2.47e-20 92.8
MS.gene031105.t1 AT5G11510 39.423 104 61 2 20 122 79 181 2.57e-20 92.8
MS.gene031105.t1 AT5G11510 39.423 104 61 2 20 122 79 181 2.61e-20 92.8
MS.gene031105.t1 AT1G66390 41.748 103 59 1 14 115 2 104 2.63e-20 89.4
MS.gene031105.t1 AT4G37260 48.421 95 47 2 22 115 13 106 2.65e-20 90.5
MS.gene031105.t1 AT3G53200 55.556 72 31 1 53 123 9 80 3.12e-20 87.8
MS.gene031105.t1 AT3G09370 43.269 104 57 2 20 122 141 243 3.43e-20 92.0
MS.gene031105.t1 AT3G09370 43.269 104 57 2 20 122 133 235 3.62e-20 91.7
MS.gene031105.t1 AT3G09370 43.269 104 57 2 20 122 128 230 3.84e-20 91.7
MS.gene031105.t1 AT4G32730 42.308 104 58 2 20 122 85 187 4.82e-20 92.0
MS.gene031105.t1 AT4G32730 42.308 104 58 2 20 122 85 187 4.82e-20 92.0
MS.gene031105.t1 AT4G32730 42.308 104 58 2 20 122 85 187 4.82e-20 92.0
MS.gene031105.t1 AT4G32730 42.308 104 58 2 20 122 85 187 4.82e-20 92.0
MS.gene031105.t1 AT4G32730 42.308 104 58 2 20 122 85 187 5.87e-20 91.7
MS.gene031105.t1 AT5G11050 37.903 124 67 3 18 132 101 223 2.85e-19 88.6
MS.gene031105.t1 AT5G26660 50.685 73 35 1 53 124 14 86 5.28e-19 86.7
MS.gene031105.t1 AT1G26780 41.837 98 55 2 20 116 96 192 6.10e-19 85.9
MS.gene031105.t1 AT5G40430 32.083 240 117 11 15 234 42 255 6.38e-19 85.5
MS.gene031105.t1 AT3G27785 38.938 113 66 3 22 132 189 300 8.67e-19 87.4
MS.gene031105.t1 AT1G26780 39.623 106 62 2 20 124 96 200 9.20e-19 86.7
MS.gene031105.t1 AT4G00540 46.296 108 51 4 20 122 101 206 1.90e-18 86.3
MS.gene031105.t1 AT4G00540 46.296 108 51 4 20 122 99 204 2.60e-18 85.9
MS.gene031105.t1 AT2G25230 29.796 245 124 8 15 235 14 234 3.09e-18 83.2
MS.gene031105.t1 AT5G49620 38.095 126 63 1 17 127 23 148 3.37e-18 84.7
MS.gene031105.t1 AT5G35550 52.113 71 33 1 53 122 50 120 4.02e-17 80.5
MS.gene031105.t1 AT5G14750 52.459 61 28 1 56 115 18 78 5.01e-17 78.2
MS.gene031105.t1 AT3G27810 38.462 143 74 6 53 194 4 133 2.14e-16 76.6
MS.gene031105.t1 AT5G40350 50.000 72 35 1 51 121 3 74 4.54e-16 75.5
MS.gene031105.t1 AT3G46130 50.000 72 35 1 52 122 9 80 5.52e-16 76.6
MS.gene031105.t1 AT5G59780 50.704 71 34 1 53 122 20 90 5.71e-16 76.3
MS.gene031105.t1 AT3G46130 50.704 71 34 1 53 122 20 90 1.14e-15 75.9
MS.gene031105.t1 AT5G39700 33.333 138 85 3 14 145 48 184 1.82e-15 74.3
MS.gene031105.t1 AT3G12820 51.471 68 32 1 56 122 2 69 5.28e-15 73.2
MS.gene031105.t1 AT1G66380 44.286 70 39 0 14 83 2 71 6.21e-15 70.5
MS.gene031105.t1 AT3G47600 42.667 75 42 1 53 126 39 113 8.77e-15 74.7
MS.gene031105.t1 AT2G37630 40.777 103 58 2 25 124 7 109 1.04e-14 74.7
MS.gene031105.t1 AT1G66380 44.286 70 38 1 47 115 2 71 9.47e-14 67.0
MS.gene031105.t1 AT1G14350 35.398 113 71 2 14 125 17 128 1.12e-12 68.9
MS.gene031105.t1 AT1G14350 35.398 113 71 2 14 125 17 128 1.12e-12 68.9
MS.gene031105.t1 AT2G02820 32.061 131 82 3 9 138 17 141 1.67e-12 68.6
MS.gene031105.t1 AT2G02820 32.061 131 82 3 9 138 17 141 1.81e-12 68.6
MS.gene031105.t1 AT1G18960 36.634 101 62 2 22 122 10 108 3.40e-12 67.0
MS.gene031105.t1 AT2G02820 33.051 118 77 2 9 125 17 133 3.56e-12 67.0

Find 71 sgRNAs with CRISPR-Local

Find 129 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGGAAAATGATGGTTTAT+TGG 0.212474 6.2:+8330412 MS.gene031105:CDS
GCATCCCTCTGAGATAAATT+TGG 0.256498 6.2:+8330487 MS.gene031105:CDS
ACACTTTAGTGTATCTAATA+TGG 0.290933 6.2:-8330276 None:intergenic
AGCATACCATGGCGACTTAA+TGG 0.303746 6.2:+8330394 MS.gene031105:CDS
ATGGCATGATCTGTTCTTCC+TGG 0.305835 6.2:-8329740 None:intergenic
CACGATAATGTCTTCATCTA+AGG 0.307566 6.2:+8328513 None:intergenic
TTCTCTTTGTCACAGCTTCC+AGG 0.340001 6.2:+8329722 MS.gene031105:intron
ATAAATTTGGTTGGTGAAAG+AGG 0.344708 6.2:+8330500 MS.gene031105:CDS
ATAAATTTCAGGGGTGGTAT+TGG 0.346399 6.2:+8330098 MS.gene031105:intron
GATGAATCACCTAGACAAAA+AGG 0.349004 6.2:+8328714 MS.gene031105:CDS
TCCATACCAATGGTTCTTGA+TGG 0.352879 6.2:-8329759 None:intergenic
CTCACACATCAATGGATGTT+GGG 0.381248 6.2:-8329922 None:intergenic
TCCAATGAACAATTACAGTA+TGG 0.385880 6.2:-8330251 None:intergenic
CTTGCTTCTTCTTCACTGAA+TGG 0.393540 6.2:-8328748 None:intergenic
TCCATACTGTAATTGTTCAT+TGG 0.394641 6.2:+8330250 MS.gene031105:CDS
CAACATATTTGAATCACATA+AGG 0.455216 6.2:-8329858 None:intergenic
AATGGTGATTCTACTGAGAA+AGG 0.463601 6.2:+8328553 MS.gene031105:CDS
GTGGAGTGAAATTGCTGTCC+AGG 0.469887 6.2:+8328804 MS.gene031105:CDS
ATAACTTTGGTTGATGAAAG+AGG 0.469925 6.2:+8330338 MS.gene031105:CDS
AGCAAACCTTGGTGACTCAA+TGG 0.472604 6.2:+8330556 MS.gene031105:CDS
GCTTGAAACACTAGAGAGTT+GGG 0.477661 6.2:+8330442 MS.gene031105:CDS
GTCTCTGAGTTACGTACTGT+TGG 0.486991 6.2:+8328775 MS.gene031105:CDS
GACAGCAATTTCACTCCACT+TGG 0.491446 6.2:-8328800 None:intergenic
TGCTTGAAACACTAGAGAGT+TGG 0.492375 6.2:+8330441 MS.gene031105:CDS
TGGAACTTCTCCTACACCTA+TGG 0.507101 6.2:+8330118 MS.gene031105:CDS
TAACTTTGGTTGATGAAAGA+GGG 0.510419 6.2:+8330339 MS.gene031105:CDS
TGCTCGGATGCTACTCGCAT+GGG 0.511126 6.2:+8330305 MS.gene031105:CDS
ACTCACACATCAATGGATGT+TGG 0.515271 6.2:-8329923 None:intergenic
TAAATTTGGTTGGTGAAAGA+GGG 0.518186 6.2:+8330501 MS.gene031105:CDS
ATGGTGATTCTACTGAGAAA+GGG 0.518357 6.2:+8328554 MS.gene031105:CDS
ATGCTCGGATGCTACTCGCA+TGG 0.519476 6.2:+8330304 MS.gene031105:CDS
ATAAGGTTGGAAGTTGTTCA+CGG 0.528375 6.2:-8329841 None:intergenic
TTCTCCTACACCTATGGCTA+TGG 0.529336 6.2:+8330124 MS.gene031105:CDS
ATTTATCTCAGAGGGATGCA+TGG 0.531649 6.2:-8330483 None:intergenic
GGGTCCCTCTGAGATAACTT+TGG 0.535099 6.2:+8330325 MS.gene031105:CDS
GCCATCAAGAACCATTGGTA+TGG 0.536170 6.2:+8329758 MS.gene031105:CDS
GGCGACTTAATGGAAAATGA+TGG 0.537550 6.2:+8330404 MS.gene031105:CDS
ACCAACCAAATTTATCTCAG+AGG 0.540604 6.2:-8330492 None:intergenic
ACTAAAGTGTTGGCAATGCT+CGG 0.543484 6.2:+8330289 MS.gene031105:CDS
ATAATCTACTCACACATCAA+TGG 0.544211 6.2:-8329930 None:intergenic
ATATTTGAATCACATAAGGT+TGG 0.545957 6.2:-8329854 None:intergenic
ATTTGTTGATAGTCCATGGT+TGG 0.547258 6.2:-8330185 None:intergenic
GTAGAAGTTGTCGTTTGAGA+TGG 0.550496 6.2:+8328692 MS.gene031105:CDS
TGGAATTTGTTGATAGTCCA+TGG 0.553502 6.2:-8330189 None:intergenic
CCCTCTGAGATAAATTTGGT+TGG 0.555213 6.2:+8330491 MS.gene031105:CDS
CCAACCAAATTTATCTCAGA+GGG 0.557019 6.2:-8330491 None:intergenic
ATCATGCCATCAAGAACCAT+TGG 0.560892 6.2:+8329753 MS.gene031105:CDS
TTTATCTCAGAGGGATGCAT+GGG 0.583089 6.2:-8330482 None:intergenic
TGATATGATACCATAGCCAT+AGG 0.584030 6.2:-8330134 None:intergenic
AAATATGTTGTACAATGATG+TGG 0.584256 6.2:+8329871 MS.gene031105:CDS
AGGTCCATGGTCAAAAGAAG+AGG 0.588105 6.2:+8328585 MS.gene031105:CDS
ATCTGATAAGTCTCATCAGA+TGG 0.589349 6.2:-8330212 None:intergenic
GAGAAAGAAATATGCAACAA+TGG 0.590761 6.2:+8328535 MS.gene031105:CDS
AATGCAGGTCTTAGCAGATG+TGG 0.599960 6.2:+8328670 MS.gene031105:CDS
ATCAACCAAAGTTATCTCAG+AGG 0.600239 6.2:-8330330 None:intergenic
ACTCTCTAGTGTTTCAAGCA+TGG 0.600651 6.2:-8330438 None:intergenic
ATCTGATGAGACTTATCAGA+TGG 0.601606 6.2:+8330214 MS.gene031105:CDS
TCACACATCAATGGATGTTG+GGG 0.609122 6.2:-8329921 None:intergenic
GATACCATAGCCATAGGTGT+AGG 0.611189 6.2:-8330128 None:intergenic
TATTAGATACACTAAAGTGT+TGG 0.611464 6.2:+8330279 MS.gene031105:CDS
CAATATCCATTGAGTCACCA+AGG 0.615677 6.2:-8330562 None:intergenic
TCAACCAAAGTTATCTCAGA+GGG 0.615803 6.2:-8330329 None:intergenic
AATGATGTTAGAGCAAACCT+TGG 0.622588 6.2:+8330545 MS.gene031105:CDS
GAAACACTAGAGAGTTGGGA+AGG 0.633047 6.2:+8330446 MS.gene031105:CDS
TATGAACACTCTTGCAGTGG+AGG 0.644093 6.2:-8330158 None:intergenic
AATATGTTGTACAATGATGT+GGG 0.649540 6.2:+8329872 MS.gene031105:CDS
GTGTTCATACATTCCAACCA+TGG 0.651531 6.2:+8330172 MS.gene031105:CDS
TGATAAGTCTCATCAGATGG+TGG 0.651541 6.2:-8330209 None:intergenic
TACGTACTGTTGGATCCAAG+TGG 0.661464 6.2:+8328785 MS.gene031105:CDS
ATGTATGAACACTCTTGCAG+TGG 0.669962 6.2:-8330161 None:intergenic
AATTATGTTGAAGCATACCA+TGG 0.670072 6.2:+8330383 MS.gene031105:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTTAACATTATTAGTAA+CGG - chr6.2:8330066-8330085 None:intergenic 10.0%
!! TACGTTAAAAAATAATAATT+TGG + chr6.2:8329168-8329187 MS.gene031105:intron 10.0%
!!! AATAAATAAAATCCAATTTT+TGG + chr6.2:8329312-8329331 MS.gene031105:intron 10.0%
!! AATTTAACATTATTAGTAAC+GGG - chr6.2:8330065-8330084 None:intergenic 15.0%
!!! GTACAAAAAATAAATGTTTT+TGG - chr6.2:8329451-8329470 None:intergenic 15.0%
!!! TGTTTTTATATATACATATG+AGG + chr6.2:8329996-8330015 MS.gene031105:intron 15.0%
!! AAATCTATTTGCAAACAAAA+AGG - chr6.2:8329657-8329676 None:intergenic 20.0%
!! ATGTTACATTCATAAATTTC+AGG + chr6.2:8330087-8330106 MS.gene031105:intron 20.0%
!! ATTTAACATTATTAGTAACG+GGG - chr6.2:8330064-8330083 None:intergenic 20.0%
!! TGTTACATTCATAAATTTCA+GGG + chr6.2:8330088-8330107 MS.gene031105:intron 20.0%
!! TTTATGTAAAGATAAATACC+TGG - chr6.2:8328825-8328844 None:intergenic 20.0%
!!! ACATAATTTTCTAGAGAAAT+AGG - chr6.2:8330371-8330390 None:intergenic 20.0%
!!! CAATTTTTTTCAAAAATGAG+TGG - chr6.2:8329074-8329093 None:intergenic 20.0%
!!! CACTCATTTTTGAAAAAAAT+TGG + chr6.2:8329072-8329091 MS.gene031105:intron 20.0%
!!! TTGAATTTTAGAAAAGACAA+TGG - chr6.2:8329962-8329981 None:intergenic 20.0%
! AAATATGTTGTACAATGATG+TGG + chr6.2:8329871-8329890 MS.gene031105:CDS 25.0%
! AAGTGGTAAATACAATAATG+TGG - chr6.2:8329500-8329519 None:intergenic 25.0%
! AATATGTTGTACAATGATGT+GGG + chr6.2:8329872-8329891 MS.gene031105:CDS 25.0%
! AATGGAAAATGATGGTTTAT+TGG + chr6.2:8330412-8330431 MS.gene031105:CDS 25.0%
! AATTCAGTATCAAAAAATGC+AGG + chr6.2:8328655-8328674 MS.gene031105:CDS 25.0%
! ACACTTTAGTGTATCTAATA+TGG - chr6.2:8330279-8330298 None:intergenic 25.0%
! ATATTTGAATCACATAAGGT+TGG - chr6.2:8329857-8329876 None:intergenic 25.0%
! CAAAAAATGAACCGAAAAAT+TGG + chr6.2:8328632-8328651 MS.gene031105:CDS 25.0%
! CAACATATTTGAATCACATA+AGG - chr6.2:8329861-8329880 None:intergenic 25.0%
! GATCTCAAGTAATCAAAAAA+TGG + chr6.2:8328972-8328991 MS.gene031105:intron 25.0%
! GTTACATTCATAAATTTCAG+GGG + chr6.2:8330089-8330108 MS.gene031105:intron 25.0%
! TATTAGATACACTAAAGTGT+TGG + chr6.2:8330279-8330298 MS.gene031105:CDS 25.0%
!! GATACTGAATTCCAATTTTT+CGG - chr6.2:8328646-8328665 None:intergenic 25.0%
!! TTCCAAAATCAACGATATTT+TGG + chr6.2:8329343-8329362 MS.gene031105:intron 25.0%
!! TTGTGTTGTTGTATTAGAAT+TGG + chr6.2:8329677-8329696 MS.gene031105:intron 25.0%
!!! ACATCATTTTCTAGAGAAAT+TGG - chr6.2:8330533-8330552 None:intergenic 25.0%
AACAAACAAAGTTACACAAG+TGG - chr6.2:8329517-8329536 None:intergenic 30.0%
AAGATGCAATATAAGAAAGC+CGG - chr6.2:8329115-8329134 None:intergenic 30.0%
AATTATGTTGAAGCATACCA+TGG + chr6.2:8330383-8330402 MS.gene031105:CDS 30.0%
AGGCACACTAACATTAAAAA+TGG - chr6.2:8329620-8329639 None:intergenic 30.0%
ATAATCTACTCACACATCAA+TGG - chr6.2:8329933-8329952 None:intergenic 30.0%
CTAGACAAAAAGGTGAAAAA+GGG + chr6.2:8328724-8328743 MS.gene031105:CDS 30.0%
GAGAAAGAAATATGCAACAA+TGG + chr6.2:8328535-8328554 MS.gene031105:CDS 30.0%
GGAACCATATTCCAAAAAAT+GGG + chr6.2:8328993-8329012 MS.gene031105:intron 30.0%
TAACAATGTGCTAGACAAAT+CGG - chr6.2:8328921-8328940 None:intergenic 30.0%
TCATTAGTGAGAGATTAACT+TGG + chr6.2:8330026-8330045 MS.gene031105:intron 30.0%
TCCAATGAACAATTACAGTA+TGG - chr6.2:8330254-8330273 None:intergenic 30.0%
TCCATACTGTAATTGTTCAT+TGG + chr6.2:8330250-8330269 MS.gene031105:CDS 30.0%
TGGAACCATATTCCAAAAAA+TGG + chr6.2:8328992-8329011 MS.gene031105:intron 30.0%
TTCAAAAATGAGTGGAAGAT+GGG - chr6.2:8329066-8329085 None:intergenic 30.0%
TTTCAAAAATGAGTGGAAGA+TGG - chr6.2:8329067-8329086 None:intergenic 30.0%
! TTGTTACTGGAGTTTTTGTT+AGG - chr6.2:8328878-8328897 None:intergenic 30.0%
!! ATAAATTTGGTTGGTGAAAG+AGG + chr6.2:8330500-8330519 MS.gene031105:CDS 30.0%
!! ATAACTTTGGTTGATGAAAG+AGG + chr6.2:8330338-8330357 MS.gene031105:CDS 30.0%
!! TAAATTTGGTTGGTGAAAGA+GGG + chr6.2:8330501-8330520 MS.gene031105:CDS 30.0%
!! TAACTTTGGTTGATGAAAGA+GGG + chr6.2:8330339-8330358 MS.gene031105:CDS 30.0%
!!! CACCAAAATATCGTTGATTT+TGG - chr6.2:8329348-8329367 None:intergenic 30.0%
!!! GAAACCCATTTTTTGGAATA+TGG - chr6.2:8329000-8329019 None:intergenic 30.0%
!!! TGATTCAGAAACCCATTTTT+TGG - chr6.2:8329007-8329026 None:intergenic 30.0%
AATGATGTTAGAGCAAACCT+TGG + chr6.2:8330545-8330564 MS.gene031105:CDS 35.0%
AATGGTGATTCTACTGAGAA+AGG + chr6.2:8328553-8328572 MS.gene031105:CDS 35.0%
ACATTCATAAATTTCAGGGG+TGG + chr6.2:8330092-8330111 MS.gene031105:intron 35.0%
ACCAACCAAATTTATCTCAG+AGG - chr6.2:8330495-8330514 None:intergenic 35.0%
ACTGAGAAAGGGTTGAAAAA+AGG + chr6.2:8328565-8328584 MS.gene031105:CDS 35.0%
ATAAATTTCAGGGGTGGTAT+TGG + chr6.2:8330098-8330117 MS.gene031105:intron 35.0%
ATAAGGTTGGAAGTTGTTCA+CGG - chr6.2:8329844-8329863 None:intergenic 35.0%
ATCAACCAAAGTTATCTCAG+AGG - chr6.2:8330333-8330352 None:intergenic 35.0%
ATCTGATAAGTCTCATCAGA+TGG - chr6.2:8330215-8330234 None:intergenic 35.0%
ATCTGATGAGACTTATCAGA+TGG + chr6.2:8330214-8330233 MS.gene031105:CDS 35.0%
ATGGTGATTCTACTGAGAAA+GGG + chr6.2:8328554-8328573 MS.gene031105:CDS 35.0%
CCAACCAAATTTATCTCAGA+GGG - chr6.2:8330494-8330513 None:intergenic 35.0%
CCTAGACAAAAAGGTGAAAA+AGG + chr6.2:8328723-8328742 MS.gene031105:CDS 35.0%
GATGAATCACCTAGACAAAA+AGG + chr6.2:8328714-8328733 MS.gene031105:CDS 35.0%
TCAACCAAAGTTATCTCAGA+GGG - chr6.2:8330332-8330351 None:intergenic 35.0%
TGATATGATACCATAGCCAT+AGG - chr6.2:8330137-8330156 None:intergenic 35.0%
TTATAGAGAGACGTTGTTAC+TGG - chr6.2:8328891-8328910 None:intergenic 35.0%
! TTCTCTCTTTTCCATACCAA+TGG - chr6.2:8329772-8329791 None:intergenic 35.0%
!! AGTGTTTTGGATAGAGACAA+TGG - chr6.2:8328948-8328967 None:intergenic 35.0%
!! ATTTGTTGATAGTCCATGGT+TGG - chr6.2:8330188-8330207 None:intergenic 35.0%
!! CCTTTTTCACCTTTTTGTCT+AGG - chr6.2:8328726-8328745 None:intergenic 35.0%
!! TGGAATTTGTTGATAGTCCA+TGG - chr6.2:8330192-8330211 None:intergenic 35.0%
!!! CGATATTTTGGTGCTATAGT+TGG + chr6.2:8329355-8329374 MS.gene031105:intron 35.0%
!!! TCGTTGATTTTGGAAAGCAT+CGG - chr6.2:8329338-8329357 None:intergenic 35.0%
AAGGGTTGAAAAAAGGTCCA+TGG + chr6.2:8328572-8328591 MS.gene031105:CDS 40.0%
AATGTGCTAGACAAATCGGA+AGG - chr6.2:8328917-8328936 None:intergenic 40.0%
ACTCACACATCAATGGATGT+TGG - chr6.2:8329926-8329945 None:intergenic 40.0%
ACTCTCTAGTGTTTCAAGCA+TGG - chr6.2:8330441-8330460 None:intergenic 40.0%
ATCATGCCATCAAGAACCAT+TGG + chr6.2:8329753-8329772 MS.gene031105:CDS 40.0%
ATGTATGAACACTCTTGCAG+TGG - chr6.2:8330164-8330183 None:intergenic 40.0%
ATTTATCTCAGAGGGATGCA+TGG - chr6.2:8330486-8330505 None:intergenic 40.0%
CAATATCCATTGAGTCACCA+AGG - chr6.2:8330565-8330584 None:intergenic 40.0%
CTCACACATCAATGGATGTT+GGG - chr6.2:8329925-8329944 None:intergenic 40.0%
CTTGCTTCTTCTTCACTGAA+TGG - chr6.2:8328751-8328770 None:intergenic 40.0%
GCTTGAAACACTAGAGAGTT+GGG + chr6.2:8330442-8330461 MS.gene031105:CDS 40.0%
GGAGATGTCAACTAATTAGC+CGG + chr6.2:8329093-8329112 MS.gene031105:intron 40.0%
GGCGACTTAATGGAAAATGA+TGG + chr6.2:8330404-8330423 MS.gene031105:CDS 40.0%
GTCTCTATCCAAAACACTTG+TGG + chr6.2:8328950-8328969 MS.gene031105:intron 40.0%
GTGTTCATACATTCCAACCA+TGG + chr6.2:8330172-8330191 MS.gene031105:CDS 40.0%
TCACACATCAATGGATGTTG+GGG - chr6.2:8329924-8329943 None:intergenic 40.0%
TCCATACCAATGGTTCTTGA+TGG - chr6.2:8329762-8329781 None:intergenic 40.0%
TGATAAGTCTCATCAGATGG+TGG - chr6.2:8330212-8330231 None:intergenic 40.0%
TGCTTGAAACACTAGAGAGT+TGG + chr6.2:8330441-8330460 MS.gene031105:CDS 40.0%
TTTATCTCAGAGGGATGCAT+GGG - chr6.2:8330485-8330504 None:intergenic 40.0%
! CATTTTCCATTAAGTCGCCA+TGG - chr6.2:8330403-8330422 None:intergenic 40.0%
! CTTGAGATCCACAAGTGTTT+TGG - chr6.2:8328961-8328980 None:intergenic 40.0%
! GTAGAAGTTGTCGTTTGAGA+TGG + chr6.2:8328692-8328711 MS.gene031105:CDS 40.0%
! TCATCCTCTTCTTTTGACCA+TGG - chr6.2:8328592-8328611 None:intergenic 40.0%
!! ACTAAAGTGTTGGCAATGCT+CGG + chr6.2:8330289-8330308 MS.gene031105:CDS 40.0%
!! CCCTCTGAGATAAATTTGGT+TGG + chr6.2:8330491-8330510 MS.gene031105:CDS 40.0%
!! GCATCCCTCTGAGATAAATT+TGG + chr6.2:8330487-8330506 MS.gene031105:CDS 40.0%
AAAAGGCCGACTAGCAACTA+AGG - chr6.2:8329640-8329659 None:intergenic 45.0%
AATGCAGGTCTTAGCAGATG+TGG + chr6.2:8328670-8328689 MS.gene031105:CDS 45.0%
AGCATACCATGGCGACTTAA+TGG + chr6.2:8330394-8330413 MS.gene031105:CDS 45.0%
AGGTCCATGGTCAAAAGAAG+AGG + chr6.2:8328585-8328604 MS.gene031105:CDS 45.0%
AGTGTGCCTTAGTTGCTAGT+CGG + chr6.2:8329631-8329650 MS.gene031105:intron 45.0%
ATGGCATGATCTGTTCTTCC+TGG - chr6.2:8329743-8329762 None:intergenic 45.0%
GAAACACTAGAGAGTTGGGA+AGG + chr6.2:8330446-8330465 MS.gene031105:CDS 45.0%
GACAGCAATTTCACTCCACT+TGG - chr6.2:8328803-8328822 None:intergenic 45.0%
GATACCATAGCCATAGGTGT+AGG - chr6.2:8330131-8330150 None:intergenic 45.0%
GCCATCAAGAACCATTGGTA+TGG + chr6.2:8329758-8329777 MS.gene031105:CDS 45.0%
GTCTCTGAGTTACGTACTGT+TGG + chr6.2:8328775-8328794 MS.gene031105:CDS 45.0%
TACGTACTGTTGGATCCAAG+TGG + chr6.2:8328785-8328804 MS.gene031105:CDS 45.0%
TATGAACACTCTTGCAGTGG+AGG - chr6.2:8330161-8330180 None:intergenic 45.0%
TGGAACTTCTCCTACACCTA+TGG + chr6.2:8330118-8330137 MS.gene031105:CDS 45.0%
TTCTCCTACACCTATGGCTA+TGG + chr6.2:8330124-8330143 MS.gene031105:CDS 45.0%
TTCTCTTTGTCACAGCTTCC+AGG + chr6.2:8329722-8329741 MS.gene031105:intron 45.0%
! AGCAAACCTTGGTGACTCAA+TGG + chr6.2:8330556-8330575 MS.gene031105:CDS 45.0%
!! GGAAAGCATCGGCCAAAAAT+TGG - chr6.2:8329327-8329346 None:intergenic 45.0%
!! TTATATTTATATTATCTATA+AGG + chr6.2:8329133-8329152 MS.gene031105:intron 5.0%
GTGCTAGACAAATCGGAAGG+AGG - chr6.2:8328914-8328933 None:intergenic 50.0%
GTGGAGTGAAATTGCTGTCC+AGG + chr6.2:8328804-8328823 MS.gene031105:CDS 50.0%
!! GGGTCCCTCTGAGATAACTT+TGG + chr6.2:8330325-8330344 MS.gene031105:CDS 50.0%
ATGCTCGGATGCTACTCGCA+TGG + chr6.2:8330304-8330323 MS.gene031105:CDS 55.0%
TGCTCGGATGCTACTCGCAT+GGG + chr6.2:8330305-8330324 MS.gene031105:CDS 55.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 8328520 8330646 8328520 ID=MS.gene031105
chr6.2 mRNA 8328520 8330646 8328520 ID=MS.gene031105.t1;Parent=MS.gene031105
chr6.2 exon 8328520 8328825 8328520 ID=MS.gene031105.t1.exon1;Parent=MS.gene031105.t1
chr6.2 CDS 8328520 8328825 8328520 ID=cds.MS.gene031105.t1;Parent=MS.gene031105.t1
chr6.2 exon 8329737 8329939 8329737 ID=MS.gene031105.t1.exon2;Parent=MS.gene031105.t1
chr6.2 CDS 8329737 8329939 8329737 ID=cds.MS.gene031105.t1;Parent=MS.gene031105.t1
chr6.2 exon 8330109 8330646 8330109 ID=MS.gene031105.t1.exon3;Parent=MS.gene031105.t1
chr6.2 CDS 8330109 8330646 8330109 ID=cds.MS.gene031105.t1;Parent=MS.gene031105.t1
Gene Sequence

>MS.gene031105

ATGTCTTCATCTAAGGAGAAAGAAATATGCAACAATGGTGATTCTACTGAGAAAGGGTTGAAAAAAGGTCCATGGTCAAAAGAAGAGGATGAAATATTGATAGCATATATGACAAAAAATGAACCGAAAAATTGGAATTCAGTATCAAAAAATGCAGGTCTTAGCAGATGTGGTAGAAGTTGTCGTTTGAGATGGATGAATCACCTAGACAAAAAGGTGAAAAAGGGTCCATTCAGTGAAGAAGAAGCAAGAATAGTCTCTGAGTTACGTACTGTTGGATCCAAGTGGAGTGAAATTGCTGTCCAGGTATTTATCTTTACATAAATATTTTTTTTTAAGAATTCATGTGCAATAACCTAACAAAAACTCCAGTAACAACGTCTCTCTATAACCTCCTTCCGATTTGTCTAGCACATTGTTATCTTCCATTGTCTCTATCCAAAACACTTGTGGATCTCAAGTAATCAAAAAATGGAACCATATTCCAAAAAATGGGTTTCTGAATCATCTTCATCTCAAGCTATATCATCTTTTCACATCTGTCCCATCTTCCACTCATTTTTGAAAAAAATTGGAGATGTCAACTAATTAGCCGGCTTTCTTATATTGCATCTTATATTTATATTATCTATAAGGCAATATATATGTTACGTTAAAAAATAATAATTTGGCAGATGCTTTAAATCAAATCAAAATAAATAATTCAAATAATCTATTTACTTTAAATACTACTACTATTTTCATTTGTCAAAATTAAAAATCAGTAATTATTTGAATTAATATTAACAAATTAATAAATAAAATCCAATTTTTGGCCGATGCTTTCCAAAATCAACGATATTTTGGTGCTATAGTTGGATTAGTTAATTTTTTGACAAATCAATAATAATCTCATGCACTTAATTAATTAAAAAGTGTTGATTGCTCTCCAAAAACATTTATTTTTTGTACACTCTAGTTAGATATTGAACTTTTGACCACATTATTGTATTTACCACTTGTGTAACTTTGTTTGTTATTTAGATTAGTTTCTATCTTTTACATAACTTATTGAAACAAATTTATTAGTTAGCACAATTTGTGCTATGAGTTTGAAGCCATTTTTAATGTTAGTGTGCCTTAGTTGCTAGTCGGCCTTTTTGTTTGCAAATAGATTTTTGTGTTGTTGTATTAGAATTGGAGCTATCATTAATTTGCATTCGTTCTCTTTGTCACAGCTTCCAGGAAGAACAGATCATGCCATCAAGAACCATTGGTATGGAAAAGAGAGAAAAAGAAAAAGAAATTTAGAAAAGCATGATGATGTGTTAAACAAAAACAACCGTGAACAACTTCCAACCTTATGTGATTCAAATATGTTGTACAATGATGTGGGAAGTACTTCTATGAGCAATCATACTGCCCCAACATCCATTGATGTGTGAGTAGATTATGCATTACCATTGTCTTTTCTAAAATTCAAATTATTTGTTAAATTGTTTTTATATATACATATGAGGTGTCAGCTCATTAGTGAGAGATTAACTTGGTAAAATATCTATCCCCGTTACTAATAATGTTAAATTTAATGTTACATTCATAAATTTCAGGGGTGGTATTGGAACTTCTCCTACACCTATGGCTATGGTATCATATCAACCTCCACTGCAAGAGTGTTCATACATTCCAACCATGGACTATCAACAAATTCCACCATCTGATGAGACTTATCAGATGGCAGAATCAATTTTTCCATACTGTAATTGTTCATTGGAGTCCATATTAGATACACTAAAGTGTTGGCAATGCTCGGATGCTACTCGCATGGGTCCCTCTGAGATAACTTTGGTTGATGAAAGAGGGAAGAAACCTATTTCTCTAGAAAATTATGTTGAAGCATACCATGGCGACTTAATGGAAAATGATGGTTTATTGGAGTCCATGCTTGAAACACTAGAGAGTTGGGAAGGTTCACATGCTACTCCCATGCATCCCTCTGAGATAAATTTGGTTGGTGAAAGAGGGAAGAAACCAATTTCTCTAGAAAATGATGTTAGAGCAAACCTTGGTGACTCAATGGATATTGAGAAATTGCGTGAATCGTTACTGCTTTTCACACAACAATATGACAACAATAACTTTGCATGA
Protein sequence

>MS.gene031105.t1

MSSSKEKEICNNGDSTEKGLKKGPWSKEEDEILIAYMTKNEPKNWNSVSKNAGLSRCGRSCRLRWMNHLDKKVKKGPFSEEEARIVSELRTVGSKWSEIAVQLPGRTDHAIKNHWYGKERKRKRNLEKHDDVLNKNNREQLPTLCDSNMLYNDVGSTSMSNHTAPTSIDVGGIGTSPTPMAMVSYQPPLQECSYIPTMDYQQIPPSDETYQMAESIFPYCNCSLESILDTLKCWQCSDATRMGPSEITLVDERGKKPISLENYVEAYHGDLMENDGLLESMLETLESWEGSHATPMHPSEINLVGERGKKPISLENDVRANLGDSMDIEKLRESLLLFTQQYDNNNFA