AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene031108

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene031108.t1 MTR_5g088610 49.310 290 115 7 21 294 10 283 1.13e-61 200
MS.gene031108.t1 MTR_5g062790 43.131 313 126 13 21 306 10 297 2.38e-53 177
MS.gene031108.t1 MTR_5g088080 40.397 302 114 9 21 305 13 265 5.80e-49 164
MS.gene031108.t1 MTR_5g088150 40.397 302 114 9 21 305 13 265 5.80e-49 164
MS.gene031108.t1 MTR_5g488210 40.397 302 114 9 21 305 13 265 5.80e-49 164
MS.gene031108.t1 MTR_5g088640 41.176 306 106 11 21 305 13 265 1.77e-48 163
MS.gene031108.t1 MTR_1g085770 40.411 292 127 9 18 281 9 281 2.98e-45 156
MS.gene031108.t1 MTR_5g488170 47.115 208 88 5 21 213 13 213 4.86e-45 153
MS.gene031108.t1 MTR_6g013135 44.758 248 80 7 98 306 143 372 1.07e-44 157
MS.gene031108.t1 MTR_4g128190 37.143 280 101 10 18 281 9 229 2.62e-38 136
MS.gene031108.t1 MTR_5g029840 55.140 107 47 1 17 122 9 115 2.43e-33 125
MS.gene031108.t1 MTR_1g085880 44.737 190 86 7 18 192 9 194 1.80e-32 119
MS.gene031108.t1 MTR_3g011610 46.565 131 63 3 12 139 27 153 2.36e-32 125
MS.gene031108.t1 MTR_3g052450 55.046 109 48 1 17 124 37 145 2.42e-32 125
MS.gene031108.t1 MTR_7g076740 46.715 137 63 3 17 143 9 145 2.57e-32 122
MS.gene031108.t1 MTR_8g042410 37.379 206 80 6 20 185 37 233 3.65e-32 125
MS.gene031108.t1 MTR_2g011660 54.286 105 47 1 19 122 12 116 8.98e-32 121
MS.gene031108.t1 MTR_3g052430 54.717 106 47 1 20 124 41 146 1.15e-31 124
MS.gene031108.t1 MTR_0008s0390 50.476 105 51 1 19 122 12 116 2.45e-31 118
MS.gene031108.t1 MTR_1g043080 52.336 107 50 1 17 122 9 115 3.02e-31 118
MS.gene031108.t1 MTR_1g021230 47.761 134 65 2 20 152 57 186 3.11e-31 122
MS.gene031108.t1 MTR_1g043050 51.818 110 52 1 17 125 9 118 4.04e-31 117
MS.gene031108.t1 MTR_4g091490 53.333 105 48 1 19 122 12 116 4.21e-31 120
MS.gene031108.t1 MTR_1g062940 53.846 104 47 1 20 122 6 109 7.92e-31 115
MS.gene031108.t1 MTR_0251s0050 49.524 105 52 1 19 122 12 116 1.53e-30 116
MS.gene031108.t1 MTR_0008s0470 49.524 105 52 1 19 122 12 116 2.50e-30 116
MS.gene031108.t1 MTR_1g085040 52.294 109 51 1 17 124 9 117 4.33e-30 117
MS.gene031108.t1 MTR_2g089620 52.336 107 50 1 17 122 9 115 4.68e-30 116
MS.gene031108.t1 MTR_2g089420 51.429 105 50 1 19 122 10 114 5.84e-30 118
MS.gene031108.t1 MTR_1g085640 52.294 109 51 1 17 124 9 117 1.12e-29 116
MS.gene031108.t1 MTR_7g110830 52.830 106 49 1 20 124 12 117 4.08e-29 114
MS.gene031108.t1 MTR_8g031360 51.887 106 49 2 19 122 12 117 4.34e-29 113
MS.gene031108.t1 MTR_2g088170 48.889 135 64 2 19 152 28 158 4.77e-29 115
MS.gene031108.t1 MTR_5g042030 52.381 105 49 1 19 122 6 110 6.88e-29 112
MS.gene031108.t1 MTR_1g100653 49.533 107 53 1 19 124 11 117 8.16e-29 112
MS.gene031108.t1 MTR_2g097910 47.222 108 56 1 20 126 20 127 1.01e-28 112
MS.gene031108.t1 MTR_3g074520 47.664 107 55 1 17 122 9 115 1.14e-28 113
MS.gene031108.t1 MTR_6g090405 52.381 105 48 2 20 122 12 116 1.81e-28 110
MS.gene031108.t1 MTR_1g076150 51.429 105 50 1 19 122 11 115 1.81e-28 110
MS.gene031108.t1 MTR_2g089450 50.000 104 51 1 19 121 11 114 2.14e-28 110
MS.gene031108.t1 MTR_2g099740 44.628 121 64 2 17 134 9 129 2.58e-28 113
MS.gene031108.t1 MTR_7g111290 55.670 97 42 1 20 115 12 108 2.65e-28 112
MS.gene031108.t1 MTR_1g110460 43.200 125 68 2 1 124 9 131 4.58e-28 110
MS.gene031108.t1 MTR_8g017440 47.664 107 55 1 17 122 9 115 5.05e-28 111
MS.gene031108.t1 MTR_3g461490 49.038 104 52 1 20 122 12 115 7.59e-28 110
MS.gene031108.t1 MTR_4g102380 49.524 105 52 1 19 122 11 115 7.88e-28 109
MS.gene031108.t1 MTR_2g064160 46.729 107 56 1 17 122 8 114 1.15e-27 109
MS.gene031108.t1 MTR_3g065440 48.246 114 55 2 19 131 11 121 1.24e-27 109
MS.gene031108.t1 MTR_4g029540 47.863 117 55 3 14 128 8 120 1.37e-27 109
MS.gene031108.t1 MTR_5g007370 40.127 157 81 4 17 164 9 161 1.50e-27 109
MS.gene031108.t1 MTR_7g096930 50.476 105 51 1 19 122 11 115 1.52e-27 108
MS.gene031108.t1 MTR_5g078140 48.246 114 55 2 19 131 11 121 1.55e-27 109
MS.gene031108.t1 MTR_3g077110 36.478 159 99 2 16 173 8 165 1.61e-27 110
MS.gene031108.t1 MTR_0063s0090 37.297 185 103 6 15 192 7 185 1.68e-27 107
MS.gene031108.t1 MTR_8g017500 46.729 107 56 1 17 122 9 115 1.84e-27 110
MS.gene031108.t1 MTR_6g012690 42.188 128 70 2 19 145 11 135 1.87e-27 110
MS.gene031108.t1 MTR_7g115650 46.364 110 58 1 19 127 11 120 1.90e-27 106
MS.gene031108.t1 MTR_4g057635 52.381 105 48 2 20 122 12 116 1.93e-27 109
MS.gene031108.t1 MTR_5g014990 49.565 115 48 3 20 124 12 126 1.94e-27 108
MS.gene031108.t1 MTR_7g011170 41.538 130 72 2 19 147 11 137 2.04e-27 108
MS.gene031108.t1 MTR_2g096380 41.129 124 72 1 16 138 2 125 2.06e-27 107
MS.gene031108.t1 MTR_2g095520 55.102 98 42 2 20 115 12 109 2.40e-27 108
MS.gene031108.t1 MTR_4g082290 43.548 124 66 2 19 141 11 131 2.48e-27 110
MS.gene031108.t1 MTR_4g065017 48.148 108 55 1 20 126 17 124 2.57e-27 109
MS.gene031108.t1 MTR_4g105130 47.222 108 56 1 16 122 8 115 3.53e-27 109
MS.gene031108.t1 MTR_0008s0280 48.624 109 54 2 15 121 6 114 3.70e-27 106
MS.gene031108.t1 MTR_4g478180 48.598 107 54 1 17 122 10 116 4.57e-27 108
MS.gene031108.t1 MTR_1g073170 50.000 106 52 1 21 125 21 126 6.22e-27 106
MS.gene031108.t1 MTR_3g028740 45.283 106 57 1 20 124 22 127 6.52e-27 108
MS.gene031108.t1 MTR_3g103570 49.565 115 48 3 20 124 12 126 6.86e-27 108
MS.gene031108.t1 MTR_8g017540 46.729 107 56 1 17 122 55 161 6.93e-27 109
MS.gene031108.t1 MTR_4g097570 54.082 98 43 2 20 115 12 109 7.85e-27 107
MS.gene031108.t1 MTR_8g095390 53.684 95 43 1 22 115 14 108 9.03e-27 107
MS.gene031108.t1 MTR_7g102110 42.029 138 76 4 20 155 12 147 9.49e-27 106
MS.gene031108.t1 MTR_1g112760 40.146 137 80 2 16 151 9 144 1.45e-26 105
MS.gene031108.t1 MTR_1g083630 43.860 171 84 5 11 179 3 163 1.78e-26 109
MS.gene031108.t1 MTR_4g063100 48.077 104 53 1 21 123 8 111 2.02e-26 105
MS.gene031108.t1 MTR_4g019370 51.961 102 47 2 22 122 38 138 2.12e-26 107
MS.gene031108.t1 MTR_7g035075 45.872 109 58 1 20 127 14 122 2.46e-26 103
MS.gene031108.t1 MTR_6g006030 41.481 135 68 3 6 131 2 134 2.47e-26 103
MS.gene031108.t1 MTR_8g098860 44.954 109 59 1 17 124 9 117 2.75e-26 106
MS.gene031108.t1 MTR_1g017140 50.476 105 50 2 20 122 12 116 3.21e-26 106
MS.gene031108.t1 MTR_5g010020 48.000 100 51 1 17 115 9 108 3.44e-26 106
MS.gene031108.t1 MTR_1g086530 45.872 109 58 1 20 127 33 141 3.53e-26 105
MS.gene031108.t1 MTR_4g082230 42.276 123 67 2 20 141 12 131 3.73e-26 107
MS.gene031108.t1 MTR_2g067420 53.608 97 44 1 20 115 14 110 4.16e-26 105
MS.gene031108.t1 MTR_1g045610 47.273 110 57 1 17 125 18 127 6.16e-26 103
MS.gene031108.t1 MTR_4g073420 48.571 105 53 1 22 125 14 118 9.25e-26 103
MS.gene031108.t1 MTR_1g017000 47.619 105 53 2 20 122 12 116 1.07e-25 103
MS.gene031108.t1 MTR_0140s0030 41.176 136 69 3 19 153 12 137 1.18e-25 104
MS.gene031108.t1 MTR_0489s0020 41.176 136 69 3 19 153 12 137 1.18e-25 104
MS.gene031108.t1 MTR_4g121460 47.748 111 57 1 19 128 11 121 1.48e-25 104
MS.gene031108.t1 MTR_4g485530 47.059 102 53 1 22 122 14 115 1.89e-25 100
MS.gene031108.t1 MTR_4g128670 53.061 98 44 2 20 115 12 109 2.00e-25 104
MS.gene031108.t1 MTR_1g100667 49.515 103 51 1 21 122 14 116 2.10e-25 102
MS.gene031108.t1 MTR_3g039990 43.363 113 63 1 19 130 12 124 2.84e-25 103
MS.gene031108.t1 MTR_4g097570 53.535 99 43 3 20 115 12 110 3.22e-25 102
MS.gene031108.t1 MTR_8g017390 42.623 122 64 3 10 129 6 123 3.87e-25 105
MS.gene031108.t1 MTR_5g079670 43.363 113 60 2 20 131 11 120 4.00e-25 100
MS.gene031108.t1 MTR_6g055910 48.077 104 53 1 21 123 15 118 4.23e-25 102
MS.gene031108.t1 MTR_8g017340 48.571 105 52 2 20 122 12 116 4.69e-25 105
MS.gene031108.t1 MTR_3g097450 51.579 95 45 1 22 115 14 108 4.86e-25 102
MS.gene031108.t1 MTR_1g086510 41.071 112 65 1 17 127 18 129 6.03e-25 101
MS.gene031108.t1 MTR_3g083540 50.000 98 48 1 19 115 40 137 7.02e-25 102
MS.gene031108.t1 MTR_5g082910 52.727 110 49 3 8 115 4 112 8.29e-25 101
MS.gene031108.t1 MTR_6g009430 45.133 113 58 2 20 131 12 121 1.03e-24 102
MS.gene031108.t1 MTR_4g100720 40.517 116 68 1 14 128 7 122 1.31e-24 98.2
MS.gene031108.t1 MTR_8g017350 47.619 105 53 2 20 122 12 116 1.41e-24 104
MS.gene031108.t1 MTR_7g087130 45.872 109 58 1 19 126 11 119 1.64e-24 101
MS.gene031108.t1 MTR_8g006470 46.364 110 57 2 17 124 7 116 2.02e-24 100
MS.gene031108.t1 MTR_7g010210 43.925 107 59 1 17 122 9 115 2.29e-24 100
MS.gene031108.t1 MTR_2g034790 45.946 111 59 1 19 128 11 121 2.68e-24 100
MS.gene031108.t1 MTR_8g027345 48.980 98 49 1 19 115 11 108 3.16e-24 100
MS.gene031108.t1 MTR_7g010210 43.925 107 59 1 17 122 9 115 3.36e-24 100
MS.gene031108.t1 MTR_6g012180 45.000 100 54 1 17 115 9 108 3.48e-24 100
MS.gene031108.t1 MTR_7g117730 42.857 112 63 1 19 129 11 122 5.45e-24 98.6
MS.gene031108.t1 MTR_3g089045 44.275 131 68 4 18 145 12 140 1.84e-23 98.2
MS.gene031108.t1 MTR_6g027340 39.831 118 68 3 11 126 4 120 2.93e-23 95.5
MS.gene031108.t1 MTR_6g074860 36.478 159 73 4 22 153 4 161 3.97e-23 95.9
MS.gene031108.t1 MTR_7g109320 40.690 145 79 3 19 162 11 149 5.95e-23 97.8
MS.gene031108.t1 MTR_6g027360 41.176 119 65 4 11 126 66 182 6.29e-23 97.1
MS.gene031108.t1 MTR_5g016510 49.020 102 50 2 22 122 5 105 1.60e-22 95.9
MS.gene031108.t1 MTR_4g094982 46.226 106 55 2 22 126 5 109 2.86e-22 94.4
MS.gene031108.t1 MTR_8g020490 47.475 99 51 1 18 115 6 104 4.78e-22 93.2
MS.gene031108.t1 MTR_3g101290 46.078 102 53 2 22 122 37 137 1.03e-21 91.7
MS.gene031108.t1 MTR_2g033170 41.964 112 64 1 17 127 21 132 1.16e-21 93.6
MS.gene031108.t1 MTR_3g463400 45.714 105 53 3 20 122 131 233 1.27e-21 95.1
MS.gene031108.t1 MTR_5g078860 43.396 106 59 1 18 122 5 110 1.65e-21 92.8
MS.gene031108.t1 MTR_5g079220 39.655 116 64 2 8 122 14 124 1.94e-21 92.0
MS.gene031108.t1 MTR_5g079290 40.741 108 63 1 16 122 13 120 2.08e-21 91.7
MS.gene031108.t1 MTR_5g070020 46.667 105 52 3 20 122 120 222 2.81e-21 93.2
MS.gene031108.t1 MTR_0193s0090 40.385 104 61 1 19 121 6 109 3.03e-21 90.1
MS.gene031108.t1 MTR_5g049190 42.149 121 65 4 22 139 19 137 4.03e-21 90.5
MS.gene031108.t1 MTR_5g078950 41.346 104 60 1 18 120 5 108 4.04e-21 90.9
MS.gene031108.t1 MTR_6g015455 51.579 95 44 2 22 115 5 98 4.85e-21 94.4
MS.gene031108.t1 MTR_5g078910 42.453 106 60 1 18 122 5 110 5.02e-21 91.7
MS.gene031108.t1 MTR_5g010650 51.546 97 45 2 20 115 108 203 7.55e-21 92.8
MS.gene031108.t1 MTR_7g061330 46.154 104 54 2 20 122 111 213 9.17e-21 92.8
MS.gene031108.t1 MTR_7g461410 46.154 104 54 2 20 122 111 213 9.17e-21 92.8
MS.gene031108.t1 MTR_7g061330 46.154 104 54 2 20 122 75 177 9.75e-21 92.8
MS.gene031108.t1 MTR_4g125520 38.053 113 69 1 17 128 9 121 1.02e-20 90.9
MS.gene031108.t1 MTR_5g079120 41.121 107 62 1 17 122 58 164 2.98e-20 89.4
MS.gene031108.t1 MTR_8g060940 42.424 99 56 1 19 116 6 104 3.30e-20 88.2
MS.gene031108.t1 MTR_3g077650 42.241 116 63 3 22 136 181 293 3.45e-20 90.9
MS.gene031108.t1 MTR_5g078930 42.708 96 54 1 21 115 10 105 3.95e-20 87.4
MS.gene031108.t1 MTR_1g026870 39.344 122 72 2 20 140 83 203 3.99e-20 91.3
MS.gene031108.t1 MTR_7g037260 43.363 113 62 2 22 133 145 256 4.24e-20 89.7
MS.gene031108.t1 MTR_3g110028 40.708 113 65 2 20 131 83 194 4.86e-20 91.3
MS.gene031108.t1 MTR_7g037130 43.363 113 62 2 22 133 145 256 6.33e-20 89.4
MS.gene031108.t1 MTR_0247s0040 40.816 98 57 1 19 115 6 103 6.61e-20 85.9
MS.gene031108.t1 MTR_7g450950 41.284 109 60 3 22 128 157 263 7.84e-20 88.6
MS.gene031108.t1 MTR_5g078800 40.566 106 62 1 18 122 5 110 8.28e-20 87.4
MS.gene031108.t1 MTR_4g088015 44.554 101 54 2 22 121 221 320 9.26e-20 89.4
MS.gene031108.t1 MTR_7g451170 37.956 137 80 3 1 133 167 302 1.30e-19 89.0
MS.gene031108.t1 MTR_4g082040 44.037 109 57 3 18 124 101 207 1.36e-19 89.0
MS.gene031108.t1 MTR_4g123040 41.284 109 63 1 20 127 24 132 1.51e-19 87.4
MS.gene031108.t1 MTR_0001s0360 38.889 108 65 1 16 122 3 110 2.76e-19 85.9
MS.gene031108.t1 MTR_3g045430 41.346 104 60 1 20 122 13 116 4.18e-19 86.3
MS.gene031108.t1 MTR_5g007300 48.649 74 38 0 19 92 63 136 4.21e-19 82.4
MS.gene031108.t1 MTR_5g041570 47.423 97 47 3 22 116 134 228 4.38e-19 87.4
MS.gene031108.t1 MTR_7g061550 31.280 211 128 6 25 221 10 217 4.81e-19 86.7
MS.gene031108.t1 MTR_4g105660 42.373 118 62 4 20 135 178 291 7.11e-19 87.0
MS.gene031108.t1 MTR_7g017260 42.000 100 55 2 19 115 24 123 9.64e-19 84.7
MS.gene031108.t1 MTR_7g086960 45.133 113 57 4 14 124 82 191 2.48e-18 84.7
MS.gene031108.t1 MTR_7g035350 43.299 97 53 2 25 120 228 323 2.43e-17 82.4
MS.gene031108.t1 MTR_0197s0010 41.935 93 53 1 24 115 5 97 4.37e-17 79.3
MS.gene031108.t1 MTR_6g027370 40.385 104 60 2 22 124 99 201 5.41e-17 80.9
MS.gene031108.t1 MTR_1g057980 40.952 105 60 2 17 120 75 178 1.05e-16 79.3
MS.gene031108.t1 MTR_4g063100 51.389 72 34 1 53 123 11 82 1.25e-16 77.8
MS.gene031108.t1 MTR_2g096380 40.187 107 62 2 33 138 1 106 1.47e-16 77.4
MS.gene031108.t1 MTR_7g111290 54.688 64 28 1 53 115 3 66 5.69e-16 77.8
MS.gene031108.t1 MTR_6g055910 47.945 73 37 1 52 123 17 89 6.35e-16 76.3
MS.gene031108.t1 MTR_8g468380 30.952 126 85 2 1 125 1 125 3.32e-13 70.1
MS.gene031108.t1 MTR_0023s0210 41.892 74 43 0 19 92 6 79 4.60e-13 64.3
MS.gene031108.t1 MTR_5g038910 32.710 107 69 3 25 130 29 133 1.62e-11 65.1
MS.gene031108.t1 MTR_5g038910 32.710 107 69 3 25 130 29 133 2.82e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene031108.t1 AT2G32460 48.837 129 61 2 16 143 2 126 1.80e-34 131
MS.gene031108.t1 AT2G32460 49.606 127 59 2 18 143 16 138 2.98e-34 130
MS.gene031108.t1 AT2G26960 50.400 125 57 2 16 139 16 136 9.41e-34 128
MS.gene031108.t1 AT5G55020 51.181 127 54 3 13 138 22 141 1.18e-32 126
MS.gene031108.t1 AT4G28110 54.286 105 47 1 19 122 11 115 4.35e-32 120
MS.gene031108.t1 AT4G26930 50.000 124 54 3 13 135 15 131 6.17e-32 122
MS.gene031108.t1 AT3G11440 48.800 125 59 2 20 143 41 161 8.32e-32 124
MS.gene031108.t1 AT3G11440 48.800 125 59 2 20 143 41 161 1.96e-31 123
MS.gene031108.t1 AT3G11440 48.800 125 59 2 20 143 41 161 1.96e-31 123
MS.gene031108.t1 AT3G11440 48.800 125 59 2 20 143 41 161 1.96e-31 123
MS.gene031108.t1 AT5G06100 48.760 121 57 2 19 138 31 147 3.46e-31 122
MS.gene031108.t1 AT4G05100 53.333 105 48 1 19 122 12 116 4.18e-31 119
MS.gene031108.t1 AT5G06100 48.760 121 57 2 19 138 31 147 8.33e-31 121
MS.gene031108.t1 AT5G06100 48.760 121 57 2 19 138 31 147 8.33e-31 121
MS.gene031108.t1 AT5G06100 48.760 121 57 2 19 138 31 147 8.33e-31 121
MS.gene031108.t1 AT5G06100 48.760 121 57 2 19 138 31 147 8.33e-31 121
MS.gene031108.t1 AT4G21440 52.381 105 49 1 19 122 11 115 1.12e-30 119
MS.gene031108.t1 AT3G61250 51.429 105 50 1 19 122 11 115 1.14e-30 117
MS.gene031108.t1 AT4G17785 53.271 107 49 1 17 122 10 116 3.11e-30 117
MS.gene031108.t1 AT4G17785 53.271 107 49 1 17 122 10 116 3.30e-30 117
MS.gene031108.t1 AT5G16770 42.361 144 70 3 17 159 9 140 4.87e-30 116
MS.gene031108.t1 AT5G16770 42.361 144 70 3 17 159 9 140 4.87e-30 116
MS.gene031108.t1 AT3G53200 48.276 116 57 2 17 129 6 121 8.03e-30 114
MS.gene031108.t1 AT5G16770 42.361 144 70 3 17 159 9 140 8.51e-30 116
MS.gene031108.t1 AT5G16770 42.361 144 70 3 17 159 9 140 8.51e-30 116
MS.gene031108.t1 AT4G01680 52.830 106 49 1 20 124 12 117 1.63e-29 113
MS.gene031108.t1 AT3G23250 47.273 110 57 1 19 127 11 120 1.71e-29 114
MS.gene031108.t1 AT1G34670 50.467 107 52 1 17 122 9 115 2.68e-29 115
MS.gene031108.t1 AT5G65230 44.961 129 67 2 17 144 9 134 2.72e-29 114
MS.gene031108.t1 AT4G01680 52.830 106 49 1 20 124 12 117 3.13e-29 114
MS.gene031108.t1 AT5G54230 50.000 104 51 1 20 122 12 115 3.18e-29 114
MS.gene031108.t1 AT5G10280 34.156 243 112 8 17 220 9 242 4.03e-29 114
MS.gene031108.t1 AT3G12720 50.000 104 51 1 20 122 22 125 7.06e-29 113
MS.gene031108.t1 AT1G57560 52.885 104 48 1 20 122 12 115 7.94e-29 112
MS.gene031108.t1 AT3G02940 50.467 107 52 1 17 122 9 115 7.95e-29 112
MS.gene031108.t1 AT3G02940 50.467 107 52 1 17 122 9 115 1.12e-28 112
MS.gene031108.t1 AT3G02940 50.467 107 52 1 17 122 9 115 1.12e-28 112
MS.gene031108.t1 AT1G16490 52.885 104 48 1 20 122 14 117 1.36e-28 111
MS.gene031108.t1 AT1G57560 52.885 104 48 1 20 122 12 115 1.40e-28 112
MS.gene031108.t1 AT5G26660 48.182 110 56 1 16 124 8 117 3.35e-28 112
MS.gene031108.t1 AT5G15310 48.571 105 53 1 19 122 11 115 5.24e-28 109
MS.gene031108.t1 AT1G06180 51.429 105 50 1 19 122 11 115 8.10e-28 108
MS.gene031108.t1 AT1G66230 46.281 121 64 1 19 138 11 131 9.90e-28 109
MS.gene031108.t1 AT5G15310 48.571 105 53 1 19 122 11 115 1.21e-27 109
MS.gene031108.t1 AT1G79180 52.885 104 48 1 20 122 14 117 1.21e-27 109
MS.gene031108.t1 AT5G15310 48.571 105 53 1 19 122 11 115 1.25e-27 110
MS.gene031108.t1 AT5G12870 48.113 106 54 1 18 122 16 121 1.58e-27 108
MS.gene031108.t1 AT1G48000 35.593 177 79 5 20 189 32 180 1.58e-27 107
MS.gene031108.t1 AT3G13890 46.729 107 56 1 17 122 9 115 1.61e-27 110
MS.gene031108.t1 AT5G56110 49.038 104 52 1 20 122 12 115 2.51e-27 108
MS.gene031108.t1 AT5G14340 46.789 109 57 1 19 126 23 131 2.57e-27 108
MS.gene031108.t1 AT3G08500 47.170 106 55 1 20 124 30 135 2.85e-27 109
MS.gene031108.t1 AT1G09540 50.962 104 50 1 20 122 12 115 3.56e-27 109
MS.gene031108.t1 AT1G18570 48.598 107 54 1 17 122 10 116 5.32e-27 108
MS.gene031108.t1 AT3G49690 49.550 111 54 2 20 128 12 122 5.81e-27 107
MS.gene031108.t1 AT5G16600 47.368 114 56 2 19 131 11 121 7.62e-27 107
MS.gene031108.t1 AT5G23000 53.333 105 47 2 20 122 12 116 8.04e-27 107
MS.gene031108.t1 AT2G31180 47.619 105 54 1 19 122 11 115 8.05e-27 106
MS.gene031108.t1 AT4G22680 48.571 105 53 1 19 122 11 115 8.53e-27 106
MS.gene031108.t1 AT5G60890 47.664 107 55 1 17 122 9 115 8.54e-27 107
MS.gene031108.t1 AT3G01140 47.619 105 54 1 19 122 11 115 1.02e-26 107
MS.gene031108.t1 AT3G24310 46.847 111 58 1 16 125 14 124 1.26e-26 106
MS.gene031108.t1 AT3G01140 47.619 105 54 1 19 122 54 158 1.27e-26 108
MS.gene031108.t1 AT3G13540 47.619 105 54 1 19 122 22 126 1.35e-26 105
MS.gene031108.t1 AT3G27810 44.262 122 67 1 17 137 17 138 1.46e-26 104
MS.gene031108.t1 AT5G57620 53.333 105 47 2 20 122 12 116 1.77e-26 107
MS.gene031108.t1 AT4G38620 50.000 102 50 1 22 122 14 115 1.90e-26 105
MS.gene031108.t1 AT1G56160 50.962 104 50 1 20 122 14 117 2.48e-26 105
MS.gene031108.t1 AT2G36890 50.476 105 50 2 20 122 12 116 2.62e-26 105
MS.gene031108.t1 AT3G28470 49.485 97 48 1 20 115 12 108 3.13e-26 106
MS.gene031108.t1 AT2G26950 39.130 138 79 2 7 143 3 136 3.38e-26 107
MS.gene031108.t1 AT1G63910 45.872 109 58 1 17 124 9 117 3.39e-26 107
MS.gene031108.t1 AT5G61420 48.148 108 55 1 16 122 8 115 3.78e-26 106
MS.gene031108.t1 AT4G37780 50.000 106 51 2 19 122 11 116 4.12e-26 105
MS.gene031108.t1 AT5G65790 49.550 111 54 2 20 128 12 122 4.24e-26 106
MS.gene031108.t1 AT3G30210 46.847 111 58 1 19 128 26 136 4.41e-26 104
MS.gene031108.t1 AT4G01680 47.458 118 49 2 20 124 12 129 4.75e-26 106
MS.gene031108.t1 AT4G12350 45.872 109 58 1 20 127 12 120 5.12e-26 104
MS.gene031108.t1 AT2G36890 50.476 105 50 2 20 122 53 157 5.57e-26 105
MS.gene031108.t1 AT1G68320 32.719 217 117 6 20 221 19 221 6.49e-26 104
MS.gene031108.t1 AT4G13480 48.182 110 56 1 16 124 2 111 6.65e-26 103
MS.gene031108.t1 AT1G74080 49.495 99 49 1 18 115 10 108 6.82e-26 105
MS.gene031108.t1 AT1G74430 46.667 105 55 1 19 122 11 115 7.64e-26 103
MS.gene031108.t1 AT3G01530 48.544 103 52 1 17 118 22 124 9.11e-26 102
MS.gene031108.t1 AT1G18710 45.714 105 56 1 19 122 11 115 1.16e-25 103
MS.gene031108.t1 AT1G25340 42.520 127 67 3 3 126 2 125 1.35e-25 103
MS.gene031108.t1 AT5G40350 48.544 103 52 1 20 121 17 119 1.81e-25 101
MS.gene031108.t1 AT1G22640 50.515 97 47 1 20 115 12 108 1.87e-25 102
MS.gene031108.t1 AT1G35515 49.485 97 48 1 20 115 12 108 2.08e-25 101
MS.gene031108.t1 AT5G07700 47.222 108 56 1 16 122 8 115 2.13e-25 104
MS.gene031108.t1 AT5G07700 47.222 108 56 1 16 122 8 115 2.13e-25 104
MS.gene031108.t1 AT3G12820 50.000 104 51 1 20 122 14 117 2.53e-25 102
MS.gene031108.t1 AT2G47460 46.789 109 57 1 19 126 11 119 3.04e-25 104
MS.gene031108.t1 AT3G62610 50.000 98 48 1 19 115 11 108 3.17e-25 103
MS.gene031108.t1 AT5G07690 48.515 101 51 1 16 115 8 108 3.83e-25 103
MS.gene031108.t1 AT2G47190 41.667 108 62 1 20 126 20 127 4.46e-25 102
MS.gene031108.t1 AT4G34990 50.526 95 46 1 22 115 14 108 4.73e-25 102
MS.gene031108.t1 AT3G50060 54.737 95 41 2 22 115 6 99 4.92e-25 102
MS.gene031108.t1 AT5G14750 37.107 159 89 4 21 177 17 166 6.11e-25 100
MS.gene031108.t1 AT5G62320 48.598 107 47 2 17 115 10 116 6.55e-25 100
MS.gene031108.t1 AT3G46130 46.729 107 56 1 17 122 6 112 7.55e-25 101
MS.gene031108.t1 AT2G39880 42.405 158 73 6 7 153 38 188 7.86e-25 103
MS.gene031108.t1 AT4G09460 49.474 95 47 1 22 115 14 108 9.44e-25 100
MS.gene031108.t1 AT5G59780 45.370 108 58 1 16 122 4 111 9.93e-25 100
MS.gene031108.t1 AT3G13890 43.103 116 56 2 17 122 9 124 1.13e-24 102
MS.gene031108.t1 AT2G16720 47.423 97 50 1 20 115 12 108 1.27e-24 100
MS.gene031108.t1 AT5G49330 48.980 98 49 1 19 115 11 108 1.99e-24 101
MS.gene031108.t1 AT5G40330 41.935 124 65 2 17 139 9 126 4.04e-24 98.2
MS.gene031108.t1 AT3G47600 44.762 105 57 1 19 122 11 115 4.05e-24 100
MS.gene031108.t1 AT3G60460 46.729 107 55 2 20 124 11 117 4.63e-24 99.8
MS.gene031108.t1 AT3G48920 40.411 146 80 2 8 152 6 145 6.62e-24 98.6
MS.gene031108.t1 AT3G55730 50.485 103 47 3 22 122 56 156 7.04e-24 100
MS.gene031108.t1 AT3G06490 45.763 118 63 1 11 127 10 127 9.57e-24 99.4
MS.gene031108.t1 AT5G62470 42.478 113 64 1 19 130 11 123 1.05e-23 99.8
MS.gene031108.t1 AT3G27920 47.917 96 49 1 21 115 15 110 1.18e-23 97.1
MS.gene031108.t1 AT3G28910 44.762 105 57 1 19 122 11 115 1.28e-23 99.0
MS.gene031108.t1 AT1G08810 46.667 105 55 1 19 122 11 115 1.70e-23 97.8
MS.gene031108.t1 AT5G67300 43.590 117 64 2 22 137 6 121 1.78e-23 98.2
MS.gene031108.t1 AT1G79180 41.606 137 46 2 20 122 14 150 2.36e-23 98.6
MS.gene031108.t1 AT1G74650 44.231 104 57 1 20 122 12 115 2.49e-23 98.6
MS.gene031108.t1 AT1G17950 41.935 124 66 3 22 144 5 123 3.34e-23 96.3
MS.gene031108.t1 AT5G11050 47.664 107 52 3 18 122 101 205 5.17e-23 98.6
MS.gene031108.t1 AT3G09230 48.148 108 54 2 22 128 55 161 1.09e-22 97.4
MS.gene031108.t1 AT5G52260 47.573 103 53 1 21 122 13 115 1.73e-22 94.7
MS.gene031108.t1 AT5G62470 42.478 113 63 2 19 130 11 122 2.77e-22 95.9
MS.gene031108.t1 AT4G25560 45.631 103 55 1 21 122 11 113 6.81e-22 93.6
MS.gene031108.t1 AT5G35550 40.164 122 68 2 20 140 14 131 1.05e-21 92.4
MS.gene031108.t1 AT5G58850 47.664 107 52 3 18 122 101 205 1.14e-21 95.1
MS.gene031108.t1 AT5G17800 43.103 116 64 2 14 128 85 199 1.38e-21 93.6
MS.gene031108.t1 AT1G25340 40.157 127 65 4 3 126 2 120 1.74e-21 92.4
MS.gene031108.t1 AT2G23290 52.632 95 43 2 22 115 13 106 2.22e-21 92.8
MS.gene031108.t1 AT4G18770 44.915 118 59 4 20 135 215 328 2.52e-21 94.0
MS.gene031108.t1 AT4G33450 41.379 116 65 3 21 134 18 132 2.59e-21 91.3
MS.gene031108.t1 AT5G49620 27.491 291 158 6 17 297 23 270 3.29e-21 92.0
MS.gene031108.t1 AT5G52600 43.299 97 54 1 20 115 12 108 3.31e-21 89.7
MS.gene031108.t1 AT1G25340 40.157 127 65 4 3 126 2 120 3.61e-21 92.0
MS.gene031108.t1 AT3G09370 33.333 195 122 5 20 210 141 331 3.96e-21 94.0
MS.gene031108.t1 AT4G37260 51.579 95 44 2 22 115 13 106 4.26e-21 92.0
MS.gene031108.t1 AT3G09370 33.333 195 122 5 20 210 133 323 4.42e-21 93.6
MS.gene031108.t1 AT3G09370 33.333 195 122 5 20 210 128 318 4.56e-21 93.6
MS.gene031108.t1 AT3G29020 40.000 110 64 2 16 124 59 167 4.96e-21 90.1
MS.gene031108.t1 AT3G29020 40.000 110 64 2 16 124 61 169 1.15e-20 90.5
MS.gene031108.t1 AT5G40360 43.689 103 56 2 20 121 156 257 2.11e-20 90.5
MS.gene031108.t1 AT5G02320 45.192 104 55 2 20 122 125 227 2.47e-20 91.7
MS.gene031108.t1 AT5G02320 45.192 104 55 2 20 122 125 227 2.47e-20 91.7
MS.gene031108.t1 AT1G73410 45.872 109 55 3 22 128 6 112 2.49e-20 87.4
MS.gene031108.t1 AT5G02320 45.192 104 55 2 20 122 65 167 2.82e-20 91.3
MS.gene031108.t1 AT1G73410 45.872 109 55 3 22 128 6 112 3.84e-20 87.8
MS.gene031108.t1 AT1G69560 42.453 106 57 3 13 116 114 217 4.95e-19 86.7
MS.gene031108.t1 AT3G53200 52.500 80 35 2 53 129 9 88 5.39e-19 84.0
MS.gene031108.t1 AT1G69560 42.453 106 57 3 13 116 98 201 5.68e-19 86.3
MS.gene031108.t1 AT1G66370 42.718 103 58 1 14 115 2 104 6.21e-19 84.7
MS.gene031108.t1 AT4G32730 40.708 113 65 2 20 131 85 196 7.26e-19 87.8
MS.gene031108.t1 AT4G32730 40.708 113 65 2 20 131 85 196 7.26e-19 87.8
MS.gene031108.t1 AT4G32730 40.708 113 65 2 20 131 85 196 7.26e-19 87.8
MS.gene031108.t1 AT4G32730 40.708 113 65 2 20 131 85 196 7.26e-19 87.8
MS.gene031108.t1 AT4G32730 40.708 113 65 2 20 131 85 196 7.75e-19 87.4
MS.gene031108.t1 AT5G11510 37.168 113 69 2 20 131 79 190 7.88e-19 87.4
MS.gene031108.t1 AT1G26780 42.991 107 57 3 20 124 96 200 8.82e-19 85.1
MS.gene031108.t1 AT5G11510 37.168 113 69 2 20 131 79 190 9.01e-19 87.4
MS.gene031108.t1 AT1G26780 42.991 107 57 3 20 124 96 200 9.37e-19 85.9
MS.gene031108.t1 AT5G11510 37.168 113 69 2 20 131 79 190 9.68e-19 87.4
MS.gene031108.t1 AT5G11510 37.168 113 69 2 20 131 79 190 9.68e-19 87.4
MS.gene031108.t1 AT5G11510 37.168 113 69 2 20 131 79 190 9.68e-19 87.4
MS.gene031108.t1 AT1G66380 42.424 99 56 1 18 115 6 104 1.31e-18 81.3
MS.gene031108.t1 AT5G49620 25.902 305 159 6 17 297 23 284 2.67e-18 84.3
MS.gene031108.t1 AT3G27785 40.385 104 60 2 20 122 187 289 6.25e-18 84.3
MS.gene031108.t1 AT1G56650 42.424 99 56 1 18 115 6 104 1.94e-17 80.5
MS.gene031108.t1 AT4G00540 43.966 116 58 4 16 126 97 210 3.72e-17 81.6
MS.gene031108.t1 AT1G66390 42.424 99 56 1 18 115 6 104 4.49e-17 79.7
MS.gene031108.t1 AT4G00540 43.966 116 58 4 16 126 95 208 4.61e-17 81.6
MS.gene031108.t1 AT5G26660 47.945 73 37 1 53 124 14 86 4.29e-16 77.8
MS.gene031108.t1 AT2G25230 41.818 110 59 4 15 121 18 125 8.44e-16 75.9
MS.gene031108.t1 AT5G39700 34.043 141 85 3 23 162 57 190 1.13e-15 74.3
MS.gene031108.t1 AT3G27810 44.186 86 47 1 53 137 4 89 3.62e-15 72.8
MS.gene031108.t1 AT2G37630 43.689 103 55 2 25 124 7 109 6.84e-15 74.7
MS.gene031108.t1 AT5G59780 50.704 71 34 1 53 122 20 90 7.85e-15 72.8
MS.gene031108.t1 AT3G46130 50.704 71 34 1 53 122 10 80 1.09e-14 72.4
MS.gene031108.t1 AT5G40350 50.000 72 35 1 51 121 3 74 1.16e-14 71.2
MS.gene031108.t1 AT3G46130 50.704 71 34 1 53 122 20 90 1.45e-14 72.4
MS.gene031108.t1 AT5G35550 43.333 90 46 2 52 140 49 134 1.97e-14 72.4
MS.gene031108.t1 AT5G14750 50.820 61 29 1 56 115 18 78 8.18e-14 68.9
MS.gene031108.t1 AT5G40430 37.288 118 68 5 7 121 38 152 1.74e-13 69.7
MS.gene031108.t1 AT1G66380 45.455 66 36 0 18 83 6 71 7.11e-13 64.7
MS.gene031108.t1 AT1G14350 34.314 102 65 2 25 125 28 128 1.77e-12 68.2
MS.gene031108.t1 AT1G14350 34.314 102 65 2 25 125 28 128 1.77e-12 68.2
MS.gene031108.t1 AT3G12820 50.000 68 33 1 56 122 2 69 7.86e-12 63.5
MS.gene031108.t1 AT3G47600 43.662 71 39 1 53 122 39 109 8.26e-12 65.5
MS.gene031108.t1 AT2G02820 33.333 102 66 2 25 125 33 133 1.06e-11 65.9
MS.gene031108.t1 AT2G02820 33.333 102 66 2 25 125 33 133 1.57e-11 65.1
MS.gene031108.t1 AT2G02820 33.333 102 66 2 25 125 33 133 2.86e-11 63.9
MS.gene031108.t1 AT3G18100 37.500 96 58 2 21 115 497 591 5.96e-11 63.9
MS.gene031108.t1 AT3G18100 37.500 96 58 2 21 115 545 639 6.58e-11 63.5
MS.gene031108.t1 AT3G18100 37.500 96 58 2 21 115 384 478 7.35e-11 63.5
MS.gene031108.t1 AT3G18100 37.500 96 58 2 21 115 332 426 8.92e-11 63.2

Find 57 sgRNAs with CRISPR-Local

Find 135 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTCACAGATCAATGGATTT+TGG 0.149371 6.2:-8358543 None:intergenic
AACTTTCGAAACTTCTTATC+TGG 0.184228 6.2:-8358456 None:intergenic
ACATCATTTCCGAGAGAATT+TGG 0.215412 6.2:-8358992 None:intergenic
CCTAGACAAAGAAGTGAAAA+AGG 0.225576 6.2:+8356564 MS.gene031108:CDS
CCACTCTCGTGTATTAAATA+TGG 0.288635 6.2:-8358902 None:intergenic
GCGTCCCTCTCAGATAAATT+TGG 0.302815 6.2:+8358949 MS.gene031108:CDS
CACGATAATGTCTTCATCTA+AGG 0.307566 6.2:+8356354 None:intergenic
CTTGCTTCTTCTTCATTGAA+TGG 0.340895 6.2:-8356589 None:intergenic
TATCAATGTCTGAAAACTTT+GGG 0.348639 6.2:-8358789 None:intergenic
GACAACAACTGGTTTGATTA+CGG 0.351859 6.2:+8359103 MS.gene031108:CDS
TCCATACCAATGGTTCTTGA+TGG 0.352879 6.2:-8358310 None:intergenic
ATAAATTTGGTTGATGAAAG+AGG 0.363155 6.2:+8358962 MS.gene031108:CDS
TATTCGACAATGACAACAAC+TGG 0.390230 6.2:+8359056 MS.gene031108:CDS
CAAACCATGGCAACATCAAT+TGG 0.391833 6.2:+8359020 MS.gene031108:CDS
TGTACGACAATGACAACAAC+TGG 0.401271 6.2:+8359092 MS.gene031108:CDS
TTATCAATGTCTGAAAACTT+TGG 0.411274 6.2:-8358790 None:intergenic
TTCTCTTTGTCACAGCTTCA+AGG 0.412376 6.2:+8358273 MS.gene031108:intron
ATAAATTTCAGGGGTGGCAT+TGG 0.428533 6.2:+8358721 MS.gene031108:intron
AGATAAGAAGTTTCGAAAGT+TGG 0.433823 6.2:+8358458 MS.gene031108:CDS
AATGGTGGTTATATTGAGAA+AGG 0.438771 6.2:+8356394 MS.gene031108:CDS
TGTGTTCAGGGTAGGATGAT+AGG 0.440581 6.2:-8358371 None:intergenic
TGGAACTTCTCTTACACCTA+TGG 0.468996 6.2:+8358741 MS.gene031108:CDS
AAAAGAAATTTCGAAAAGCT+TGG 0.469278 6.2:+8358348 MS.gene031108:CDS
GTGGAGTGAAATTGCTGTCC+AGG 0.469887 6.2:+8356645 MS.gene031108:CDS
TCTGGGACATCACATAAGAT+TGG 0.471115 6.2:-8358438 None:intergenic
ATCTGATATTGAGTCTCATC+AGG 0.477963 6.2:-8358838 None:intergenic
TAAATTTGGTTGATGAAAGA+GGG 0.482774 6.2:+8358963 MS.gene031108:CDS
ACTTTCGAAACTTCTTATCT+GGG 0.485491 6.2:-8358455 None:intergenic
GTCTCTGAGTTACGTACTGT+TGG 0.486991 6.2:+8356616 MS.gene031108:CDS
GACAGCAATTTCACTCCACT+TGG 0.491446 6.2:-8356641 None:intergenic
ATGGTGGTTATATTGAGAAA+GGG 0.513038 6.2:+8356395 MS.gene031108:CDS
TTCTCTTACACCTATGGCTA+TGG 0.513185 6.2:+8358747 MS.gene031108:CDS
ATCAACCAAATTTATCTGAG+AGG 0.520289 6.2:-8358954 None:intergenic
CAAACCAATTGATGTTGCCA+TGG 0.524164 6.2:-8359024 None:intergenic
GTAAAAGTTGTCGTTTGAGA+TGG 0.524704 6.2:+8356533 MS.gene031108:CDS
AATGAAGGGCTTAGTAGAGA+TGG 0.533852 6.2:+8356511 MS.gene031108:CDS
GCCATCAAGAACCATTGGTA+TGG 0.536170 6.2:+8358309 MS.gene031108:CDS
ATAATCTACTCACAGATCAA+TGG 0.548908 6.2:-8358550 None:intergenic
ATAAGATTGGAAGTTGTTCA+CGG 0.552985 6.2:-8358425 None:intergenic
TCAACCAAATTTATCTGAGA+GGG 0.554695 6.2:-8358953 None:intergenic
ATCATGCCATCAAGAACCAT+TGG 0.560892 6.2:+8358304 MS.gene031108:CDS
GGGAAGAAACCAAATTCTCT+CGG 0.562266 6.2:+8358983 MS.gene031108:CDS
CAATGTCTGAAAACTTTGGG+AGG 0.576338 6.2:-8358786 None:intergenic
AAATATGTTGTACAATGATG+TGG 0.584256 6.2:+8358491 MS.gene031108:CDS
TTAATACACGAGAGTGGTGA+AGG 0.584500 6.2:+8358908 MS.gene031108:CDS
AGATCTGATACCATAGCCAT+AGG 0.586469 6.2:-8358757 None:intergenic
AGGTCCATGGTCAAAAGAAG+AGG 0.588105 6.2:+8356426 MS.gene031108:CDS
AATGTCTGAAAACTTTGGGA+GGG 0.592390 6.2:-8358785 None:intergenic
TATTGAGTCTCATCAGGTGG+TGG 0.597976 6.2:-8358832 None:intergenic
TCTGAAAACTTTGGGAGGGA+AGG 0.598386 6.2:-8358781 None:intergenic
GACAACAACTGGTTTGAGTG+CGG 0.614662 6.2:+8359067 MS.gene031108:CDS
AACATCAATTGGTTTGACTG+CGG 0.625065 6.2:+8359031 MS.gene031108:CDS
AATATGTTGTACAATGATGT+GGG 0.649540 6.2:+8358492 MS.gene031108:CDS
TACGTACTGTTGGATCCAAG+TGG 0.661464 6.2:+8356626 MS.gene031108:CDS
TGATATTGAGTCTCATCAGG+TGG 0.669329 6.2:-8358835 None:intergenic
AATGATGTTGAAGCAAACCA+TGG 0.675259 6.2:+8359007 MS.gene031108:CDS
CCATATTTAATACACGAGAG+TGG 0.721859 6.2:+8358902 MS.gene031108:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATAAAATATA+TGG + chr6.2:8357471-8357490 MS.gene031108:intron 0.0%
!! AATTTAACATTATTAATAAC+AGG - chr6.2:8358688-8358707 None:intergenic 10.0%
!! ATTTAACATTATTAATAACA+GGG - chr6.2:8358687-8358706 None:intergenic 10.0%
!! TACGTTAAAAAATAATAATT+TGG + chr6.2:8357009-8357028 MS.gene031108:intron 10.0%
!! TTGTTTATATATATAATATG+AGG + chr6.2:8358616-8358635 MS.gene031108:intron 10.0%
!!! AATAAATAAAATCCAATTTT+TGG + chr6.2:8357153-8357172 MS.gene031108:intron 10.0%
!! GTAATCAAATATTAAATGAA+TGG + chr6.2:8357499-8357518 MS.gene031108:intron 15.0%
!! TCTTAAAAATAACATATTGA+TGG + chr6.2:8357874-8357893 MS.gene031108:intron 15.0%
!!! CTTTATAATTGTTTTTTATG+TGG - chr6.2:8357615-8357634 None:intergenic 15.0%
!! AAAAACTATGATGTTATAGT+TGG + chr6.2:8357910-8357929 MS.gene031108:intron 20.0%
!! AAAAATAACATATTGATGGA+AGG + chr6.2:8357878-8357897 MS.gene031108:intron 20.0%
!! AATTCAGTATCAAAAAATGA+AGG + chr6.2:8356496-8356515 MS.gene031108:CDS 20.0%
!! ATTCAGTATCAAAAAATGAA+GGG + chr6.2:8356497-8356516 MS.gene031108:CDS 20.0%
!! TGTTACATTCATAAATTTCA+GGG + chr6.2:8358711-8358730 MS.gene031108:intron 20.0%
!! TTATAATATTAGGCACATTA+GGG + chr6.2:8357766-8357785 MS.gene031108:intron 20.0%
!! TTGTTACATTCATAAATTTC+AGG + chr6.2:8358710-8358729 MS.gene031108:intron 20.0%
!! TTTATGTAAAGATAAATACC+TGG - chr6.2:8356666-8356685 None:intergenic 20.0%
!!! ATATAAGAAAGTACATAAAG+TGG - chr6.2:8357383-8357402 None:intergenic 20.0%
!!! CAATTTTTTTCAAAAATGAG+TGG - chr6.2:8356915-8356934 None:intergenic 20.0%
!!! CACTCATTTTTGAAAAAAAT+TGG + chr6.2:8356913-8356932 MS.gene031108:intron 20.0%
!!! GTGTATGAAATAAATGTTTT+TGG - chr6.2:8358008-8358027 None:intergenic 20.0%
! AAAAGAAATTTCGAAAAGCT+TGG + chr6.2:8358348-8358367 MS.gene031108:CDS 25.0%
! AAATATGTTGTACAATGATG+TGG + chr6.2:8358491-8358510 MS.gene031108:CDS 25.0%
! AAGATGCAATATAAGAAAGT+CGG - chr6.2:8356956-8356975 None:intergenic 25.0%
! AATATGTTGTACAATGATGT+GGG + chr6.2:8358492-8358511 MS.gene031108:CDS 25.0%
! AATGTGCCTAATATTATAAG+TGG - chr6.2:8357765-8357784 None:intergenic 25.0%
! ATAACGCCACTTATAATATT+AGG + chr6.2:8357756-8357775 MS.gene031108:intron 25.0%
! ATAGCATATGTGACAAAAAA+TGG + chr6.2:8356460-8356479 MS.gene031108:CDS 25.0%
! CTTATAATATTAGGCACATT+AGG + chr6.2:8357765-8357784 MS.gene031108:intron 25.0%
! GATCTCAAGTAATCAAAAAA+TGG + chr6.2:8356813-8356832 MS.gene031108:intron 25.0%
! GTTACATTCATAAATTTCAG+GGG + chr6.2:8358712-8358731 MS.gene031108:intron 25.0%
! TATCAATGTCTGAAAACTTT+GGG - chr6.2:8358792-8358811 None:intergenic 25.0%
! TGCAATGAAACATTATTGTA+TGG - chr6.2:8358880-8358899 None:intergenic 25.0%
! TTAGTGAGAGATTAATTACA+TGG + chr6.2:8358649-8358668 MS.gene031108:intron 25.0%
! TTATCAATGTCTGAAAACTT+TGG - chr6.2:8358793-8358812 None:intergenic 25.0%
!! TTCCAAAATCAACGATATTT+TGG + chr6.2:8357184-8357203 MS.gene031108:intron 25.0%
!!! ATAAATTTGGTTGATGAAAG+AGG + chr6.2:8358962-8358981 MS.gene031108:CDS 25.0%
!!! TAAATTTGGTTGATGAAAGA+GGG + chr6.2:8358963-8358982 MS.gene031108:CDS 25.0%
AAAGAAAAATGCAACAATGG+TGG + chr6.2:8356379-8356398 MS.gene031108:CDS 30.0%
AACTTTCGAAACTTCTTATC+TGG - chr6.2:8358459-8358478 None:intergenic 30.0%
AATGGTGGTTATATTGAGAA+AGG + chr6.2:8356394-8356413 MS.gene031108:CDS 30.0%
ACAAACAAAGTATACACAAG+TGG - chr6.2:8358107-8358126 None:intergenic 30.0%
ACTTTCGAAACTTCTTATCT+GGG - chr6.2:8358458-8358477 None:intergenic 30.0%
AGAGAAAAGAGAAGAGATAT+AGG - chr6.2:8357242-8357261 None:intergenic 30.0%
AGATAAGAAGTTTCGAAAGT+TGG + chr6.2:8358458-8358477 MS.gene031108:CDS 30.0%
AGTACATAAAGTGGACATTT+AGG - chr6.2:8357374-8357393 None:intergenic 30.0%
ATAAGATTGGAAGTTGTTCA+CGG - chr6.2:8358428-8358447 None:intergenic 30.0%
ATAATCTACTCACAGATCAA+TGG - chr6.2:8358553-8358572 None:intergenic 30.0%
ATCAACCAAATTTATCTGAG+AGG - chr6.2:8358957-8358976 None:intergenic 30.0%
ATGGTGGTTATATTGAGAAA+GGG + chr6.2:8356395-8356414 MS.gene031108:CDS 30.0%
ATTGAGAAAGGGTTGAAAAA+AGG + chr6.2:8356406-8356425 MS.gene031108:CDS 30.0%
CTAGACAAAGAAGTGAAAAA+GGG + chr6.2:8356565-8356584 MS.gene031108:CDS 30.0%
GAGAAAGAAAAATGCAACAA+TGG + chr6.2:8356376-8356395 MS.gene031108:CDS 30.0%
GAGAATATGAGAAGAGATAA+AGG - chr6.2:8357304-8357323 None:intergenic 30.0%
GGAACCATATTCCAAAAAAT+GGG + chr6.2:8356834-8356853 MS.gene031108:intron 30.0%
TAACAATGTGCTAGACAAAT+CGG - chr6.2:8356762-8356781 None:intergenic 30.0%
TCAACCAAATTTATCTGAGA+GGG - chr6.2:8358956-8358975 None:intergenic 30.0%
TGAATTGTACGAAAAGACAA+TGG - chr6.2:8358582-8358601 None:intergenic 30.0%
TGGAACCATATTCCAAAAAA+TGG + chr6.2:8356833-8356852 MS.gene031108:intron 30.0%
TTCAAAAATGAGTGGAAGAT+GGG - chr6.2:8356907-8356926 None:intergenic 30.0%
TTTCAAAAATGAGTGGAAGA+TGG - chr6.2:8356908-8356927 None:intergenic 30.0%
! CATCATGTTTTATGTGTTCA+GGG - chr6.2:8358386-8358405 None:intergenic 30.0%
! TCATCATGTTTTATGTGTTC+AGG - chr6.2:8358387-8358406 None:intergenic 30.0%
! TTGTTACTGGAGTTTTTGTT+AGG - chr6.2:8356719-8356738 None:intergenic 30.0%
!!! CACCAAAATATCGTTGATTT+TGG - chr6.2:8357189-8357208 None:intergenic 30.0%
!!! GAAACCCATTTTTTGGAATA+TGG - chr6.2:8356841-8356860 None:intergenic 30.0%
!!! TGATTCAGAAACCCATTTTT+TGG - chr6.2:8356848-8356867 None:intergenic 30.0%
AATGATGTTGAAGCAAACCA+TGG + chr6.2:8359007-8359026 MS.gene031108:CDS 35.0%
ACATCATTTCCGAGAGAATT+TGG - chr6.2:8358995-8359014 None:intergenic 35.0%
ACATTCATAAATTTCAGGGG+TGG + chr6.2:8358715-8358734 MS.gene031108:intron 35.0%
ATCTGATATTGAGTCTCATC+AGG - chr6.2:8358841-8358860 None:intergenic 35.0%
CAAAAAATGGAGCGAGAAAT+TGG + chr6.2:8356473-8356492 MS.gene031108:CDS 35.0%
CCACTCTCGTGTATTAAATA+TGG - chr6.2:8358905-8358924 None:intergenic 35.0%
CCATATTTAATACACGAGAG+TGG + chr6.2:8358902-8358921 MS.gene031108:CDS 35.0%
CCTAGACAAAGAAGTGAAAA+AGG + chr6.2:8356564-8356583 MS.gene031108:CDS 35.0%
CTTGCTTCTTCTTCATTGAA+TGG - chr6.2:8356592-8356611 None:intergenic 35.0%
GGCTATGTTTGATTGTAAAG+AGG - chr6.2:8357353-8357372 None:intergenic 35.0%
TATTCGACAATGACAACAAC+TGG + chr6.2:8359056-8359075 MS.gene031108:CDS 35.0%
TTATAGAGAGACGTTGTTAC+TGG - chr6.2:8356732-8356751 None:intergenic 35.0%
! AATGTCTGAAAACTTTGGGA+GGG - chr6.2:8358788-8358807 None:intergenic 35.0%
! AATTTTGAACCTCCTCAATC+AGG + chr6.2:8357727-8357746 MS.gene031108:intron 35.0%
! ATGTTTTATGTGTTCAGGGT+AGG - chr6.2:8358382-8358401 None:intergenic 35.0%
! ATTTTGAACCTCCTCAATCA+GGG + chr6.2:8357728-8357747 MS.gene031108:intron 35.0%
! GTAAAAGTTGTCGTTTGAGA+TGG + chr6.2:8356533-8356552 MS.gene031108:CDS 35.0%
! TTCTCTCTTTTCCATACCAA+TGG - chr6.2:8358323-8358342 None:intergenic 35.0%
!! AACATCAATTGGTTTGACTG+CGG + chr6.2:8359031-8359050 MS.gene031108:CDS 35.0%
!! ACTCACAGATCAATGGATTT+TGG - chr6.2:8358546-8358565 None:intergenic 35.0%
!! AGTGTTTTGGATAGAGACAA+TGG - chr6.2:8356789-8356808 None:intergenic 35.0%
!! CCTTTTTCACTTCTTTGTCT+AGG - chr6.2:8356567-8356586 None:intergenic 35.0%
!! CTCACAGATCAATGGATTTT+GGG - chr6.2:8358545-8358564 None:intergenic 35.0%
!! GACAACAACTGGTTTGATTA+CGG + chr6.2:8359103-8359122 MS.gene031108:CDS 35.0%
!! TCACAGATCAATGGATTTTG+GGG - chr6.2:8358544-8358563 None:intergenic 35.0%
!!! AGCCATTTTTAATGTTAGCG+CGG + chr6.2:8358205-8358224 MS.gene031108:intron 35.0%
!!! TCGTTGATTTTGGAAAGCAT+CGG - chr6.2:8357179-8357198 None:intergenic 35.0%
AAGGGTTGAAAAAAGGTCCA+TGG + chr6.2:8356413-8356432 MS.gene031108:CDS 40.0%
AATGAAGGGCTTAGTAGAGA+TGG + chr6.2:8356511-8356530 MS.gene031108:CDS 40.0%
AATGTGCTAGACAAATCGGA+AGG - chr6.2:8356758-8356777 None:intergenic 40.0%
AGATCTGATACCATAGCCAT+AGG - chr6.2:8358760-8358779 None:intergenic 40.0%
AGCCGCGCTAACATTAAAAA+TGG - chr6.2:8358210-8358229 None:intergenic 40.0%
ATAAATTTCAGGGGTGGCAT+TGG + chr6.2:8358721-8358740 MS.gene031108:intron 40.0%
ATCATGCCATCAAGAACCAT+TGG + chr6.2:8358304-8358323 MS.gene031108:CDS 40.0%
CAAACCAATTGATGTTGCCA+TGG - chr6.2:8359027-8359046 None:intergenic 40.0%
CAAACCATGGCAACATCAAT+TGG + chr6.2:8359020-8359039 MS.gene031108:CDS 40.0%
CAATGTCTGAAAACTTTGGG+AGG - chr6.2:8358789-8358808 None:intergenic 40.0%
GGGAAGAAACCAAATTCTCT+CGG + chr6.2:8358983-8359002 MS.gene031108:CDS 40.0%
GTCTCTATCCAAAACACTTG+TGG + chr6.2:8356791-8356810 MS.gene031108:intron 40.0%
TCCATACCAATGGTTCTTGA+TGG - chr6.2:8358313-8358332 None:intergenic 40.0%
TGATATTGAGTCTCATCAGG+TGG - chr6.2:8358838-8358857 None:intergenic 40.0%
TGGAACTTCTCTTACACCTA+TGG + chr6.2:8358741-8358760 MS.gene031108:CDS 40.0%
TGTACGACAATGACAACAAC+TGG + chr6.2:8359092-8359111 MS.gene031108:CDS 40.0%
TTAATACACGAGAGTGGTGA+AGG + chr6.2:8358908-8358927 MS.gene031108:CDS 40.0%
TTCTCTTACACCTATGGCTA+TGG + chr6.2:8358747-8358766 MS.gene031108:CDS 40.0%
TTCTCTTTGTCACAGCTTCA+AGG + chr6.2:8358273-8358292 MS.gene031108:intron 40.0%
! CTTGAGATCCACAAGTGTTT+TGG - chr6.2:8356802-8356821 None:intergenic 40.0%
! TCATCCTCTTCTTTTGACCA+TGG - chr6.2:8356433-8356452 None:intergenic 40.0%
! TCTGGGACATCACATAAGAT+TGG - chr6.2:8358441-8358460 None:intergenic 40.0%
AGGTCCATGGTCAAAAGAAG+AGG + chr6.2:8356426-8356445 MS.gene031108:CDS 45.0%
CGTTATCATGACCCTGATTG+AGG - chr6.2:8357742-8357761 None:intergenic 45.0%
CTTAGTTGCTAGTTGCTGGT+TGG + chr6.2:8358228-8358247 MS.gene031108:intron 45.0%
GACAGCAATTTCACTCCACT+TGG - chr6.2:8356644-8356663 None:intergenic 45.0%
GCCATCAAGAACCATTGGTA+TGG + chr6.2:8358309-8358328 MS.gene031108:CDS 45.0%
GCGTCCCTCTCAGATAAATT+TGG + chr6.2:8358949-8358968 MS.gene031108:CDS 45.0%
GTCTCTGAGTTACGTACTGT+TGG + chr6.2:8356616-8356635 MS.gene031108:CDS 45.0%
TACGTACTGTTGGATCCAAG+TGG + chr6.2:8356626-8356645 MS.gene031108:CDS 45.0%
TATCATGACCCTGATTGAGG+AGG - chr6.2:8357739-8357758 None:intergenic 45.0%
TATTGAGTCTCATCAGGTGG+TGG - chr6.2:8358835-8358854 None:intergenic 45.0%
TGTGTTCAGGGTAGGATGAT+AGG - chr6.2:8358374-8358393 None:intergenic 45.0%
! CACATTAGGGAGAACTTGCT+TGG + chr6.2:8357779-8357798 MS.gene031108:intron 45.0%
! TCTGAAAACTTTGGGAGGGA+AGG - chr6.2:8358784-8358803 None:intergenic 45.0%
!! GACAACAACTGGTTTGAGTG+CGG + chr6.2:8359067-8359086 MS.gene031108:CDS 45.0%
!! GGAAAGCATCGGCCAAAAAT+TGG - chr6.2:8357168-8357187 None:intergenic 45.0%
!! TTATATTTATATTATCTATA+AGG + chr6.2:8356974-8356993 MS.gene031108:intron 5.0%
GTGCTAGACAAATCGGAAGG+AGG - chr6.2:8356755-8356774 None:intergenic 50.0%
GTGGAGTGAAATTGCTGTCC+AGG + chr6.2:8356645-8356664 MS.gene031108:CDS 50.0%
GCGGCTTAGTTGCTAGTTGC+TGG + chr6.2:8358224-8358243 MS.gene031108:intron 55.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 8356361 8359132 8356361 ID=MS.gene031108
chr6.2 mRNA 8356361 8359132 8356361 ID=MS.gene031108.t1;Parent=MS.gene031108
chr6.2 exon 8356361 8356666 8356361 ID=MS.gene031108.t1.exon1;Parent=MS.gene031108.t1
chr6.2 CDS 8356361 8356666 8356361 ID=cds.MS.gene031108.t1;Parent=MS.gene031108.t1
chr6.2 exon 8358288 8358559 8358288 ID=MS.gene031108.t1.exon2;Parent=MS.gene031108.t1
chr6.2 CDS 8358288 8358559 8358288 ID=cds.MS.gene031108.t1;Parent=MS.gene031108.t1
chr6.2 exon 8358732 8358860 8358732 ID=MS.gene031108.t1.exon3;Parent=MS.gene031108.t1
chr6.2 CDS 8358732 8358860 8358732 ID=cds.MS.gene031108.t1;Parent=MS.gene031108.t1
chr6.2 exon 8358901 8359132 8358901 ID=MS.gene031108.t1.exon4;Parent=MS.gene031108.t1
chr6.2 CDS 8358901 8359132 8358901 ID=cds.MS.gene031108.t1;Parent=MS.gene031108.t1
Gene Sequence

>MS.gene031108

ATGTCTTCATCTAAGGAGAAAGAAAAATGCAACAATGGTGGTTATATTGAGAAAGGGTTGAAAAAAGGTCCATGGTCAAAAGAAGAGGATGAAAAGTTGATAGCATATGTGACAAAAAATGGAGCGAGAAATTGGAATTCAGTATCAAAAAATGAAGGGCTTAGTAGAGATGGTAAAAGTTGTCGTTTGAGATGGATGAATCACCTAGACAAAGAAGTGAAAAAGGGTCCATTCAATGAAGAAGAAGCAAGAATAGTCTCTGAGTTACGTACTGTTGGATCCAAGTGGAGTGAAATTGCTGTCCAGGTATTTATCTTTACATAAATATTTTTTTTTAAGAATTCATGTGCAATAACCTAACAAAAACTCCAGTAACAACGTCTCTCTATAACCTCCTTCCGATTTGTCTAGCACATTGTTATCTTCCATTGTCTCTATCCAAAACACTTGTGGATCTCAAGTAATCAAAAAATGGAACCATATTCCAAAAAATGGGTTTCTGAATCATCTTCATCTCAAGCTATATCATCTTTTCACATCTGTCCCATCTTCCACTCATTTTTGAAAAAAATTGGAGATGTCAACTAATTAGCCGACTTTCTTATATTGCATCTTATATTTATATTATCTATAAGGCAATATATATGTTACGTTAAAAAATAATAATTTGGCAGATGCTTTAAATCAAATCAAAATAAATAATTCAAATAATCTATTTACTTTAAATACTACTACTATTTTCATTTGTCAAAATTAAAAATCAGTAATTATTTGAATTAATATTAACAAATTAATAAATAAAATCCAATTTTTGGCCGATGCTTTCCAAAATCAACGATATTTTGGTGCTTTCATAACTATCAGCATTTTTTTTCTCTCCTATATCTCTTCTCTTTTCTCTTATAACAAACAATACTCTAAATCTACTCTATTTCTCACACCTTTATCTCTTCTCATATTCTCTCTCACATATTTCTCTCTTCACAATTCCTCTTTACAATCAAACATAGCCTAAATGTCCACTTTATGTACTTTCTTATATATTAAATGATTATTCAATTATTCTTAGCATATATATATATATATATATATATATATATATATATATATATATATATATATAAAATATATGGAATGTGTAATCAAATATTAAATGAATGGATAGACAATTGTCTCATGACTTATATCGAAAGAGATGTATTTAACAAATTTAATCATAAATTTATTATTCAACGATTTCAAAATATAAAACCACATAAAAAACAATTATAAAGTATGTATTTGTTTGAGTATGTTGCAATTTTTTAATATATATATATATATATATATATATATATATATATATATATATATATTAAAGTTAAAAAATTTTGAACCTCCTCAATCAGGGTCATGATAACGCCACTTATAATATTAGGCACATTAGGGAGAACTTGCTTGGTTTTGTTCAAAAAATAATTCAATTACTCTTTTAATCAAAAATAAAAATTAAATACTATGACGTTATATTTGATCTTAAAAATAACATATTGATGGAAGGAAAAAAAAAAAAAACTATGATGTTATAGTTGGATTAGTTTATTTTTTGTCAAATCAATAATAATCTCATGCACTTAATTAATTAAAAAGTGTGTTGATTGCTCTCCAAAAACATTTATTTCATACACTCTAGTTTTTGTGTTTTTTTGTTGTACACTCTAGTAGTCTAGTTAGATATTGAACTTTTTGACACACTTGTATTTACCACTTGTGTATACTTTGTTTGTTACATAGATTAGTTTCTATCATTTACATAACTTATTGAAACAAATTTATTAGTTAGCACAATTGTGCTATGAGTTTGAAGCCATTTTTAATGTTAGCGCGGCTTAGTTGCTAGTTGCTGGTTGGAGCTATCATTAATTTTCTTTCGTTCTCTTTGTCACAGCTTCAAGGAAGAACAGATCATGCCATCAAGAACCATTGGTATGGAAAAGAGAGAAAAAGAAAAAGAAATTTCGAAAAGCTTGGCCTATCATCCTACCCTGAACACATAAAACATGATGATGTGTTAAACAAAAACAGCCGTGAACAACTTCCAATCTTATGTGATGTCCCAGATAAGAAGTTTCGAAAGTTGGTTGATGATTCAAATATGTTGTACAATGATGTGGGAAGTACTTCTACGAGCAATCATACTGCCCCAAAATCCATTGATCTGTGAGTAGATTATGCATTGCCATTGTCTTTTCGTACAATTCAAATTATATGTTAAATTGTTTATATATATAATATGAGGTATCAGCTCATTAGTGAGAGATTAATTACATGGTAAAATATCTATCCCTGTTATTAATAATGTTAAATTTATTGTTACATTCATAAATTTCAGGGGTGGCATTGGAACTTCTCTTACACCTATGGCTATGGTATCAGATCTACCTTCCCTCCCAAAGTTTTCAGACATTGATAACGTAGTTTATCAACAAATTCCACCACCTGATGAGACTCAATATCAGATGTTAGAATCAATTTCTCCATACAATAATGTTTCATTGCAGTCCATATTTAATACACGAGAGTGGTGAAGGCTCAGATGCTACTCTCATGCGTCCCTCTCAGATAAATTTGGTTGATGAAAGAGGGAAGAAACCAAATTCTCTCGGAAATGATGTTGAAGCAAACCATGGCAACATCAATTGGTTTGACTGCGGTTTATTCGACAATGACAACAACTGGTTTGAGTGCGGTTTGTACGACAATGACAACAACTGGTTTGATTACGGTAATTAA
Protein sequence

>MS.gene031108.t1

MSSSKEKEKCNNGGYIEKGLKKGPWSKEEDEKLIAYVTKNGARNWNSVSKNEGLSRDGKSCRLRWMNHLDKEVKKGPFNEEEARIVSELRTVGSKWSEIAVQLQGRTDHAIKNHWYGKERKRKRNFEKLGLSSYPEHIKHDDVLNKNSREQLPILCDVPDKKFRKLVDDSNMLYNDVGSTSTSNHTAPKSIDLGGIGTSLTPMAMVSDLPSLPKFSDIDNVVYQQIPPPDETQYQIPYLIHESGEGSDATLMRPSQINLVDERGKKPNSLGNDVEANHGNINWFDCGLFDNDNNWFECGLYDNDNNWFDYGN