Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03111.t1 | XP_013462609.1 | 88.7 | 222 | 17 | 2 | 1 | 220 | 1 | 216 | 1.30E-105 | 392.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03111.t1 | Q93WV5 | 52.4 | 210 | 75 | 6 | 11 | 197 | 41 | 248 | 7.0e-36 | 152.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03111.t1 | A0A072V5L0 | 88.7 | 222 | 17 | 2 | 1 | 220 | 1 | 216 | 9.3e-106 | 392.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene03111.t1 | TF | WRKY |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03111.t1 | MTR_2g016770 | 95.495 | 222 | 2 | 2 | 1 | 220 | 1 | 216 | 2.11e-155 | 429 |
MS.gene03111.t1 | MTR_2g016770 | 95.261 | 211 | 2 | 2 | 12 | 220 | 4 | 208 | 9.85e-148 | 409 |
MS.gene03111.t1 | MTR_8g087000 | 53.769 | 199 | 63 | 7 | 11 | 197 | 46 | 227 | 3.37e-62 | 194 |
MS.gene03111.t1 | MTR_8g087000 | 53.535 | 198 | 63 | 7 | 12 | 197 | 48 | 228 | 1.57e-61 | 192 |
MS.gene03111.t1 | MTR_2g083870 | 51.980 | 202 | 80 | 6 | 7 | 194 | 47 | 245 | 1.58e-59 | 188 |
MS.gene03111.t1 | MTR_8g087000 | 47.651 | 149 | 55 | 6 | 55 | 197 | 35 | 166 | 2.90e-34 | 120 |
MS.gene03111.t1 | MTR_7g079040 | 60.440 | 91 | 30 | 1 | 9 | 99 | 134 | 218 | 3.19e-33 | 122 |
MS.gene03111.t1 | MTR_2g032030 | 50.769 | 130 | 48 | 3 | 11 | 124 | 239 | 368 | 8.18e-33 | 122 |
MS.gene03111.t1 | MTR_8g028565 | 50.000 | 126 | 49 | 3 | 4 | 121 | 129 | 248 | 1.13e-32 | 120 |
MS.gene03111.t1 | MTR_2g032030 | 50.769 | 130 | 48 | 3 | 11 | 124 | 239 | 368 | 1.68e-32 | 122 |
MS.gene03111.t1 | MTR_7g109600 | 52.252 | 111 | 48 | 3 | 9 | 116 | 24 | 132 | 7.17e-32 | 117 |
MS.gene03111.t1 | MTR_8g098945 | 76.562 | 64 | 15 | 0 | 36 | 99 | 130 | 193 | 1.91e-31 | 116 |
MS.gene03111.t1 | MTR_5g016610 | 54.945 | 91 | 40 | 1 | 4 | 94 | 169 | 258 | 1.73e-28 | 108 |
MS.gene03111.t1 | MTR_1g009613 | 54.762 | 84 | 37 | 1 | 11 | 94 | 239 | 321 | 1.15e-27 | 107 |
MS.gene03111.t1 | MTR_1g099600 | 72.308 | 65 | 18 | 0 | 35 | 99 | 185 | 249 | 1.24e-27 | 107 |
MS.gene03111.t1 | MTR_4g094908 | 55.172 | 87 | 37 | 2 | 9 | 94 | 240 | 325 | 2.89e-27 | 106 |
MS.gene03111.t1 | MTR_4g127040 | 56.471 | 85 | 36 | 1 | 9 | 93 | 220 | 303 | 3.66e-27 | 105 |
MS.gene03111.t1 | MTR_1g070455 | 55.294 | 85 | 37 | 1 | 12 | 96 | 271 | 354 | 3.82e-26 | 103 |
MS.gene03111.t1 | MTR_3g108960 | 51.163 | 86 | 41 | 1 | 11 | 96 | 291 | 375 | 5.41e-24 | 98.6 |
MS.gene03111.t1 | MTR_0117s0040 | 64.407 | 59 | 21 | 0 | 34 | 92 | 73 | 131 | 1.88e-23 | 94.7 |
MS.gene03111.t1 | MTR_2g024350 | 59.677 | 62 | 25 | 0 | 34 | 95 | 7 | 68 | 3.54e-22 | 90.9 |
MS.gene03111.t1 | MTR_2g024380 | 59.677 | 62 | 25 | 0 | 34 | 95 | 250 | 311 | 4.02e-21 | 91.3 |
MS.gene03111.t1 | MTR_3g053330 | 58.065 | 62 | 26 | 0 | 35 | 96 | 251 | 312 | 3.47e-19 | 85.5 |
MS.gene03111.t1 | MTR_7g011820 | 42.017 | 119 | 50 | 4 | 11 | 116 | 375 | 487 | 7.83e-19 | 84.7 |
MS.gene03111.t1 | MTR_7g011820 | 43.182 | 88 | 47 | 3 | 31 | 118 | 224 | 308 | 1.78e-14 | 72.0 |
MS.gene03111.t1 | MTR_7g110720 | 56.452 | 62 | 27 | 0 | 35 | 96 | 216 | 277 | 9.26e-19 | 84.3 |
MS.gene03111.t1 | MTR_4g094588 | 56.667 | 60 | 25 | 1 | 36 | 95 | 179 | 237 | 1.04e-18 | 83.2 |
MS.gene03111.t1 | MTR_7g110720 | 56.452 | 62 | 27 | 0 | 35 | 96 | 189 | 250 | 1.08e-18 | 84.0 |
MS.gene03111.t1 | MTR_5g091390 | 55.000 | 60 | 26 | 1 | 36 | 95 | 158 | 216 | 1.29e-18 | 82.8 |
MS.gene03111.t1 | MTR_2g023930 | 56.452 | 62 | 27 | 0 | 35 | 96 | 305 | 366 | 1.45e-18 | 84.0 |
MS.gene03111.t1 | MTR_2g045360 | 55.738 | 61 | 27 | 0 | 36 | 96 | 212 | 272 | 1.75e-18 | 83.6 |
MS.gene03111.t1 | MTR_8g067635 | 43.137 | 102 | 52 | 2 | 6 | 103 | 316 | 415 | 3.79e-18 | 82.8 |
MS.gene03111.t1 | MTR_8g069935 | 53.968 | 63 | 29 | 0 | 33 | 95 | 329 | 391 | 4.37e-18 | 82.4 |
MS.gene03111.t1 | MTR_7g100510 | 53.846 | 78 | 30 | 3 | 36 | 113 | 362 | 433 | 5.50e-18 | 82.0 |
MS.gene03111.t1 | MTR_7g100510 | 49.206 | 63 | 30 | 2 | 33 | 95 | 187 | 247 | 2.68e-14 | 71.2 |
MS.gene03111.t1 | MTR_3g009470 | 38.596 | 114 | 65 | 4 | 32 | 142 | 277 | 388 | 6.00e-18 | 82.4 |
MS.gene03111.t1 | MTR_3g009470 | 41.053 | 95 | 46 | 3 | 36 | 121 | 496 | 589 | 1.32e-14 | 72.4 |
MS.gene03111.t1 | MTR_3g009470 | 38.596 | 114 | 65 | 4 | 32 | 142 | 277 | 388 | 7.02e-18 | 82.0 |
MS.gene03111.t1 | MTR_2g088000 | 54.839 | 62 | 28 | 0 | 35 | 96 | 349 | 410 | 7.40e-18 | 82.0 |
MS.gene03111.t1 | MTR_5g042920 | 47.500 | 80 | 40 | 2 | 36 | 114 | 321 | 399 | 9.96e-18 | 81.3 |
MS.gene03111.t1 | MTR_5g042920 | 32.520 | 123 | 80 | 3 | 33 | 155 | 149 | 268 | 2.40e-15 | 74.3 |
MS.gene03111.t1 | MTR_5g043880 | 54.688 | 64 | 27 | 2 | 36 | 98 | 125 | 187 | 1.01e-17 | 79.7 |
MS.gene03111.t1 | MTR_4g082580 | 47.561 | 82 | 40 | 2 | 36 | 115 | 279 | 359 | 1.07e-17 | 80.9 |
MS.gene03111.t1 | MTR_4g082580 | 35.246 | 122 | 68 | 3 | 7 | 126 | 125 | 237 | 1.36e-12 | 66.2 |
MS.gene03111.t1 | MTR_4g132430 | 51.613 | 62 | 30 | 0 | 35 | 96 | 127 | 188 | 7.34e-17 | 78.6 |
MS.gene03111.t1 | MTR_4g132430 | 51.613 | 62 | 30 | 0 | 35 | 96 | 261 | 322 | 8.74e-17 | 78.6 |
MS.gene03111.t1 | MTR_4g107970 | 52.459 | 61 | 29 | 0 | 35 | 95 | 255 | 315 | 8.76e-17 | 79.0 |
MS.gene03111.t1 | MTR_4g107970 | 52.459 | 61 | 29 | 0 | 35 | 95 | 178 | 238 | 8.98e-17 | 78.6 |
MS.gene03111.t1 | MTR_5g067680 | 42.169 | 83 | 46 | 1 | 10 | 90 | 177 | 259 | 1.01e-16 | 78.2 |
MS.gene03111.t1 | MTR_4g049760 | 52.459 | 61 | 29 | 0 | 35 | 95 | 290 | 350 | 1.17e-16 | 78.6 |
MS.gene03111.t1 | MTR_5g094430 | 50.794 | 63 | 30 | 1 | 36 | 98 | 231 | 292 | 1.18e-16 | 78.2 |
MS.gene03111.t1 | MTR_5g094430 | 31.944 | 144 | 95 | 3 | 35 | 178 | 66 | 206 | 2.35e-14 | 71.6 |
MS.gene03111.t1 | MTR_5g094430 | 50.794 | 63 | 30 | 1 | 36 | 98 | 253 | 314 | 1.18e-16 | 78.2 |
MS.gene03111.t1 | MTR_5g094430 | 31.944 | 144 | 95 | 3 | 35 | 178 | 88 | 228 | 2.44e-14 | 71.6 |
MS.gene03111.t1 | MTR_4g049790 | 50.000 | 64 | 32 | 0 | 32 | 95 | 309 | 372 | 1.23e-16 | 78.6 |
MS.gene03111.t1 | MTR_5g094430 | 50.794 | 63 | 30 | 1 | 36 | 98 | 365 | 426 | 1.48e-16 | 78.2 |
MS.gene03111.t1 | MTR_5g094430 | 32.168 | 143 | 94 | 3 | 36 | 178 | 201 | 340 | 2.88e-14 | 71.6 |
MS.gene03111.t1 | MTR_3g056100 | 50.000 | 64 | 31 | 1 | 36 | 99 | 259 | 321 | 2.08e-16 | 77.4 |
MS.gene03111.t1 | MTR_8g067650 | 52.941 | 68 | 30 | 1 | 36 | 103 | 340 | 405 | 2.09e-16 | 77.8 |
MS.gene03111.t1 | MTR_3g056100 | 50.000 | 64 | 31 | 1 | 36 | 99 | 272 | 334 | 2.10e-16 | 77.4 |
MS.gene03111.t1 | MTR_3g056100 | 34.579 | 107 | 66 | 4 | 36 | 142 | 100 | 202 | 8.45e-11 | 61.2 |
MS.gene03111.t1 | MTR_1g086790 | 48.333 | 60 | 30 | 1 | 36 | 95 | 159 | 217 | 2.39e-16 | 76.6 |
MS.gene03111.t1 | MTR_3g056100 | 50.000 | 64 | 31 | 1 | 36 | 99 | 403 | 465 | 2.47e-16 | 77.4 |
MS.gene03111.t1 | MTR_3g056100 | 50.000 | 64 | 31 | 1 | 36 | 99 | 416 | 478 | 2.59e-16 | 77.4 |
MS.gene03111.t1 | MTR_4g094412 | 52.459 | 61 | 29 | 0 | 35 | 95 | 234 | 294 | 3.98e-16 | 76.6 |
MS.gene03111.t1 | MTR_4g094412 | 52.459 | 61 | 29 | 0 | 35 | 95 | 243 | 303 | 4.03e-16 | 76.6 |
MS.gene03111.t1 | MTR_1g013760 | 49.123 | 57 | 29 | 0 | 36 | 92 | 141 | 197 | 4.08e-16 | 75.5 |
MS.gene03111.t1 | MTR_3g031220 | 43.158 | 95 | 51 | 2 | 14 | 106 | 342 | 435 | 7.11e-16 | 76.3 |
MS.gene03111.t1 | MTR_3g031220 | 40.909 | 110 | 59 | 5 | 36 | 143 | 199 | 304 | 2.77e-13 | 68.6 |
MS.gene03111.t1 | MTR_5g074400 | 52.381 | 63 | 29 | 1 | 36 | 98 | 421 | 482 | 8.50e-16 | 75.9 |
MS.gene03111.t1 | MTR_5g074400 | 48.333 | 60 | 29 | 2 | 36 | 95 | 244 | 301 | 2.11e-11 | 63.2 |
MS.gene03111.t1 | MTR_7g109800 | 51.667 | 60 | 28 | 1 | 36 | 95 | 146 | 204 | 1.11e-15 | 74.3 |
MS.gene03111.t1 | MTR_4g122530 | 48.333 | 60 | 30 | 1 | 36 | 95 | 209 | 267 | 1.79e-15 | 74.7 |
MS.gene03111.t1 | MTR_7g062220 | 40.000 | 105 | 56 | 3 | 36 | 134 | 125 | 228 | 1.82e-15 | 73.9 |
MS.gene03111.t1 | MTR_7g009730 | 53.448 | 58 | 27 | 0 | 35 | 92 | 219 | 276 | 1.94e-15 | 74.7 |
MS.gene03111.t1 | MTR_6g053200 | 46.970 | 66 | 35 | 0 | 30 | 95 | 325 | 390 | 2.21e-15 | 74.7 |
MS.gene03111.t1 | MTR_7g080000 | 55.000 | 60 | 25 | 2 | 36 | 95 | 235 | 292 | 3.21e-15 | 74.3 |
MS.gene03111.t1 | MTR_7g080000 | 50.794 | 63 | 30 | 1 | 36 | 98 | 433 | 494 | 3.00e-14 | 71.6 |
MS.gene03111.t1 | MTR_1g013790 | 46.667 | 60 | 32 | 0 | 36 | 95 | 102 | 161 | 3.60e-15 | 72.4 |
MS.gene03111.t1 | MTR_3g106060 | 43.056 | 72 | 41 | 0 | 36 | 107 | 139 | 210 | 3.87e-15 | 72.8 |
MS.gene03111.t1 | MTR_7g080020 | 48.052 | 77 | 34 | 2 | 36 | 112 | 494 | 564 | 4.24e-15 | 73.9 |
MS.gene03111.t1 | MTR_7g080020 | 48.611 | 72 | 34 | 3 | 24 | 95 | 270 | 338 | 1.27e-14 | 72.8 |
MS.gene03111.t1 | MTR_4g007060 | 42.857 | 70 | 40 | 0 | 27 | 96 | 120 | 189 | 5.27e-15 | 72.4 |
MS.gene03111.t1 | MTR_6g086555 | 51.613 | 62 | 28 | 2 | 35 | 95 | 206 | 266 | 5.36e-15 | 73.2 |
MS.gene03111.t1 | MTR_4g007060 | 42.857 | 70 | 40 | 0 | 27 | 96 | 154 | 223 | 5.90e-15 | 72.8 |
MS.gene03111.t1 | MTR_7g117200 | 46.479 | 71 | 32 | 2 | 36 | 100 | 119 | 189 | 2.05e-14 | 71.2 |
MS.gene03111.t1 | MTR_2g033820 | 46.667 | 60 | 31 | 1 | 36 | 95 | 204 | 262 | 4.29e-14 | 70.5 |
MS.gene03111.t1 | MTR_2g105060 | 45.000 | 60 | 33 | 0 | 36 | 95 | 95 | 154 | 4.35e-14 | 69.3 |
MS.gene03111.t1 | MTR_2g105060 | 45.000 | 60 | 33 | 0 | 36 | 95 | 170 | 229 | 5.18e-14 | 70.1 |
MS.gene03111.t1 | MTR_4g130900 | 47.619 | 63 | 32 | 1 | 36 | 98 | 360 | 421 | 5.65e-14 | 70.5 |
MS.gene03111.t1 | MTR_8g027860 | 30.827 | 133 | 83 | 3 | 9 | 134 | 110 | 240 | 6.60e-14 | 70.1 |
MS.gene03111.t1 | MTR_3g090860 | 50.000 | 60 | 28 | 1 | 33 | 90 | 131 | 190 | 6.99e-14 | 69.7 |
MS.gene03111.t1 | MTR_3g095040 | 48.333 | 60 | 30 | 1 | 36 | 95 | 119 | 177 | 8.10e-14 | 67.8 |
MS.gene03111.t1 | MTR_8g099350 | 31.724 | 145 | 86 | 4 | 9 | 146 | 106 | 244 | 1.06e-13 | 69.3 |
MS.gene03111.t1 | MTR_4g013260 | 49.206 | 63 | 31 | 1 | 36 | 98 | 337 | 398 | 1.25e-13 | 69.7 |
MS.gene03111.t1 | MTR_7g079010 | 49.123 | 57 | 28 | 1 | 36 | 92 | 142 | 197 | 1.26e-13 | 67.8 |
MS.gene03111.t1 | MTR_1g078260 | 55.932 | 59 | 24 | 2 | 36 | 93 | 248 | 305 | 1.40e-13 | 69.3 |
MS.gene03111.t1 | MTR_5g097490 | 50.000 | 60 | 29 | 1 | 36 | 95 | 253 | 311 | 1.41e-13 | 69.3 |
MS.gene03111.t1 | MTR_5g097490 | 48.333 | 60 | 29 | 2 | 36 | 95 | 93 | 150 | 7.52e-11 | 61.2 |
MS.gene03111.t1 | MTR_5g067700 | 35.433 | 127 | 69 | 5 | 36 | 152 | 107 | 230 | 2.08e-13 | 67.4 |
MS.gene03111.t1 | MTR_3g031220 | 40.909 | 110 | 59 | 5 | 36 | 143 | 199 | 304 | 2.64e-13 | 68.6 |
MS.gene03111.t1 | MTR_7g109600 | 50.000 | 62 | 29 | 1 | 55 | 116 | 7 | 66 | 3.06e-13 | 66.2 |
MS.gene03111.t1 | MTR_1g015140 | 49.123 | 57 | 28 | 1 | 36 | 92 | 103 | 158 | 3.19e-13 | 65.5 |
MS.gene03111.t1 | MTR_7g071120 | 47.619 | 63 | 32 | 1 | 36 | 98 | 325 | 386 | 3.78e-13 | 68.2 |
MS.gene03111.t1 | MTR_7g071120 | 44.928 | 69 | 34 | 3 | 36 | 104 | 167 | 231 | 6.01e-12 | 64.7 |
MS.gene03111.t1 | MTR_3g104750 | 49.123 | 57 | 28 | 1 | 36 | 92 | 105 | 160 | 3.91e-13 | 65.1 |
MS.gene03111.t1 | MTR_8g092140 | 46.552 | 58 | 30 | 1 | 36 | 93 | 161 | 217 | 1.53e-12 | 65.1 |
MS.gene03111.t1 | MTR_1g077780 | 46.667 | 60 | 31 | 1 | 36 | 95 | 63 | 121 | 1.55e-12 | 63.2 |
MS.gene03111.t1 | MTR_3g095080 | 46.552 | 58 | 30 | 1 | 36 | 93 | 169 | 225 | 2.02e-12 | 64.7 |
MS.gene03111.t1 | MTR_3g095080 | 46.552 | 58 | 30 | 1 | 36 | 93 | 145 | 201 | 2.03e-12 | 64.3 |
MS.gene03111.t1 | MTR_4g047580 | 45.312 | 64 | 35 | 0 | 32 | 95 | 278 | 341 | 2.18e-12 | 65.9 |
MS.gene03111.t1 | MTR_8g007270 | 48.276 | 58 | 29 | 1 | 36 | 93 | 155 | 211 | 2.36e-12 | 64.3 |
MS.gene03111.t1 | MTR_8g092010 | 45.000 | 60 | 32 | 1 | 36 | 95 | 109 | 167 | 2.65e-12 | 63.5 |
MS.gene03111.t1 | MTR_7g028415 | 44.068 | 59 | 32 | 1 | 36 | 94 | 94 | 151 | 6.61e-12 | 62.0 |
MS.gene03111.t1 | MTR_7g028710 | 44.068 | 59 | 32 | 1 | 36 | 94 | 94 | 151 | 6.61e-12 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03111.t1 | AT1G29280 | 48.214 | 224 | 94 | 7 | 4 | 208 | 38 | 258 | 2.50e-57 | 182 |
MS.gene03111.t1 | AT3G58710 | 45.714 | 210 | 89 | 6 | 11 | 197 | 41 | 248 | 6.59e-49 | 161 |
MS.gene03111.t1 | AT3G58710 | 45.455 | 209 | 89 | 6 | 12 | 197 | 43 | 249 | 2.50e-48 | 160 |
MS.gene03111.t1 | AT2G34830 | 36.709 | 237 | 101 | 5 | 6 | 203 | 185 | 411 | 4.29e-33 | 124 |
MS.gene03111.t1 | AT2G34830 | 36.709 | 237 | 101 | 5 | 6 | 203 | 176 | 402 | 4.63e-33 | 123 |
MS.gene03111.t1 | AT4G01250 | 44.000 | 150 | 69 | 3 | 7 | 155 | 105 | 240 | 3.14e-32 | 119 |
MS.gene03111.t1 | AT1G30650 | 61.290 | 93 | 32 | 1 | 11 | 99 | 189 | 281 | 3.25e-31 | 118 |
MS.gene03111.t1 | AT4G23550 | 49.612 | 129 | 54 | 4 | 16 | 143 | 126 | 244 | 1.56e-30 | 114 |
MS.gene03111.t1 | AT5G52830 | 49.153 | 118 | 50 | 3 | 9 | 125 | 144 | 252 | 6.06e-30 | 114 |
MS.gene03111.t1 | AT2G23320 | 53.488 | 86 | 39 | 1 | 9 | 94 | 215 | 299 | 4.28e-29 | 111 |
MS.gene03111.t1 | AT4G24240 | 56.977 | 86 | 36 | 1 | 9 | 94 | 256 | 340 | 7.88e-28 | 108 |
MS.gene03111.t1 | AT5G45050 | 55.914 | 93 | 36 | 1 | 7 | 99 | 1129 | 1216 | 1.12e-26 | 107 |
MS.gene03111.t1 | AT2G30590 | 56.098 | 82 | 35 | 1 | 11 | 92 | 290 | 370 | 1.13e-26 | 105 |
MS.gene03111.t1 | AT5G45050 | 55.914 | 93 | 36 | 1 | 7 | 99 | 1157 | 1244 | 1.27e-26 | 107 |
MS.gene03111.t1 | AT5G45050 | 55.914 | 93 | 36 | 1 | 7 | 99 | 1018 | 1105 | 1.46e-26 | 107 |
MS.gene03111.t1 | AT4G31550 | 54.878 | 82 | 36 | 1 | 11 | 92 | 222 | 302 | 2.43e-26 | 103 |
MS.gene03111.t1 | AT4G31550 | 54.321 | 81 | 36 | 1 | 12 | 92 | 224 | 303 | 1.08e-25 | 102 |
MS.gene03111.t1 | AT3G04670 | 51.648 | 91 | 43 | 1 | 3 | 93 | 231 | 320 | 2.19e-25 | 101 |
MS.gene03111.t1 | AT2G24570 | 54.321 | 81 | 36 | 1 | 12 | 92 | 221 | 300 | 4.15e-25 | 100 |
MS.gene03111.t1 | AT5G28650 | 50.549 | 91 | 44 | 1 | 3 | 93 | 231 | 320 | 6.01e-25 | 100 |
MS.gene03111.t1 | AT5G46350 | 51.220 | 82 | 39 | 1 | 36 | 117 | 184 | 264 | 1.76e-21 | 90.9 |
MS.gene03111.t1 | AT2G04880 | 44.828 | 87 | 45 | 2 | 36 | 120 | 308 | 393 | 1.73e-19 | 86.7 |
MS.gene03111.t1 | AT2G04880 | 44.828 | 87 | 45 | 2 | 36 | 120 | 284 | 369 | 1.82e-19 | 86.3 |
MS.gene03111.t1 | AT4G04450 | 56.452 | 62 | 27 | 0 | 35 | 96 | 198 | 259 | 5.17e-19 | 85.1 |
MS.gene03111.t1 | AT4G18170 | 56.667 | 60 | 25 | 1 | 36 | 95 | 173 | 231 | 5.32e-19 | 84.0 |
MS.gene03111.t1 | AT4G04450 | 56.452 | 62 | 27 | 0 | 35 | 96 | 292 | 353 | 7.38e-19 | 84.7 |
MS.gene03111.t1 | AT1G62300 | 54.839 | 62 | 28 | 0 | 35 | 96 | 312 | 373 | 1.27e-18 | 84.3 |
MS.gene03111.t1 | AT4G22070 | 54.839 | 62 | 28 | 0 | 35 | 96 | 297 | 358 | 2.00e-18 | 83.6 |
MS.gene03111.t1 | AT4G22070 | 54.839 | 62 | 28 | 0 | 35 | 96 | 297 | 358 | 2.00e-18 | 83.6 |
MS.gene03111.t1 | AT4G22070 | 54.839 | 62 | 28 | 0 | 35 | 96 | 297 | 358 | 2.00e-18 | 83.6 |
MS.gene03111.t1 | AT4G22070 | 54.839 | 62 | 28 | 0 | 35 | 96 | 297 | 358 | 2.00e-18 | 83.6 |
MS.gene03111.t1 | AT1G29860 | 53.333 | 60 | 27 | 1 | 36 | 95 | 137 | 195 | 2.43e-18 | 81.6 |
MS.gene03111.t1 | AT5G45260 | 45.455 | 99 | 43 | 4 | 17 | 113 | 1197 | 1286 | 2.56e-18 | 83.6 |
MS.gene03111.t1 | AT4G01720 | 53.846 | 65 | 30 | 0 | 32 | 96 | 236 | 300 | 1.73e-17 | 80.9 |
MS.gene03111.t1 | AT2G40740 | 42.424 | 99 | 49 | 2 | 1 | 91 | 133 | 231 | 2.09e-17 | 79.3 |
MS.gene03111.t1 | AT2G40740 | 42.857 | 98 | 48 | 2 | 1 | 90 | 142 | 239 | 2.50e-17 | 79.3 |
MS.gene03111.t1 | AT2G03340 | 42.574 | 101 | 43 | 3 | 11 | 98 | 379 | 477 | 5.94e-17 | 79.3 |
MS.gene03111.t1 | AT2G03340 | 41.379 | 87 | 44 | 3 | 28 | 114 | 243 | 322 | 3.63e-14 | 71.2 |
MS.gene03111.t1 | AT1G68150 | 53.333 | 60 | 28 | 0 | 36 | 95 | 236 | 295 | 1.43e-16 | 77.8 |
MS.gene03111.t1 | AT4G31800 | 41.250 | 80 | 46 | 1 | 16 | 95 | 93 | 171 | 3.08e-16 | 75.5 |
MS.gene03111.t1 | AT1G18860 | 52.459 | 61 | 29 | 0 | 35 | 95 | 239 | 299 | 3.35e-16 | 77.0 |
MS.gene03111.t1 | AT4G31800 | 45.455 | 66 | 36 | 0 | 30 | 95 | 171 | 236 | 4.77e-16 | 75.9 |
MS.gene03111.t1 | AT5G15130 | 50.820 | 61 | 30 | 0 | 35 | 95 | 227 | 287 | 4.88e-16 | 76.6 |
MS.gene03111.t1 | AT5G15130 | 50.820 | 61 | 30 | 0 | 35 | 95 | 185 | 245 | 5.38e-16 | 76.6 |
MS.gene03111.t1 | AT5G07100 | 49.206 | 63 | 31 | 1 | 36 | 98 | 142 | 203 | 8.27e-16 | 73.6 |
MS.gene03111.t1 | AT5G07100 | 30.252 | 119 | 74 | 3 | 27 | 139 | 16 | 131 | 8.46e-11 | 60.1 |
MS.gene03111.t1 | AT5G07100 | 49.206 | 63 | 31 | 1 | 36 | 98 | 142 | 203 | 8.27e-16 | 73.6 |
MS.gene03111.t1 | AT5G07100 | 30.252 | 119 | 74 | 3 | 27 | 139 | 16 | 131 | 8.46e-11 | 60.1 |
MS.gene03111.t1 | AT5G07100 | 49.206 | 63 | 31 | 1 | 36 | 98 | 142 | 203 | 8.27e-16 | 73.6 |
MS.gene03111.t1 | AT5G07100 | 30.252 | 119 | 74 | 3 | 27 | 139 | 16 | 131 | 8.46e-11 | 60.1 |
MS.gene03111.t1 | AT5G07100 | 49.206 | 63 | 31 | 1 | 36 | 98 | 142 | 203 | 8.27e-16 | 73.6 |
MS.gene03111.t1 | AT5G07100 | 30.252 | 119 | 74 | 3 | 27 | 139 | 16 | 131 | 8.46e-11 | 60.1 |
MS.gene03111.t1 | AT4G26440 | 43.902 | 82 | 43 | 3 | 33 | 114 | 176 | 254 | 8.50e-16 | 75.9 |
MS.gene03111.t1 | AT4G26440 | 48.438 | 64 | 32 | 1 | 36 | 99 | 373 | 435 | 4.27e-14 | 70.9 |
MS.gene03111.t1 | AT5G26170 | 50.000 | 58 | 28 | 1 | 36 | 93 | 114 | 170 | 9.01e-16 | 72.8 |
MS.gene03111.t1 | AT1G13960 | 51.667 | 60 | 28 | 1 | 36 | 95 | 410 | 468 | 9.41e-16 | 75.9 |
MS.gene03111.t1 | AT1G13960 | 38.384 | 99 | 58 | 3 | 10 | 108 | 204 | 299 | 1.48e-14 | 72.4 |
MS.gene03111.t1 | AT1G13960 | 51.667 | 60 | 28 | 1 | 36 | 95 | 257 | 315 | 1.05e-15 | 75.1 |
MS.gene03111.t1 | AT1G13960 | 44.872 | 78 | 40 | 3 | 31 | 108 | 72 | 146 | 1.86e-14 | 71.6 |
MS.gene03111.t1 | AT2G25000 | 45.455 | 66 | 36 | 0 | 30 | 95 | 98 | 163 | 1.52e-15 | 73.2 |
MS.gene03111.t1 | AT2G25000 | 45.455 | 66 | 36 | 0 | 30 | 95 | 98 | 163 | 1.52e-15 | 73.2 |
MS.gene03111.t1 | AT4G30935 | 47.619 | 63 | 32 | 1 | 36 | 98 | 332 | 393 | 1.68e-15 | 75.1 |
MS.gene03111.t1 | AT2G37260 | 43.678 | 87 | 48 | 1 | 8 | 94 | 240 | 325 | 2.07e-15 | 74.3 |
MS.gene03111.t1 | AT2G37260 | 48.333 | 60 | 29 | 2 | 36 | 95 | 84 | 141 | 1.37e-11 | 63.2 |
MS.gene03111.t1 | AT2G37260 | 43.678 | 87 | 48 | 1 | 8 | 94 | 242 | 327 | 2.14e-15 | 74.3 |
MS.gene03111.t1 | AT2G37260 | 48.333 | 60 | 29 | 2 | 36 | 95 | 86 | 143 | 1.42e-11 | 63.2 |
MS.gene03111.t1 | AT4G23810 | 32.847 | 137 | 86 | 2 | 6 | 140 | 129 | 261 | 2.29e-15 | 73.9 |
MS.gene03111.t1 | AT2G47260 | 48.333 | 60 | 30 | 1 | 36 | 95 | 175 | 233 | 2.41e-15 | 73.9 |
MS.gene03111.t1 | AT2G37260 | 43.678 | 87 | 48 | 1 | 8 | 94 | 322 | 407 | 2.68e-15 | 74.3 |
MS.gene03111.t1 | AT2G37260 | 48.333 | 60 | 29 | 2 | 36 | 95 | 166 | 223 | 1.25e-11 | 63.5 |
MS.gene03111.t1 | AT5G49520 | 50.000 | 60 | 29 | 1 | 36 | 95 | 222 | 280 | 2.72e-15 | 74.3 |
MS.gene03111.t1 | AT5G07100 | 49.206 | 63 | 31 | 1 | 36 | 98 | 235 | 296 | 2.85e-15 | 73.6 |
MS.gene03111.t1 | AT2G38470 | 50.794 | 63 | 30 | 1 | 36 | 98 | 363 | 424 | 2.96e-15 | 74.3 |
MS.gene03111.t1 | AT2G38470 | 46.667 | 60 | 30 | 2 | 36 | 95 | 185 | 242 | 2.04e-11 | 63.2 |
MS.gene03111.t1 | AT3G01080 | 51.667 | 60 | 28 | 1 | 36 | 95 | 345 | 403 | 3.07e-15 | 74.3 |
MS.gene03111.t1 | AT3G01080 | 47.059 | 68 | 34 | 2 | 31 | 98 | 201 | 266 | 1.36e-13 | 69.3 |
MS.gene03111.t1 | AT4G11070 | 40.426 | 94 | 52 | 2 | 8 | 97 | 82 | 175 | 3.28e-15 | 73.2 |
MS.gene03111.t1 | AT4G11070 | 40.426 | 94 | 52 | 2 | 8 | 97 | 114 | 207 | 3.48e-15 | 73.2 |
MS.gene03111.t1 | AT2G25000 | 45.455 | 66 | 36 | 0 | 30 | 95 | 120 | 185 | 3.58e-15 | 72.4 |
MS.gene03111.t1 | AT3G01080 | 51.667 | 60 | 28 | 1 | 36 | 95 | 307 | 365 | 3.88e-15 | 73.9 |
MS.gene03111.t1 | AT3G01080 | 47.059 | 68 | 34 | 2 | 31 | 98 | 163 | 228 | 1.43e-13 | 69.3 |
MS.gene03111.t1 | AT2G25000 | 45.455 | 66 | 36 | 0 | 30 | 95 | 141 | 206 | 4.10e-15 | 72.8 |
MS.gene03111.t1 | AT4G26640 | 50.000 | 60 | 29 | 1 | 36 | 95 | 206 | 264 | 4.10e-15 | 73.6 |
MS.gene03111.t1 | AT4G26640 | 45.161 | 62 | 32 | 2 | 36 | 97 | 36 | 95 | 5.30e-11 | 61.6 |
MS.gene03111.t1 | AT4G26640 | 50.000 | 60 | 29 | 1 | 36 | 95 | 206 | 264 | 4.10e-15 | 73.6 |
MS.gene03111.t1 | AT4G26640 | 45.161 | 62 | 32 | 2 | 36 | 97 | 36 | 95 | 5.30e-11 | 61.6 |
MS.gene03111.t1 | AT4G26640 | 50.000 | 60 | 29 | 1 | 36 | 95 | 206 | 264 | 4.10e-15 | 73.6 |
MS.gene03111.t1 | AT4G26640 | 45.161 | 62 | 32 | 2 | 36 | 97 | 36 | 95 | 5.30e-11 | 61.6 |
MS.gene03111.t1 | AT4G26640 | 50.000 | 60 | 29 | 1 | 36 | 95 | 206 | 264 | 4.10e-15 | 73.6 |
MS.gene03111.t1 | AT4G26640 | 45.161 | 62 | 32 | 2 | 36 | 97 | 36 | 95 | 5.30e-11 | 61.6 |
MS.gene03111.t1 | AT4G26640 | 50.000 | 60 | 29 | 1 | 36 | 95 | 382 | 440 | 4.16e-15 | 73.9 |
MS.gene03111.t1 | AT4G26640 | 45.161 | 62 | 32 | 2 | 36 | 97 | 212 | 271 | 5.78e-11 | 62.0 |
MS.gene03111.t1 | AT4G26640 | 50.000 | 60 | 29 | 1 | 36 | 95 | 310 | 368 | 4.26e-15 | 73.9 |
MS.gene03111.t1 | AT4G26640 | 45.161 | 62 | 32 | 2 | 36 | 97 | 140 | 199 | 5.98e-11 | 61.6 |
MS.gene03111.t1 | AT4G26640 | 50.000 | 60 | 29 | 1 | 36 | 95 | 342 | 400 | 4.57e-15 | 73.9 |
MS.gene03111.t1 | AT4G26640 | 45.161 | 62 | 32 | 2 | 36 | 97 | 172 | 231 | 6.67e-11 | 61.6 |
MS.gene03111.t1 | AT2G21900 | 41.860 | 86 | 43 | 2 | 16 | 95 | 84 | 168 | 4.96e-15 | 71.2 |
MS.gene03111.t1 | AT3G62340 | 45.455 | 77 | 38 | 2 | 36 | 109 | 119 | 194 | 5.19e-15 | 72.4 |
MS.gene03111.t1 | AT1G80840 | 34.615 | 104 | 67 | 1 | 15 | 117 | 125 | 228 | 6.10e-15 | 72.4 |
MS.gene03111.t1 | AT1G69310 | 49.153 | 59 | 29 | 1 | 36 | 94 | 148 | 205 | 6.74e-15 | 72.4 |
MS.gene03111.t1 | AT1G69310 | 49.153 | 59 | 29 | 1 | 36 | 94 | 148 | 205 | 6.74e-15 | 72.4 |
MS.gene03111.t1 | AT1G69310 | 49.153 | 59 | 29 | 1 | 36 | 94 | 148 | 205 | 6.74e-15 | 72.4 |
MS.gene03111.t1 | AT1G69810 | 50.000 | 62 | 30 | 1 | 35 | 95 | 203 | 264 | 6.85e-15 | 73.2 |
MS.gene03111.t1 | AT1G69810 | 50.000 | 62 | 30 | 1 | 35 | 95 | 145 | 206 | 1.04e-14 | 72.0 |
MS.gene03111.t1 | AT5G56270 | 49.206 | 63 | 31 | 1 | 36 | 98 | 488 | 549 | 4.19e-14 | 71.2 |
MS.gene03111.t1 | AT5G56270 | 47.692 | 65 | 32 | 2 | 33 | 97 | 271 | 333 | 1.70e-13 | 69.3 |
MS.gene03111.t1 | AT3G01970 | 46.774 | 62 | 32 | 1 | 36 | 97 | 66 | 126 | 1.25e-13 | 66.2 |
MS.gene03111.t1 | AT3G01080 | 47.692 | 65 | 32 | 2 | 31 | 95 | 201 | 263 | 1.28e-13 | 68.9 |
MS.gene03111.t1 | AT1G64000 | 49.123 | 57 | 28 | 1 | 36 | 92 | 115 | 170 | 2.50e-13 | 66.6 |
MS.gene03111.t1 | AT1G55600 | 36.782 | 87 | 50 | 2 | 10 | 96 | 286 | 367 | 5.73e-13 | 67.8 |
MS.gene03111.t1 | AT2G30250 | 48.333 | 60 | 30 | 1 | 36 | 95 | 329 | 387 | 6.05e-13 | 67.4 |
MS.gene03111.t1 | AT5G41570 | 49.123 | 57 | 28 | 1 | 36 | 92 | 99 | 154 | 9.30e-13 | 64.7 |
MS.gene03111.t1 | AT1G66560 | 52.542 | 59 | 26 | 1 | 34 | 90 | 102 | 160 | 9.89e-13 | 65.9 |
MS.gene03111.t1 | AT2G46130 | 47.368 | 57 | 29 | 1 | 36 | 92 | 31 | 86 | 1.62e-12 | 62.4 |
MS.gene03111.t1 | AT2G46400 | 40.000 | 80 | 45 | 2 | 28 | 104 | 97 | 176 | 1.71e-12 | 65.5 |
MS.gene03111.t1 | AT2G44745 | 49.123 | 57 | 28 | 1 | 36 | 92 | 146 | 201 | 2.32e-12 | 64.3 |
MS.gene03111.t1 | AT5G13080 | 44.068 | 59 | 32 | 1 | 36 | 94 | 68 | 125 | 2.47e-12 | 62.8 |
MS.gene03111.t1 | AT1G80590 | 39.130 | 92 | 50 | 2 | 5 | 90 | 51 | 142 | 2.68e-12 | 64.3 |
MS.gene03111.t1 | AT5G43290 | 38.542 | 96 | 48 | 2 | 1 | 96 | 90 | 174 | 5.46e-12 | 63.9 |
MS.gene03111.t1 | AT3G56400 | 35.802 | 81 | 48 | 2 | 12 | 90 | 99 | 177 | 5.57e-12 | 63.9 |
MS.gene03111.t1 | AT5G01900 | 40.244 | 82 | 46 | 2 | 12 | 90 | 86 | 167 | 1.20e-11 | 62.8 |
MS.gene03111.t1 | AT5G24110 | 43.750 | 64 | 34 | 1 | 29 | 90 | 107 | 170 | 1.33e-11 | 63.2 |
MS.gene03111.t1 | AT4G39410 | 46.552 | 58 | 30 | 1 | 36 | 93 | 224 | 280 | 2.23e-11 | 62.4 |
MS.gene03111.t1 | AT1G66550 | 32.374 | 139 | 84 | 5 | 5 | 136 | 70 | 205 | 2.61e-11 | 61.6 |
MS.gene03111.t1 | AT1G66550 | 37.383 | 107 | 60 | 4 | 34 | 136 | 107 | 210 | 8.21e-11 | 60.5 |
Find 71 sgRNAs with CRISPR-Local
Find 101 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CACTCTCTTCTTCTGCTAAA+AGG | 0.248402 | 2.3:-69101253 | MS.gene03111:intron |
TCGGGTTCTTGTTCTTGTTC+TGG | 0.268469 | 2.3:+69100384 | None:intergenic |
TCTTGTTCTTGTTCTGGTTC+AGG | 0.273307 | 2.3:+69100390 | None:intergenic |
CTGGTGTTGCGGTAGTTTCT+TGG | 0.299051 | 2.3:+69100450 | None:intergenic |
CGGAGTGTTCGACGGTGTTT+TGG | 0.329073 | 2.3:-69100176 | MS.gene03111:CDS |
TGGATAAGGGGAACCTTTGA+TGG | 0.364500 | 2.3:+69100910 | None:intergenic |
GTTTGATGCGGTGTTGTTGC+TGG | 0.368100 | 2.3:+69100431 | None:intergenic |
GTCCCTTCCACATTCTTCAT+TGG | 0.371466 | 2.3:+69100983 | None:intergenic |
TGCCGATCTCGGAGAGTTGC+CGG | 0.372131 | 2.3:-69100196 | MS.gene03111:CDS |
TCATGGGCTTGGAGAAAGTA+TGG | 0.382534 | 2.3:-69100941 | MS.gene03111:CDS |
GAGAATGAATACCTTGGATA+AGG | 0.400647 | 2.3:+69100896 | None:intergenic |
CACCGTCTGATTCATGGGCT+TGG | 0.402885 | 2.3:-69100952 | MS.gene03111:CDS |
CACTCCACCGTCTGATTCAT+GGG | 0.406966 | 2.3:-69100957 | MS.gene03111:CDS |
ACACTCCACCGTCTGATTCA+TGG | 0.409389 | 2.3:-69100958 | MS.gene03111:CDS |
AGAATGAATACCTTGGATAA+GGG | 0.413010 | 2.3:+69100897 | None:intergenic |
TAGGCGAGGTATAAAGAAAA+GGG | 0.417404 | 2.3:-69101017 | MS.gene03111:CDS |
ATGTCGTTGTTTGCCGATCT+CGG | 0.427384 | 2.3:-69100207 | MS.gene03111:CDS |
AGTGTCTATGTTGGGAGAAG+AGG | 0.434526 | 2.3:-69100232 | MS.gene03111:CDS |
GATGAGTTAGGCGGATGGTT+TGG | 0.439520 | 2.3:-69100315 | MS.gene03111:CDS |
ATAGGCGAGGTATAAAGAAA+AGG | 0.449369 | 2.3:-69101018 | MS.gene03111:intron |
AGGAGGAGTGGTGCCGGCGC+CGG | 0.456828 | 2.3:-69100147 | MS.gene03111:CDS |
AGGCGGATGGTTTGGAGATG+TGG | 0.458894 | 2.3:-69100307 | MS.gene03111:CDS |
TTGCGGTAGTTTCTTGGTGG+TGG | 0.484307 | 2.3:+69100456 | None:intergenic |
GATATTCGTAAACGTTTCAT+CGG | 0.485537 | 2.3:+69100365 | None:intergenic |
GAGAAGGAAGTGTCTATGTT+GGG | 0.500215 | 2.3:-69100240 | MS.gene03111:CDS |
ATATTCGTAAACGTTTCATC+GGG | 0.505400 | 2.3:+69100366 | None:intergenic |
TGGCACGGCGTGGTTGTGAT+CGG | 0.521456 | 2.3:+69100476 | None:intergenic |
TTCTGAGTCTTTGTTTGATG+CGG | 0.524236 | 2.3:+69100419 | None:intergenic |
ATCGGACACTCCAACACTGC+CGG | 0.524605 | 2.3:+69100270 | None:intergenic |
GATCGGATCGCCGGCAGTGT+TGG | 0.529018 | 2.3:-69100280 | MS.gene03111:CDS |
ATTGCCACCGGTGATGAGTT+AGG | 0.530483 | 2.3:-69100327 | MS.gene03111:CDS |
AGGAGTGGTGCCGGCGCCGG+TGG | 0.532501 | 2.3:-69100144 | MS.gene03111:CDS |
GTAGTTTCTTGGTGGTGGCA+CGG | 0.532781 | 2.3:+69100461 | None:intergenic |
GGAGAAGGAAGTGTCTATGT+TGG | 0.533402 | 2.3:-69100241 | MS.gene03111:CDS |
AGAGGTAGGAGGAGTGGTGC+CGG | 0.538061 | 2.3:-69100153 | MS.gene03111:CDS |
GGATAAGGGGAACCTTTGAT+GGG | 0.548989 | 2.3:+69100911 | None:intergenic |
GTGTTGCGGTAGTTTCTTGG+TGG | 0.552712 | 2.3:+69100453 | None:intergenic |
ATTCCAATGAAGAATGTGGA+AGG | 0.559865 | 2.3:-69100986 | MS.gene03111:CDS |
TGTGGAGGCGATCGGATCGC+CGG | 0.565940 | 2.3:-69100289 | MS.gene03111:CDS |
GAATGAATACCTTGGATAAG+GGG | 0.571511 | 2.3:+69100898 | None:intergenic |
CGGTGTTGTTGCTGGTGTTG+CGG | 0.572453 | 2.3:+69100439 | None:intergenic |
CGCCGGTGGTGATGTTAGTG+TGG | 0.574656 | 2.3:-69100130 | MS.gene03111:CDS |
CTCCGGCAACTCTCCGAGAT+CGG | 0.577094 | 2.3:+69100194 | None:intergenic |
TTTGGAGATGTGGAGGCGAT+CGG | 0.579590 | 2.3:-69100297 | MS.gene03111:CDS |
TCCCACACTAACATCACCAC+CGG | 0.582238 | 2.3:+69100128 | None:intergenic |
AGAAATTCCAATGAAGAATG+TGG | 0.583073 | 2.3:-69100990 | MS.gene03111:CDS |
GATCGGAGGTGTATGTTACA+AGG | 0.587899 | 2.3:+69100493 | None:intergenic |
TATGTTACAAGGAGAACGGT+GGG | 0.590777 | 2.3:+69100504 | None:intergenic |
GAAAATTCAATGATTGCCAC+CGG | 0.593733 | 2.3:-69100339 | MS.gene03111:CDS |
ACTAACATCACCACCGGCGC+CGG | 0.599715 | 2.3:+69100134 | None:intergenic |
CTCCAAGCCCATGAATCAGA+CGG | 0.600001 | 2.3:+69100950 | None:intergenic |
GCCGGTGGTGATGTTAGTGT+GGG | 0.605737 | 2.3:-69100129 | MS.gene03111:CDS |
AGAGTTGCCGGAGTGTTCGA+CGG | 0.606059 | 2.3:-69100184 | MS.gene03111:CDS |
TTCCAATGAAGAATGTGGAA+GGG | 0.616216 | 2.3:-69100985 | MS.gene03111:CDS |
CAAAACACCGTCGAACACTC+CGG | 0.616354 | 2.3:+69100177 | None:intergenic |
CACGGCGTGGTTGTGATCGG+AGG | 0.619714 | 2.3:+69100479 | None:intergenic |
TCAAAGGTTCCCCTTATCCA+AGG | 0.623779 | 2.3:-69100907 | MS.gene03111:intron |
CGGATGGTTTGGAGATGTGG+AGG | 0.626281 | 2.3:-69100304 | MS.gene03111:CDS |
GAGCAATTAGCTTCAACTAG+TGG | 0.632709 | 2.3:+69100105 | None:intergenic |
ACTTCCTTCTCCGAAAACAT+CGG | 0.637465 | 2.3:+69100252 | None:intergenic |
CCGGTGATGAGTTAGGCGGA+TGG | 0.641308 | 2.3:-69100320 | MS.gene03111:CDS |
GGTGTATGTTACAAGGAGAA+CGG | 0.648738 | 2.3:+69100500 | None:intergenic |
TTCTTGGTGGTGGCACGGCG+TGG | 0.655603 | 2.3:+69100466 | None:intergenic |
CCATCCGCCTAACTCATCAC+CGG | 0.656119 | 2.3:+69100320 | None:intergenic |
GGAGAACGGTGGGGTCCATG+TGG | 0.658885 | 2.3:+69100514 | None:intergenic |
ACAAGTAGAAAGAAACCACA+TGG | 0.663213 | 2.3:-69100529 | MS.gene03111:CDS |
TCCGCCTAACTCATCACCGG+TGG | 0.676396 | 2.3:+69100323 | None:intergenic |
GTATGTTACAAGGAGAACGG+TGG | 0.715629 | 2.3:+69100503 | None:intergenic |
GCCACCGGTGATGAGTTAGG+CGG | 0.726711 | 2.3:-69100324 | MS.gene03111:CDS |
CAAGCCCATGAATCAGACGG+TGG | 0.730326 | 2.3:+69100953 | None:intergenic |
ATGTTACAAGGAGAACGGTG+GGG | 0.778163 | 2.3:+69100505 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATGTAAATATGTATAAT+AGG | - | chr2.3:69100328-69100347 | MS.gene03111:CDS | 10.0% |
!! | TCAAACTATATTAATATTGA+TGG | + | chr2.3:69100150-69100169 | None:intergenic | 15.0% |
!! | AATCTTATAAGAATTGCATA+CGG | + | chr2.3:69100743-69100762 | None:intergenic | 20.0% |
!! | CTTATAAGATTTACTCATAT+GGG | - | chr2.3:69100752-69100771 | MS.gene03111:intron | 20.0% |
!! | TCTTATAAGATTTACTCATA+TGG | - | chr2.3:69100751-69100770 | MS.gene03111:intron | 20.0% |
!! | TTATAAGATTTACTCATATG+GGG | - | chr2.3:69100753-69100772 | MS.gene03111:intron | 20.0% |
! | AGGACAATGTTTCAATAATT+TGG | + | chr2.3:69100591-69100610 | None:intergenic | 25.0% |
!! | ACACTCAAATTTTGCTTAAA+AGG | + | chr2.3:69100228-69100247 | None:intergenic | 25.0% |
!!! | TATTAGGGCTTTAAATTGAA+AGG | + | chr2.3:69100611-69100630 | None:intergenic | 25.0% |
ACCTCGATCTCTAATATATT+AGG | + | chr2.3:69100627-69100646 | None:intergenic | 30.0% | |
AGAAATTCCAATGAAGAATG+TGG | - | chr2.3:69100374-69100393 | MS.gene03111:CDS | 30.0% | |
AGAATGAATACCTTGGATAA+GGG | + | chr2.3:69100470-69100489 | None:intergenic | 30.0% | |
ATATTCGTAAACGTTTCATC+GGG | + | chr2.3:69101001-69101020 | None:intergenic | 30.0% | |
CCTCGATCTCTAATATATTA+GGG | + | chr2.3:69100626-69100645 | None:intergenic | 30.0% | |
GATATTCGTAAACGTTTCAT+CGG | + | chr2.3:69101002-69101021 | None:intergenic | 30.0% | |
GTAAATATGTATAATAGGCG+AGG | - | chr2.3:69100333-69100352 | MS.gene03111:CDS | 30.0% | |
TGTGACATGAATGAATGTAA+GGG | + | chr2.3:69100497-69100516 | None:intergenic | 30.0% | |
TTGTGACATGAATGAATGTA+AGG | + | chr2.3:69100498-69100517 | None:intergenic | 30.0% | |
! | GGCTTTTATGCAAAATTCAA+AGG | + | chr2.3:69100570-69100589 | None:intergenic | 30.0% |
! | TTACTCATATGGGGAAATTT+TGG | - | chr2.3:69100762-69100781 | MS.gene03111:intron | 30.0% |
ACAAGTAGAAAGAAACCACA+TGG | - | chr2.3:69100835-69100854 | MS.gene03111:intron | 35.0% | |
ATAGGCGAGGTATAAAGAAA+AGG | - | chr2.3:69100346-69100365 | MS.gene03111:CDS | 35.0% | |
ATTCCAATGAAGAATGTGGA+AGG | - | chr2.3:69100378-69100397 | MS.gene03111:CDS | 35.0% | |
CCCTAATATATTAGAGATCG+AGG | - | chr2.3:69100623-69100642 | MS.gene03111:intron | 35.0% | |
GAAAATTCAATGATTGCCAC+CGG | - | chr2.3:69101025-69101044 | MS.gene03111:intron | 35.0% | |
GAATGAATACCTTGGATAAG+GGG | + | chr2.3:69100469-69100488 | None:intergenic | 35.0% | |
GAGAATGAATACCTTGGATA+AGG | + | chr2.3:69100471-69100490 | None:intergenic | 35.0% | |
GTGACATGAATGAATGTAAG+GGG | + | chr2.3:69100496-69100515 | None:intergenic | 35.0% | |
TAGGCGAGGTATAAAGAAAA+GGG | - | chr2.3:69100347-69100366 | MS.gene03111:CDS | 35.0% | |
TATGGTCAAAAACCCATCAA+AGG | - | chr2.3:69100441-69100460 | MS.gene03111:CDS | 35.0% | |
TTCCAATGAAGAATGTGGAA+GGG | - | chr2.3:69100379-69100398 | MS.gene03111:CDS | 35.0% | |
! | TTCTGAGTCTTTGTTTGATG+CGG | + | chr2.3:69100948-69100967 | None:intergenic | 35.0% |
!! | CTTTCTACTTGTTTTCTTGC+TGG | + | chr2.3:69100827-69100846 | None:intergenic | 35.0% |
ACTTCCTTCTCCGAAAACAT+CGG | + | chr2.3:69101115-69101134 | None:intergenic | 40.0% | |
CACTCTCTTCTTCTGCTAAA+AGG | - | chr2.3:69100111-69100130 | MS.gene03111:CDS | 40.0% | |
GCGATGAAATATGTATGCTG+CGG | - | chr2.3:69100652-69100671 | MS.gene03111:intron | 40.0% | |
GGTGTATGTTACAAGGAGAA+CGG | + | chr2.3:69100867-69100886 | None:intergenic | 40.0% | |
TATGTTACAAGGAGAACGGT+GGG | + | chr2.3:69100863-69100882 | None:intergenic | 40.0% | |
! | GAGCAATTAGCTTCAACTAG+TGG | + | chr2.3:69101262-69101281 | None:intergenic | 40.0% |
!! | GAGAAGGAAGTGTCTATGTT+GGG | - | chr2.3:69101124-69101143 | MS.gene03111:intron | 40.0% |
!! | TCTTGTTCTTGTTCTGGTTC+AGG | + | chr2.3:69100977-69100996 | None:intergenic | 40.0% |
!!! | ATGGGGAAATTTTGGAACAG+AGG | - | chr2.3:69100770-69100789 | MS.gene03111:intron | 40.0% |
AGTGTCTATGTTGGGAGAAG+AGG | - | chr2.3:69101132-69101151 | MS.gene03111:intron | 45.0% | |
ATGTCGTTGTTTGCCGATCT+CGG | - | chr2.3:69101157-69101176 | MS.gene03111:intron | 45.0% | |
ATGTTACAAGGAGAACGGTG+GGG | + | chr2.3:69100862-69100881 | None:intergenic | 45.0% | |
CAAAACTACGTGCAGTTCTG+CGG | + | chr2.3:69100719-69100738 | None:intergenic | 45.0% | |
GGATAAGGGGAACCTTTGAT+GGG | + | chr2.3:69100456-69100475 | None:intergenic | 45.0% | |
GGGGATGAGAATGAATACCT+TGG | + | chr2.3:69100477-69100496 | None:intergenic | 45.0% | |
GTATGTTACAAGGAGAACGG+TGG | + | chr2.3:69100864-69100883 | None:intergenic | 45.0% | |
GTCCCTTCCACATTCTTCAT+TGG | + | chr2.3:69100384-69100403 | None:intergenic | 45.0% | |
TCAAAGGTTCCCCTTATCCA+AGG | - | chr2.3:69100457-69100476 | MS.gene03111:CDS | 45.0% | |
TCATGGGCTTGGAGAAAGTA+TGG | - | chr2.3:69100423-69100442 | MS.gene03111:CDS | 45.0% | |
TCGGGTTCTTGTTCTTGTTC+TGG | + | chr2.3:69100983-69101002 | None:intergenic | 45.0% | |
TGGATAAGGGGAACCTTTGA+TGG | + | chr2.3:69100457-69100476 | None:intergenic | 45.0% | |
! | GATCGGAGGTGTATGTTACA+AGG | + | chr2.3:69100874-69100893 | None:intergenic | 45.0% |
!! | GGAGAAGGAAGTGTCTATGT+TGG | - | chr2.3:69101123-69101142 | MS.gene03111:intron | 45.0% |
!! | GTTGGAGTGTCCGATGTTTT+CGG | - | chr2.3:69101102-69101121 | MS.gene03111:intron | 45.0% |
ACACTCCACCGTCTGATTCA+TGG | - | chr2.3:69100406-69100425 | MS.gene03111:CDS | 50.0% | |
ATTGCCACCGGTGATGAGTT+AGG | - | chr2.3:69101037-69101056 | MS.gene03111:intron | 50.0% | |
CAAAACACCGTCGAACACTC+CGG | + | chr2.3:69101190-69101209 | None:intergenic | 50.0% | |
CACTCCACCGTCTGATTCAT+GGG | - | chr2.3:69100407-69100426 | MS.gene03111:CDS | 50.0% | |
CTCCAAGCCCATGAATCAGA+CGG | + | chr2.3:69100417-69100436 | None:intergenic | 50.0% | |
GATGAGTTAGGCGGATGGTT+TGG | - | chr2.3:69101049-69101068 | MS.gene03111:intron | 50.0% | |
GTGTTGCGGTAGTTTCTTGG+TGG | + | chr2.3:69100914-69100933 | None:intergenic | 50.0% | |
TCCCACACTAACATCACCAC+CGG | + | chr2.3:69101239-69101258 | None:intergenic | 50.0% | |
TTGCGGTAGTTTCTTGGTGG+TGG | + | chr2.3:69100911-69100930 | None:intergenic | 50.0% | |
TTTGGAGATGTGGAGGCGAT+CGG | - | chr2.3:69101067-69101086 | MS.gene03111:intron | 50.0% | |
! | GTGTCCGATGTTTTCGGAGA+AGG | - | chr2.3:69101108-69101127 | MS.gene03111:intron | 50.0% |
!! | CTGGTGTTGCGGTAGTTTCT+TGG | + | chr2.3:69100917-69100936 | None:intergenic | 50.0% |
!! | GTAGTTTCTTGGTGGTGGCA+CGG | + | chr2.3:69100906-69100925 | None:intergenic | 50.0% |
!! | GTTTGATGCGGTGTTGTTGC+TGG | + | chr2.3:69100936-69100955 | None:intergenic | 50.0% |
!! | TTTTGGAGAGGTAGGAGGAG+TGG | - | chr2.3:69101205-69101224 | MS.gene03111:intron | 50.0% |
!!! | TGTTCGACGGTGTTTTGGAG+AGG | - | chr2.3:69101193-69101212 | MS.gene03111:intron | 50.0% |
ATCGGACACTCCAACACTGC+CGG | + | chr2.3:69101097-69101116 | None:intergenic | 55.0% | |
CAAGCCCATGAATCAGACGG+TGG | + | chr2.3:69100414-69100433 | None:intergenic | 55.0% | |
CACCGTCTGATTCATGGGCT+TGG | - | chr2.3:69100412-69100431 | MS.gene03111:CDS | 55.0% | |
CCATCCGCCTAACTCATCAC+CGG | + | chr2.3:69101047-69101066 | None:intergenic | 55.0% | |
! | AGAGTTGCCGGAGTGTTCGA+CGG | - | chr2.3:69101180-69101199 | MS.gene03111:intron | 55.0% |
! | AGGCGGATGGTTTGGAGATG+TGG | - | chr2.3:69101057-69101076 | MS.gene03111:intron | 55.0% |
! | CGGATGGTTTGGAGATGTGG+AGG | - | chr2.3:69101060-69101079 | MS.gene03111:intron | 55.0% |
! | GCCGGTGGTGATGTTAGTGT+GGG | - | chr2.3:69101235-69101254 | MS.gene03111:intron | 55.0% |
!! | CGGAGTGTTCGACGGTGTTT+TGG | - | chr2.3:69101188-69101207 | MS.gene03111:intron | 55.0% |
!! | CGGTGTTGTTGCTGGTGTTG+CGG | + | chr2.3:69100928-69100947 | None:intergenic | 55.0% |
!!! | CGACGGTGTTTTGGAGAGGT+AGG | - | chr2.3:69101197-69101216 | MS.gene03111:intron | 55.0% |
!!! | CGGTGTTTTGGAGAGGTAGG+AGG | - | chr2.3:69101200-69101219 | MS.gene03111:intron | 55.0% |
ACTAACATCACCACCGGCGC+CGG | + | chr2.3:69101233-69101252 | None:intergenic | 60.0% | |
AGAGGTAGGAGGAGTGGTGC+CGG | - | chr2.3:69101211-69101230 | MS.gene03111:intron | 60.0% | |
CCGGTGATGAGTTAGGCGGA+TGG | - | chr2.3:69101044-69101063 | MS.gene03111:intron | 60.0% | |
CTCCGGCAACTCTCCGAGAT+CGG | + | chr2.3:69101173-69101192 | None:intergenic | 60.0% | |
GCCACCGGTGATGAGTTAGG+CGG | - | chr2.3:69101040-69101059 | MS.gene03111:intron | 60.0% | |
TCCGCCTAACTCATCACCGG+TGG | + | chr2.3:69101044-69101063 | None:intergenic | 60.0% | |
TGCCGATCTCGGAGAGTTGC+CGG | - | chr2.3:69101168-69101187 | MS.gene03111:intron | 60.0% | |
TGGCACGGCGTGGTTGTGAT+CGG | + | chr2.3:69100891-69100910 | None:intergenic | 60.0% | |
! | CGCCGGTGGTGATGTTAGTG+TGG | - | chr2.3:69101234-69101253 | MS.gene03111:intron | 60.0% |
CACGGCGTGGTTGTGATCGG+AGG | + | chr2.3:69100888-69100907 | None:intergenic | 65.0% | |
GATCGGATCGCCGGCAGTGT+TGG | - | chr2.3:69101084-69101103 | MS.gene03111:intron | 65.0% | |
GGAGAACGGTGGGGTCCATG+TGG | + | chr2.3:69100853-69100872 | None:intergenic | 65.0% | |
TGTGGAGGCGATCGGATCGC+CGG | - | chr2.3:69101075-69101094 | MS.gene03111:intron | 65.0% | |
!! | TTCTTGGTGGTGGCACGGCG+TGG | + | chr2.3:69100901-69100920 | None:intergenic | 65.0% |
!! | AGGAGGAGTGGTGCCGGCGC+CGG | - | chr2.3:69101217-69101236 | MS.gene03111:intron | 75.0% |
!!! | AGGAGTGGTGCCGGCGCCGG+TGG | - | chr2.3:69101220-69101239 | MS.gene03111:intron | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 69100098 | 69101288 | 69100098 | ID=MS.gene03111 |
chr2.3 | mRNA | 69100098 | 69101288 | 69100098 | ID=MS.gene03111.t1;Parent=MS.gene03111 |
chr2.3 | exon | 69101254 | 69101288 | 69101254 | ID=MS.gene03111.t1.exon1;Parent=MS.gene03111.t1 |
chr2.3 | CDS | 69101254 | 69101288 | 69101254 | ID=cds.MS.gene03111.t1;Parent=MS.gene03111.t1 |
chr2.3 | exon | 69100908 | 69101036 | 69100908 | ID=MS.gene03111.t1.exon2;Parent=MS.gene03111.t1 |
chr2.3 | CDS | 69100908 | 69101036 | 69100908 | ID=cds.MS.gene03111.t1;Parent=MS.gene03111.t1 |
chr2.3 | exon | 69100098 | 69100596 | 69100098 | ID=MS.gene03111.t1.exon3;Parent=MS.gene03111.t1 |
chr2.3 | CDS | 69100098 | 69100596 | 69100098 | ID=cds.MS.gene03111.t1;Parent=MS.gene03111.t1 |
Gene Sequence |
Protein sequence |