AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene031385

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene031385.t1 MTR_2g079990 93.017 358 19 2 1 358 3 354 0.0 682
MS.gene031385.t1 MTR_2g079990 86.269 386 19 3 1 358 3 382 0.0 667
MS.gene031385.t1 MTR_8g059170 65.330 349 96 8 1 347 1 326 1.83e-149 424
MS.gene031385.t1 MTR_3g088110 66.279 172 54 2 10 178 3 173 5.98e-78 241
MS.gene031385.t1 MTR_2g080010 64.162 173 49 2 11 170 12 184 2.68e-76 239
MS.gene031385.t1 MTR_8g094580 67.702 161 47 2 12 168 5 164 2.60e-75 234
MS.gene031385.t1 MTR_4g089135 63.388 183 42 3 14 171 15 197 1.37e-74 234
MS.gene031385.t1 MTR_2157s0010 50.584 257 105 7 10 254 4 250 2.41e-74 231
MS.gene031385.t1 MTR_3g096920 66.049 162 51 2 10 168 3 163 1.58e-73 230
MS.gene031385.t1 MTR_7g085220 63.314 169 49 3 11 166 5 173 6.03e-73 230
MS.gene031385.t1 MTR_7g100990 62.130 169 58 3 5 167 2 170 9.28e-71 224
MS.gene031385.t1 MTR_4g081870 63.057 157 54 1 10 162 5 161 3.51e-70 221
MS.gene031385.t1 MTR_5g041940 63.871 155 52 1 12 162 1 155 4.23e-70 220
MS.gene031385.t1 MTR_2g093810 59.756 164 60 2 10 167 10 173 2.93e-68 218
MS.gene031385.t1 MTR_3g096920 53.769 199 51 2 10 168 3 200 2.91e-67 215
MS.gene031385.t1 MTR_2g064090 55.063 158 68 2 9 163 1 158 3.16e-60 197
MS.gene031385.t1 MTR_5g076850 51.351 185 79 2 9 191 1 176 6.84e-60 204
MS.gene031385.t1 MTR_6g084430 55.769 156 67 1 14 169 5 158 4.81e-59 194
MS.gene031385.t1 MTR_3g435150 55.090 167 73 1 11 175 13 179 3.09e-58 191
MS.gene031385.t1 MTR_6g012670 52.000 175 82 1 4 176 10 184 4.53e-58 191
MS.gene031385.t1 MTR_3g064580 50.262 191 90 3 9 196 1 189 8.89e-58 199
MS.gene031385.t1 MTR_4g108760 53.293 167 76 1 11 175 14 180 1.56e-57 191
MS.gene031385.t1 MTR_7g085260 48.792 207 86 4 12 210 15 209 7.98e-57 189
MS.gene031385.t1 MTR_6g477900 51.592 157 74 1 9 163 1 157 1.86e-56 184
MS.gene031385.t1 MTR_5g040420 52.083 192 80 6 5 185 6 196 2.21e-56 189
MS.gene031385.t1 MTR_3g109340 54.430 158 68 2 13 168 21 176 1.34e-55 186
MS.gene031385.t1 MTR_3g109340 55.000 160 65 3 13 168 21 177 2.24e-55 185
MS.gene031385.t1 MTR_4g134460 56.051 157 62 3 16 169 56 208 3.34e-55 187
MS.gene031385.t1 MTR_3g070030 45.918 196 100 2 11 203 16 208 1.48e-54 183
MS.gene031385.t1 MTR_4g035590 55.263 152 62 2 14 162 8 156 2.63e-54 182
MS.gene031385.t1 MTR_1g008740 54.037 161 66 4 13 168 12 169 3.45e-54 182
MS.gene031385.t1 MTR_1g008740 54.037 161 66 4 13 168 26 183 4.20e-54 182
MS.gene031385.t1 MTR_6g011860 52.469 162 67 2 14 165 15 176 5.84e-54 182
MS.gene031385.t1 MTR_5g021710 44.670 197 101 3 14 204 8 202 6.72e-54 181
MS.gene031385.t1 MTR_8g467490 48.168 191 87 5 16 194 16 206 1.55e-53 181
MS.gene031385.t1 MTR_2g062730 50.595 168 74 4 10 170 6 171 6.05e-53 178
MS.gene031385.t1 MTR_2g078700 55.000 160 60 3 14 165 23 178 7.07e-53 179
MS.gene031385.t1 MTR_1g096430 46.821 173 87 2 14 183 7 177 2.74e-52 176
MS.gene031385.t1 MTR_5g014300 51.786 168 67 4 9 166 1 164 2.86e-52 176
MS.gene031385.t1 MTR_8g076110 48.765 162 78 2 9 167 1 160 4.19e-52 175
MS.gene031385.t1 MTR_6g032770 46.759 216 87 6 12 211 16 219 1.39e-51 176
MS.gene031385.t1 MTR_5g090970 47.150 193 89 3 16 196 20 211 1.71e-51 174
MS.gene031385.t1 MTR_4g036030 50.658 152 70 2 14 162 7 156 2.28e-51 174
MS.gene031385.t1 MTR_8g024480 47.879 165 74 2 10 162 11 175 4.29e-51 176
MS.gene031385.t1 MTR_4g098630 44.949 198 103 3 13 205 5 201 7.14e-51 172
MS.gene031385.t1 MTR_7g005280 54.658 161 66 3 10 168 11 166 8.35e-51 170
MS.gene031385.t1 MTR_5g090970 47.150 193 88 4 16 196 20 210 1.62e-50 171
MS.gene031385.t1 MTR_2g064470 44.898 196 91 5 9 199 6 189 3.01e-50 170
MS.gene031385.t1 MTR_4g101680 51.316 152 69 2 14 162 7 156 3.47e-50 172
MS.gene031385.t1 MTR_7g011130 38.224 259 136 4 11 253 16 266 4.31e-50 171
MS.gene031385.t1 MTR_2g068920 46.798 203 83 6 16 200 23 218 4.77e-50 169
MS.gene031385.t1 MTR_2g068880 49.133 173 72 4 16 172 24 196 1.33e-48 166
MS.gene031385.t1 MTR_5g012080 50.000 154 70 4 14 162 7 158 1.79e-48 167
MS.gene031385.t1 MTR_8g094580 69.091 110 29 2 63 168 2 110 2.08e-48 163
MS.gene031385.t1 MTR_7g011120 46.108 167 81 1 11 168 5 171 3.19e-48 165
MS.gene031385.t1 MTR_1g069805 43.602 211 92 7 1 194 1 201 7.63e-47 160
MS.gene031385.t1 MTR_3g093040 48.148 162 78 3 9 166 103 262 9.37e-47 161
MS.gene031385.t1 MTR_3g096140 46.309 149 78 1 16 162 9 157 1.11e-46 160
MS.gene031385.t1 MTR_5g069030 50.000 164 77 2 4 162 12 175 2.34e-46 167
MS.gene031385.t1 MTR_3g096140 46.309 149 78 1 16 162 9 157 7.46e-46 160
MS.gene031385.t1 MTR_8g063550 42.614 176 96 2 9 182 1 173 7.47e-46 160
MS.gene031385.t1 MTR_2g086880 48.408 157 72 3 9 164 13 161 1.10e-45 163
MS.gene031385.t1 MTR_2g086880 48.408 157 72 3 9 164 13 161 1.45e-45 164
MS.gene031385.t1 MTR_7g097090 48.148 162 74 3 1 160 1 154 1.86e-45 157
MS.gene031385.t1 MTR_8g063550 42.614 176 96 2 9 182 1 173 3.00e-45 160
MS.gene031385.t1 MTR_3g093050 48.750 160 80 1 9 166 17 176 3.10e-45 163
MS.gene031385.t1 MTR_8g063550 42.614 176 96 2 9 182 1 173 4.05e-45 160
MS.gene031385.t1 MTR_3g093050 48.750 160 80 1 9 166 17 176 5.23e-45 163
MS.gene031385.t1 MTR_1g090723 48.718 156 77 2 16 168 10 165 8.29e-45 163
MS.gene031385.t1 MTR_3g116070 52.857 140 63 2 3 139 12 151 1.34e-44 157
MS.gene031385.t1 MTR_1g097300 45.283 159 85 1 12 168 17 175 1.52e-44 161
MS.gene031385.t1 MTR_1g090720 48.521 169 76 3 13 173 41 206 2.45e-44 159
MS.gene031385.t1 MTR_0036s0150 38.889 234 121 6 16 246 7 221 3.43e-44 160
MS.gene031385.t1 MTR_4g075980 49.375 160 72 4 11 167 13 166 3.98e-44 154
MS.gene031385.t1 MTR_1g090723 48.718 156 76 3 16 168 10 164 1.48e-43 159
MS.gene031385.t1 MTR_1g090723 48.718 156 76 3 16 168 10 164 1.84e-43 159
MS.gene031385.t1 MTR_8g093580 41.477 176 98 2 9 182 1 173 1.98e-43 157
MS.gene031385.t1 MTR_3g098810 47.531 162 73 3 14 165 14 173 3.23e-41 145
MS.gene031385.t1 MTR_8g099750 45.000 160 79 3 14 166 14 171 6.99e-41 143
MS.gene031385.t1 MTR_3g070040 42.105 190 100 5 18 203 12 195 2.61e-40 145
MS.gene031385.t1 MTR_3g096140 44.030 134 73 1 31 162 3 136 1.44e-37 138
MS.gene031385.t1 MTR_3g098810 51.515 132 58 2 14 141 14 143 1.47e-36 130
MS.gene031385.t1 MTR_4g094302 40.123 162 81 3 14 167 11 164 1.14e-35 129
MS.gene031385.t1 MTR_2g086690 45.570 158 72 5 15 160 5 160 1.88e-35 130
MS.gene031385.t1 MTR_8g023840 46.104 154 66 6 14 159 11 155 1.02e-34 131
MS.gene031385.t1 MTR_7g105170 36.598 194 103 8 14 189 4 195 1.43e-34 128
MS.gene031385.t1 MTR_4g052620 43.038 158 77 6 14 160 5 160 2.12e-33 125
MS.gene031385.t1 MTR_4g094302 44.531 128 61 2 14 139 11 130 9.41e-33 120
MS.gene031385.t1 MTR_8g023900 36.123 227 113 11 1 206 173 388 3.01e-31 123
MS.gene031385.t1 MTR_8g023900 40.252 159 86 5 9 162 7 161 3.49e-29 117
MS.gene031385.t1 MTR_8g023930 35.545 211 110 10 14 215 24 217 1.38e-29 119
MS.gene031385.t1 MTR_8g023860 40.909 154 74 6 14 159 12 156 1.95e-29 117
MS.gene031385.t1 MTR_8g093790 35.294 204 107 7 10 213 6 184 1.83e-25 101
MS.gene031385.t1 MTR_8g023880 39.053 169 74 7 13 162 6 164 5.83e-25 102
MS.gene031385.t1 MTR_7g070140 56.790 81 33 1 67 145 17 97 9.26e-23 92.8
MS.gene031385.t1 MTR_3g096400 30.952 210 117 6 12 207 5 200 2.75e-21 90.9
MS.gene031385.t1 MTR_7g083360 31.206 141 88 5 10 144 6 143 3.61e-18 80.9
MS.gene031385.t1 MTR_7g083330 32.558 129 81 4 12 137 16 141 6.21e-14 70.1
MS.gene031385.t1 MTR_7g070150 53.448 58 24 1 111 168 9 63 3.94e-13 65.1
MS.gene031385.t1 MTR_8g102240 32.895 152 76 5 12 139 45 194 4.99e-12 67.4
MS.gene031385.t1 MTR_8g102240 32.895 152 76 5 12 139 45 194 5.00e-12 67.4
MS.gene031385.t1 MTR_7g116460 35.714 154 83 9 20 163 11 158 6.38e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene031385.t1 AT4G27410 78.636 220 46 1 1 220 1 219 8.63e-124 358
MS.gene031385.t1 AT1G52890 57.061 347 116 9 1 345 1 316 4.73e-121 352
MS.gene031385.t1 AT4G27410 72.996 237 46 2 1 220 1 236 2.39e-119 348
MS.gene031385.t1 AT3G15500 68.924 251 71 4 1 247 1 248 9.36e-118 343
MS.gene031385.t1 AT3G04070 62.694 193 57 5 6 185 4 194 2.23e-76 239
MS.gene031385.t1 AT1G01720 65.341 176 55 3 12 182 5 179 4.12e-76 236
MS.gene031385.t1 AT5G63790 59.162 191 69 3 10 195 46 232 2.87e-74 233
MS.gene031385.t1 AT5G63790 59.162 191 69 3 10 195 56 242 4.66e-74 232
MS.gene031385.t1 AT5G08790 64.072 167 54 2 10 171 3 168 5.06e-74 231
MS.gene031385.t1 AT1G61110 66.477 176 43 4 14 175 16 189 4.58e-73 230
MS.gene031385.t1 AT1G77450 65.432 162 52 2 10 168 6 166 7.08e-73 227
MS.gene031385.t1 AT3G04070 57.895 209 57 6 6 185 4 210 1.94e-72 229
MS.gene031385.t1 AT1G69490 62.963 162 56 1 10 167 5 166 6.62e-71 223
MS.gene031385.t1 AT3G15510 64.417 163 45 3 18 167 21 183 1.01e-69 223
MS.gene031385.t1 AT3G18400 43.388 242 128 3 14 248 5 244 1.12e-62 203
MS.gene031385.t1 AT1G52880 63.125 160 47 2 18 165 21 180 3.72e-61 199
MS.gene031385.t1 AT1G65910 48.990 198 96 3 9 202 1 197 6.93e-59 201
MS.gene031385.t1 AT5G07680 52.105 190 86 3 1 188 4 190 8.63e-59 193
MS.gene031385.t1 AT3G17730 46.114 193 92 3 9 198 1 184 3.02e-58 189
MS.gene031385.t1 AT5G61430 45.726 234 108 5 11 225 13 246 3.49e-58 192
MS.gene031385.t1 AT2G02450 52.874 174 79 2 16 188 53 224 1.03e-57 192
MS.gene031385.t1 AT2G02450 52.874 174 79 2 16 188 53 224 1.71e-57 192
MS.gene031385.t1 AT5G07680 53.631 179 78 3 12 188 1 176 2.28e-57 189
MS.gene031385.t1 AT2G24430 55.625 160 68 2 13 170 15 173 3.23e-57 189
MS.gene031385.t1 AT2G24430 55.625 160 68 2 13 170 15 173 3.23e-57 189
MS.gene031385.t1 AT3G03200 48.691 191 91 3 9 196 1 187 6.96e-57 192
MS.gene031385.t1 AT5G18270 49.505 202 95 4 12 210 19 216 1.99e-56 187
MS.gene031385.t1 AT5G17260 53.049 164 74 2 9 169 1 164 3.27e-56 191
MS.gene031385.t1 AT5G39610 49.749 199 84 4 11 195 17 213 1.02e-55 184
MS.gene031385.t1 AT1G26870 50.811 185 79 4 5 177 7 191 1.23e-55 187
MS.gene031385.t1 AT5G18270 48.515 202 97 4 12 210 19 216 1.68e-55 185
MS.gene031385.t1 AT2G43000 54.194 155 70 1 16 169 20 174 1.09e-54 181
MS.gene031385.t1 AT5G39820 49.730 185 68 4 16 175 22 206 1.11e-54 183
MS.gene031385.t1 AT3G04060 49.505 202 90 5 12 210 18 210 2.94e-54 182
MS.gene031385.t1 AT2G33480 57.143 154 63 1 12 165 13 163 6.91e-54 179
MS.gene031385.t1 AT4G10350 51.974 152 70 1 14 162 9 160 1.08e-53 180
MS.gene031385.t1 AT5G53950 56.051 157 65 2 14 166 17 173 4.23e-53 180
MS.gene031385.t1 AT2G18060 48.171 164 80 2 7 167 2 163 5.69e-53 179
MS.gene031385.t1 AT2G18060 48.171 164 80 2 7 167 2 163 5.69e-53 179
MS.gene031385.t1 AT2G33480 57.143 154 61 2 12 165 13 161 6.80e-53 176
MS.gene031385.t1 AT1G71930 42.640 197 103 3 7 195 2 196 7.13e-53 177
MS.gene031385.t1 AT1G71930 42.640 197 103 3 7 195 2 196 7.13e-53 177
MS.gene031385.t1 AT1G33280 52.632 152 66 2 14 162 8 156 1.73e-52 176
MS.gene031385.t1 AT1G79580 54.140 157 65 3 10 162 13 166 2.03e-52 178
MS.gene031385.t1 AT1G79580 54.140 157 65 3 10 162 13 166 2.03e-52 178
MS.gene031385.t1 AT1G79580 54.140 157 65 3 10 162 13 166 2.03e-52 178
MS.gene031385.t1 AT1G79580 54.140 157 65 3 10 162 13 166 2.03e-52 178
MS.gene031385.t1 AT1G79580 54.140 157 65 3 10 162 13 166 2.03e-52 178
MS.gene031385.t1 AT1G54330 52.866 157 69 2 9 163 1 154 3.81e-52 175
MS.gene031385.t1 AT5G46590 55.195 154 65 3 14 163 6 159 4.10e-52 175
MS.gene031385.t1 AT3G29035 53.750 160 72 1 11 168 21 180 6.90e-52 175
MS.gene031385.t1 AT5G13180 56.604 159 63 4 12 168 12 166 9.29e-52 172
MS.gene031385.t1 AT3G15170 53.896 154 67 2 14 163 20 173 2.67e-51 173
MS.gene031385.t1 AT4G17980 53.750 160 60 4 14 163 6 161 4.42e-51 171
MS.gene031385.t1 AT4G17980 52.121 165 65 4 9 163 1 161 6.64e-51 172
MS.gene031385.t1 AT1G32510 43.182 220 100 5 14 208 6 225 9.84e-51 171
MS.gene031385.t1 AT4G36160 51.634 153 69 2 13 162 13 163 1.18e-50 174
MS.gene031385.t1 AT4G36160 51.634 153 69 2 13 162 9 159 1.28e-50 173
MS.gene031385.t1 AT4G36160 51.634 153 69 2 13 162 9 159 1.28e-50 173
MS.gene031385.t1 AT1G56010 46.875 160 81 2 9 164 14 173 1.84e-50 171
MS.gene031385.t1 AT5G66300 50.000 156 74 2 13 165 11 165 1.97e-50 170
MS.gene031385.t1 AT1G12260 50.641 156 72 2 14 166 7 160 2.12e-50 172
MS.gene031385.t1 AT3G12977 46.541 159 84 1 9 166 13 171 2.40e-50 170
MS.gene031385.t1 AT1G12260 50.641 156 72 2 14 166 7 160 3.59e-50 172
MS.gene031385.t1 AT3G10480 50.633 158 76 1 9 164 22 179 3.71e-50 174
MS.gene031385.t1 AT1G76420 48.837 172 77 3 1 162 1 171 4.49e-50 171
MS.gene031385.t1 AT5G62380 51.974 152 68 2 14 162 7 156 7.40e-50 171
MS.gene031385.t1 AT5G62380 51.974 152 68 2 14 162 7 156 7.40e-50 171
MS.gene031385.t1 AT1G33060 48.466 163 82 1 9 169 19 181 1.53e-49 176
MS.gene031385.t1 AT1G33060 48.466 163 82 1 9 169 19 181 1.54e-49 176
MS.gene031385.t1 AT1G32770 45.604 182 85 3 10 177 12 193 2.18e-49 169
MS.gene031385.t1 AT1G62700 50.641 156 72 2 14 166 7 160 2.46e-49 170
MS.gene031385.t1 AT1G62700 50.641 156 72 2 14 166 7 160 2.46e-49 170
MS.gene031385.t1 AT5G46590 56.028 141 59 2 14 151 6 146 2.54e-49 167
MS.gene031385.t1 AT2G46770 41.038 212 106 3 10 202 12 223 8.32e-49 168
MS.gene031385.t1 AT3G10480 50.314 159 76 2 9 164 22 180 1.03e-48 170
MS.gene031385.t1 AT3G10500 50.000 158 77 1 13 168 8 165 1.71e-48 171
MS.gene031385.t1 AT4G35580 45.408 196 99 3 13 206 8 197 1.86e-48 171
MS.gene031385.t1 AT4G35580 45.408 196 99 3 13 206 8 197 1.89e-48 171
MS.gene031385.t1 AT4G35580 45.408 196 99 3 13 206 8 197 2.11e-48 171
MS.gene031385.t1 AT5G04410 50.000 158 77 1 13 168 8 165 5.15e-48 171
MS.gene031385.t1 AT5G24590 42.929 198 105 3 4 198 3 195 5.47e-48 168
MS.gene031385.t1 AT3G10490 50.323 155 74 2 13 164 26 180 6.99e-48 162
MS.gene031385.t1 AT3G10490 50.000 158 70 3 13 164 26 180 4.22e-47 166
MS.gene031385.t1 AT3G61910 43.478 184 88 3 10 177 7 190 1.37e-46 162
MS.gene031385.t1 AT2G17040 40.909 220 116 5 16 229 8 219 4.84e-46 158
MS.gene031385.t1 AT3G12910 38.783 263 123 9 4 237 15 268 4.14e-45 157
MS.gene031385.t1 AT3G49530 47.134 157 80 2 9 162 8 164 5.34e-45 159
MS.gene031385.t1 AT1G34180 45.161 155 83 1 16 168 18 172 8.92e-45 159
MS.gene031385.t1 AT3G49530 47.134 157 80 2 9 162 8 164 1.58e-44 159
MS.gene031385.t1 AT2G27300 38.009 221 110 5 9 210 9 221 4.19e-44 155
MS.gene031385.t1 AT1G34180 45.161 155 83 1 16 168 18 172 4.78e-44 160
MS.gene031385.t1 AT5G64060 44.586 157 85 1 9 163 1 157 5.12e-44 155
MS.gene031385.t1 AT3G10480 43.085 188 71 3 13 164 26 213 6.47e-44 159
MS.gene031385.t1 AT1G34190 43.871 155 85 1 16 168 18 172 7.04e-44 159
MS.gene031385.t1 AT5G22290 41.304 184 92 5 16 192 23 197 9.23e-44 154
MS.gene031385.t1 AT1G34180 42.515 167 82 1 16 168 18 184 2.40e-42 153
MS.gene031385.t1 AT3G44290 43.396 159 78 3 16 169 16 167 4.25e-42 147
MS.gene031385.t1 AT4G28530 45.556 180 72 6 1 162 1 172 4.43e-42 150
MS.gene031385.t1 AT1G34180 42.515 167 82 1 16 168 18 184 1.07e-41 154
MS.gene031385.t1 AT3G44290 43.396 159 78 3 16 169 16 167 2.38e-41 148
MS.gene031385.t1 AT5G09330 42.675 157 88 1 9 163 1 157 5.55e-41 150
MS.gene031385.t1 AT5G09330 42.675 157 88 1 9 163 1 157 5.55e-41 150
MS.gene031385.t1 AT5G09330 42.675 157 88 1 9 163 1 157 5.55e-41 150
MS.gene031385.t1 AT5G09330 42.675 157 88 1 9 163 1 157 5.55e-41 150
MS.gene031385.t1 AT5G09330 42.675 157 88 1 9 163 1 157 5.55e-41 150
MS.gene031385.t1 AT1G32870 50.314 159 73 3 14 168 10 166 7.69e-41 150
MS.gene031385.t1 AT1G32870 50.314 159 73 3 14 168 10 166 8.50e-41 150
MS.gene031385.t1 AT1G32870 50.314 159 73 3 14 168 46 202 1.49e-40 150
MS.gene031385.t1 AT5G61430 42.857 182 85 5 63 225 2 183 1.78e-35 130
MS.gene031385.t1 AT4G10350 55.208 96 43 0 67 162 18 113 1.20e-33 126
MS.gene031385.t1 AT1G56010 51.429 105 48 1 63 164 2 106 2.10e-33 125
MS.gene031385.t1 AT5G64530 39.306 173 77 4 12 168 1 161 3.40e-33 122
MS.gene031385.t1 AT2G33480 57.576 99 42 0 67 165 8 106 6.50e-33 122
MS.gene031385.t1 AT3G44350 40.491 163 86 5 14 167 5 165 9.68e-33 122
MS.gene031385.t1 AT3G12977 52.427 103 48 1 63 164 14 116 1.83e-32 121
MS.gene031385.t1 AT5G22380 37.245 196 111 8 17 201 8 202 6.09e-31 117
MS.gene031385.t1 AT5G04395 42.857 147 66 3 10 139 24 169 1.46e-30 115
MS.gene031385.t1 AT5G64530 44.697 132 59 3 12 141 1 120 3.66e-30 113
MS.gene031385.t1 AT3G44350 42.029 138 70 4 14 143 5 140 1.62e-29 111
MS.gene031385.t1 AT4G01550 37.714 175 90 7 17 182 7 171 1.27e-26 110
MS.gene031385.t1 AT3G04420 41.732 127 70 2 15 137 4 130 2.90e-26 106
MS.gene031385.t1 AT2G43000 50.526 95 46 1 76 169 2 96 3.76e-26 103
MS.gene031385.t1 AT4G28530 35.758 165 51 3 14 162 10 135 5.87e-26 106
MS.gene031385.t1 AT3G04420 41.732 127 70 2 15 137 4 130 6.02e-26 106
MS.gene031385.t1 AT4G01520 35.632 174 97 6 15 178 5 173 9.07e-25 102
MS.gene031385.t1 AT4G27410 62.069 87 32 1 134 220 1 86 2.07e-24 98.2
MS.gene031385.t1 AT4G01540 36.047 172 95 6 17 178 7 173 2.34e-24 103
MS.gene031385.t1 AT4G01540 36.047 172 95 6 17 178 7 173 2.75e-24 102
MS.gene031385.t1 AT4G01540 36.257 171 94 6 17 177 7 172 3.77e-24 102
MS.gene031385.t1 AT4G01540 36.257 171 94 6 17 177 7 172 3.89e-24 103
MS.gene031385.t1 AT1G02230 41.538 130 66 5 15 137 4 130 3.56e-23 99.4
MS.gene031385.t1 AT1G02250 35.503 169 95 5 12 173 1 162 3.26e-22 96.7
MS.gene031385.t1 AT1G02220 37.692 130 74 3 12 137 1 127 4.72e-21 94.0
MS.gene031385.t1 AT3G56530 36.601 153 92 4 11 160 49 199 1.31e-20 91.7
MS.gene031385.t1 AT3G10490 49.367 79 39 1 87 164 2 80 2.75e-20 91.3
MS.gene031385.t1 AT3G10490 49.367 79 39 1 87 164 2 80 2.75e-20 91.3
MS.gene031385.t1 AT2G18060 47.368 76 38 1 92 167 2 75 9.17e-19 85.5
MS.gene031385.t1 AT5G50820 37.226 137 70 5 12 142 15 141 5.12e-18 81.6
MS.gene031385.t1 AT3G55210 34.161 161 88 5 14 160 11 167 6.58e-18 83.2
MS.gene031385.t1 AT5G22290 39.623 106 49 4 93 192 2 98 3.30e-17 80.5
MS.gene031385.t1 AT1G01010 34.146 164 85 8 17 166 6 160 3.31e-17 82.8
MS.gene031385.t1 AT5G14000 31.646 158 97 4 12 165 13 163 2.48e-16 77.4
MS.gene031385.t1 AT5G14000 34.615 130 81 2 12 139 13 140 8.74e-16 74.3
MS.gene031385.t1 AT3G04430 35.606 132 71 5 20 138 6 136 4.57e-12 65.1
MS.gene031385.t1 AT4G28500 34.641 153 80 6 14 148 59 209 2.98e-11 63.9
MS.gene031385.t1 AT4G29230 31.210 157 81 5 8 139 42 196 5.12e-11 64.3

Find 84 sgRNAs with CRISPR-Local

Find 125 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAAAGGCACCAAAACTAAT+TGG 0.246600 2.1:-20138580 MS.gene031385:CDS
CCGGTTCAACCGGTTGGATT+TGG 0.265550 2.1:-20137358 MS.gene031385:CDS
CCAGATCCAGCTACTCTATT+TGG 0.287866 2.1:+20138698 None:intergenic
CTGCTTGAAACGACGCCATT+TGG 0.294519 2.1:+20137889 None:intergenic
ATGCATAATCCAATTAGTTT+TGG 0.307345 2.1:+20138571 None:intergenic
GATTCATCTTCTCTTCTTGT+TGG 0.315390 2.1:+20137728 None:intergenic
CTAATCCGGTTGACCCGTTT+GGG 0.322735 2.1:-20137390 MS.gene031385:CDS
TGCTGCAAATAATAATTTCA+TGG 0.328047 2.1:-20137692 MS.gene031385:CDS
TGTTATAATCTTGTCTGTTC+CGG 0.334569 2.1:+20138661 None:intergenic
CTATTTGGCCTAGTCCCATT+TGG 0.338304 2.1:+20138713 None:intergenic
TTTGGATACTTCCTATCTCT+TGG 0.340923 2.1:+20138731 None:intergenic
CCAAATCCAACCGGTTGAAC+CGG 0.359372 2.1:+20137358 None:intergenic
ATTGGACACTTCCGTTATTA+CGG 0.370558 2.1:-20137545 MS.gene031385:CDS
ACTAATCCGGTTGACCCGTT+TGG 0.373818 2.1:-20137391 MS.gene031385:CDS
GAAACGACGCCATTTGGAAT+AGG 0.376235 2.1:+20137895 None:intergenic
AACCAAGTTGAGAATTCGTC+TGG 0.381998 2.1:-20137460 MS.gene031385:CDS
CCAAATAGAGTAGCTGGATC+TGG 0.382299 2.1:-20138698 MS.gene031385:CDS
CTTCCTATCCGGTTCATTGT+TGG 0.391276 2.1:+20137332 None:intergenic
TGTCCCCACATTATGTCAAT+TGG 0.393100 2.1:-20137563 MS.gene031385:CDS
TTGAATTGCAGCTAGATGAT+TGG 0.399386 2.1:-20137960 MS.gene031385:intron
TGAATTGCAGCTAGATGATT+GGG 0.406156 2.1:-20137959 MS.gene031385:intron
ACAAATGAAGGTAGAAAAGT+TGG 0.415542 2.1:-20138641 MS.gene031385:CDS
ATTTCTTTAGTCCAAGAGAT+AGG 0.426397 2.1:-20138742 MS.gene031385:CDS
CTAAACCCAAACGGGTCAAC+CGG 0.428969 2.1:+20137385 None:intergenic
CCCGTTTGGGTTTAGATACC+CGG 0.440772 2.1:-20137377 MS.gene031385:CDS
CAAATAATAATTTCATGGAT+TGG 0.446522 2.1:-20137687 MS.gene031385:CDS
GAGTAGCTGGATCTGGGTAT+TGG 0.458403 2.1:-20138691 MS.gene031385:CDS
GTTTAGATACCCGGTTCAAC+CGG 0.466337 2.1:-20137368 MS.gene031385:CDS
TCCTCTTCAGTCGGATGCAC+GGG 0.469154 2.1:+20137505 None:intergenic
AGAGATAGGAAGTATCCAAA+TGG 0.473419 2.1:-20138728 MS.gene031385:CDS
TATGTTGGTAAAGCTCCTAA+AGG 0.483857 2.1:-20138596 MS.gene031385:CDS
ACTAGGCCAAATAGAGTAGC+TGG 0.487807 2.1:-20138704 MS.gene031385:CDS
TGGGGACAGAAGGGACATAA+AGG 0.491862 2.1:+20137578 None:intergenic
AAGCAATGGTCGTCAATTTG+TGG 0.495194 2.1:+20137793 None:intergenic
AACAAGAAGCTCTTCATCAG+TGG 0.495470 2.1:+20139039 None:intergenic
ATCTCTACAAATTCGACCCA+TGG 0.496775 2.1:-20138955 MS.gene031385:CDS
CCGGGTATCTAAACCCAAAC+GGG 0.497333 2.1:+20137377 None:intergenic
ACCGGGTATCTAAACCCAAA+CGG 0.506194 2.1:+20137376 None:intergenic
GACAAGATTATAACAAATGA+AGG 0.510810 2.1:-20138653 MS.gene031385:CDS
TGACATAATGTGGGGACAGA+AGG 0.514449 2.1:+20137568 None:intergenic
CAAATAGAGTAGCTGGATCT+GGG 0.514453 2.1:-20138697 MS.gene031385:CDS
TGTTGGAATCCAAATCCAAC+CGG 0.518411 2.1:+20137349 None:intergenic
TATCTATGTCGTAAAGTAGC+TGG 0.519439 2.1:-20139013 MS.gene031385:CDS
TTCAAGAACGTCGTCGAGGT+GGG 0.522480 2.1:+20137822 None:intergenic
CAAATCCAACCGGTTGAACC+GGG 0.522706 2.1:+20137359 None:intergenic
AGTGTCCAATTGACATAATG+TGG 0.525796 2.1:+20137558 None:intergenic
CTCCTCTTCAGTCGGATGCA+CGG 0.528695 2.1:+20137504 None:intergenic
GGAAGTATCCAAATGGGACT+AGG 0.531933 2.1:-20138721 MS.gene031385:CDS
GAGATAGGAAGTATCCAAAT+GGG 0.536430 2.1:-20138727 MS.gene031385:CDS
ACCCAGACGAATTCTCAACT+TGG 0.539808 2.1:+20137458 None:intergenic
AACTCACTTGGAAGAACCCA+TGG 0.541829 2.1:+20138938 None:intergenic
ATTCAAGAACGTCGTCGAGG+TGG 0.545842 2.1:+20137821 None:intergenic
CTTTGAACCTCCTCTTCAGT+CGG 0.546459 2.1:+20137496 None:intergenic
AGGTATGGGATACACTAATC+CGG 0.551375 2.1:-20137404 MS.gene031385:CDS
CACGTGGCAGCTTGAAGCAA+TGG 0.554810 2.1:+20137779 None:intergenic
GCACAATTGAGTTTACCTCC+TGG 0.560444 2.1:-20139076 MS.gene031385:CDS
ACAAGAAGCTCTTCATCAGT+GGG 0.569952 2.1:+20139040 None:intergenic
AGATACCCGGTTCAACCGGT+TGG 0.574244 2.1:-20137364 MS.gene031385:CDS
GACATAATGTGGGGACAGAA+GGG 0.579791 2.1:+20137569 None:intergenic
TTTCAAGACGGTCAAACTCA+AGG 0.582786 2.1:-20137628 MS.gene031385:CDS
GGTAAACTCAATTGTGCAAG+AGG 0.592070 2.1:+20139082 None:intergenic
TATAATCTTGTCTGTTCCGG+TGG 0.597425 2.1:+20138664 None:intergenic
TCTGGGTATTGGAAAGCCAC+CGG 0.602092 2.1:-20138680 MS.gene031385:CDS
CTGAAGAGGAGGTTCAAAGT+GGG 0.606883 2.1:-20137492 MS.gene031385:CDS
TCTCTACAAATTCGACCCAT+GGG 0.608644 2.1:-20138954 MS.gene031385:CDS
GTGTCCAATTGACATAATGT+GGG 0.609196 2.1:+20137559 None:intergenic
ACCAAGTTGAGAATTCGTCT+GGG 0.609603 2.1:-20137459 MS.gene031385:CDS
ACGTGTCAACTCGCTAAGAA+CGG 0.615896 2.1:-20137761 MS.gene031385:CDS
ACCCGTGCATCCGACTGAAG+AGG 0.627654 2.1:-20137506 MS.gene031385:CDS
CGTGCATCCGACTGAAGAGG+AGG 0.634276 2.1:-20137503 MS.gene031385:CDS
GTGGGGTAAAATCTAAAACC+AGG 0.636836 2.1:+20139058 None:intergenic
ACTGAAGAGGAGGTTCAAAG+TGG 0.641217 2.1:-20137493 MS.gene031385:CDS
GTGATTCAAGAACGTCGTCG+AGG 0.650602 2.1:+20137818 None:intergenic
GACTCTTCACGAAACAACGG+TGG 0.660789 2.1:-20138533 MS.gene031385:CDS
GTTCTTAGCGAGTTGACACG+TGG 0.662417 2.1:+20137763 None:intergenic
CTTGACTCTTCACGAAACAA+CGG 0.662587 2.1:-20138536 MS.gene031385:CDS
TGAAGAGGAGGTTCAAAGTG+GGG 0.669043 2.1:-20137491 MS.gene031385:CDS
GAATACACTCAATACAGCAA+CGG 0.669213 2.1:-20137865 MS.gene031385:CDS
ACAGTAACAGGGTTTCAAGA+CGG 0.683973 2.1:-20137640 MS.gene031385:CDS
ACGAAACAACGGTGGCACCA+AGG 0.687136 2.1:-20138525 MS.gene031385:intron
ACTCACTTGGAAGAACCCAT+GGG 0.692817 2.1:+20138939 None:intergenic
TGTCCAATTGACATAATGTG+GGG 0.696814 2.1:+20137560 None:intergenic
GGGTAAAATCTAAAACCAGG+AGG 0.717933 2.1:+20139061 None:intergenic
CAAGAAGCTCTTCATCAGTG+GGG 0.743838 2.1:+20139041 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTTTAATATAAATAAACCAT+AGG + chr2.1:20137633-20137652 None:intergenic 15.0%
!!! ATATTTTAAAATGGAACAAA+AGG + chr2.1:20138373-20138392 None:intergenic 15.0%
!!! TATTACAAAGAATTTTATCT+AGG - chr2.1:20138065-20138084 MS.gene031385:intron 15.0%
!!! TTAAAAAAGAGTTTGATAAT+TGG + chr2.1:20138314-20138333 None:intergenic 15.0%
!! AATAATCCCATAAAACAATT+TGG + chr2.1:20138430-20138449 None:intergenic 20.0%
!! CAAATAATAATTTCATGGAT+TGG - chr2.1:20138761-20138780 MS.gene031385:CDS 20.0%
!! GAATTGTGAAATAAATAATG+TGG + chr2.1:20138346-20138365 None:intergenic 20.0%
!! GATTTAAATAATTGTACCTA+TGG - chr2.1:20137614-20137633 MS.gene031385:CDS 20.0%
!! GTCAATATTTGATATTTCAA+AGG - chr2.1:20138191-20138210 MS.gene031385:intron 20.0%
!! TAAAATTTGTGATCATGATT+AGG + chr2.1:20138275-20138294 None:intergenic 20.0%
!!! AAATGATTTTAATCAAGGTA+TGG - chr2.1:20139029-20139048 MS.gene031385:CDS 20.0%
!!! AATGATTTTAATCAAGGTAT+GGG - chr2.1:20139030-20139049 MS.gene031385:CDS 20.0%
!!! AGGAAGTGAATATTTTAAAA+TGG + chr2.1:20138382-20138401 None:intergenic 20.0%
!!! ATTTGTTTTTGTTAGAATCA+CGG - chr2.1:20137580-20137599 MS.gene031385:CDS 20.0%
!!! GTTTTACCAAATTGTTTTAT+GGG - chr2.1:20138421-20138440 MS.gene031385:intron 20.0%
!!! TGTTTTACCAAATTGTTTTA+TGG - chr2.1:20138420-20138439 MS.gene031385:intron 20.0%
! AAATAAATAATGTGGTGACA+AGG + chr2.1:20138338-20138357 None:intergenic 25.0%
! ATGAATGTCATATAATACCT+TGG + chr2.1:20137943-20137962 None:intergenic 25.0%
! CAATTTGGTAAAACAGTAAA+AGG + chr2.1:20138415-20138434 None:intergenic 25.0%
! GACAAGATTATAACAAATGA+AGG - chr2.1:20137795-20137814 MS.gene031385:CDS 25.0%
! TGCTGCAAATAATAATTTCA+TGG - chr2.1:20138756-20138775 MS.gene031385:CDS 25.0%
! TTAAAAAATTGGGTGATACA+TGG - chr2.1:20138139-20138158 MS.gene031385:intron 25.0%
!!! AAAGCACTTGTTTTTTATGT+TGG - chr2.1:20137837-20137856 MS.gene031385:CDS 25.0%
!!! ATGCATAATCCAATTAGTTT+TGG + chr2.1:20137880-20137899 None:intergenic 25.0%
!!! GGTTCAAATGATTTTAATCA+AGG - chr2.1:20139024-20139043 MS.gene031385:CDS 25.0%
ACAAATGAAGGTAGAAAAGT+TGG - chr2.1:20137807-20137826 MS.gene031385:CDS 30.0%
ATAAACGTGTACGAAATAGT+TGG + chr2.1:20137543-20137562 None:intergenic 30.0%
ATTTCTTTAGTCCAAGAGAT+AGG - chr2.1:20137706-20137725 MS.gene031385:CDS 30.0%
TAGGCTGATGATTTGAAAAT+GGG - chr2.1:20138084-20138103 MS.gene031385:intron 30.0%
TGTTATAATCTTGTCTGTTC+CGG + chr2.1:20137790-20137809 None:intergenic 30.0%
! AAGAGTTTGATAATTGGCAA+AGG + chr2.1:20138308-20138327 None:intergenic 30.0%
! AGAGTTTGATAATTGGCAAA+GGG + chr2.1:20138307-20138326 None:intergenic 30.0%
! CAAGGAATGATGAATTTTAG+TGG - chr2.1:20138838-20138857 MS.gene031385:intron 30.0%
!! GTGATTAATTTGTGTAGGTA+AGG - chr2.1:20137659-20137678 MS.gene031385:CDS 30.0%
!! TGTGTGTGATTAATTTGTGT+AGG - chr2.1:20137654-20137673 MS.gene031385:CDS 30.0%
!!! CAATTTTTGGTGAGAAAGAA+TGG - chr2.1:20137682-20137701 MS.gene031385:CDS 30.0%
AGTGTCCAATTGACATAATG+TGG + chr2.1:20138893-20138912 None:intergenic 35.0%
ATTGGACACTTCCGTTATTA+CGG - chr2.1:20138903-20138922 MS.gene031385:intron 35.0%
CAGTAAAAGGTCAAAAACAG+AGG + chr2.1:20138402-20138421 None:intergenic 35.0%
CTAGGCTGATGATTTGAAAA+TGG - chr2.1:20138083-20138102 MS.gene031385:intron 35.0%
GAATACACTCAATACAGCAA+CGG - chr2.1:20138583-20138602 MS.gene031385:CDS 35.0%
GATTCATCTTCTCTTCTTGT+TGG + chr2.1:20138723-20138742 None:intergenic 35.0%
GCACAAAAACCTATTCCAAA+TGG - chr2.1:20138544-20138563 MS.gene031385:CDS 35.0%
GTGTCCAATTGACATAATGT+GGG + chr2.1:20138892-20138911 None:intergenic 35.0%
TATCTATGTCGTAAAGTAGC+TGG - chr2.1:20137435-20137454 MS.gene031385:CDS 35.0%
TGAATTGCAGCTAGATGATT+GGG - chr2.1:20138489-20138508 MS.gene031385:intron 35.0%
TGTCCAATTGACATAATGTG+GGG + chr2.1:20138891-20138910 None:intergenic 35.0%
TTGAATTGCAGCTAGATGAT+TGG - chr2.1:20138488-20138507 MS.gene031385:intron 35.0%
TTTGGATACTTCCTATCTCT+TGG + chr2.1:20137720-20137739 None:intergenic 35.0%
! CGATTTTGAACACAGTAACA+GGG - chr2.1:20138797-20138816 MS.gene031385:intron 35.0%
! TATGTTGGTAAAGCTCCTAA+AGG - chr2.1:20137852-20137871 MS.gene031385:CDS 35.0%
! TCGATTTTGAACACAGTAAC+AGG - chr2.1:20138796-20138815 MS.gene031385:intron 35.0%
! TGTGTAGGTAAGGCAATTTT+TGG - chr2.1:20137669-20137688 MS.gene031385:CDS 35.0%
!! AGAGATAGGAAGTATCCAAA+TGG - chr2.1:20137720-20137739 MS.gene031385:CDS 35.0%
!! CTAAAGGCACCAAAACTAAT+TGG - chr2.1:20137868-20137887 MS.gene031385:CDS 35.0%
!! GAGATAGGAAGTATCCAAAT+GGG - chr2.1:20137721-20137740 MS.gene031385:CDS 35.0%
!!! CAATTAGTTTTGGTGCCTTT+AGG + chr2.1:20137870-20137889 None:intergenic 35.0%
!!! GCTAGTTTTCTCCGTAATAA+CGG + chr2.1:20138917-20138936 None:intergenic 35.0%
AACAAGAAGCTCTTCATCAG+TGG + chr2.1:20137412-20137431 None:intergenic 40.0%
AAGCAATGGTCGTCAATTTG+TGG + chr2.1:20138658-20138677 None:intergenic 40.0%
ACAAGAAGCTCTTCATCAGT+GGG + chr2.1:20137411-20137430 None:intergenic 40.0%
ACAGTAACAGGGTTTCAAGA+CGG - chr2.1:20138808-20138827 MS.gene031385:intron 40.0%
AGGTATGGGATACACTAATC+CGG - chr2.1:20139044-20139063 MS.gene031385:CDS 40.0%
ATCTCTACAAATTCGACCCA+TGG - chr2.1:20137493-20137512 MS.gene031385:CDS 40.0%
CAAATAGAGTAGCTGGATCT+GGG - chr2.1:20137751-20137770 MS.gene031385:CDS 40.0%
CTTGACTCTTCACGAAACAA+CGG - chr2.1:20137912-20137931 MS.gene031385:CDS 40.0%
GGTAAACTCAATTGTGCAAG+AGG + chr2.1:20137369-20137388 None:intergenic 40.0%
TATAATCTTGTCTGTTCCGG+TGG + chr2.1:20137787-20137806 None:intergenic 40.0%
TCTCTACAAATTCGACCCAT+GGG - chr2.1:20137494-20137513 MS.gene031385:CDS 40.0%
TGTCCCCACATTATGTCAAT+TGG - chr2.1:20138885-20138904 MS.gene031385:intron 40.0%
TGTTGGAATCCAAATCCAAC+CGG + chr2.1:20139102-20139121 None:intergenic 40.0%
TTTCAAGACGGTCAAACTCA+AGG - chr2.1:20138820-20138839 MS.gene031385:intron 40.0%
! AACCAAGTTGAGAATTCGTC+TGG - chr2.1:20138988-20139007 MS.gene031385:CDS 40.0%
! ACCAAGTTGAGAATTCGTCT+GGG - chr2.1:20138989-20139008 MS.gene031385:CDS 40.0%
! GGGTAAAATCTAAAACCAGG+AGG + chr2.1:20137390-20137409 None:intergenic 40.0%
! GTGGGGTAAAATCTAAAACC+AGG + chr2.1:20137393-20137412 None:intergenic 40.0%
! GTTGGTGAAGTTAACTCACT+TGG + chr2.1:20137525-20137544 None:intergenic 40.0%
AACTCACTTGGAAGAACCCA+TGG + chr2.1:20137513-20137532 None:intergenic 45.0%
ACCCAGACGAATTCTCAACT+TGG + chr2.1:20138993-20139012 None:intergenic 45.0%
ACCGGGTATCTAAACCCAAA+CGG + chr2.1:20139075-20139094 None:intergenic 45.0%
ACGTGTCAACTCGCTAAGAA+CGG - chr2.1:20138687-20138706 MS.gene031385:CDS 45.0%
ACTAGGCCAAATAGAGTAGC+TGG - chr2.1:20137744-20137763 MS.gene031385:CDS 45.0%
ACTCACTTGGAAGAACCCAT+GGG + chr2.1:20137512-20137531 None:intergenic 45.0%
ACTGAAGAGGAGGTTCAAAG+TGG - chr2.1:20138955-20138974 MS.gene031385:CDS 45.0%
CAAGAAGCTCTTCATCAGTG+GGG + chr2.1:20137410-20137429 None:intergenic 45.0%
CCAAATAGAGTAGCTGGATC+TGG - chr2.1:20137750-20137769 MS.gene031385:CDS 45.0%
CCAGATCCAGCTACTCTATT+TGG + chr2.1:20137753-20137772 None:intergenic 45.0%
CTATTTGGCCTAGTCCCATT+TGG + chr2.1:20137738-20137757 None:intergenic 45.0%
CTGAAGAGGAGGTTCAAAGT+GGG - chr2.1:20138956-20138975 MS.gene031385:CDS 45.0%
CTTTGAACCTCCTCTTCAGT+CGG + chr2.1:20138955-20138974 None:intergenic 45.0%
GACATAATGTGGGGACAGAA+GGG + chr2.1:20138882-20138901 None:intergenic 45.0%
GCACAATTGAGTTTACCTCC+TGG - chr2.1:20137372-20137391 MS.gene031385:CDS 45.0%
GTTTAGATACCCGGTTCAAC+CGG - chr2.1:20139080-20139099 MS.gene031385:CDS 45.0%
TGAAGAGGAGGTTCAAAGTG+GGG - chr2.1:20138957-20138976 MS.gene031385:CDS 45.0%
TGACATAATGTGGGGACAGA+AGG + chr2.1:20138883-20138902 None:intergenic 45.0%
! GAAACGACGCCATTTGGAAT+AGG + chr2.1:20138556-20138575 None:intergenic 45.0%
!! GGAAGTATCCAAATGGGACT+AGG - chr2.1:20137727-20137746 MS.gene031385:CDS 45.0%
!!! TCGTCTGGGTTTTTTCAACG+CGG - chr2.1:20139003-20139022 MS.gene031385:CDS 45.0%
!!! AACAAATTTTTTTAAAAAAT+TGG - chr2.1:20138128-20138147 MS.gene031385:intron 5.0%
!!! ACAAATTTTTTTAAAAAATT+GGG - chr2.1:20138129-20138148 MS.gene031385:intron 5.0%
!!! TATTTATTATTTTTTTAAGA+AGG + chr2.1:20138238-20138257 None:intergenic 5.0%
ACTAATCCGGTTGACCCGTT+TGG - chr2.1:20139057-20139076 MS.gene031385:CDS 50.0%
ATTCAAGAACGTCGTCGAGG+TGG + chr2.1:20138630-20138649 None:intergenic 50.0%
CAAATCCAACCGGTTGAACC+GGG + chr2.1:20139092-20139111 None:intergenic 50.0%
CCAAATCCAACCGGTTGAAC+CGG + chr2.1:20139093-20139112 None:intergenic 50.0%
CCGGGTATCTAAACCCAAAC+GGG + chr2.1:20139074-20139093 None:intergenic 50.0%
CTAAACCCAAACGGGTCAAC+CGG + chr2.1:20139066-20139085 None:intergenic 50.0%
CTAATCCGGTTGACCCGTTT+GGG - chr2.1:20139058-20139077 MS.gene031385:CDS 50.0%
CTGCTTGAAACGACGCCATT+TGG + chr2.1:20138562-20138581 None:intergenic 50.0%
GACTCTTCACGAAACAACGG+TGG - chr2.1:20137915-20137934 MS.gene031385:CDS 50.0%
GAGTAGCTGGATCTGGGTAT+TGG - chr2.1:20137757-20137776 MS.gene031385:CDS 50.0%
GTGATTCAAGAACGTCGTCG+AGG + chr2.1:20138633-20138652 None:intergenic 50.0%
TGGGGACAGAAGGGACATAA+AGG + chr2.1:20138873-20138892 None:intergenic 50.0%
TTCAAGAACGTCGTCGAGGT+GGG + chr2.1:20138629-20138648 None:intergenic 50.0%
! CCCGTTTGGGTTTAGATACC+CGG - chr2.1:20139071-20139090 MS.gene031385:CDS 50.0%
! GTTCTTAGCGAGTTGACACG+TGG + chr2.1:20138688-20138707 None:intergenic 50.0%
!! TCTGGGTATTGGAAAGCCAC+CGG - chr2.1:20137768-20137787 MS.gene031385:CDS 50.0%
ACGAAACAACGGTGGCACCA+AGG - chr2.1:20137923-20137942 MS.gene031385:CDS 55.0%
AGATACCCGGTTCAACCGGT+TGG - chr2.1:20139084-20139103 MS.gene031385:CDS 55.0%
CACGTGGCAGCTTGAAGCAA+TGG + chr2.1:20138672-20138691 None:intergenic 55.0%
CCGGTTCAACCGGTTGGATT+TGG - chr2.1:20139090-20139109 MS.gene031385:CDS 55.0%
CTCCTCTTCAGTCGGATGCA+CGG + chr2.1:20138947-20138966 None:intergenic 55.0%
TCCTCTTCAGTCGGATGCAC+GGG + chr2.1:20138946-20138965 None:intergenic 55.0%
ACCCGTGCATCCGACTGAAG+AGG - chr2.1:20138942-20138961 MS.gene031385:intron 60.0%
CGTGCATCCGACTGAAGAGG+AGG - chr2.1:20138945-20138964 MS.gene031385:CDS 60.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 20137345 20139125 20137345 ID=MS.gene031385
chr2.1 mRNA 20137345 20139125 20137345 ID=MS.gene031385.t1;Parent=MS.gene031385
chr2.1 exon 20138945 20139125 20138945 ID=MS.gene031385.t1.exon1;Parent=MS.gene031385.t1
chr2.1 CDS 20138945 20139125 20138945 ID=cds.MS.gene031385.t1;Parent=MS.gene031385.t1
chr2.1 exon 20138526 20138794 20138526 ID=MS.gene031385.t1.exon2;Parent=MS.gene031385.t1
chr2.1 CDS 20138526 20138794 20138526 ID=cds.MS.gene031385.t1;Parent=MS.gene031385.t1
chr2.1 exon 20137345 20137971 20137345 ID=MS.gene031385.t1.exon3;Parent=MS.gene031385.t1
chr2.1 CDS 20137345 20137971 20137345 ID=cds.MS.gene031385.t1;Parent=MS.gene031385.t1
Gene Sequence

>MS.gene031385

ATGGGAATTCAAGACAAAGATCCTCTTGCACAATTGAGTTTACCTCCTGGTTTTAGATTTTACCCCACTGATGAAGAGCTTCTTGTTCAATATCTATGTCGTAAAGTAGCTGGTCATCATTTTTCTCTTCAAATCATTGCTGAAATTGATCTCTACAAATTCGACCCATGGGTTCTTCCAAGTGAGTTAACTTCACCAACTATTTCGTACACGTTTATGTTTGATATCACAACGAATTTGTTTTTGTTAGAATCACGGTGAATCATCGTGATTTAAATAATTGTACCTATGGTTTATTTATATTAAAGTTGTGTGTGATTAATTTGTGTAGGTAAGGCAATTTTTGGTGAGAAAGAATGGTATTTCTTTAGTCCAAGAGATAGGAAGTATCCAAATGGGACTAGGCCAAATAGAGTAGCTGGATCTGGGTATTGGAAAGCCACCGGAACAGACAAGATTATAACAAATGAAGGTAGAAAAGTTGGTATAAAAAAAGCACTTGTTTTTTATGTTGGTAAAGCTCCTAAAGGCACCAAAACTAATTGGATTATGCATGAGTATCGACTACTTGACTCTTCACGAAACAACGGTGGCACCAAGGTATTATATGACATTCATTTTTTTTTGTTACTATTTAACTATTTCAAATGTCTAAATTTAGCATTACTAATTTTTACTTAGTATATACACAAATAATTTTAAATTGATCACAATTCTCAATATTACAAAGAATTTTATCTAGGCTGATGATTTGAAAATGGGCAATCAAATATTGAGAATCACAACAAATTTTTTTAAAAAATTGGGTGATACATGGTTTTAAATGAATTGCACTCATACATACACGTCAATATTTGATATTTCAAAGGATTAATATTAAATTTTTTTCTCCTTCTTAAAAAAATAATAAATATTTTTTTAATAATTCCTAATCATGATCACAAATTTTATTTTTGAAACCCTTTGCCAATTATCAAACTCTTTTTTAAACCTTGTCACCACATTATTTATTTCACAATTCACTTCCTTTTGTTCCATTTTAAAATATTCACTTCCTCTGTTTTTGACCTTTTACTGTTTTACCAAATTGTTTTATGGGATTATTATTATTATTACAACGTTAATTTGTTGAAATTTTTGTTCTTGAATTGCAGCTAGATGATTGGGTTCTATGTCGTATCTACAAGAAAAATTCAAGTGCACAAAAACCTATTCCAAATGGCGTCGTTTCAAGCAGAGAATACACTCAATACAGCAACGGTTCATCGTCTTCTTCATCATCCCACCTCGACGACGTTCTTGAATCACTTCCACAAATTGACGACCATTGCTTCAAGCTGCCACGTGTCAACTCGCTAAGAACGGCGCAACATCACCAACAAGAAGAGAAGATGAATCTTCAAAATTTAAATGCTGCAAATAATAATTTCATGGATTGGTCTAATTCATCATCGATTTTGAACACAGTAACAGGGTTTCAAGACGGTCAAACTCAAGGAATGATGAATTTTAGTGGTTGCAATGACCTTTATGTCCCTTCTGTCCCCACATTATGTCAATTGGACACTTCCGTTATTACGGAGAAAACTAGCAAGATACCCGTGCATCCGACTGAAGAGGAGGTTCAAAGTGGGGCGAGAGCAAACCAAGTTGAGAATTCGTCTGGGTTTTTTCAACGCGGTTCAAATGATTTTAATCAAGGTATGGGATACACTAATCCGGTTGACCCGTTTGGGTTTAGATACCCGGTTCAACCGGTTGGATTTGGATTCCAACAATGA
Protein sequence

>MS.gene031385.t1

MGIQDKDPLAQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLQIIAEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGTRPNRVAGSGYWKATGTDKIITNEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLLDSSRNNGGTKLDDWVLCRIYKKNSSAQKPIPNGVVSSREYTQYSNGSSSSSSSHLDDVLESLPQIDDHCFKLPRVNSLRTAQHHQQEEKMNLQNLNAANNNFMDWSNSSSILNTVTGFQDGQTQGMMNFSGCNDLYVPSVPTLCQLDTSVITEKTSKIPVHPTEEEVQSGARANQVENSSGFFQRGSNDFNQGMGYTNPVDPFGFRYPVQPVGFGFQQ