Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031223.t1 | XP_013462017.1 | 91.5 | 434 | 25 | 2 | 1 | 426 | 1 | 430 | 7.70E-224 | 786.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031223.t1 | Q93Z18 | 58.2 | 428 | 150 | 6 | 1 | 416 | 1 | 411 | 1.7e-131 | 470.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031223.t1 | A0A072V2G9 | 91.5 | 434 | 25 | 2 | 1 | 426 | 1 | 430 | 5.6e-224 | 786.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031223.t1 | MTR_3g110180 | 95.853 | 434 | 6 | 2 | 1 | 426 | 1 | 430 | 0.0 | 858 |
MS.gene031223.t1 | MTR_3g110180 | 95.622 | 434 | 6 | 3 | 1 | 426 | 1 | 429 | 0.0 | 825 |
MS.gene031223.t1 | MTR_1g004990 | 60.417 | 432 | 152 | 3 | 1 | 424 | 1 | 421 | 0.0 | 523 |
MS.gene031223.t1 | MTR_6g087070 | 62.044 | 411 | 132 | 6 | 1 | 400 | 1 | 398 | 0.0 | 513 |
MS.gene031223.t1 | MTR_8g102930 | 59.039 | 437 | 155 | 6 | 1 | 426 | 1 | 424 | 5.83e-177 | 501 |
MS.gene031223.t1 | MTR_4g126010 | 64.162 | 346 | 109 | 3 | 1 | 337 | 1 | 340 | 1.68e-163 | 468 |
MS.gene031223.t1 | MTR_2g099670 | 65.205 | 342 | 108 | 3 | 1 | 331 | 1 | 342 | 2.54e-163 | 468 |
MS.gene031223.t1 | MTR_1g069720 | 66.352 | 318 | 99 | 1 | 1 | 310 | 1 | 318 | 4.24e-160 | 459 |
MS.gene031223.t1 | MTR_1g042280 | 67.752 | 307 | 91 | 1 | 1 | 299 | 2 | 308 | 1.71e-157 | 452 |
MS.gene031223.t1 | MTR_7g097160 | 65.312 | 320 | 103 | 1 | 1 | 312 | 1 | 320 | 6.66e-157 | 451 |
MS.gene031223.t1 | MTR_2g039930 | 58.933 | 375 | 129 | 6 | 1 | 356 | 1 | 369 | 1.52e-156 | 451 |
MS.gene031223.t1 | MTR_8g018310 | 64.179 | 335 | 103 | 4 | 1 | 327 | 1 | 326 | 2.33e-156 | 450 |
MS.gene031223.t1 | MTR_8g018310 | 64.179 | 335 | 103 | 4 | 1 | 327 | 1 | 326 | 1.75e-155 | 446 |
MS.gene031223.t1 | MTR_1g075870 | 65.015 | 323 | 97 | 2 | 1 | 315 | 2 | 316 | 2.20e-155 | 442 |
MS.gene031223.t1 | MTR_1g075870 | 65.015 | 323 | 97 | 2 | 1 | 315 | 2 | 316 | 2.29e-154 | 445 |
MS.gene031223.t1 | MTR_1g042280 | 70.149 | 268 | 80 | 0 | 32 | 299 | 9 | 276 | 9.31e-145 | 414 |
MS.gene031223.t1 | MTR_0492s0030 | 65.000 | 300 | 95 | 2 | 1 | 290 | 1 | 300 | 1.96e-140 | 406 |
MS.gene031223.t1 | MTR_0543s0020 | 65.000 | 300 | 95 | 2 | 1 | 290 | 1 | 300 | 1.96e-140 | 406 |
MS.gene031223.t1 | MTR_2g099670 | 68.214 | 280 | 86 | 2 | 55 | 331 | 11 | 290 | 3.93e-140 | 407 |
MS.gene031223.t1 | MTR_1g075870 | 68.045 | 266 | 77 | 1 | 50 | 315 | 2 | 259 | 4.18e-134 | 387 |
MS.gene031223.t1 | MTR_2g039930 | 60.204 | 294 | 100 | 5 | 74 | 356 | 1 | 288 | 1.11e-122 | 362 |
MS.gene031223.t1 | MTR_7g097160 | 68.927 | 177 | 55 | 0 | 136 | 312 | 25 | 201 | 2.61e-85 | 264 |
MS.gene031223.t1 | MTR_3g110240 | 37.121 | 264 | 155 | 5 | 7 | 265 | 133 | 390 | 7.91e-51 | 182 |
MS.gene031223.t1 | MTR_1g007150 | 36.364 | 264 | 157 | 5 | 7 | 265 | 136 | 393 | 7.45e-50 | 179 |
MS.gene031223.t1 | MTR_7g006030 | 35.206 | 267 | 162 | 5 | 7 | 265 | 49 | 312 | 8.55e-50 | 178 |
MS.gene031223.t1 | MTR_7g085540 | 36.296 | 270 | 162 | 5 | 7 | 269 | 159 | 425 | 2.59e-49 | 178 |
MS.gene031223.t1 | MTR_1g116210 | 34.286 | 280 | 162 | 6 | 5 | 265 | 113 | 389 | 2.94e-47 | 172 |
MS.gene031223.t1 | MTR_8g014050 | 34.444 | 270 | 161 | 7 | 7 | 265 | 140 | 404 | 1.47e-42 | 159 |
MS.gene031223.t1 | MTR_7g116400 | 52.308 | 65 | 30 | 1 | 74 | 137 | 3 | 67 | 7.64e-16 | 72.8 |
MS.gene031223.t1 | MTR_7g118020 | 26.728 | 217 | 133 | 5 | 6 | 205 | 141 | 348 | 7.21e-12 | 67.8 |
MS.gene031223.t1 | MTR_4g086660 | 29.448 | 163 | 105 | 3 | 44 | 205 | 188 | 341 | 7.91e-12 | 67.4 |
MS.gene031223.t1 | MTR_7g073520 | 32.800 | 125 | 71 | 3 | 99 | 221 | 250 | 363 | 8.38e-12 | 67.4 |
MS.gene031223.t1 | MTR_8g079790 | 28.221 | 163 | 107 | 3 | 44 | 205 | 179 | 332 | 1.48e-11 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031223.t1 | AT4G28880 | 59.346 | 428 | 145 | 6 | 1 | 416 | 1 | 411 | 5.05e-178 | 503 |
MS.gene031223.t1 | AT4G28880 | 59.346 | 428 | 145 | 6 | 1 | 416 | 1 | 411 | 5.05e-178 | 503 |
MS.gene031223.t1 | AT4G28880 | 59.346 | 428 | 145 | 6 | 1 | 416 | 1 | 411 | 5.05e-178 | 503 |
MS.gene031223.t1 | AT4G28880 | 59.346 | 428 | 145 | 6 | 1 | 416 | 1 | 411 | 5.05e-178 | 503 |
MS.gene031223.t1 | AT4G28860 | 59.569 | 418 | 144 | 5 | 1 | 409 | 1 | 402 | 2.60e-176 | 499 |
MS.gene031223.t1 | AT4G28860 | 71.384 | 318 | 83 | 1 | 1 | 310 | 1 | 318 | 7.65e-175 | 494 |
MS.gene031223.t1 | AT4G26100 | 55.422 | 415 | 143 | 9 | 1 | 399 | 1 | 389 | 2.67e-159 | 457 |
MS.gene031223.t1 | AT5G57015 | 64.308 | 325 | 106 | 2 | 1 | 315 | 1 | 325 | 1.34e-156 | 449 |
MS.gene031223.t1 | AT1G72710 | 64.329 | 328 | 107 | 3 | 1 | 319 | 1 | 327 | 1.42e-156 | 451 |
MS.gene031223.t1 | AT5G44100 | 69.360 | 297 | 83 | 1 | 1 | 289 | 1 | 297 | 1.84e-155 | 448 |
MS.gene031223.t1 | AT5G44100 | 69.360 | 297 | 83 | 1 | 1 | 289 | 1 | 297 | 1.84e-155 | 448 |
MS.gene031223.t1 | AT1G03930 | 67.340 | 297 | 89 | 1 | 1 | 289 | 1 | 297 | 1.97e-154 | 445 |
MS.gene031223.t1 | AT4G28540 | 68.121 | 298 | 87 | 1 | 1 | 290 | 5 | 302 | 4.38e-154 | 445 |
MS.gene031223.t1 | AT3G23340 | 64.688 | 320 | 104 | 2 | 1 | 312 | 1 | 319 | 5.93e-154 | 443 |
MS.gene031223.t1 | AT2G19470 | 62.614 | 329 | 108 | 2 | 1 | 321 | 1 | 322 | 2.17e-153 | 441 |
MS.gene031223.t1 | AT4G14340 | 64.062 | 320 | 106 | 2 | 1 | 312 | 7 | 325 | 6.82e-152 | 438 |
MS.gene031223.t1 | AT4G14340 | 62.090 | 335 | 111 | 2 | 1 | 327 | 7 | 333 | 9.54e-152 | 434 |
MS.gene031223.t1 | AT5G43320 | 68.013 | 297 | 87 | 1 | 1 | 289 | 1 | 297 | 2.26e-150 | 435 |
MS.gene031223.t1 | AT3G23340 | 64.423 | 312 | 104 | 2 | 1 | 312 | 1 | 305 | 8.44e-150 | 432 |
MS.gene031223.t1 | AT5G43320 | 61.383 | 347 | 122 | 3 | 1 | 339 | 1 | 343 | 1.44e-149 | 429 |
MS.gene031223.t1 | AT5G43320 | 61.383 | 347 | 122 | 3 | 1 | 339 | 1 | 343 | 1.44e-149 | 429 |
MS.gene031223.t1 | AT1G04440 | 67.340 | 297 | 89 | 1 | 1 | 289 | 1 | 297 | 2.20e-148 | 430 |
MS.gene031223.t1 | AT4G08800 | 58.163 | 294 | 83 | 3 | 1 | 286 | 1 | 262 | 9.53e-121 | 353 |
MS.gene031223.t1 | AT3G13670 | 35.424 | 271 | 164 | 5 | 7 | 269 | 149 | 416 | 1.51e-50 | 182 |
MS.gene031223.t1 | AT2G25760 | 36.194 | 268 | 162 | 4 | 7 | 265 | 119 | 386 | 2.27e-50 | 181 |
MS.gene031223.t1 | AT3G03940 | 36.296 | 270 | 162 | 5 | 7 | 269 | 152 | 418 | 2.44e-50 | 181 |
MS.gene031223.t1 | AT2G25760 | 36.567 | 268 | 158 | 5 | 7 | 265 | 119 | 383 | 7.72e-50 | 179 |
MS.gene031223.t1 | AT5G18190 | 35.662 | 272 | 165 | 5 | 7 | 271 | 142 | 410 | 3.00e-49 | 178 |
MS.gene031223.t1 | AT5G18190 | 35.662 | 272 | 165 | 5 | 7 | 271 | 142 | 410 | 3.00e-49 | 178 |
MS.gene031223.t1 | AT3G50530 | 30.061 | 163 | 104 | 3 | 44 | 205 | 199 | 352 | 2.48e-13 | 72.4 |
MS.gene031223.t1 | AT3G49370 | 28.440 | 218 | 130 | 6 | 7 | 207 | 140 | 348 | 1.04e-11 | 67.4 |
MS.gene031223.t1 | AT3G50530 | 28.495 | 186 | 108 | 6 | 44 | 205 | 199 | 383 | 3.84e-11 | 65.5 |
MS.gene031223.t1 | AT5G24430 | 27.854 | 219 | 130 | 6 | 7 | 207 | 141 | 349 | 3.97e-11 | 65.5 |
MS.gene031223.t1 | AT2G46700 | 29.082 | 196 | 118 | 5 | 11 | 205 | 172 | 347 | 9.51e-11 | 64.3 |
Find 98 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAAGTTCCTGTGGGCCTTTC+AGG | 0.062348 | 3.4:-95159856 | None:intergenic |
TCAAACCTAGGTCGTGTATT+TGG | 0.098979 | 3.4:+95159877 | MS.gene031223:CDS |
AGGAATATGCTTGCTTGTTT+TGG | 0.195324 | 3.4:-95156590 | None:intergenic |
TATTCTGGTTATGGATCTTC+TGG | 0.212846 | 3.4:+95155993 | MS.gene031223:CDS |
TTTGATCAAGATCCAGATTA+TGG | 0.217415 | 3.4:+95158125 | MS.gene031223:CDS |
TTGGAGAAGACTGTATAATT+TGG | 0.243957 | 3.4:-95155820 | None:intergenic |
GAATCCAGCTGCTTGAAATA+TGG | 0.275973 | 3.4:-95159909 | None:intergenic |
CAAGCAAGCATATTCCTTAT+AGG | 0.278492 | 3.4:+95156596 | MS.gene031223:CDS |
ATAACTTCCTAATGGGTATT+AGG | 0.293154 | 3.4:+95156388 | MS.gene031223:CDS |
GCAGCTGGATTCCTTCTTTA+CGG | 0.295950 | 3.4:+95159920 | MS.gene031223:CDS |
AGAGAGAATAAAAGTTTAAC+AGG | 0.303019 | 3.4:+95157389 | MS.gene031223:intron |
CAAACCTAGGTCGTGTATTT+GGG | 0.321394 | 3.4:+95159878 | MS.gene031223:CDS |
GCAAAGTCGCCGTGATGATT+TGG | 0.329153 | 3.4:+95157535 | MS.gene031223:CDS |
ATACCCATTAGGAAGTTATC+TGG | 0.331317 | 3.4:-95156384 | None:intergenic |
TAGGTTTATATTATTGATTT+CGG | 0.339874 | 3.4:+95156544 | MS.gene031223:intron |
TGATGGAGATCATAATATTC+TGG | 0.354764 | 3.4:+95155978 | MS.gene031223:CDS |
GGATCTTCTGGGACGTAGTC+TGG | 0.355238 | 3.4:+95156005 | MS.gene031223:CDS |
AGCATTTAGATTCTTTAGAT+TGG | 0.357090 | 3.4:-95159548 | None:intergenic |
CAAACCAGATAACTTCCTAA+TGG | 0.358154 | 3.4:+95156380 | MS.gene031223:CDS |
CGCTTTAAGAATCCATAATC+TGG | 0.362175 | 3.4:-95158137 | None:intergenic |
GTCCTTATGTACTTCTTAAG+AGG | 0.366081 | 3.4:+95157572 | MS.gene031223:CDS |
AACAACAAAATATACCTATA+AGG | 0.367234 | 3.4:-95156610 | None:intergenic |
CGTGATGATTTGGAGTCTAT+TGG | 0.367974 | 3.4:+95157545 | MS.gene031223:CDS |
AGATCATAATATTCTGGTTA+TGG | 0.373211 | 3.4:+95155984 | MS.gene031223:CDS |
TGAGGTCGTTGCCGTCAAAA+TGG | 0.379560 | 3.4:+95155324 | MS.gene031223:CDS |
TTTAAGATTGGTCGCAAAAT+CGG | 0.381240 | 3.4:+95155160 | MS.gene031223:CDS |
TATATTATTGATTTCGGACT+AGG | 0.399991 | 3.4:+95156550 | MS.gene031223:CDS |
CACATTTGGACGATCAAGAT+TGG | 0.402023 | 3.4:-95159506 | None:intergenic |
TTAGGCTGCACACGCACATT+TGG | 0.429031 | 3.4:-95159520 | None:intergenic |
AAACCAGATAACTTCCTAAT+GGG | 0.430261 | 3.4:+95156381 | MS.gene031223:CDS |
TTTATAACTTACTTTCTCCT+TGG | 0.432685 | 3.4:-95155839 | None:intergenic |
AATCCAGCTGCTTGAAATAT+GGG | 0.440658 | 3.4:-95159908 | None:intergenic |
ACTCCCATATTTCAAGCAGC+TGG | 0.449190 | 3.4:+95159905 | MS.gene031223:CDS |
TGCTCCCGCAGAAGACAAAA+AGG | 0.451965 | 3.4:-95156032 | None:intergenic |
TTTAGATTCTTTAGATTGGA+TGG | 0.456240 | 3.4:-95159544 | None:intergenic |
GTTGGCGGAAAGTTTAAGAT+TGG | 0.473575 | 3.4:+95155148 | MS.gene031223:CDS |
ATTCTGGTTATGGATCTTCT+GGG | 0.476383 | 3.4:+95155994 | MS.gene031223:CDS |
ACTATGACAATTTATTCGAC+TGG | 0.479555 | 3.4:+95158737 | MS.gene031223:CDS |
TGCAATACTCACTTAGGAAT+CGG | 0.487644 | 3.4:+95157431 | MS.gene031223:CDS |
TTCTTTAGATTGGATGGCTT+AGG | 0.488699 | 3.4:-95159538 | None:intergenic |
TTCCTCTTAAGAAGTACATA+AGG | 0.490195 | 3.4:-95157574 | None:intergenic |
GAAGAAATTCGCCGTAAAGA+AGG | 0.496549 | 3.4:-95159931 | None:intergenic |
CAGTCTACAACCAGTGGTTG+TGG | 0.500770 | 3.4:+95159000 | MS.gene031223:CDS |
GTACCGCACCATCTCATAGT+TGG | 0.509024 | 3.4:-95155955 | None:intergenic |
TCTAAATGCTAAGAATCATA+CGG | 0.510015 | 3.4:+95159561 | MS.gene031223:CDS |
CGTGAGTTGTTCACTCGTGA+AGG | 0.516158 | 3.4:+95158167 | MS.gene031223:CDS |
AATAGAGTACATGCATTCCA+AGG | 0.528223 | 3.4:+95156338 | MS.gene031223:CDS |
GCATCCACAACTATTGTATG+AGG | 0.532224 | 3.4:+95155797 | MS.gene031223:CDS |
GCAAGTTGCAATACTCACTT+AGG | 0.533425 | 3.4:+95157425 | MS.gene031223:CDS |
AACATGGAGTGGGTCGTTGG+CGG | 0.534619 | 3.4:+95155133 | None:intergenic |
ACCTAGGTTTGAAGTTCCTG+TGG | 0.540684 | 3.4:-95159866 | None:intergenic |
TATTAGGAGAAAATCAAGTC+AGG | 0.540941 | 3.4:+95156404 | MS.gene031223:CDS |
TTGGCCTCATACAATAGTTG+TGG | 0.548570 | 3.4:-95155801 | None:intergenic |
CAATGATCCGTCCACTTCAT+CGG | 0.549710 | 3.4:+95159798 | MS.gene031223:CDS |
TTATGTACTTCTTAAGAGGA+AGG | 0.553282 | 3.4:+95157576 | MS.gene031223:CDS |
CTTTCAGACCCTGCCAAGGA+AGG | 0.558293 | 3.4:-95157725 | None:intergenic |
ATGAGATGGTGCGGTACTGA+TGG | 0.560221 | 3.4:+95155961 | MS.gene031223:CDS |
AACAACATGGAGTGGGTCGT+TGG | 0.562685 | 3.4:+95155130 | None:intergenic |
TTTGATGTTAGCAGACCAGA+TGG | 0.566646 | 3.4:+95156074 | MS.gene031223:CDS |
TGTAGGAGAAGAAGAGAACA+AGG | 0.572961 | 3.4:+95155775 | MS.gene031223:intron |
CTAAATGCTAAGAATCATAC+GGG | 0.574445 | 3.4:+95159562 | MS.gene031223:CDS |
GAATAAAAGTTTAACAGGGA+CGG | 0.577039 | 3.4:+95157394 | MS.gene031223:CDS |
TTTGGGCAAAGCCGATGAAG+TGG | 0.584387 | 3.4:-95159809 | None:intergenic |
TCTAAGCCTGAAAGGCCCAC+AGG | 0.585651 | 3.4:+95159850 | MS.gene031223:CDS |
GCACTAGGTACGGCATCTGA+AGG | 0.595661 | 3.4:-95158956 | None:intergenic |
TATTCCCAAATACACGACCT+AGG | 0.597805 | 3.4:-95159882 | None:intergenic |
AAAGTAAGACGCAAACTCCA+CGG | 0.599632 | 3.4:-95158081 | None:intergenic |
CATCCGCTAACAACATGGAG+TGG | 0.601509 | 3.4:+95155122 | None:intergenic |
AAGTAAGACGCAAACTCCAC+GGG | 0.604948 | 3.4:-95158080 | None:intergenic |
CCTAGGTTTGAAGTTCCTGT+GGG | 0.606084 | 3.4:-95159865 | None:intergenic |
ACTAGGAACAGCACTAGGTA+CGG | 0.607129 | 3.4:-95158966 | None:intergenic |
ACCACTGGTTGTAGACTGCT+AGG | 0.607910 | 3.4:-95158995 | None:intergenic |
ATCAGCAGACGCAACAGACA+AGG | 0.613053 | 3.4:+95158773 | MS.gene031223:CDS |
ATCCGCTAACAACATGGAGT+GGG | 0.614583 | 3.4:+95155123 | None:intergenic |
TGGATCTTGATCAAATGTCA+AGG | 0.615184 | 3.4:-95158117 | None:intergenic |
GTGGTATTCCAACTATGAGA+TGG | 0.615515 | 3.4:+95155947 | MS.gene031223:CDS |
AGACTGCTAGGCACAGCACT+AGG | 0.616647 | 3.4:-95158983 | None:intergenic |
AAGGAGACAAAAGCAATCAT+CGG | 0.624317 | 3.4:+95158792 | MS.gene031223:CDS |
ATTGGTCGCAAAATCGGAAG+CGG | 0.626522 | 3.4:+95155166 | MS.gene031223:CDS |
CTCAGAGGTGTCCATATCAG+AGG | 0.626948 | 3.4:-95155305 | None:intergenic |
GGCAAAGCCGATGAAGTGGA+CGG | 0.627991 | 3.4:-95159805 | None:intergenic |
AAAATGTCTCTAAGCCTGAA+AGG | 0.629959 | 3.4:+95159842 | MS.gene031223:CDS |
CCCACAGGAACTTCAAACCT+AGG | 0.637853 | 3.4:+95159865 | MS.gene031223:CDS |
AAATTATACAGTCTTCTCCA+AGG | 0.638640 | 3.4:+95155822 | MS.gene031223:CDS |
GCCTAGCAGTCTACAACCAG+TGG | 0.640292 | 3.4:+95158994 | MS.gene031223:CDS |
ACAGCTTTCAGACCCTGCCA+AGG | 0.644712 | 3.4:-95157729 | None:intergenic |
ATTGAAAATGTATACCTCAG+TGG | 0.646544 | 3.4:-95157802 | None:intergenic |
TCTTCTGGGACGTAGTCTGG+AGG | 0.649427 | 3.4:+95156008 | MS.gene031223:CDS |
TCTGAAAGCTGTCACCAAAG+AGG | 0.650261 | 3.4:+95157740 | MS.gene031223:CDS |
ACAGCACTAGGAACAGCACT+AGG | 0.656993 | 3.4:-95158971 | None:intergenic |
ATAGAGTACATGCATTCCAA+GGG | 0.660373 | 3.4:+95156339 | MS.gene031223:CDS |
GCTTTGCGAATCATATCCCG+TGG | 0.663642 | 3.4:+95158064 | MS.gene031223:CDS |
CTCTGATATGGACACCTCTG+AGG | 0.669495 | 3.4:+95155306 | MS.gene031223:CDS |
CAATAGACTCCAAATCATCA+CGG | 0.670210 | 3.4:-95157544 | None:intergenic |
ATTCCAACTATGAGATGGTG+CGG | 0.673968 | 3.4:+95155952 | MS.gene031223:CDS |
GAGAGAATAAAAGTTTAACA+GGG | 0.702224 | 3.4:+95157390 | MS.gene031223:intron |
TTTGACGGCAACGACCTCAG+AGG | 0.711927 | 3.4:-95155320 | None:intergenic |
GAAGTTATCAACTTCCACTG+AGG | 0.761442 | 3.4:+95157788 | MS.gene031223:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GAAAAATAATAATAATAACA+AGG | - | chr3.4:95159307-95159326 | None:intergenic | 10.0% |
!!! | ACATTTTGAATTTTAAAAAA+TGG | + | chr3.4:95157630-95157649 | MS.gene031223:intron | 10.0% |
!!! | ATATTTCTAATCTTTTATTA+TGG | + | chr3.4:95156644-95156663 | MS.gene031223:intron | 10.0% |
!!! | TATTATTATTATTTTTCACT+TGG | + | chr3.4:95159310-95159329 | MS.gene031223:intron | 10.0% |
!! | AAAAAAATGTCTAAATTTGA+TGG | + | chr3.4:95157000-95157019 | MS.gene031223:intron | 15.0% |
!! | AAATAAACTTCTTATTACAT+CGG | - | chr3.4:95158692-95158711 | None:intergenic | 15.0% |
!! | TGATATTAATTATTCTTCAT+TGG | + | chr3.4:95156834-95156853 | MS.gene031223:intron | 15.0% |
!!! | ATTCTTTTTAGGTAAATTTA+GGG | + | chr3.4:95157675-95157694 | MS.gene031223:intron | 15.0% |
!!! | TAAACAAATCAAGTATTTTT+AGG | - | chr3.4:95156705-95156724 | None:intergenic | 15.0% |
!!! | TAGGTTTATATTATTGATTT+CGG | + | chr3.4:95156544-95156563 | MS.gene031223:intron | 15.0% |
!!! | TGTTTTGATTTTTTTTTACT+TGG | + | chr3.4:95159730-95159749 | MS.gene031223:intron | 15.0% |
!! | AAAATTAAGAAGAAATCCAA+TGG | - | chr3.4:95159622-95159641 | None:intergenic | 20.0% |
!! | AACAACAAAATATACCTATA+AGG | - | chr3.4:95156613-95156632 | None:intergenic | 20.0% |
!! | AATAAACTTCTTATTACATC+GGG | - | chr3.4:95158691-95158710 | None:intergenic | 20.0% |
!! | AATAATAACAAGGAATTTGT+TGG | - | chr3.4:95159297-95159316 | None:intergenic | 20.0% |
!! | AATCAGGAAAGTTTAATAAT+CGG | - | chr3.4:95158898-95158917 | None:intergenic | 20.0% |
!! | ATCATAAAATGTTAGATAGT+TGG | - | chr3.4:95158481-95158500 | None:intergenic | 20.0% |
!! | ATGAAACATAAAAGGAATTA+TGG | - | chr3.4:95156487-95156506 | None:intergenic | 20.0% |
!! | CAAAATAGAATGAAATTTGT+GGG | - | chr3.4:95157499-95157518 | None:intergenic | 20.0% |
!! | GAAATTAAAAACTAGATTGA+GGG | - | chr3.4:95157851-95157870 | None:intergenic | 20.0% |
!! | GATGTAATAAGAAGTTTATT+TGG | + | chr3.4:95158691-95158710 | MS.gene031223:intron | 20.0% |
!! | GTAAGAAAATTACAATGAAT+GGG | - | chr3.4:95157612-95157631 | None:intergenic | 20.0% |
!! | TAAGACATATGAAACATAAA+AGG | - | chr3.4:95156495-95156514 | None:intergenic | 20.0% |
!! | TAGACCATAAAAATGTTTAA+AGG | - | chr3.4:95158836-95158855 | None:intergenic | 20.0% |
!! | TGAAACATAAAAGGAATTAT+GGG | - | chr3.4:95156486-95156505 | None:intergenic | 20.0% |
!! | TGTAAGAAAATTACAATGAA+TGG | - | chr3.4:95157613-95157632 | None:intergenic | 20.0% |
!! | TTTAAGTAATTACTGTCAAT+TGG | + | chr3.4:95158220-95158239 | MS.gene031223:intron | 20.0% |
!!! | AACAATATTAAGAGCTTTTA+AGG | + | chr3.4:95157926-95157945 | MS.gene031223:intron | 20.0% |
!!! | AACATTAAAGTATTAACGTA+AGG | - | chr3.4:95157077-95157096 | None:intergenic | 20.0% |
!!! | AAGTTATAAAAGAAGCATTT+GGG | + | chr3.4:95155852-95155871 | MS.gene031223:intron | 20.0% |
!!! | AATTTTTGGATATAGAGTAA+TGG | - | chr3.4:95158519-95158538 | None:intergenic | 20.0% |
!!! | ACATTAAAGTATTAACGTAA+GGG | - | chr3.4:95157076-95157095 | None:intergenic | 20.0% |
!!! | ATATCCAAAAATTCATGTTT+TGG | + | chr3.4:95158526-95158545 | MS.gene031223:intron | 20.0% |
!!! | ATGATAATTTGCTTATTAGT+TGG | + | chr3.4:95158274-95158293 | MS.gene031223:intron | 20.0% |
!!! | ATGATATTAAATATGGCTTT+TGG | + | chr3.4:95156159-95156178 | MS.gene031223:intron | 20.0% |
!!! | ATTTCCAAAACATGAATTTT+TGG | - | chr3.4:95158533-95158552 | None:intergenic | 20.0% |
!!! | CATTCTTTTTAGGTAAATTT+AGG | + | chr3.4:95157674-95157693 | MS.gene031223:intron | 20.0% |
!!! | TAAGTTATAAAAGAAGCATT+TGG | + | chr3.4:95155851-95155870 | MS.gene031223:intron | 20.0% |
!!! | TAGGTATTTTTTGCTTATAA+TGG | + | chr3.4:95157127-95157146 | MS.gene031223:intron | 20.0% |
!!! | TCATGTTTTTACTTGTTATA+AGG | + | chr3.4:95156668-95156687 | MS.gene031223:intron | 20.0% |
!!! | TCATTTGGTGAAATTTATAT+AGG | + | chr3.4:95155190-95155209 | MS.gene031223:intron | 20.0% |
!!! | TGAAAGTGTGTAAAAAATAA+AGG | - | chr3.4:95155685-95155704 | None:intergenic | 20.0% |
!!! | TGAACCTTTAAACATTTTTA+TGG | + | chr3.4:95158829-95158848 | MS.gene031223:intron | 20.0% |
!!! | TTCCTTGATGATATTAAATA+TGG | + | chr3.4:95156152-95156171 | MS.gene031223:intron | 20.0% |
! | AAAACTGCTACTATATTGAT+AGG | - | chr3.4:95156206-95156225 | None:intergenic | 25.0% |
! | AAGAAAGGTTAAATACTTAG+TGG | - | chr3.4:95158342-95158361 | None:intergenic | 25.0% |
! | AGAGAGAATAAAAGTTTAAC+AGG | + | chr3.4:95157389-95157408 | MS.gene031223:intron | 25.0% |
! | AGCATTTAGATTCTTTAGAT+TGG | - | chr3.4:95159551-95159570 | None:intergenic | 25.0% |
! | AGCCATATTTAATATCATCA+AGG | - | chr3.4:95156157-95156176 | None:intergenic | 25.0% |
! | AGTTTAACTAGTCAAGTTAA+TGG | + | chr3.4:95157334-95157353 | MS.gene031223:intron | 25.0% |
! | ATAAACTTCTTATTACATCG+GGG | - | chr3.4:95158690-95158709 | None:intergenic | 25.0% |
! | ATCAGGAAAGTTTAATAATC+GGG | - | chr3.4:95158897-95158916 | None:intergenic | 25.0% |
! | CACAAAATTTGCATAACTAA+AGG | - | chr3.4:95158371-95158390 | None:intergenic | 25.0% |
! | CACTTCAATATACATTATCT+AGG | - | chr3.4:95159113-95159132 | None:intergenic | 25.0% |
! | CATTGGATAACAGTTAATAA+AGG | + | chr3.4:95156851-95156870 | MS.gene031223:intron | 25.0% |
! | CCAAAATAGAATGAAATTTG+TGG | - | chr3.4:95157500-95157519 | None:intergenic | 25.0% |
! | GAGAGAATAAAAGTTTAACA+GGG | + | chr3.4:95157390-95157409 | MS.gene031223:intron | 25.0% |
! | GGAAATTAAAAACTAGATTG+AGG | - | chr3.4:95157852-95157871 | None:intergenic | 25.0% |
! | GTTAATACTTTAATGTTGTG+AGG | + | chr3.4:95157080-95157099 | MS.gene031223:intron | 25.0% |
! | TAAATTCTAACTCATTCTAC+TGG | - | chr3.4:95159161-95159180 | None:intergenic | 25.0% |
! | TACAAAATGTTGATCTCATT+AGG | - | chr3.4:95155449-95155468 | None:intergenic | 25.0% |
! | TCTAAATGCTAAGAATCATA+CGG | + | chr3.4:95159561-95159580 | MS.gene031223:CDS | 25.0% |
! | TCTAAATTCATTATCTTCAC+TGG | + | chr3.4:95156435-95156454 | MS.gene031223:intron | 25.0% |
! | TTATCAAGGTCAAAACATTA+GGG | - | chr3.4:95157361-95157380 | None:intergenic | 25.0% |
! | TTTAGATTCTTTAGATTGGA+TGG | - | chr3.4:95159547-95159566 | None:intergenic | 25.0% |
! | TTTATAACTTACTTTCTCCT+TGG | - | chr3.4:95155842-95155861 | None:intergenic | 25.0% |
! | TTTATCAAGGTCAAAACATT+AGG | - | chr3.4:95157362-95157381 | None:intergenic | 25.0% |
!! | AAAGAAACAAACCATTTTGA+CGG | - | chr3.4:95155338-95155357 | None:intergenic | 25.0% |
!! | AGATCATAATATTCTGGTTA+TGG | + | chr3.4:95155984-95156003 | MS.gene031223:CDS | 25.0% |
!! | AGCTTGATAACATGAAATTA+GGG | + | chr3.4:95155580-95155599 | MS.gene031223:intron | 25.0% |
!! | ATCAATTGCACATTCTTTTT+AGG | + | chr3.4:95157664-95157683 | MS.gene031223:intron | 25.0% |
!! | ATCTCAAATAATTCCTTTTC+CGG | + | chr3.4:95157261-95157280 | MS.gene031223:intron | 25.0% |
!! | ATGAGATCAACATTTTGTAT+CGG | + | chr3.4:95155450-95155469 | MS.gene031223:intron | 25.0% |
!! | CCACAAATTTCATTCTATTT+TGG | + | chr3.4:95157497-95157516 | MS.gene031223:intron | 25.0% |
!! | TAGCTTGATAACATGAAATT+AGG | + | chr3.4:95155579-95155598 | MS.gene031223:intron | 25.0% |
!! | TCTATTTACAAAAGTTCTAG+AGG | + | chr3.4:95156729-95156748 | MS.gene031223:intron | 25.0% |
!! | TGAAATTAGGGATATGTTTT+TGG | + | chr3.4:95155592-95155611 | MS.gene031223:intron | 25.0% |
!! | TTTTAATGCTCATTGCAAAA+CGG | + | chr3.4:95159189-95159208 | MS.gene031223:intron | 25.0% |
!!! | ATTATTTTTCACTTGGAAGT+TGG | + | chr3.4:95159317-95159336 | MS.gene031223:intron | 25.0% |
!!! | CTGCAATTTGTTACATTTAT+AGG | + | chr3.4:95156525-95156544 | MS.gene031223:intron | 25.0% |
!!! | GCTACATTTCTTTATTTTGT+AGG | + | chr3.4:95155758-95155777 | MS.gene031223:intron | 25.0% |
!!! | TATATTATTGATTTCGGACT+AGG | + | chr3.4:95156550-95156569 | MS.gene031223:CDS | 25.0% |
!!! | TGAATTATTGATTCCTGAAA+AGG | - | chr3.4:95159458-95159477 | None:intergenic | 25.0% |
!!! | TGCTTGCTTTATTTTTCAAT+TGG | + | chr3.4:95156120-95156139 | MS.gene031223:intron | 25.0% |
AAACCAGATAACTTCCTAAT+GGG | + | chr3.4:95156381-95156400 | MS.gene031223:CDS | 30.0% | |
AAATTATACAGTCTTCTCCA+AGG | + | chr3.4:95155822-95155841 | MS.gene031223:CDS | 30.0% | |
AACGAATTCTGTTCAATTGT+GGG | + | chr3.4:95159079-95159098 | MS.gene031223:intron | 30.0% | |
AACTAAAGGAGAAAGAAGAA+AGG | - | chr3.4:95158357-95158376 | None:intergenic | 30.0% | |
AATCAACTATACTGCAAACT+TGG | - | chr3.4:95159389-95159408 | None:intergenic | 30.0% | |
ACATAAAAGGAATTATGGGA+CGG | - | chr3.4:95156482-95156501 | None:intergenic | 30.0% | |
ACTATGACAATTTATTCGAC+TGG | + | chr3.4:95158737-95158756 | MS.gene031223:CDS | 30.0% | |
AGATTACACAGATTACAAGT+TGG | - | chr3.4:95157245-95157264 | None:intergenic | 30.0% | |
ATGTACTAGTAACCAATCTT+AGG | + | chr3.4:95158617-95158636 | MS.gene031223:intron | 30.0% | |
ATTAAGACATGTACATCATC+AGG | - | chr3.4:95159433-95159452 | None:intergenic | 30.0% | |
ATTCTTCATTTGTGTTTGCT+TGG | + | chr3.4:95158572-95158591 | MS.gene031223:intron | 30.0% | |
ATTGAAAATGTATACCTCAG+TGG | - | chr3.4:95157805-95157824 | None:intergenic | 30.0% | |
ATTTGGATCTCATATGGAAA+AGG | + | chr3.4:95155878-95155897 | MS.gene031223:intron | 30.0% | |
CATGTCTTAGCAATTAATAG+AGG | - | chr3.4:95159655-95159674 | None:intergenic | 30.0% | |
CTAAATGCTAAGAATCATAC+GGG | + | chr3.4:95159562-95159581 | MS.gene031223:CDS | 30.0% | |
CTCTATTAATTGCTAAGACA+TGG | + | chr3.4:95159653-95159672 | MS.gene031223:intron | 30.0% | |
CTCTCTGTATAAGTTTATCA+AGG | - | chr3.4:95157375-95157394 | None:intergenic | 30.0% | |
CTTCTTATGTTCATACAATG+AGG | + | chr3.4:95159046-95159065 | MS.gene031223:intron | 30.0% | |
GAAGATAAATACAACACAAG+AGG | - | chr3.4:95158665-95158684 | None:intergenic | 30.0% | |
GAATAAAAGTTTAACAGGGA+CGG | + | chr3.4:95157394-95157413 | MS.gene031223:CDS | 30.0% | |
GCAATTAATAGAGGATATAG+AGG | - | chr3.4:95159646-95159665 | None:intergenic | 30.0% | |
GTGATGAATGATAAAGAGAT+GGG | - | chr3.4:95155380-95155399 | None:intergenic | 30.0% | |
TAAACTTATACTTGCTTGCT+AGG | + | chr3.4:95155647-95155666 | MS.gene031223:intron | 30.0% | |
TAAACTTCTTATTACATCGG+GGG | - | chr3.4:95158689-95158708 | None:intergenic | 30.0% | |
TATTAATTGCTAAGACATGG+TGG | + | chr3.4:95159656-95159675 | MS.gene031223:intron | 30.0% | |
TATTAGGAGAAAATCAAGTC+AGG | + | chr3.4:95156404-95156423 | MS.gene031223:CDS | 30.0% | |
TGATCTATTCCTTAGATTAC+CGG | - | chr3.4:95155420-95155439 | None:intergenic | 30.0% | |
TGATGGAGATCATAATATTC+TGG | + | chr3.4:95155978-95155997 | MS.gene031223:CDS | 30.0% | |
TGGTAAATATCTGTCAATCT+TGG | - | chr3.4:95159277-95159296 | None:intergenic | 30.0% | |
TGTACTAGTAACCAATCTTA+GGG | + | chr3.4:95158618-95158637 | MS.gene031223:intron | 30.0% | |
TGTGTGACATTAAAACAATC+TGG | - | chr3.4:95156770-95156789 | None:intergenic | 30.0% | |
TTACCAAAAACTTCTGTAAC+TGG | + | chr3.4:95156910-95156929 | MS.gene031223:intron | 30.0% | |
TTACTGTCAATTGGACATAT+AGG | + | chr3.4:95158229-95158248 | MS.gene031223:intron | 30.0% | |
TTATGTACTTCTTAAGAGGA+AGG | + | chr3.4:95157576-95157595 | MS.gene031223:CDS | 30.0% | |
TTGGAGAAGACTGTATAATT+TGG | - | chr3.4:95155823-95155842 | None:intergenic | 30.0% | |
TTTGATCAAGATCCAGATTA+TGG | + | chr3.4:95158125-95158144 | MS.gene031223:CDS | 30.0% | |
! | AAATTTAGGGCTTGACTATA+TGG | + | chr3.4:95157688-95157707 | MS.gene031223:intron | 30.0% |
! | ATAACTTCCTAATGGGTATT+AGG | + | chr3.4:95156388-95156407 | MS.gene031223:CDS | 30.0% |
! | ATTTTCTCCTAATACCCATT+AGG | - | chr3.4:95156398-95156417 | None:intergenic | 30.0% |
! | CATGTCTTAATTTCCTTTTC+AGG | + | chr3.4:95159442-95159461 | MS.gene031223:intron | 30.0% |
! | CTTGTCATATTTTTCCTCTT+TGG | - | chr3.4:95157757-95157776 | None:intergenic | 30.0% |
! | GATCATTGCCTATTTTCTTA+TGG | + | chr3.4:95156936-95156955 | MS.gene031223:intron | 30.0% |
! | TAAAACAATCTGGTTTCATG+TGG | - | chr3.4:95156760-95156779 | None:intergenic | 30.0% |
! | TGAGATCAACATTTTGTATC+GGG | + | chr3.4:95155451-95155470 | MS.gene031223:intron | 30.0% |
! | TGCTTATAATGGAGTTTAGA+GGG | + | chr3.4:95157138-95157157 | MS.gene031223:intron | 30.0% |
! | TTCCTCTTAAGAAGTACATA+AGG | - | chr3.4:95157577-95157596 | None:intergenic | 30.0% |
! | TTGCTTATAATGGAGTTTAG+AGG | + | chr3.4:95157137-95157156 | MS.gene031223:intron | 30.0% |
! | TTTAAGATTGGTCGCAAAAT+CGG | + | chr3.4:95155160-95155179 | MS.gene031223:CDS | 30.0% |
!! | AAGAAGCATTTGGGTATATT+TGG | + | chr3.4:95155861-95155880 | MS.gene031223:intron | 30.0% |
!! | AATAGTCATTGATTCAAGTG+AGG | - | chr3.4:95158931-95158950 | None:intergenic | 30.0% |
!! | ACATTTTCTGCAGTTGATTT+GGG | - | chr3.4:95159829-95159848 | None:intergenic | 30.0% |
!! | CTTTTAAGGATTGCTATTAC+TGG | + | chr3.4:95157940-95157959 | MS.gene031223:intron | 30.0% |
!!! | AGTTTTGTTACAGTAACTTG+AGG | - | chr3.4:95159481-95159500 | None:intergenic | 30.0% |
!!! | GATTGTTTTAATGTCACACA+TGG | + | chr3.4:95156770-95156789 | MS.gene031223:intron | 30.0% |
AAAAACTAGATTGAGGGTCA+GGG | - | chr3.4:95157845-95157864 | None:intergenic | 35.0% | |
AAAATGTCTCTAAGCCTGAA+AGG | + | chr3.4:95159842-95159861 | MS.gene031223:CDS | 35.0% | |
AAGGAGACAAAAGCAATCAT+CGG | + | chr3.4:95158792-95158811 | MS.gene031223:CDS | 35.0% | |
AATAGAGTACATGCATTCCA+AGG | + | chr3.4:95156338-95156357 | MS.gene031223:CDS | 35.0% | |
AATCAGAACTCAGAAAAGTC+CGG | - | chr3.4:95157283-95157302 | None:intergenic | 35.0% | |
AATCCAGCTGCTTGAAATAT+GGG | - | chr3.4:95159911-95159930 | None:intergenic | 35.0% | |
ACATACTGCATACAGTACAT+AGG | + | chr3.4:95158412-95158431 | MS.gene031223:intron | 35.0% | |
ACCATAATAAGTGTGGAAGT+AGG | + | chr3.4:95157108-95157127 | MS.gene031223:intron | 35.0% | |
ACCTACTTCCACACTTATTA+TGG | - | chr3.4:95157112-95157131 | None:intergenic | 35.0% | |
AGTTTAAACCCTGATCATCA+AGG | + | chr3.4:95155529-95155548 | MS.gene031223:intron | 35.0% | |
ATACCCATTAGGAAGTTATC+TGG | - | chr3.4:95156387-95156406 | None:intergenic | 35.0% | |
ATAGAGTACATGCATTCCAA+GGG | + | chr3.4:95156339-95156358 | MS.gene031223:CDS | 35.0% | |
ATAGTTCCAGGTATTCATGT+AGG | - | chr3.4:95157900-95157919 | None:intergenic | 35.0% | |
ATCGAAAAGTTACCTCTTGT+AGG | + | chr3.4:95156228-95156247 | MS.gene031223:intron | 35.0% | |
ATTGTTTCGTCAATAGTTCC+AGG | - | chr3.4:95157912-95157931 | None:intergenic | 35.0% | |
CAAACCAGATAACTTCCTAA+TGG | + | chr3.4:95156380-95156399 | MS.gene031223:CDS | 35.0% | |
CAAGCAAGCATATTCCTTAT+AGG | + | chr3.4:95156596-95156615 | MS.gene031223:CDS | 35.0% | |
CAAGGATGCCATAAGAAAAT+AGG | - | chr3.4:95156947-95156966 | None:intergenic | 35.0% | |
CAATAGACTCCAAATCATCA+CGG | - | chr3.4:95157547-95157566 | None:intergenic | 35.0% | |
CATAAAAGGAATTATGGGAC+GGG | - | chr3.4:95156481-95156500 | None:intergenic | 35.0% | |
CGTGATGAATGATAAAGAGA+TGG | - | chr3.4:95155381-95155400 | None:intergenic | 35.0% | |
CTCAACAACTATTGTGTACA+AGG | + | chr3.4:95155715-95155734 | MS.gene031223:intron | 35.0% | |
CTCATTGCAAAACGGAAAAA+AGG | + | chr3.4:95159197-95159216 | MS.gene031223:intron | 35.0% | |
CTTCAATGATAAAACCTCTC+AGG | - | chr3.4:95157994-95158013 | None:intergenic | 35.0% | |
GAACGAATTCTGTTCAATTG+TGG | + | chr3.4:95159078-95159097 | MS.gene031223:intron | 35.0% | |
GGGTATATTTGGATCTCATA+TGG | + | chr3.4:95155872-95155891 | MS.gene031223:intron | 35.0% | |
GTCCTTATGTACTTCTTAAG+AGG | + | chr3.4:95157572-95157591 | MS.gene031223:CDS | 35.0% | |
GTCTCTATGTAAAAATCCCT+TGG | - | chr3.4:95156358-95156377 | None:intergenic | 35.0% | |
GTGAGGAAGAGAATAAAATC+AGG | - | chr3.4:95158914-95158933 | None:intergenic | 35.0% | |
GTGCTTAAGTAGAGATATTC+TGG | - | chr3.4:95158394-95158413 | None:intergenic | 35.0% | |
TAAAAACTAGATTGAGGGTC+AGG | - | chr3.4:95157846-95157865 | None:intergenic | 35.0% | |
TACAAGCTTAGCTGTAAAGA+AGG | - | chr3.4:95157475-95157494 | None:intergenic | 35.0% | |
TCATGTAGGTCAAAGTATGA+GGG | - | chr3.4:95157886-95157905 | None:intergenic | 35.0% | |
TGATGATCAGGGTTTAAACT+CGG | - | chr3.4:95155529-95155548 | None:intergenic | 35.0% | |
TGCAATACTCACTTAGGAAT+CGG | + | chr3.4:95157431-95157450 | MS.gene031223:CDS | 35.0% | |
TGCATTTACTGGAATGCATA+TGG | + | chr3.4:95158859-95158878 | MS.gene031223:intron | 35.0% | |
TGGATCTTGATCAAATGTCA+AGG | - | chr3.4:95158120-95158139 | None:intergenic | 35.0% | |
TTATAACTGCACAGTAGTAC+TGG | - | chr3.4:95156977-95156996 | None:intergenic | 35.0% | |
TTCATGTAGGTCAAAGTATG+AGG | - | chr3.4:95157887-95157906 | None:intergenic | 35.0% | |
TTCTTTAGATTGGATGGCTT+AGG | - | chr3.4:95159541-95159560 | None:intergenic | 35.0% | |
TTTGGCTGAATTTAATGAGC+AGG | + | chr3.4:95158709-95158728 | MS.gene031223:intron | 35.0% | |
! | ACACCAGTTACAGAAGTTTT+TGG | - | chr3.4:95156916-95156935 | None:intergenic | 35.0% |
! | ACATTTTGTATCGGGTTTGA+TGG | + | chr3.4:95155459-95155478 | MS.gene031223:intron | 35.0% |
! | AGGAATATGCTTGCTTGTTT+TGG | - | chr3.4:95156593-95156612 | None:intergenic | 35.0% |
! | ATTCTGGTTATGGATCTTCT+GGG | + | chr3.4:95155994-95156013 | MS.gene031223:CDS | 35.0% |
! | CATTTTGTATCGGGTTTGAT+GGG | + | chr3.4:95155460-95155479 | MS.gene031223:intron | 35.0% |
! | CTTATAATGGAGTTTAGAGG+GGG | + | chr3.4:95157140-95157159 | MS.gene031223:intron | 35.0% |
! | CTTCTGAGAACAAGGAATAT+GGG | - | chr3.4:95158045-95158064 | None:intergenic | 35.0% |
! | GACATTTTCTGCAGTTGATT+TGG | - | chr3.4:95159830-95159849 | None:intergenic | 35.0% |
! | GCTTATAATGGAGTTTAGAG+GGG | + | chr3.4:95157139-95157158 | MS.gene031223:intron | 35.0% |
! | GTCAGGGGTTAATCATTTTA+TGG | - | chr3.4:95157829-95157848 | None:intergenic | 35.0% |
! | TATTCTGGTTATGGATCTTC+TGG | + | chr3.4:95155993-95156012 | MS.gene031223:CDS | 35.0% |
! | TTCTGATTCGTCTTACACTT+CGG | + | chr3.4:95155917-95155936 | MS.gene031223:intron | 35.0% |
!! | ACGTTAATTTGTGAATGCTC+CGG | + | chr3.4:95155398-95155417 | MS.gene031223:intron | 35.0% |
!! | CGCTTTAAGAATCCATAATC+TGG | - | chr3.4:95158140-95158159 | None:intergenic | 35.0% |
!! | GGAATATGCTTGCTTGTTTT+GGG | - | chr3.4:95156592-95156611 | None:intergenic | 35.0% |
!! | TTTTGCATTTTAGCCTTCCT+TGG | + | chr3.4:95157712-95157731 | MS.gene031223:intron | 35.0% |
!!! | GAATATGCTTGCTTGTTTTG+GGG | - | chr3.4:95156591-95156610 | None:intergenic | 35.0% |
!!! | TGTTTTAGCCTGTTGAATGT+AGG | + | chr3.4:95158298-95158317 | MS.gene031223:intron | 35.0% |
AAAACTAGATTGAGGGTCAG+GGG | - | chr3.4:95157844-95157863 | None:intergenic | 40.0% | |
AAAATCGGAAGCGGTTCATT+TGG | + | chr3.4:95155175-95155194 | MS.gene031223:intron | 40.0% | |
AAAGTAAGACGCAAACTCCA+CGG | - | chr3.4:95158084-95158103 | None:intergenic | 40.0% | |
AACTCAGAAAAGTCCGGAAA+AGG | - | chr3.4:95157277-95157296 | None:intergenic | 40.0% | |
AGAAGAAATCCAATGGCAGT+CGG | - | chr3.4:95159615-95159634 | None:intergenic | 40.0% | |
AGCTAGTACGAATCAGCATT+AGG | - | chr3.4:95155741-95155760 | None:intergenic | 40.0% | |
ATGAATCAGTGGTTACCATC+TGG | - | chr3.4:95156092-95156111 | None:intergenic | 40.0% | |
ATTCCAACTATGAGATGGTG+CGG | + | chr3.4:95155952-95155971 | MS.gene031223:CDS | 40.0% | |
CAAACCTAGGTCGTGTATTT+GGG | + | chr3.4:95159878-95159897 | MS.gene031223:CDS | 40.0% | |
CAATGATAAAACCTCTCAGG+AGG | - | chr3.4:95157991-95158010 | None:intergenic | 40.0% | |
CACATTTGGACGATCAAGAT+TGG | - | chr3.4:95159509-95159528 | None:intergenic | 40.0% | |
CTCAACTGATTAGGGTTGAA+AGG | + | chr3.4:95155492-95155511 | MS.gene031223:intron | 40.0% | |
CTTTGACCTACATGAATACC+TGG | + | chr3.4:95157891-95157910 | MS.gene031223:intron | 40.0% | |
GAAGAAATTCGCCGTAAAGA+AGG | - | chr3.4:95159934-95159953 | None:intergenic | 40.0% | |
GAAGTTATCAACTTCCACTG+AGG | + | chr3.4:95157788-95157807 | MS.gene031223:CDS | 40.0% | |
GAATCCAGCTGCTTGAAATA+TGG | - | chr3.4:95159912-95159931 | None:intergenic | 40.0% | |
GCAAGTTGCAATACTCACTT+AGG | + | chr3.4:95157425-95157444 | MS.gene031223:CDS | 40.0% | |
GCAATCCAGATATGAATCAG+TGG | - | chr3.4:95156103-95156122 | None:intergenic | 40.0% | |
GCATCCACAACTATTGTATG+AGG | + | chr3.4:95155797-95155816 | MS.gene031223:CDS | 40.0% | |
GGAGATGACCATAATAAGTG+TGG | + | chr3.4:95157101-95157120 | MS.gene031223:intron | 40.0% | |
GGTCTTTCTTAGTTGAACAG+CGG | - | chr3.4:95159368-95159387 | None:intergenic | 40.0% | |
GTGGTATTCCAACTATGAGA+TGG | + | chr3.4:95155947-95155966 | MS.gene031223:CDS | 40.0% | |
GTGGTTGTGGAAAAACATAC+AGG | + | chr3.4:95159013-95159032 | MS.gene031223:CDS | 40.0% | |
TAATGCCTCCTACATTCAAC+AGG | - | chr3.4:95158309-95158328 | None:intergenic | 40.0% | |
TAATTTCTTCCGACTGCCAT+TGG | + | chr3.4:95159603-95159622 | MS.gene031223:intron | 40.0% | |
TACTCTATTCTCGAAAGCTG+TGG | - | chr3.4:95156327-95156346 | None:intergenic | 40.0% | |
TATTCCCAAATACACGACCT+AGG | - | chr3.4:95159885-95159904 | None:intergenic | 40.0% | |
TCAAACCTAGGTCGTGTATT+TGG | + | chr3.4:95159877-95159896 | MS.gene031223:CDS | 40.0% | |
TGTAGGAGAAGAAGAGAACA+AGG | + | chr3.4:95155775-95155794 | MS.gene031223:intron | 40.0% | |
TTAGGGTTGAAAGGAGTTAG+AGG | + | chr3.4:95155501-95155520 | MS.gene031223:intron | 40.0% | |
TTCACTTGGAAGTTGGAACT+TGG | + | chr3.4:95159324-95159343 | MS.gene031223:intron | 40.0% | |
TTGGCCTCATACAATAGTTG+TGG | - | chr3.4:95155804-95155823 | None:intergenic | 40.0% | |
TTGGGTAGCTCAACTGATTA+GGG | + | chr3.4:95155484-95155503 | MS.gene031223:intron | 40.0% | |
TTGTTCTCAAGACCACATGT+AGG | - | chr3.4:95158456-95158475 | None:intergenic | 40.0% | |
TTTAGCCTGTTGAATGTAGG+AGG | + | chr3.4:95158301-95158320 | MS.gene031223:intron | 40.0% | |
TTTGATGTTAGCAGACCAGA+TGG | + | chr3.4:95156074-95156093 | MS.gene031223:CDS | 40.0% | |
TTTGGGTAGCTCAACTGATT+AGG | + | chr3.4:95155483-95155502 | MS.gene031223:intron | 40.0% | |
! | AGTAGCTACCTTGATGATCA+GGG | - | chr3.4:95155540-95155559 | None:intergenic | 40.0% |
! | ATGGTCTAGCTTGCATTTAC+TGG | + | chr3.4:95158848-95158867 | MS.gene031223:intron | 40.0% |
! | CGTCTTACACTTCGGATTTT+AGG | + | chr3.4:95155925-95155944 | MS.gene031223:intron | 40.0% |
! | CGTGATGATTTGGAGTCTAT+TGG | + | chr3.4:95157545-95157564 | MS.gene031223:CDS | 40.0% |
! | CTTACACTTCGGATTTTAGG+TGG | + | chr3.4:95155928-95155947 | MS.gene031223:intron | 40.0% |
! | GCTTCTGAGAACAAGGAATA+TGG | - | chr3.4:95158046-95158065 | None:intergenic | 40.0% |
! | GTATGTTTTTCCACAACCAC+TGG | - | chr3.4:95159013-95159032 | None:intergenic | 40.0% |
! | GTTGCGTCTGCTGATATTTT+AGG | - | chr3.4:95158768-95158787 | None:intergenic | 40.0% |
! | GTTGGCGGAAAGTTTAAGAT+TGG | + | chr3.4:95155148-95155167 | MS.gene031223:CDS | 40.0% |
! | TAGGGTTTCAGAGTTGTTTC+TGG | + | chr3.4:95158636-95158655 | MS.gene031223:intron | 40.0% |
! | TAGTAGCTACCTTGATGATC+AGG | - | chr3.4:95155541-95155560 | None:intergenic | 40.0% |
! | TCGGACTAGGAAAAAGATAC+CGG | + | chr3.4:95156563-95156582 | MS.gene031223:CDS | 40.0% |
! | TTTGAGATGAGACCTACATG+TGG | + | chr3.4:95158441-95158460 | MS.gene031223:intron | 40.0% |
!! | AGTAGTACTGGTACACATCA+AGG | - | chr3.4:95156965-95156984 | None:intergenic | 40.0% |
!! | ATAGGAGCATTTCCTACAAG+AGG | - | chr3.4:95156243-95156262 | None:intergenic | 40.0% |
!! | CAACTCTGAAACCCTAAGAT+TGG | - | chr3.4:95158632-95158651 | None:intergenic | 40.0% |
!! | CGTCTGCTGATATTTTAGGA+TGG | - | chr3.4:95158764-95158783 | None:intergenic | 40.0% |
!! | GGTAACCACTGATTCATATC+TGG | + | chr3.4:95156095-95156114 | MS.gene031223:intron | 40.0% |
!!! | AGAGGGGGTATTTTGTGAAA+TGG | + | chr3.4:95157155-95157174 | MS.gene031223:intron | 40.0% |
AAGTAAGACGCAAACTCCAC+GGG | - | chr3.4:95158083-95158102 | None:intergenic | 45.0% | |
ACTAGGAACAGCACTAGGTA+CGG | - | chr3.4:95158969-95158988 | None:intergenic | 45.0% | |
ACTCCCATATTTCAAGCAGC+TGG | + | chr3.4:95159905-95159924 | MS.gene031223:CDS | 45.0% | |
AGGAAATGCTCCTATCCACA+GGG | + | chr3.4:95156248-95156267 | MS.gene031223:intron | 45.0% | |
AGTATGAGGGCGAGAAGAAA+AGG | - | chr3.4:95157873-95157892 | None:intergenic | 45.0% | |
ATAAAACCTCTCAGGAGGAG+GGG | - | chr3.4:95157986-95158005 | None:intergenic | 45.0% | |
ATTGGTCGCAAAATCGGAAG+CGG | + | chr3.4:95155166-95155185 | MS.gene031223:CDS | 45.0% | |
CAATGATCCGTCCACTTCAT+CGG | + | chr3.4:95159798-95159817 | MS.gene031223:CDS | 45.0% | |
CATTGAAAGTCCCTGTGGAT+AGG | - | chr3.4:95156261-95156280 | None:intergenic | 45.0% | |
GATAAAACCTCTCAGGAGGA+GGG | - | chr3.4:95157987-95158006 | None:intergenic | 45.0% | |
GCAGCTGGATTCCTTCTTTA+CGG | + | chr3.4:95159920-95159939 | MS.gene031223:CDS | 45.0% | |
GCTTTCATTGAAAGTCCCTG+TGG | - | chr3.4:95156266-95156285 | None:intergenic | 45.0% | |
GTGAATGCTCCGGTAATCTA+AGG | + | chr3.4:95155408-95155427 | MS.gene031223:intron | 45.0% | |
TAGGAAATGCTCCTATCCAC+AGG | + | chr3.4:95156247-95156266 | MS.gene031223:intron | 45.0% | |
TCTGAAAGCTGTCACCAAAG+AGG | + | chr3.4:95157740-95157759 | MS.gene031223:CDS | 45.0% | |
TGATAAAACCTCTCAGGAGG+AGG | - | chr3.4:95157988-95158007 | None:intergenic | 45.0% | |
! | ACCTAGGTTTGAAGTTCCTG+TGG | - | chr3.4:95159869-95159888 | None:intergenic | 45.0% |
! | AGGACCTTTTTGTCTTCTGC+GGG | + | chr3.4:95156028-95156047 | MS.gene031223:CDS | 45.0% |
! | CCTAGGTTTGAAGTTCCTGT+GGG | - | chr3.4:95159868-95159887 | None:intergenic | 45.0% |
! | CGGACTAGGAAAAAGATACC+GGG | + | chr3.4:95156564-95156583 | MS.gene031223:CDS | 45.0% |
! | GAGGACCTTTTTGTCTTCTG+CGG | + | chr3.4:95156027-95156046 | MS.gene031223:CDS | 45.0% |
! | GATGGACTCAAAGTGTCTAC+TGG | + | chr3.4:95157018-95157037 | MS.gene031223:intron | 45.0% |
! | GCTTTTTGCAGCCTCTGATA+TGG | + | chr3.4:95155294-95155313 | MS.gene031223:intron | 45.0% |
! | TCGCAAAGCTTCTGAGAACA+AGG | - | chr3.4:95158053-95158072 | None:intergenic | 45.0% |
!! | CATTTTAGCCTTCCTTGGCA+GGG | + | chr3.4:95157717-95157736 | MS.gene031223:intron | 45.0% |
!! | GTATCGGGTTTGATGGGTTT+GGG | + | chr3.4:95155466-95155485 | MS.gene031223:intron | 45.0% |
!! | TGTATCGGGTTTGATGGGTT+TGG | + | chr3.4:95155465-95155484 | MS.gene031223:intron | 45.0% |
ACAGCACTAGGAACAGCACT+AGG | - | chr3.4:95158974-95158993 | None:intergenic | 50.0% | |
ATCAGCAGACGCAACAGACA+AGG | + | chr3.4:95158773-95158792 | MS.gene031223:CDS | 50.0% | |
CAGTCTACAACCAGTGGTTG+TGG | + | chr3.4:95159000-95159019 | MS.gene031223:CDS | 50.0% | |
CCCACAGGAACTTCAAACCT+AGG | + | chr3.4:95159865-95159884 | MS.gene031223:CDS | 50.0% | |
CGTGAGTTGTTCACTCGTGA+AGG | + | chr3.4:95158167-95158186 | MS.gene031223:CDS | 50.0% | |
CTCTGATATGGACACCTCTG+AGG | + | chr3.4:95155306-95155325 | MS.gene031223:CDS | 50.0% | |
GCAAAGTCGCCGTGATGATT+TGG | + | chr3.4:95157535-95157554 | MS.gene031223:CDS | 50.0% | |
GCTTTGCGAATCATATCCCG+TGG | + | chr3.4:95158064-95158083 | MS.gene031223:CDS | 50.0% | |
GTACCGCACCATCTCATAGT+TGG | - | chr3.4:95155958-95155977 | None:intergenic | 50.0% | |
TGAGGTCGTTGCCGTCAAAA+TGG | + | chr3.4:95155324-95155343 | MS.gene031223:CDS | 50.0% | |
TGCTCCCGCAGAAGACAAAA+AGG | - | chr3.4:95156035-95156054 | None:intergenic | 50.0% | |
TTAGGCTGCACACGCACATT+TGG | - | chr3.4:95159523-95159542 | None:intergenic | 50.0% | |
TTTGGGCAAAGCCGATGAAG+TGG | - | chr3.4:95159812-95159831 | None:intergenic | 50.0% | |
! | ACCACTGGTTGTAGACTGCT+AGG | - | chr3.4:95158998-95159017 | None:intergenic | 50.0% |
! | ATGAGATGGTGCGGTACTGA+TGG | + | chr3.4:95155961-95155980 | MS.gene031223:CDS | 50.0% |
!! | CTCAGAGGTGTCCATATCAG+AGG | - | chr3.4:95155308-95155327 | None:intergenic | 50.0% |
!! | GCATTTTAGCCTTCCTTGGC+AGG | + | chr3.4:95157716-95157735 | MS.gene031223:intron | 50.0% |
ACAGCTTTCAGACCCTGCCA+AGG | - | chr3.4:95157732-95157751 | None:intergenic | 55.0% | |
AGACTGCTAGGCACAGCACT+AGG | - | chr3.4:95158986-95159005 | None:intergenic | 55.0% | |
CTTTCAGACCCTGCCAAGGA+AGG | - | chr3.4:95157728-95157747 | None:intergenic | 55.0% | |
GAAGTTCCTGTGGGCCTTTC+AGG | - | chr3.4:95159859-95159878 | None:intergenic | 55.0% | |
GCACTAGGTACGGCATCTGA+AGG | - | chr3.4:95158959-95158978 | None:intergenic | 55.0% | |
GCCTAGCAGTCTACAACCAG+TGG | + | chr3.4:95158994-95159013 | MS.gene031223:CDS | 55.0% | |
GGCAAAGCCGATGAAGTGGA+CGG | - | chr3.4:95159808-95159827 | None:intergenic | 55.0% | |
TCTAAGCCTGAAAGGCCCAC+AGG | + | chr3.4:95159850-95159869 | MS.gene031223:CDS | 55.0% | |
TTTGACGGCAACGACCTCAG+AGG | - | chr3.4:95155323-95155342 | None:intergenic | 55.0% | |
!! | GGATCTTCTGGGACGTAGTC+TGG | + | chr3.4:95156005-95156024 | MS.gene031223:CDS | 55.0% |
!! | TCTTCTGGGACGTAGTCTGG+AGG | + | chr3.4:95156008-95156027 | MS.gene031223:CDS | 55.0% |
!!! | GCTTGCTTGTTTTGGGGTCC+CGG | - | chr3.4:95156585-95156604 | None:intergenic | 55.0% |
AGTTAGCCCCTCCTCCTGAG+AGG | + | chr3.4:95157977-95157996 | MS.gene031223:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.4 | gene | 95155136 | 95159963 | 95155136 | ID=MS.gene031223 |
chr3.4 | mRNA | 95155136 | 95159963 | 95155136 | ID=MS.gene031223.t1;Parent=MS.gene031223 |
chr3.4 | exon | 95155136 | 95155187 | 95155136 | ID=MS.gene031223.t1.exon1;Parent=MS.gene031223.t1 |
chr3.4 | CDS | 95155136 | 95155187 | 95155136 | ID=cds.MS.gene031223.t1;Parent=MS.gene031223.t1 |
chr3.4 | exon | 95155305 | 95155345 | 95155305 | ID=MS.gene031223.t1.exon2;Parent=MS.gene031223.t1 |
chr3.4 | CDS | 95155305 | 95155345 | 95155305 | ID=cds.MS.gene031223.t1;Parent=MS.gene031223.t1 |
chr3.4 | exon | 95155780 | 95155849 | 95155780 | ID=MS.gene031223.t1.exon3;Parent=MS.gene031223.t1 |
chr3.4 | CDS | 95155780 | 95155849 | 95155780 | ID=cds.MS.gene031223.t1;Parent=MS.gene031223.t1 |
chr3.4 | exon | 95155947 | 95156095 | 95155947 | ID=MS.gene031223.t1.exon4;Parent=MS.gene031223.t1 |
chr3.4 | CDS | 95155947 | 95156095 | 95155947 | ID=cds.MS.gene031223.t1;Parent=MS.gene031223.t1 |
chr3.4 | exon | 95156330 | 95156425 | 95156330 | ID=MS.gene031223.t1.exon5;Parent=MS.gene031223.t1 |
chr3.4 | CDS | 95156330 | 95156425 | 95156330 | ID=cds.MS.gene031223.t1;Parent=MS.gene031223.t1 |
chr3.4 | exon | 95156547 | 95156617 | 95156547 | ID=MS.gene031223.t1.exon6;Parent=MS.gene031223.t1 |
chr3.4 | CDS | 95156547 | 95156617 | 95156547 | ID=cds.MS.gene031223.t1;Parent=MS.gene031223.t1 |
chr3.4 | exon | 95157391 | 95157452 | 95157391 | ID=MS.gene031223.t1.exon7;Parent=MS.gene031223.t1 |
chr3.4 | CDS | 95157391 | 95157452 | 95157391 | ID=cds.MS.gene031223.t1;Parent=MS.gene031223.t1 |
chr3.4 | exon | 95157534 | 95157597 | 95157534 | ID=MS.gene031223.t1.exon8;Parent=MS.gene031223.t1 |
chr3.4 | CDS | 95157534 | 95157597 | 95157534 | ID=cds.MS.gene031223.t1;Parent=MS.gene031223.t1 |
chr3.4 | exon | 95157725 | 95157809 | 95157725 | ID=MS.gene031223.t1.exon9;Parent=MS.gene031223.t1 |
chr3.4 | CDS | 95157725 | 95157809 | 95157725 | ID=cds.MS.gene031223.t1;Parent=MS.gene031223.t1 |
chr3.4 | exon | 95158062 | 95158188 | 95158062 | ID=MS.gene031223.t1.exon10;Parent=MS.gene031223.t1 |
chr3.4 | CDS | 95158062 | 95158188 | 95158062 | ID=cds.MS.gene031223.t1;Parent=MS.gene031223.t1 |
chr3.4 | exon | 95158731 | 95158813 | 95158731 | ID=MS.gene031223.t1.exon11;Parent=MS.gene031223.t1 |
chr3.4 | CDS | 95158731 | 95158813 | 95158731 | ID=cds.MS.gene031223.t1;Parent=MS.gene031223.t1 |
chr3.4 | exon | 95158956 | 95159034 | 95158956 | ID=MS.gene031223.t1.exon12;Parent=MS.gene031223.t1 |
chr3.4 | CDS | 95158956 | 95159034 | 95158956 | ID=cds.MS.gene031223.t1;Parent=MS.gene031223.t1 |
chr3.4 | exon | 95159464 | 95159591 | 95159464 | ID=MS.gene031223.t1.exon13;Parent=MS.gene031223.t1 |
chr3.4 | CDS | 95159464 | 95159591 | 95159464 | ID=cds.MS.gene031223.t1;Parent=MS.gene031223.t1 |
chr3.4 | exon | 95159790 | 95159963 | 95159790 | ID=MS.gene031223.t1.exon14;Parent=MS.gene031223.t1 |
chr3.4 | CDS | 95159790 | 95159963 | 95159790 | ID=cds.MS.gene031223.t1;Parent=MS.gene031223.t1 |
Gene Sequence |
Protein sequence |