AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene031383

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene031383.t1 MTR_2g080010 98.870 354 4 0 1 354 1 354 0.0 729
MS.gene031383.t1 MTR_4g089135 53.581 377 116 14 1 352 1 343 3.30e-111 328
MS.gene031383.t1 MTR_7g085220 67.172 198 46 5 9 199 2 187 3.04e-91 277
MS.gene031383.t1 MTR_2157s0010 68.132 182 50 4 13 191 6 182 3.68e-85 258
MS.gene031383.t1 MTR_7g100990 63.128 179 59 1 15 193 11 182 1.27e-81 252
MS.gene031383.t1 MTR_3g088110 70.482 166 38 2 14 179 6 160 6.15e-81 249
MS.gene031383.t1 MTR_2g093810 49.603 252 82 6 15 228 14 258 6.36e-81 250
MS.gene031383.t1 MTR_5g041940 66.272 169 46 3 15 182 3 161 2.75e-79 243
MS.gene031383.t1 MTR_4g081870 60.000 190 59 4 1 190 1 173 1.23e-77 239
MS.gene031383.t1 MTR_2g079990 64.162 173 49 2 12 184 13 172 2.99e-76 239
MS.gene031383.t1 MTR_8g094580 67.683 164 39 3 15 176 7 158 5.04e-75 233
MS.gene031383.t1 MTR_8g059170 64.740 173 50 3 12 184 11 172 6.33e-74 232
MS.gene031383.t1 MTR_3g096920 67.284 162 42 3 15 176 7 157 2.22e-73 229
MS.gene031383.t1 MTR_2g079990 57.868 197 50 3 12 184 13 200 4.07e-73 232
MS.gene031383.t1 MTR_3g096920 56.545 191 51 4 15 176 7 194 9.86e-67 213
MS.gene031383.t1 MTR_6g011860 53.614 166 74 3 14 179 14 176 1.01e-60 200
MS.gene031383.t1 MTR_5g040420 52.381 168 67 2 17 179 16 175 2.31e-60 199
MS.gene031383.t1 MTR_8g467490 53.086 162 74 1 17 178 16 175 4.50e-60 198
MS.gene031383.t1 MTR_4g108760 36.686 338 178 9 3 333 5 313 3.34e-59 195
MS.gene031383.t1 MTR_6g084430 53.488 172 65 3 12 183 2 158 1.12e-58 192
MS.gene031383.t1 MTR_2g064090 50.820 183 74 5 14 194 5 173 4.10e-58 192
MS.gene031383.t1 MTR_7g005280 54.545 176 64 3 1 176 1 160 6.21e-58 188
MS.gene031383.t1 MTR_3g109340 50.000 172 69 2 8 177 15 171 9.26e-57 189
MS.gene031383.t1 MTR_2g062730 41.441 222 112 4 9 227 4 210 1.06e-56 188
MS.gene031383.t1 MTR_3g109340 49.711 173 69 2 8 177 15 172 1.27e-56 188
MS.gene031383.t1 MTR_2g078700 54.217 166 67 2 14 179 22 178 1.70e-55 186
MS.gene031383.t1 MTR_6g012670 37.333 300 141 11 11 297 16 281 3.51e-55 183
MS.gene031383.t1 MTR_1g008740 50.877 171 65 3 11 177 9 164 5.04e-55 184
MS.gene031383.t1 MTR_1g008740 50.877 171 65 3 11 177 23 178 5.36e-55 184
MS.gene031383.t1 MTR_6g477900 48.889 180 77 3 15 192 6 172 4.23e-54 178
MS.gene031383.t1 MTR_3g064580 53.892 167 63 3 15 179 6 160 4.69e-54 188
MS.gene031383.t1 MTR_5g076850 54.491 167 61 4 15 179 6 159 1.04e-53 187
MS.gene031383.t1 MTR_3g435150 52.761 163 66 3 15 177 16 167 1.26e-53 179
MS.gene031383.t1 MTR_1g069805 41.322 242 106 6 15 246 10 225 2.19e-53 177
MS.gene031383.t1 MTR_4g134460 50.299 167 69 2 17 183 56 208 3.41e-53 181
MS.gene031383.t1 MTR_4g035590 46.561 189 76 5 15 195 8 179 3.85e-53 179
MS.gene031383.t1 MTR_7g085260 49.714 175 77 4 11 183 13 178 9.51e-53 179
MS.gene031383.t1 MTR_6g032770 49.102 167 76 2 14 180 17 174 2.98e-52 177
MS.gene031383.t1 MTR_3g070030 47.368 171 80 2 11 181 15 175 4.26e-52 176
MS.gene031383.t1 MTR_5g012080 48.193 166 70 3 14 176 6 158 7.23e-52 176
MS.gene031383.t1 MTR_5g090970 35.125 279 163 7 17 285 20 290 9.38e-52 174
MS.gene031383.t1 MTR_4g036030 46.927 179 75 5 14 187 6 169 2.84e-51 174
MS.gene031383.t1 MTR_5g021710 47.399 173 73 4 10 179 3 160 3.10e-51 174
MS.gene031383.t1 MTR_8g024480 45.882 170 85 3 12 178 12 177 9.39e-51 175
MS.gene031383.t1 MTR_8g076110 47.619 168 70 4 15 179 6 158 2.77e-50 170
MS.gene031383.t1 MTR_5g090970 35.125 279 162 8 17 285 20 289 3.04e-50 170
MS.gene031383.t1 MTR_5g014300 49.412 170 65 5 14 176 5 160 3.95e-50 171
MS.gene031383.t1 MTR_7g097090 50.000 160 65 2 15 174 10 154 8.93e-50 168
MS.gene031383.t1 MTR_4g101680 43.814 194 86 6 14 200 6 183 1.21e-49 170
MS.gene031383.t1 MTR_3g116070 52.121 165 72 4 2 163 11 171 4.77e-49 168
MS.gene031383.t1 MTR_2g068880 47.305 167 77 4 17 176 24 186 1.91e-48 166
MS.gene031383.t1 MTR_8g099750 48.256 172 78 4 15 186 14 174 4.56e-48 162
MS.gene031383.t1 MTR_4g098630 48.193 166 72 4 14 176 5 159 4.79e-48 165
MS.gene031383.t1 MTR_2g068920 46.552 174 84 4 17 184 23 193 5.61e-48 164
MS.gene031383.t1 MTR_2g064470 48.485 165 71 4 12 176 8 158 6.58e-48 164
MS.gene031383.t1 MTR_7g011130 46.286 175 88 3 11 181 15 187 1.01e-47 165
MS.gene031383.t1 MTR_1g096430 46.784 171 72 5 15 181 7 162 5.05e-47 162
MS.gene031383.t1 MTR_4g075980 41.538 195 95 4 5 197 6 183 6.31e-47 161
MS.gene031383.t1 MTR_8g094580 66.087 115 25 3 64 176 2 104 3.95e-46 157
MS.gene031383.t1 MTR_7g011120 45.614 171 85 3 11 179 4 168 1.26e-45 158
MS.gene031383.t1 MTR_3g098810 51.149 174 71 6 15 185 14 176 1.28e-45 156
MS.gene031383.t1 MTR_1g090720 49.102 167 76 3 14 178 41 200 1.85e-45 162
MS.gene031383.t1 MTR_5g069030 47.590 166 72 3 15 178 25 177 1.81e-44 162
MS.gene031383.t1 MTR_3g096140 44.512 164 76 5 15 176 7 157 2.20e-43 151
MS.gene031383.t1 MTR_1g097300 48.980 147 71 2 2 146 6 150 4.59e-43 157
MS.gene031383.t1 MTR_2g086880 50.746 134 63 2 17 149 20 151 6.40e-43 156
MS.gene031383.t1 MTR_2g086880 50.746 134 63 2 17 149 20 151 6.53e-43 157
MS.gene031383.t1 MTR_8g063550 42.188 192 91 6 13 197 4 182 6.95e-43 152
MS.gene031383.t1 MTR_8g063550 42.188 192 91 6 13 197 4 182 1.57e-42 153
MS.gene031383.t1 MTR_3g093050 45.181 166 76 3 15 178 22 174 1.58e-42 156
MS.gene031383.t1 MTR_3g096140 45.062 162 74 5 17 176 9 157 1.63e-42 151
MS.gene031383.t1 MTR_3g093050 45.181 166 76 3 15 178 22 174 1.77e-42 156
MS.gene031383.t1 MTR_8g063550 42.188 192 91 6 13 197 4 182 2.27e-42 153
MS.gene031383.t1 MTR_1g090723 40.404 198 95 5 17 204 10 194 2.50e-42 155
MS.gene031383.t1 MTR_3g098810 57.252 131 52 2 15 143 14 142 3.39e-42 145
MS.gene031383.t1 MTR_1g090723 40.404 198 94 6 17 204 10 193 4.01e-41 152
MS.gene031383.t1 MTR_1g090723 40.404 198 94 6 17 204 10 193 4.85e-41 152
MS.gene031383.t1 MTR_8g023840 46.626 163 67 4 14 173 10 155 5.24e-41 148
MS.gene031383.t1 MTR_0036s0150 33.117 308 168 12 17 304 7 296 6.84e-41 150
MS.gene031383.t1 MTR_3g093040 42.515 167 81 3 14 178 107 260 7.76e-41 145
MS.gene031383.t1 MTR_8g093580 41.146 192 93 6 13 197 4 182 1.05e-39 147
MS.gene031383.t1 MTR_4g094302 41.975 162 81 2 15 176 11 159 1.65e-38 136
MS.gene031383.t1 MTR_3g070040 42.945 163 81 3 19 181 12 162 2.69e-38 139
MS.gene031383.t1 MTR_8g023900 33.449 287 168 11 13 278 186 470 8.15e-37 138
MS.gene031383.t1 MTR_8g023900 39.766 171 75 5 15 177 12 162 3.74e-32 125
MS.gene031383.t1 MTR_8g023930 33.935 277 129 9 15 288 24 249 1.99e-36 137
MS.gene031383.t1 MTR_4g094302 47.656 128 59 1 15 142 11 130 2.71e-36 129
MS.gene031383.t1 MTR_8g023860 39.877 163 78 4 14 173 11 156 7.56e-34 129
MS.gene031383.t1 MTR_4g052620 40.314 191 88 8 15 192 5 182 1.26e-33 125
MS.gene031383.t1 MTR_3g096140 40.940 149 73 5 30 176 1 136 1.09e-32 124
MS.gene031383.t1 MTR_2g086690 39.674 184 84 8 16 185 5 175 1.91e-30 116
MS.gene031383.t1 MTR_7g105170 37.143 175 97 5 14 182 3 170 2.48e-30 116
MS.gene031383.t1 MTR_8g093790 40.123 162 64 5 15 176 10 138 1.48e-28 109
MS.gene031383.t1 MTR_8g023880 34.101 217 102 8 14 212 6 199 6.78e-28 110
MS.gene031383.t1 MTR_3g096400 36.585 164 91 6 15 175 7 160 4.59e-25 101
MS.gene031383.t1 MTR_7g070140 54.321 81 37 0 68 148 17 97 1.14e-24 98.2
MS.gene031383.t1 MTR_7g083360 33.088 136 85 4 7 140 2 133 2.40e-19 84.0
MS.gene031383.t1 MTR_7g083370 32.394 142 88 5 7 145 2 138 4.70e-19 82.8
MS.gene031383.t1 MTR_7g083330 34.375 128 78 4 15 140 18 141 6.63e-17 78.6
MS.gene031383.t1 MTR_7g116460 29.651 172 95 7 21 182 11 166 1.77e-12 66.2
MS.gene031383.t1 MTR_1g087190 56.250 48 18 2 17 62 7 53 2.54e-12 61.6
MS.gene031383.t1 MTR_4g088245 29.012 162 96 5 1 146 54 212 2.56e-12 67.4
MS.gene031383.t1 MTR_7g070150 43.662 71 26 2 106 176 1 57 2.63e-12 62.8
MS.gene031383.t1 MTR_8g069160 29.012 162 96 5 1 146 54 212 2.67e-12 66.6
MS.gene031383.t1 MTR_1g093680 33.544 158 80 9 5 143 47 198 1.38e-11 65.9
MS.gene031383.t1 MTR_8g102240 31.613 155 80 7 15 146 47 198 1.56e-11 65.9
MS.gene031383.t1 MTR_8g102240 31.613 155 80 7 15 146 47 198 1.56e-11 65.9
MS.gene031383.t1 MTR_4g078875 32.895 152 80 7 13 146 46 193 2.10e-11 64.3
MS.gene031383.t1 MTR_2g090735 29.560 159 92 6 1 142 34 189 7.03e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene031383.t1 AT3G15510 53.743 374 140 11 1 353 1 362 3.56e-118 346
MS.gene031383.t1 AT1G61110 47.658 363 130 8 5 353 6 322 2.42e-100 299
MS.gene031383.t1 AT1G52880 49.459 370 119 11 1 353 1 319 4.68e-95 286
MS.gene031383.t1 AT3G04070 65.574 183 48 3 15 182 10 192 6.74e-84 259
MS.gene031383.t1 AT3G04070 67.442 172 49 2 14 182 9 176 6.01e-82 253
MS.gene031383.t1 AT1G69490 60.963 187 62 3 10 196 4 179 9.74e-81 247
MS.gene031383.t1 AT1G01720 69.822 169 40 3 14 181 6 164 4.75e-79 244
MS.gene031383.t1 AT1G77450 53.306 242 88 6 14 242 9 238 1.21e-78 241
MS.gene031383.t1 AT5G63790 66.867 166 46 2 14 179 49 205 1.41e-75 236
MS.gene031383.t1 AT5G63790 66.867 166 46 2 14 179 59 215 1.93e-75 236
MS.gene031383.t1 AT5G08790 66.867 166 46 3 14 179 6 162 2.02e-75 234
MS.gene031383.t1 AT1G52890 62.500 184 53 4 1 184 3 170 2.64e-75 235
MS.gene031383.t1 AT3G15500 65.476 168 45 3 12 179 11 165 5.68e-74 232
MS.gene031383.t1 AT4G27410 60.109 183 56 4 12 190 11 180 7.66e-74 231
MS.gene031383.t1 AT4G27410 54.000 200 58 4 12 190 11 197 1.04e-69 221
MS.gene031383.t1 AT5G39820 51.744 172 73 2 17 178 22 193 2.95e-60 197
MS.gene031383.t1 AT5G13180 58.642 162 52 2 15 176 14 160 8.51e-59 191
MS.gene031383.t1 AT3G18400 52.353 170 67 3 12 181 2 157 1.33e-58 192
MS.gene031383.t1 AT1G76420 53.988 163 63 2 15 177 22 172 3.42e-58 192
MS.gene031383.t1 AT1G26870 51.515 165 78 1 15 179 16 178 2.69e-57 192
MS.gene031383.t1 AT5G39610 53.012 166 67 3 11 176 16 170 9.30e-57 186
MS.gene031383.t1 AT5G18270 45.413 218 96 6 9 213 15 222 1.25e-56 187
MS.gene031383.t1 AT5G61430 53.892 167 66 3 11 177 12 167 2.36e-56 187
MS.gene031383.t1 AT2G24430 52.353 170 63 2 11 177 12 166 2.55e-56 186
MS.gene031383.t1 AT2G24430 52.353 170 63 2 11 177 12 166 2.55e-56 186
MS.gene031383.t1 AT5G07680 53.846 169 63 4 11 177 13 168 5.11e-56 186
MS.gene031383.t1 AT5G18270 44.954 218 97 6 9 213 15 222 6.46e-56 186
MS.gene031383.t1 AT1G79580 48.925 186 75 4 1 181 1 171 1.97e-55 186
MS.gene031383.t1 AT1G79580 48.925 186 75 4 1 181 1 171 1.97e-55 186
MS.gene031383.t1 AT1G79580 48.925 186 75 4 1 181 1 171 1.97e-55 186
MS.gene031383.t1 AT1G79580 48.925 186 75 4 1 181 1 171 1.97e-55 186
MS.gene031383.t1 AT1G79580 48.925 186 75 4 1 181 1 171 1.97e-55 186
MS.gene031383.t1 AT5G07680 54.217 166 61 4 14 177 2 154 2.27e-55 184
MS.gene031383.t1 AT3G04060 48.259 201 86 6 14 206 19 209 3.22e-55 184
MS.gene031383.t1 AT3G29035 60.150 133 51 1 10 142 19 149 5.25e-55 183
MS.gene031383.t1 AT3G03200 50.000 176 74 3 15 188 6 169 6.35e-55 187
MS.gene031383.t1 AT2G33480 50.543 184 67 5 1 180 1 164 3.49e-54 179
MS.gene031383.t1 AT5G53950 50.000 170 76 1 9 178 11 171 6.17e-54 182
MS.gene031383.t1 AT3G15170 51.515 165 71 2 15 179 20 175 1.97e-53 179
MS.gene031383.t1 AT2G33480 50.543 184 69 6 1 180 1 166 2.38e-53 177
MS.gene031383.t1 AT3G17730 50.847 177 71 6 15 189 6 168 3.16e-53 176
MS.gene031383.t1 AT5G17260 51.515 165 66 3 14 176 5 157 3.85e-53 182
MS.gene031383.t1 AT1G65910 51.515 165 65 5 15 177 6 157 4.38e-53 185
MS.gene031383.t1 AT2G02450 48.503 167 72 2 17 183 53 205 4.03e-52 177
MS.gene031383.t1 AT2G02450 48.503 167 72 2 17 183 53 205 4.38e-52 178
MS.gene031383.t1 AT3G12977 45.810 179 82 4 1 176 1 167 5.84e-52 174
MS.gene031383.t1 AT1G33280 48.824 170 68 4 15 181 8 161 1.08e-51 174
MS.gene031383.t1 AT4G36160 47.486 179 71 5 1 176 5 163 1.10e-51 176
MS.gene031383.t1 AT4G36160 47.486 179 71 5 1 176 1 159 1.11e-51 176
MS.gene031383.t1 AT4G36160 47.486 179 71 5 1 176 1 159 1.11e-51 176
MS.gene031383.t1 AT1G56010 37.943 282 147 8 2 266 6 276 1.62e-51 174
MS.gene031383.t1 AT2G43000 45.833 168 79 2 17 184 20 175 2.54e-51 172
MS.gene031383.t1 AT4G10350 49.405 168 67 4 15 178 9 162 3.46e-51 174
MS.gene031383.t1 AT2G18060 47.929 169 70 4 14 179 8 161 4.23e-51 174
MS.gene031383.t1 AT2G18060 47.929 169 70 4 14 179 8 161 4.23e-51 174
MS.gene031383.t1 AT2G46770 43.316 187 99 3 1 182 2 186 5.64e-51 174
MS.gene031383.t1 AT5G62380 49.704 169 67 4 14 179 6 159 1.35e-50 172
MS.gene031383.t1 AT5G62380 49.704 169 67 4 14 179 6 159 1.35e-50 172
MS.gene031383.t1 AT1G62700 42.786 201 88 5 14 202 6 191 1.91e-50 173
MS.gene031383.t1 AT1G62700 42.786 201 88 5 14 202 6 191 1.91e-50 173
MS.gene031383.t1 AT5G46590 49.390 164 70 4 15 176 6 158 4.32e-50 169
MS.gene031383.t1 AT3G10480 44.286 210 95 5 3 205 15 209 6.63e-50 173
MS.gene031383.t1 AT1G12260 46.988 166 70 4 14 176 6 156 8.83e-50 170
MS.gene031383.t1 AT5G46590 55.639 133 56 2 15 145 6 137 8.92e-50 168
MS.gene031383.t1 AT5G66300 47.337 169 72 3 14 179 11 165 9.72e-50 168
MS.gene031383.t1 AT1G12260 46.988 166 70 4 14 176 6 156 1.09e-49 171
MS.gene031383.t1 AT3G10480 44.286 210 96 5 3 205 15 210 1.56e-49 172
MS.gene031383.t1 AT4G17980 48.171 164 74 2 15 176 6 160 2.06e-49 167
MS.gene031383.t1 AT1G71930 43.017 179 84 3 12 187 6 169 2.43e-49 168
MS.gene031383.t1 AT1G71930 43.017 179 84 3 12 187 6 169 2.43e-49 168
MS.gene031383.t1 AT4G17980 48.171 164 74 2 15 176 6 160 2.62e-49 167
MS.gene031383.t1 AT3G10490 42.857 210 99 5 3 205 15 210 7.92e-49 164
MS.gene031383.t1 AT1G32770 43.931 173 91 3 12 181 13 182 1.66e-48 167
MS.gene031383.t1 AT3G61910 42.135 178 96 3 12 184 8 183 2.10e-48 166
MS.gene031383.t1 AT3G10500 48.810 168 71 4 14 179 8 162 9.00e-48 169
MS.gene031383.t1 AT1G54330 49.697 165 65 4 14 176 5 153 2.03e-47 162
MS.gene031383.t1 AT4G28530 47.191 178 63 3 15 176 10 172 3.14e-47 164
MS.gene031383.t1 AT5G04410 48.810 168 71 4 14 179 8 162 3.14e-47 168
MS.gene031383.t1 AT1G32510 47.126 174 72 5 15 180 6 167 6.28e-47 161
MS.gene031383.t1 AT3G10490 42.857 210 99 5 3 205 15 210 6.87e-47 165
MS.gene031383.t1 AT1G33060 48.171 164 70 3 15 176 24 174 1.03e-46 168
MS.gene031383.t1 AT1G33060 48.171 164 70 3 15 176 24 174 1.11e-46 168
MS.gene031383.t1 AT2G17040 45.122 164 73 3 17 179 8 155 1.12e-45 157
MS.gene031383.t1 AT3G10480 39.095 243 94 6 3 205 15 243 3.82e-45 162
MS.gene031383.t1 AT1G34180 47.853 163 70 4 17 177 18 167 6.07e-45 160
MS.gene031383.t1 AT1G34180 47.853 163 70 4 17 177 18 167 3.38e-44 160
MS.gene031383.t1 AT3G12910 47.368 171 81 5 17 181 23 190 6.63e-44 154
MS.gene031383.t1 AT4G35580 41.584 202 92 4 14 202 8 196 7.21e-44 158
MS.gene031383.t1 AT4G35580 45.455 176 81 3 14 187 8 170 8.04e-44 159
MS.gene031383.t1 AT4G35580 45.455 176 81 3 14 187 8 170 8.17e-44 159
MS.gene031383.t1 AT1G34190 46.626 163 72 4 17 177 18 167 9.06e-44 159
MS.gene031383.t1 AT5G24590 43.478 184 86 5 14 193 12 181 1.92e-43 156
MS.gene031383.t1 AT3G49530 43.636 165 79 3 14 176 12 164 3.09e-43 154
MS.gene031383.t1 AT3G49530 43.636 165 79 3 14 176 12 164 4.01e-43 155
MS.gene031383.t1 AT1G34180 44.571 175 70 4 17 177 18 179 1.19e-42 154
MS.gene031383.t1 AT5G64060 46.061 165 74 4 14 176 5 156 2.00e-42 151
MS.gene031383.t1 AT1G34180 44.571 175 70 4 17 177 18 179 6.45e-42 154
MS.gene031383.t1 AT5G09330 46.341 164 73 3 15 176 6 156 1.10e-41 152
MS.gene031383.t1 AT5G09330 46.341 164 73 3 15 176 6 156 1.10e-41 152
MS.gene031383.t1 AT5G09330 46.341 164 73 3 15 176 6 156 1.10e-41 152
MS.gene031383.t1 AT5G09330 46.341 164 73 3 15 176 6 156 1.10e-41 152
MS.gene031383.t1 AT5G09330 46.341 164 73 3 15 176 6 156 1.10e-41 152
MS.gene031383.t1 AT2G27300 41.753 194 85 6 15 207 14 180 1.93e-41 148
MS.gene031383.t1 AT1G32870 49.701 167 69 5 15 179 10 163 3.98e-39 145
MS.gene031383.t1 AT1G32870 49.701 167 69 5 15 179 10 163 5.98e-39 145
MS.gene031383.t1 AT1G32870 49.701 167 69 5 15 179 46 199 8.88e-39 145
MS.gene031383.t1 AT3G44290 38.418 177 88 4 17 192 16 172 3.10e-38 136
MS.gene031383.t1 AT5G64530 42.169 166 81 3 14 176 2 155 4.31e-38 135
MS.gene031383.t1 AT3G44290 39.412 170 82 4 17 185 16 165 9.35e-38 138
MS.gene031383.t1 AT5G22290 36.702 188 92 6 3 183 9 176 1.53e-37 138
MS.gene031383.t1 AT5G64530 48.092 131 56 2 14 144 2 120 1.69e-36 130
MS.gene031383.t1 AT5G04395 40.764 157 79 2 3 145 16 172 4.72e-36 129
MS.gene031383.t1 AT1G56010 36.986 219 111 7 64 266 2 209 1.59e-32 122
MS.gene031383.t1 AT5G61430 51.754 114 44 3 64 177 2 104 7.20e-32 121
MS.gene031383.t1 AT3G12977 47.788 113 47 3 64 176 14 114 1.17e-30 116
MS.gene031383.t1 AT4G10350 49.107 112 42 3 68 178 18 115 1.14e-29 115
MS.gene031383.t1 AT3G04420 43.411 129 67 3 16 140 4 130 4.74e-29 114
MS.gene031383.t1 AT3G44350 37.500 176 90 6 14 182 4 166 7.20e-29 112
MS.gene031383.t1 AT2G33480 50.427 117 39 5 68 180 8 109 9.65e-29 111
MS.gene031383.t1 AT3G04420 43.411 129 67 3 16 140 4 130 1.05e-28 114
MS.gene031383.t1 AT4G28530 50.000 108 38 1 15 106 10 117 3.60e-28 112
MS.gene031383.t1 AT5G22380 36.842 171 92 5 18 182 8 168 8.36e-28 109
MS.gene031383.t1 AT1G02230 41.007 139 74 4 16 149 4 139 1.79e-27 111
MS.gene031383.t1 AT4G01550 34.356 163 87 5 18 176 7 153 2.17e-26 109
MS.gene031383.t1 AT3G44350 40.288 139 73 4 14 145 4 139 2.18e-26 103
MS.gene031383.t1 AT1G02250 29.740 269 156 9 16 274 4 249 8.84e-26 106
MS.gene031383.t1 AT4G01520 39.850 133 75 4 16 143 5 137 2.41e-23 99.0
MS.gene031383.t1 AT4G01540 40.458 131 73 4 18 143 7 137 6.68e-23 99.4
MS.gene031383.t1 AT5G14000 37.879 132 76 3 14 143 14 141 1.07e-22 93.2
MS.gene031383.t1 AT4G01540 40.458 131 73 4 18 143 7 137 1.24e-22 99.0
MS.gene031383.t1 AT4G01540 40.458 131 73 4 18 143 7 137 1.31e-22 98.2
MS.gene031383.t1 AT1G02220 39.535 129 69 4 16 140 4 127 1.34e-22 98.2
MS.gene031383.t1 AT4G01540 40.458 131 73 4 18 143 7 137 1.51e-22 98.2
MS.gene031383.t1 AT5G14000 37.879 132 76 3 14 143 14 141 3.35e-22 93.6
MS.gene031383.t1 AT2G43000 42.593 108 50 2 77 184 2 97 5.08e-22 92.8
MS.gene031383.t1 AT1G01010 38.806 134 68 5 18 140 6 136 5.71e-20 90.9
MS.gene031383.t1 AT5G50820 36.029 136 75 5 14 146 16 142 1.44e-17 80.5
MS.gene031383.t1 AT3G56530 32.164 171 98 5 7 174 44 199 2.97e-17 82.0
MS.gene031383.t1 AT3G10490 41.304 92 42 2 88 179 2 81 1.92e-16 79.7
MS.gene031383.t1 AT3G10490 41.304 92 42 2 88 179 2 81 1.92e-16 79.7
MS.gene031383.t1 AT2G18060 43.678 87 34 3 93 179 2 73 1.13e-15 76.6
MS.gene031383.t1 AT3G55210 32.184 174 87 7 15 174 11 167 5.84e-15 74.7
MS.gene031383.t1 AT5G56620 33.333 159 76 6 15 146 43 198 1.67e-14 74.7
MS.gene031383.t1 AT5G56620 33.333 159 76 6 15 146 43 198 2.04e-14 74.3
MS.gene031383.t1 AT5G56620 33.333 159 76 6 15 146 43 198 3.13e-14 73.6
MS.gene031383.t1 AT1G28470 32.432 148 79 7 13 143 75 218 5.82e-13 69.3
MS.gene031383.t1 AT1G25580 33.333 144 77 6 13 143 56 193 1.77e-12 68.6
MS.gene031383.t1 AT5G14490 26.374 273 147 13 13 256 56 303 2.24e-12 67.8
MS.gene031383.t1 AT5G14490 26.374 273 147 13 13 256 53 300 2.42e-12 67.8
MS.gene031383.t1 AT5G14490 32.450 151 76 7 13 143 56 200 3.85e-12 67.0
MS.gene031383.t1 AT4G29230 32.051 156 79 7 15 146 48 200 4.43e-12 67.4
MS.gene031383.t1 AT4G29230 32.051 156 79 7 15 146 47 199 4.67e-12 67.4
MS.gene031383.t1 AT5G14490 32.450 151 76 7 13 143 53 197 6.01e-12 65.9
MS.gene031383.t1 AT3G04430 34.586 133 73 5 21 141 6 136 7.87e-12 64.3
MS.gene031383.t1 AT4G29230 32.051 156 79 7 15 146 48 200 9.66e-12 66.2
MS.gene031383.t1 AT4G28500 33.108 148 79 6 13 143 57 201 4.96e-11 63.5

Find 90 sgRNAs with CRISPR-Local

Find 118 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTCTCTTCTCTTTATAAT+TGG 0.137711 2.1:-20101844 MS.gene031383:CDS
TCATTCCTTCTAATAAATTT+TGG 0.209197 2.1:+20101972 None:intergenic
GGGCTGCAACTTCTGGTTAT+TGG 0.227988 2.1:-20102585 MS.gene031383:CDS
ATGAATAACAACAATAATTT+AGG 0.242375 2.1:-20101947 MS.gene031383:CDS
AAGAGAAGAGAGTGTTCTTT+TGG 0.244314 2.1:+20101853 None:intergenic
ATCTAACAAAAGGTTTAGTT+TGG 0.274253 2.1:-20101783 MS.gene031383:CDS
TTCATCCCTTGAATTTGATA+TGG 0.291612 2.1:+20101641 None:intergenic
CCAAACAGGGCTGCAACTTC+TGG 0.303061 2.1:-20102592 MS.gene031383:CDS
AATGACCAAAATTTATTAGA+AGG 0.304217 2.1:-20101977 MS.gene031383:CDS
ATCAAATTCAAGGGATGAAT+TGG 0.314410 2.1:-20101637 MS.gene031383:CDS
CAACCAGGAGGCCTATTATT+AGG 0.329457 2.1:+20102412 None:intergenic
TAACTACAACAATGCATTGT+TGG 0.355331 2.1:-20102002 MS.gene031383:CDS
CGGAATCCAGGCGGGAGATT+CGG 0.368393 2.1:+20103091 None:intergenic
TTTGAAGATGTTGTCATAGT+TGG 0.369870 2.1:+20101890 None:intergenic
GGTCACCAGTGGAACATGAT+AGG 0.370388 2.1:-20102129 MS.gene031383:CDS
CGAATGGAGCTAGGCCAAAC+AGG 0.379899 2.1:-20102606 MS.gene031383:CDS
CTGATAATAAGCCTAATAAT+AGG 0.380441 2.1:-20102423 MS.gene031383:CDS
GTTGATGCAATGAAGATGTT+TGG 0.384568 2.1:+20101687 None:intergenic
TTGATGCAATGAAGATGTTT+GGG 0.386161 2.1:+20101688 None:intergenic
CCAGAAGTTGCAGCCCTGTT+TGG 0.389855 2.1:+20102592 None:intergenic
TTTGTAGCTAAGGCAACGTT+TGG 0.392260 2.1:-20102673 MS.gene031383:intron
ACCTTGAAGCAGCACTCATT+TGG 0.405462 2.1:+20102053 None:intergenic
TATATTTGTAGCTTGATGAT+TGG 0.405658 2.1:-20102189 MS.gene031383:intron
TTCGGATACTTCCTGTCCCT+TGG 0.410697 2.1:+20102625 None:intergenic
CTTCATCTGTAGGGTGAAAT+CGG 0.420047 2.1:+20103071 None:intergenic
ATATTTGTAGCTTGATGATT+GGG 0.422988 2.1:-20102188 MS.gene031383:intron
ATCTCTACAAATTTGATCCA+TGG 0.432194 2.1:-20102976 MS.gene031383:CDS
GCCAAATGAGTGCTGCTTCA+AGG 0.436617 2.1:-20102054 MS.gene031383:CDS
GTACTTCATCATCTAACAAA+AGG 0.449336 2.1:-20101793 MS.gene031383:CDS
ATTTGGCCCACGTTGATTGA+TGG 0.453048 2.1:+20102070 None:intergenic
TCTGGTTATTGGAAGGCAAC+TGG 0.454372 2.1:-20102574 MS.gene031383:CDS
GATTCAATGGATGATATGAT+TGG 0.456909 2.1:-20102103 MS.gene031383:CDS
CAAGAGGTATCAAAACCAAT+TGG 0.457331 2.1:-20102468 MS.gene031383:CDS
AGTTGGTGTGAAGAAAGCTT+TGG 0.457762 2.1:-20102512 MS.gene031383:CDS
CTGTTTGGCCTAGCTCCATT+CGG 0.458288 2.1:+20102607 None:intergenic
GAAAGTACCGATTCATCAAC+TGG 0.458560 2.1:-20103124 MS.gene031383:CDS
ATACTCATGCATGATCCAAT+TGG 0.459236 2.1:+20102453 None:intergenic
ATTGATCCCAACATTGTTTG+TGG 0.459341 2.1:+20101665 None:intergenic
TCAATACCATATCAAATTCA+AGG 0.461436 2.1:-20101647 MS.gene031383:CDS
GAGATCAACTTCAGCTATGA+TGG 0.464880 2.1:+20102994 None:intergenic
GTCCCACCAGAAGTTAAAAC+AGG 0.472832 2.1:+20102541 None:intergenic
TTTAGGAGGTTCAAATTCAA+AGG 0.477795 2.1:-20101930 MS.gene031383:CDS
CATCAACCACAAACAATGTT+GGG 0.481234 2.1:-20101671 MS.gene031383:CDS
GCTATGATGGCTACTGGTAA+AGG 0.482914 2.1:+20103007 None:intergenic
TGATGAATCGGTACTTTCCA+TGG 0.489648 2.1:+20103129 None:intergenic
ATTGGATCATGCATGAGTAT+AGG 0.491072 2.1:-20102450 MS.gene031383:CDS
TTGCGAACCAGTTGATGAAT+CGG 0.491396 2.1:+20103117 None:intergenic
ACATGATAGGGAAGATTCAA+TGG 0.491852 2.1:-20102116 MS.gene031383:CDS
AAGCCTAATAATAGGCCTCC+TGG 0.492045 2.1:-20102415 MS.gene031383:CDS
TAGGCCTCCTGGTTGTGACT+TGG 0.494714 2.1:-20102404 MS.gene031383:CDS
AGGCCTCCTGGTTGTGACTT+GGG 0.495640 2.1:-20102403 MS.gene031383:CDS
GCATCAACCACAAACAATGT+TGG 0.505479 2.1:-20101672 MS.gene031383:CDS
GAAGTACCTGGTAGCTCCCA+TGG 0.514804 2.1:+20102959 None:intergenic
TCTCTACAAATTTGATCCAT+GGG 0.518291 2.1:-20102975 MS.gene031383:CDS
ATTTCTTTAGTCCAAGGGAC+AGG 0.525984 2.1:-20102636 MS.gene031383:CDS
AATAACAACAATAATTTAGG+AGG 0.528493 2.1:-20101944 MS.gene031383:CDS
TTGATGATTGGGTGTTGTGC+CGG 0.533907 2.1:-20102177 MS.gene031383:CDS
GTAGGGTGAAATCGGAATCC+AGG 0.534369 2.1:+20103079 None:intergenic
ACAACAAGCTCTTCATCTGT+AGG 0.541287 2.1:+20103061 None:intergenic
CAACAACCGAATCTCCCGCC+TGG 0.542994 2.1:-20103097 MS.gene031383:CDS
GTGAGGAATGATCATGAGAA+TGG 0.543694 2.1:-20101752 MS.gene031383:CDS
ACTTCAGCTATGATGGCTAC+TGG 0.548165 2.1:+20103001 None:intergenic
ATTCAAGGGATGAATTGGTA+TGG 0.551889 2.1:-20101632 MS.gene031383:CDS
GTGGTATTTCTTTAGTCCAA+GGG 0.552045 2.1:-20102641 MS.gene031383:CDS
GGAAGTATCCGAATGGAGCT+AGG 0.553614 2.1:-20102615 MS.gene031383:CDS
TGCAACTTCTGGTTATTGGA+AGG 0.559634 2.1:-20102581 MS.gene031383:CDS
AGTGGTATTTCTTTAGTCCA+AGG 0.560338 2.1:-20102642 MS.gene031383:CDS
TCTTCCCTATCATGTTCCAC+TGG 0.564067 2.1:+20102124 None:intergenic
CAACAAGCTCTTCATCTGTA+GGG 0.567380 2.1:+20103062 None:intergenic
TCAATGGATGATATGATTGG+AGG 0.574207 2.1:-20102100 MS.gene031383:CDS
GGTGAAATCGGAATCCAGGC+GGG 0.576719 2.1:+20103083 None:intergenic
TTGTTACCCAAGTCACAACC+AGG 0.578434 2.1:+20102397 None:intergenic
GTCACCAGTGGAACATGATA+GGG 0.580753 2.1:-20102128 MS.gene031383:CDS
ACAAGAAAAGCAACACACAT+AGG 0.587318 2.1:-20102150 MS.gene031383:CDS
CAATACCATATCAAATTCAA+GGG 0.587495 2.1:-20101646 MS.gene031383:CDS
CAACGTTTGGAGAGCAAGAG+TGG 0.588251 2.1:-20102660 MS.gene031383:CDS
TTTGATCCATGGGAGCTACC+AGG 0.590967 2.1:-20102965 MS.gene031383:intron
TTAGTTTGGAAAATGTTGTG+AGG 0.623242 2.1:-20101769 MS.gene031383:CDS
GAAGATGTTGCAGCTCAAGT+TGG 0.634032 2.1:-20101815 MS.gene031383:CDS
TGGCCCACGTTGATTGATGG+TGG 0.637936 2.1:+20102073 None:intergenic
GAATGGAGCTAGGCCAAACA+GGG 0.639627 2.1:-20102605 MS.gene031383:CDS
AGGGACAGGAAGTATCCGAA+TGG 0.658693 2.1:-20102622 MS.gene031383:CDS
CAACACACATAGGTCACCAG+TGG 0.671269 2.1:-20102140 MS.gene031383:CDS
TGATGCAATGAAGATGTTTG+GGG 0.684869 2.1:+20101689 None:intergenic
GGGTGAAATCGGAATCCAGG+CGG 0.684894 2.1:+20103082 None:intergenic
GATGCAATGAAGATGTTTGG+GGG 0.726632 2.1:+20101690 None:intergenic
TATGGTGGGAAACCACCAAG+AGG 0.726989 2.1:-20102484 MS.gene031383:CDS
GTACCACCATCAATCAACGT+GGG 0.734729 2.1:-20102076 MS.gene031383:CDS
TTACCCAAGTCACAACCAGG+AGG 0.745086 2.1:+20102400 None:intergenic
AGTACCACCATCAATCAACG+TGG 0.752309 2.1:-20102077 MS.gene031383:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGATTATAAGTTTTTTTTTT+GGG - chr2.1:20102044-20102063 MS.gene031383:CDS 10.0%
!! ATGAATAACAACAATAATTT+AGG - chr2.1:20102808-20102827 MS.gene031383:intron 15.0%
!!! GTGATTATAAGTTTTTTTTT+TGG - chr2.1:20102043-20102062 MS.gene031383:CDS 15.0%
!! AACTATGTGTGATAATAAAA+AGG + chr2.1:20102422-20102441 None:intergenic 20.0%
!! AATAACAACAATAATTTAGG+AGG - chr2.1:20102811-20102830 MS.gene031383:intron 20.0%
!! AATGACCAAAATTTATTAGA+AGG - chr2.1:20102778-20102797 MS.gene031383:intron 20.0%
!!! TCATTCCTTCTAATAAATTT+TGG + chr2.1:20102786-20102805 None:intergenic 20.0%
! ATCTAACAAAAGGTTTAGTT+TGG - chr2.1:20102972-20102991 MS.gene031383:CDS 25.0%
! CAATACCATATCAAATTCAA+GGG - chr2.1:20103109-20103128 MS.gene031383:CDS 25.0%
! CTGATAATAAGCCTAATAAT+AGG - chr2.1:20102332-20102351 MS.gene031383:intron 25.0%
! GTTTGAAAATATGTAATCTC+TGG + chr2.1:20101821-20101840 None:intergenic 25.0%
! TAACAAGAAAAACTCTCTAA+GGG - chr2.1:20102375-20102394 MS.gene031383:intron 25.0%
! TAGCTACAAAAAAACCAAAA+GGG + chr2.1:20102072-20102091 None:intergenic 25.0%
! TCAATACCATATCAAATTCA+AGG - chr2.1:20103108-20103127 MS.gene031383:CDS 25.0%
! TCTATCTATCTATCTATTCT+GGG - chr2.1:20101896-20101915 MS.gene031383:CDS 25.0%
! TGTGATAATAAAAAGGAGTT+TGG + chr2.1:20102415-20102434 None:intergenic 25.0%
! TTAGCTACAAAAAAACCAAA+AGG + chr2.1:20102073-20102092 None:intergenic 25.0%
!! ATATTTGTAGCTTGATGATT+GGG - chr2.1:20102567-20102586 MS.gene031383:CDS 25.0%
!! CAAGGTTTCATAATTTTTCA+AGG - chr2.1:20102719-20102738 MS.gene031383:intron 25.0%
!! TATATTTGTAGCTTGATGAT+TGG - chr2.1:20102566-20102585 MS.gene031383:CDS 25.0%
!!! TTTTGGTTTTTTTGTAGCTA+AGG - chr2.1:20102072-20102091 MS.gene031383:CDS 25.0%
ATCAAATTCAAGGGATGAAT+TGG - chr2.1:20103118-20103137 MS.gene031383:CDS 30.0%
ATCTCTACAAATTTGATCCA+TGG - chr2.1:20101779-20101798 MS.gene031383:CDS 30.0%
CACTCTCTTCTCTTTATAAT+TGG - chr2.1:20102911-20102930 MS.gene031383:intron 30.0%
GATTCAATGGATGATATGAT+TGG - chr2.1:20102652-20102671 MS.gene031383:CDS 30.0%
GTAACAAGAAAAACTCTCTA+AGG - chr2.1:20102374-20102393 MS.gene031383:intron 30.0%
GTACTTCATCATCTAACAAA+AGG - chr2.1:20102962-20102981 MS.gene031383:intron 30.0%
GTCTATCTATCTATCTATTC+TGG - chr2.1:20101895-20101914 MS.gene031383:CDS 30.0%
TAACTACAACAATGCATTGT+TGG - chr2.1:20102753-20102772 MS.gene031383:intron 30.0%
TCTCTACAAATTTGATCCAT+GGG - chr2.1:20101780-20101799 MS.gene031383:CDS 30.0%
TTCATCCCTTGAATTTGATA+TGG + chr2.1:20103117-20103136 None:intergenic 30.0%
TTGATGCAATGAAGATGTTT+GGG + chr2.1:20103070-20103089 None:intergenic 30.0%
TTTAGGAGGTTCAAATTCAA+AGG - chr2.1:20102825-20102844 MS.gene031383:intron 30.0%
TTTGAAGATGTTGTCATAGT+TGG + chr2.1:20102868-20102887 None:intergenic 30.0%
! TTAGTTTGGAAAATGTTGTG+AGG - chr2.1:20102986-20103005 MS.gene031383:CDS 30.0%
!!! AAGAAAGCTTTGGTTTTCTA+TGG - chr2.1:20102253-20102272 MS.gene031383:intron 30.0%
!!! TTCGATCATTTTTTCTTGCA+CGG - chr2.1:20101966-20101985 MS.gene031383:CDS 30.0%
!!! TTTTTTTTTGGGTACCCTTT+TGG - chr2.1:20102055-20102074 MS.gene031383:CDS 30.0%
ACAAGAAAAGCAACACACAT+AGG - chr2.1:20102605-20102624 MS.gene031383:CDS 35.0%
ACATGATAGGGAAGATTCAA+TGG - chr2.1:20102639-20102658 MS.gene031383:CDS 35.0%
AGTGGTATTTCTTTAGTCCA+AGG - chr2.1:20102113-20102132 MS.gene031383:CDS 35.0%
ATACTCATGCATGATCCAAT+TGG + chr2.1:20102305-20102324 None:intergenic 35.0%
ATTCAAGGGATGAATTGGTA+TGG - chr2.1:20103123-20103142 MS.gene031383:CDS 35.0%
ATTGATCCCAACATTGTTTG+TGG + chr2.1:20103093-20103112 None:intergenic 35.0%
ATTGGATCATGCATGAGTAT+AGG - chr2.1:20102305-20102324 MS.gene031383:intron 35.0%
CATCAACCACAAACAATGTT+GGG - chr2.1:20103084-20103103 MS.gene031383:CDS 35.0%
GTGGTATTTCTTTAGTCCAA+GGG - chr2.1:20102114-20102133 MS.gene031383:CDS 35.0%
GTTGATGCAATGAAGATGTT+TGG + chr2.1:20103071-20103090 None:intergenic 35.0%
TCAATGGATGATATGATTGG+AGG - chr2.1:20102655-20102674 MS.gene031383:CDS 35.0%
TGATGCAATGAAGATGTTTG+GGG + chr2.1:20103069-20103088 None:intergenic 35.0%
!! CAAGAGGTATCAAAACCAAT+TGG - chr2.1:20102287-20102306 MS.gene031383:intron 35.0%
!!! AAAGCTTTGGTTTTCTATGG+TGG - chr2.1:20102256-20102275 MS.gene031383:intron 35.0%
!!! AAGAGAAGAGAGTGTTCTTT+TGG + chr2.1:20102905-20102924 None:intergenic 35.0%
!!! AAGCTTTGGTTTTCTATGGT+GGG - chr2.1:20102257-20102276 MS.gene031383:intron 35.0%
!!! CAATTGGTTTTGATACCTCT+TGG + chr2.1:20102289-20102308 None:intergenic 35.0%
!!! GATAAGCCTGTTTTAACTTC+TGG - chr2.1:20102208-20102227 MS.gene031383:intron 35.0%
!!! TCGATCATTTTTTCTTGCAC+GGG - chr2.1:20101967-20101986 MS.gene031383:CDS 35.0%
!!! TGTTGCTTTTCTTGTAGATC+CGG + chr2.1:20102600-20102619 None:intergenic 35.0%
ACAACAAGCTCTTCATCTGT+AGG + chr2.1:20101697-20101716 None:intergenic 40.0%
ATTTCTTTAGTCCAAGGGAC+AGG - chr2.1:20102119-20102138 MS.gene031383:CDS 40.0%
CAACAAGCTCTTCATCTGTA+GGG + chr2.1:20101696-20101715 None:intergenic 40.0%
CTTCATCTGTAGGGTGAAAT+CGG + chr2.1:20101687-20101706 None:intergenic 40.0%
GAGATCAACTTCAGCTATGA+TGG + chr2.1:20101764-20101783 None:intergenic 40.0%
GATGCAATGAAGATGTTTGG+GGG + chr2.1:20103068-20103087 None:intergenic 40.0%
GCATCAACCACAAACAATGT+TGG - chr2.1:20103083-20103102 MS.gene031383:CDS 40.0%
GTGAGGAATGATCATGAGAA+TGG - chr2.1:20103003-20103022 MS.gene031383:CDS 40.0%
TTTGTAGCTAAGGCAACGTT+TGG - chr2.1:20102082-20102101 MS.gene031383:CDS 40.0%
! AGTTGGTGTGAAGAAAGCTT+TGG - chr2.1:20102243-20102262 MS.gene031383:intron 40.0%
! TGCAACTTCTGGTTATTGGA+AGG - chr2.1:20102174-20102193 MS.gene031383:CDS 40.0%
!! ATGTAATCTCTGGAAGTACC+TGG + chr2.1:20101811-20101830 None:intergenic 40.0%
!! GAAAGTACCGATTCATCAAC+TGG - chr2.1:20101631-20101650 MS.gene031383:CDS 40.0%
!! TTGCGAACCAGTTGATGAAT+CGG + chr2.1:20101641-20101660 None:intergenic 40.0%
!!! AAGCCTGTTTTAACTTCTGG+TGG - chr2.1:20102211-20102230 MS.gene031383:intron 40.0%
!!! AGCCTGTTTTAACTTCTGGT+GGG - chr2.1:20102212-20102231 MS.gene031383:intron 40.0%
!!! CTGAAGCTGCTTTTTTCTTG+AGG + chr2.1:20101726-20101745 None:intergenic 40.0%
!!! GAAGAGAGTGTTCTTTTGGA+AGG + chr2.1:20102901-20102920 None:intergenic 40.0%
!!! TTGGTTTTGATACCTCTTGG+TGG + chr2.1:20102286-20102305 None:intergenic 40.0%
AAGCCTAATAATAGGCCTCC+TGG - chr2.1:20102340-20102359 MS.gene031383:intron 45.0%
ACCTTGAAGCAGCACTCATT+TGG + chr2.1:20102705-20102724 None:intergenic 45.0%
ACTTCAGCTATGATGGCTAC+TGG + chr2.1:20101757-20101776 None:intergenic 45.0%
AGTACCACCATCAATCAACG+TGG - chr2.1:20102678-20102697 MS.gene031383:intron 45.0%
CAACCAGGAGGCCTATTATT+AGG + chr2.1:20102346-20102365 None:intergenic 45.0%
GAAGATGTTGCAGCTCAAGT+TGG - chr2.1:20102940-20102959 MS.gene031383:intron 45.0%
GCTATGATGGCTACTGGTAA+AGG + chr2.1:20101751-20101770 None:intergenic 45.0%
GTACCACCATCAATCAACGT+GGG - chr2.1:20102679-20102698 MS.gene031383:intron 45.0%
GTCACCAGTGGAACATGATA+GGG - chr2.1:20102627-20102646 MS.gene031383:CDS 45.0%
GTCCCACCAGAAGTTAAAAC+AGG + chr2.1:20102217-20102236 None:intergenic 45.0%
TCTGGTGGGACACAAAAAGT+TGG - chr2.1:20102226-20102245 MS.gene031383:intron 45.0%
TCTGGTTATTGGAAGGCAAC+TGG - chr2.1:20102181-20102200 MS.gene031383:CDS 45.0%
TCTTCCCTATCATGTTCCAC+TGG + chr2.1:20102634-20102653 None:intergenic 45.0%
TTGTTACCCAAGTCACAACC+AGG + chr2.1:20102361-20102380 None:intergenic 45.0%
! ATTTGGCCCACGTTGATTGA+TGG + chr2.1:20102688-20102707 None:intergenic 45.0%
! TTGATGATTGGGTGTTGTGC+CGG - chr2.1:20102578-20102597 MS.gene031383:CDS 45.0%
CAACACACATAGGTCACCAG+TGG - chr2.1:20102615-20102634 MS.gene031383:CDS 50.0%
CAACGTTTGGAGAGCAAGAG+TGG - chr2.1:20102095-20102114 MS.gene031383:CDS 50.0%
CTGTTTGGCCTAGCTCCATT+CGG + chr2.1:20102151-20102170 None:intergenic 50.0%
GAATGGAGCTAGGCCAAACA+GGG - chr2.1:20102150-20102169 MS.gene031383:CDS 50.0%
GGTCACCAGTGGAACATGAT+AGG - chr2.1:20102626-20102645 MS.gene031383:CDS 50.0%
GTAGGGTGAAATCGGAATCC+AGG + chr2.1:20101679-20101698 None:intergenic 50.0%
TTACCCAAGTCACAACCAGG+AGG + chr2.1:20102358-20102377 None:intergenic 50.0%
TTCGGATACTTCCTGTCCCT+TGG + chr2.1:20102133-20102152 None:intergenic 50.0%
TTTGATCCATGGGAGCTACC+AGG - chr2.1:20101790-20101809 MS.gene031383:CDS 50.0%
! GGGCTGCAACTTCTGGTTAT+TGG - chr2.1:20102170-20102189 MS.gene031383:CDS 50.0%
! TATGGTGGGAAACCACCAAG+AGG - chr2.1:20102271-20102290 MS.gene031383:intron 50.0%
!! AGGGACAGGAAGTATCCGAA+TGG - chr2.1:20102133-20102152 MS.gene031383:CDS 50.0%
!! GCCAAATGAGTGCTGCTTCA+AGG - chr2.1:20102701-20102720 MS.gene031383:intron 50.0%
!! GGAAGTATCCGAATGGAGCT+AGG - chr2.1:20102140-20102159 MS.gene031383:CDS 50.0%
AGGCCTCCTGGTTGTGACTT+GGG - chr2.1:20102352-20102371 MS.gene031383:intron 55.0%
CCAAACAGGGCTGCAACTTC+TGG - chr2.1:20102163-20102182 MS.gene031383:CDS 55.0%
CCAGAAGTTGCAGCCCTGTT+TGG + chr2.1:20102166-20102185 None:intergenic 55.0%
CGAATGGAGCTAGGCCAAAC+AGG - chr2.1:20102149-20102168 MS.gene031383:CDS 55.0%
GGGTGAAATCGGAATCCAGG+CGG + chr2.1:20101676-20101695 None:intergenic 55.0%
GGTGAAATCGGAATCCAGGC+GGG + chr2.1:20101675-20101694 None:intergenic 55.0%
TAGGCCTCCTGGTTGTGACT+TGG - chr2.1:20102351-20102370 MS.gene031383:intron 55.0%
! GAAGTACCTGGTAGCTCCCA+TGG + chr2.1:20101799-20101818 None:intergenic 55.0%
! TGGCCCACGTTGATTGATGG+TGG + chr2.1:20102685-20102704 None:intergenic 55.0%
CAACAACCGAATCTCCCGCC+TGG - chr2.1:20101658-20101677 MS.gene031383:CDS 60.0%
CGGAATCCAGGCGGGAGATT+CGG + chr2.1:20101667-20101686 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 20101628 20103149 20101628 ID=MS.gene031383
chr2.1 mRNA 20101628 20103149 20101628 ID=MS.gene031383.t1;Parent=MS.gene031383
chr2.1 exon 20102966 20103149 20102966 ID=MS.gene031383.t1.exon1;Parent=MS.gene031383.t1
chr2.1 CDS 20102966 20103149 20102966 ID=cds.MS.gene031383.t1;Parent=MS.gene031383.t1
chr2.1 exon 20102381 20102688 20102381 ID=MS.gene031383.t1.exon2;Parent=MS.gene031383.t1
chr2.1 CDS 20102381 20102688 20102381 ID=cds.MS.gene031383.t1;Parent=MS.gene031383.t1
chr2.1 exon 20101628 20102200 20101628 ID=MS.gene031383.t1.exon3;Parent=MS.gene031383.t1
chr2.1 CDS 20101628 20102200 20101628 ID=cds.MS.gene031383.t1;Parent=MS.gene031383.t1
Gene Sequence

>MS.gene031383

ATGGAAAGTACCGATTCATCAACTGGTTCGCAACAACCGAATCTCCCGCCTGGATTCCGATTTCACCCTACAGATGAAGAGCTTGTTGTTCATTACCTCAAGAAAAAAGCAGCTTCAGCTCCTTTACCAGTAGCCATCATAGCTGAAGTTGATCTCTACAAATTTGATCCATGGGAGCTACCAGGTACTTCCAGAGATTACATATTTTCAAACTTTACGTTCAAATTCAAAATGAGTTTCTTTTGTTTTGTACTTTTTCTTCTATTTGTCTATCTATCTATCTATTCTGGGAAAAGTCTTTTACTCAGATGATACGTGTTAGAATTTCACACATATTTTTCGATCATTTTTTCTTGCACGGGTTTTTTACTAGTTTTTTTTTATTTTATTGATTTGATTATTTTTGTTTTTTATTGTGATTATAAGTTTTTTTTTTGGGTACCCTTTTGGTTTTTTTGTAGCTAAGGCAACGTTTGGAGAGCAAGAGTGGTATTTCTTTAGTCCAAGGGACAGGAAGTATCCGAATGGAGCTAGGCCAAACAGGGCTGCAACTTCTGGTTATTGGAAGGCAACTGGTACTGATAAGCCTGTTTTAACTTCTGGTGGGACACAAAAAGTTGGTGTGAAGAAAGCTTTGGTTTTCTATGGTGGGAAACCACCAAGAGGTATCAAAACCAATTGGATCATGCATGAGTATAGGCTTGCTGATAATAAGCCTAATAATAGGCCTCCTGGTTGTGACTTGGGTAACAAGAAAAACTCTCTAAGGGTAAGCTCAACTAATCCAAACTCCTTTTTATTATCACACATAGTTAAATCAGCGACGAAAAATTACAAAACGTACAAAAAGTGAAATTGTACGTCTGTTAATTTTTAGTCGTTGATTCAACTTTTTTTATGATTTGTTTTGAATTTTTTATTTTAACTTTTTGTGTGTGTATATTTGTAGCTTGATGATTGGGTGTTGTGCCGGATCTACAAGAAAAGCAACACACATAGGTCACCAGTGGAACATGATAGGGAAGATTCAATGGATGATATGATTGGAGGAGTACCACCATCAATCAACGTGGGCCAAATGAGTGCTGCTTCAAGGTTTCATAATTTTTCAAGGTTGTCATCAAATAACTACAACAATGCATTGTTGGAAAATGACCAAAATTTATTAGAAGGAATGATGATGAATAACAACAATAATTTAGGAGGTTCAAATTCAAAGGCTGAACTATCATTTGTACCAACTATGACAACATCTTCAAATGCTCATTCACCTTCCAAAAGAACACTCTCTTCTCTTTATAATTGGAATGATGAAGATGTTGCAGCTCAAGTTGGTACTTCATCATCTAACAAAAGGTTTAGTTTGGAAAATGTTGTGAGGAATGATCATGAGAATGGAACTGTTGCTACTTCTTTTGCTTCTCTTCTTAATAATCTCCCCCAAACATCTTCATTGCATCAACCACAAACAATGTTGGGATCAATACCATATCAAATTCAAGGGATGAATTGGTATGGTTAA
Protein sequence

>MS.gene031383.t1

MESTDSSTGSQQPNLPPGFRFHPTDEELVVHYLKKKAASAPLPVAIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKALVFYGGKPPRGIKTNWIMHEYRLADNKPNNRPPGCDLGNKKNSLRLDDWVLCRIYKKSNTHRSPVEHDREDSMDDMIGGVPPSINVGQMSAASRFHNFSRLSSNNYNNALLENDQNLLEGMMMNNNNNLGGSNSKAELSFVPTMTTSSNAHSPSKRTLSSLYNWNDEDVAAQVGTSSSNKRFSLENVVRNDHENGTVATSFASLLNNLPQTSSLHQPQTMLGSIPYQIQGMNWYG