Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03158.t1 | XP_024632961.1 | 74.5 | 800 | 39 | 4 | 1 | 635 | 1 | 800 | 0.00E+00 | 1078.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03158.t1 | Q9SZL8 | 24.9 | 594 | 303 | 14 | 50 | 528 | 72 | 637 | 4.9e-45 | 184.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03158.t1 | D3YBB9 | 64.9 | 737 | 106 | 4 | 44 | 627 | 76 | 812 | 2.9e-261 | 910.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene03158.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03158.t1 | MTR_0558s0020 | 89.068 | 311 | 19 | 1 | 1 | 311 | 1 | 296 | 0.0 | 580 |
MS.gene03158.t1 | MTR_1g083640 | 93.706 | 286 | 18 | 0 | 1 | 286 | 1 | 286 | 0.0 | 568 |
MS.gene03158.t1 | MTR_8g446020 | 77.170 | 311 | 16 | 2 | 1 | 311 | 1 | 256 | 5.34e-166 | 474 |
MS.gene03158.t1 | MTR_6g090505 | 62.814 | 398 | 112 | 4 | 81 | 478 | 1 | 362 | 6.23e-165 | 476 |
MS.gene03158.t1 | MTR_2g014100 | 88.142 | 253 | 21 | 2 | 1 | 252 | 1 | 245 | 7.70e-159 | 456 |
MS.gene03158.t1 | MTR_0337s0040 | 73.188 | 276 | 20 | 2 | 1 | 276 | 1 | 222 | 1.43e-133 | 391 |
MS.gene03158.t1 | MTR_3g008240 | 83.945 | 218 | 20 | 1 | 1 | 218 | 1 | 203 | 4.93e-128 | 375 |
MS.gene03158.t1 | MTR_4g040430 | 84.404 | 218 | 14 | 2 | 1 | 218 | 1 | 198 | 2.57e-127 | 374 |
MS.gene03158.t1 | MTR_5g071590 | 86.885 | 183 | 21 | 1 | 1 | 183 | 1 | 180 | 3.78e-113 | 337 |
MS.gene03158.t1 | MTR_1g055240 | 94.366 | 142 | 8 | 0 | 107 | 248 | 3 | 144 | 5.89e-94 | 286 |
MS.gene03158.t1 | MTR_0019s0290 | 88.889 | 153 | 14 | 1 | 100 | 249 | 8 | 160 | 4.87e-93 | 284 |
MS.gene03158.t1 | MTR_3g028680 | 81.013 | 158 | 27 | 1 | 481 | 635 | 1 | 158 | 4.08e-84 | 262 |
MS.gene03158.t1 | MTR_2g067090 | 81.935 | 155 | 25 | 1 | 484 | 635 | 99 | 253 | 1.92e-81 | 259 |
MS.gene03158.t1 | MTR_4g133495 | 66.298 | 181 | 32 | 3 | 439 | 613 | 88 | 245 | 4.08e-70 | 229 |
MS.gene03158.t1 | MTR_4g133340 | 66.298 | 181 | 32 | 3 | 439 | 613 | 88 | 245 | 4.08e-70 | 229 |
MS.gene03158.t1 | MTR_1281s0010 | 95.413 | 109 | 5 | 0 | 35 | 143 | 1 | 109 | 4.62e-69 | 220 |
MS.gene03158.t1 | MTR_0337s0060 | 55.814 | 172 | 17 | 3 | 454 | 622 | 124 | 239 | 1.93e-46 | 164 |
MS.gene03158.t1 | MTR_6g051425 | 30.818 | 318 | 189 | 6 | 56 | 357 | 22 | 324 | 7.08e-40 | 149 |
MS.gene03158.t1 | MTR_8g046060 | 79.167 | 96 | 11 | 2 | 1 | 95 | 91 | 178 | 9.52e-38 | 140 |
MS.gene03158.t1 | MTR_2g067130 | 88.462 | 78 | 9 | 0 | 558 | 635 | 46 | 123 | 1.80e-37 | 137 |
MS.gene03158.t1 | MTR_4g008820 | 76.842 | 95 | 7 | 1 | 1 | 95 | 125 | 204 | 2.08e-35 | 142 |
MS.gene03158.t1 | MTR_1g070355 | 24.756 | 307 | 210 | 5 | 3 | 307 | 24 | 311 | 6.82e-21 | 97.4 |
MS.gene03158.t1 | MTR_0337s0050 | 80.556 | 36 | 7 | 0 | 275 | 310 | 14 | 49 | 7.05e-15 | 70.5 |
MS.gene03158.t1 | MTR_0402s0040 | 25.946 | 185 | 118 | 4 | 65 | 249 | 40 | 205 | 1.26e-13 | 73.9 |
MS.gene03158.t1 | MTR_1g013060 | 30.093 | 216 | 132 | 8 | 56 | 269 | 29 | 227 | 2.05e-13 | 70.5 |
MS.gene03158.t1 | MTR_4g035820 | 23.019 | 265 | 179 | 5 | 56 | 315 | 80 | 324 | 1.44e-11 | 68.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03158.t1 | AT4G38180 | 27.294 | 425 | 254 | 9 | 50 | 444 | 72 | 471 | 2.55e-42 | 164 |
MS.gene03158.t1 | AT3G06250 | 25.641 | 429 | 226 | 11 | 39 | 440 | 178 | 540 | 6.38e-33 | 135 |
MS.gene03158.t1 | AT3G06250 | 25.641 | 429 | 226 | 11 | 39 | 440 | 178 | 540 | 6.38e-33 | 135 |
MS.gene03158.t1 | AT3G06250 | 25.641 | 429 | 226 | 11 | 39 | 440 | 178 | 540 | 6.38e-33 | 135 |
MS.gene03158.t1 | AT5G28530 | 25.116 | 430 | 262 | 10 | 56 | 447 | 60 | 467 | 8.14e-32 | 131 |
MS.gene03158.t1 | AT5G28530 | 25.116 | 430 | 262 | 10 | 56 | 447 | 60 | 467 | 8.15e-32 | 131 |
MS.gene03158.t1 | AT5G28530 | 25.116 | 430 | 262 | 10 | 56 | 447 | 60 | 467 | 8.15e-32 | 131 |
MS.gene03158.t1 | AT5G18960 | 24.769 | 432 | 233 | 13 | 37 | 440 | 197 | 564 | 5.02e-29 | 123 |
MS.gene03158.t1 | AT5G18960 | 24.769 | 432 | 233 | 13 | 37 | 440 | 197 | 564 | 5.02e-29 | 123 |
MS.gene03158.t1 | AT4G15090 | 25.369 | 406 | 252 | 10 | 66 | 444 | 66 | 447 | 4.12e-28 | 120 |
MS.gene03158.t1 | AT4G15090 | 31.383 | 188 | 109 | 5 | 456 | 637 | 547 | 720 | 4.88e-17 | 85.9 |
MS.gene03158.t1 | AT4G15090 | 25.369 | 406 | 252 | 10 | 66 | 444 | 66 | 447 | 4.12e-28 | 120 |
MS.gene03158.t1 | AT4G15090 | 31.383 | 188 | 109 | 5 | 456 | 637 | 547 | 720 | 4.88e-17 | 85.9 |
MS.gene03158.t1 | AT4G15090 | 25.369 | 406 | 252 | 10 | 66 | 444 | 66 | 447 | 4.12e-28 | 120 |
MS.gene03158.t1 | AT4G15090 | 31.383 | 188 | 109 | 5 | 456 | 637 | 547 | 720 | 4.88e-17 | 85.9 |
MS.gene03158.t1 | AT4G15090 | 25.369 | 406 | 252 | 10 | 66 | 444 | 66 | 447 | 4.12e-28 | 120 |
MS.gene03158.t1 | AT4G15090 | 31.383 | 188 | 109 | 5 | 456 | 637 | 547 | 720 | 4.88e-17 | 85.9 |
MS.gene03158.t1 | AT4G15090 | 25.369 | 406 | 252 | 10 | 66 | 444 | 66 | 447 | 4.12e-28 | 120 |
MS.gene03158.t1 | AT4G15090 | 31.383 | 188 | 109 | 5 | 456 | 637 | 547 | 720 | 4.88e-17 | 85.9 |
MS.gene03158.t1 | AT1G80010 | 26.545 | 437 | 246 | 16 | 57 | 455 | 101 | 500 | 1.71e-27 | 118 |
MS.gene03158.t1 | AT1G10240 | 23.515 | 421 | 264 | 13 | 56 | 443 | 53 | 448 | 5.22e-27 | 117 |
MS.gene03158.t1 | AT1G10240 | 23.515 | 421 | 264 | 13 | 56 | 443 | 53 | 448 | 5.22e-27 | 117 |
MS.gene03158.t1 | AT2G27110 | 27.984 | 243 | 143 | 4 | 229 | 444 | 181 | 418 | 8.69e-27 | 116 |
MS.gene03158.t1 | AT2G27110 | 29.861 | 144 | 91 | 4 | 476 | 619 | 537 | 670 | 1.54e-11 | 68.2 |
MS.gene03158.t1 | AT2G27110 | 27.984 | 243 | 143 | 4 | 229 | 444 | 181 | 418 | 8.69e-27 | 116 |
MS.gene03158.t1 | AT2G27110 | 29.861 | 144 | 91 | 4 | 476 | 619 | 537 | 670 | 1.54e-11 | 68.2 |
MS.gene03158.t1 | AT2G27110 | 27.984 | 243 | 143 | 4 | 229 | 444 | 36 | 273 | 1.35e-26 | 115 |
MS.gene03158.t1 | AT2G27110 | 29.530 | 149 | 95 | 4 | 476 | 624 | 392 | 530 | 1.42e-11 | 68.2 |
MS.gene03158.t1 | AT4G38170 | 28.507 | 221 | 123 | 5 | 251 | 444 | 24 | 236 | 2.90e-26 | 114 |
MS.gene03158.t1 | AT1G76320 | 24.638 | 414 | 246 | 12 | 57 | 440 | 3 | 380 | 8.19e-26 | 113 |
MS.gene03158.t1 | AT1G76320 | 24.519 | 416 | 248 | 12 | 55 | 440 | 1 | 380 | 9.03e-26 | 113 |
MS.gene03158.t1 | AT1G76320 | 24.519 | 416 | 248 | 12 | 55 | 440 | 1 | 380 | 9.03e-26 | 113 |
MS.gene03158.t1 | AT1G76320 | 24.519 | 416 | 248 | 12 | 55 | 440 | 1 | 380 | 9.08e-26 | 113 |
MS.gene03158.t1 | AT2G32250 | 26.901 | 342 | 182 | 9 | 24 | 363 | 13 | 288 | 7.41e-24 | 107 |
MS.gene03158.t1 | AT2G32250 | 26.901 | 342 | 182 | 9 | 24 | 363 | 13 | 288 | 8.04e-24 | 107 |
MS.gene03158.t1 | AT2G32250 | 26.901 | 342 | 182 | 9 | 24 | 363 | 13 | 288 | 8.04e-24 | 107 |
MS.gene03158.t1 | AT2G32250 | 26.901 | 342 | 182 | 9 | 24 | 363 | 13 | 288 | 8.72e-24 | 107 |
MS.gene03158.t1 | AT2G32250 | 26.901 | 342 | 182 | 9 | 24 | 363 | 13 | 288 | 8.72e-24 | 107 |
MS.gene03158.t1 | AT2G32250 | 26.901 | 342 | 182 | 9 | 24 | 363 | 13 | 288 | 8.72e-24 | 107 |
MS.gene03158.t1 | AT2G32250 | 27.508 | 309 | 158 | 8 | 57 | 363 | 3 | 247 | 2.13e-23 | 105 |
MS.gene03158.t1 | AT2G32250 | 27.508 | 309 | 158 | 8 | 57 | 363 | 3 | 247 | 2.22e-23 | 105 |
MS.gene03158.t1 | AT3G22170 | 21.831 | 426 | 268 | 10 | 48 | 444 | 67 | 456 | 3.26e-23 | 105 |
MS.gene03158.t1 | AT3G22170 | 21.831 | 426 | 268 | 10 | 48 | 444 | 67 | 456 | 3.26e-23 | 105 |
MS.gene03158.t1 | AT1G52520 | 23.888 | 427 | 258 | 13 | 57 | 456 | 91 | 477 | 2.45e-22 | 102 |
MS.gene03158.t1 | AT4G19990 | 23.373 | 415 | 245 | 10 | 57 | 444 | 41 | 409 | 5.68e-22 | 101 |
MS.gene03158.t1 | AT4G19990 | 37.113 | 97 | 51 | 3 | 456 | 552 | 511 | 597 | 3.37e-11 | 67.0 |
MS.gene03158.t1 | AT4G19990 | 23.373 | 415 | 245 | 10 | 57 | 444 | 27 | 395 | 5.79e-22 | 101 |
MS.gene03158.t1 | AT4G19990 | 37.113 | 97 | 51 | 3 | 456 | 552 | 497 | 583 | 3.39e-11 | 67.0 |
MS.gene03158.t1 | AT4G19990 | 23.373 | 415 | 245 | 10 | 57 | 444 | 27 | 395 | 5.79e-22 | 101 |
MS.gene03158.t1 | AT4G19990 | 37.113 | 97 | 51 | 3 | 456 | 552 | 497 | 583 | 3.39e-11 | 67.0 |
MS.gene03158.t1 | AT4G19990 | 23.373 | 415 | 245 | 10 | 57 | 444 | 27 | 395 | 6.68e-22 | 101 |
MS.gene03158.t1 | AT4G19990 | 37.113 | 97 | 51 | 3 | 456 | 552 | 497 | 583 | 3.63e-11 | 67.0 |
MS.gene03158.t1 | AT4G19990 | 23.373 | 415 | 245 | 10 | 57 | 444 | 27 | 395 | 6.87e-22 | 101 |
MS.gene03158.t1 | AT4G19990 | 37.113 | 97 | 51 | 3 | 456 | 552 | 497 | 583 | 3.37e-11 | 67.0 |
MS.gene03158.t1 | AT4G19990 | 23.373 | 415 | 245 | 10 | 57 | 444 | 27 | 395 | 6.87e-22 | 101 |
MS.gene03158.t1 | AT4G19990 | 37.113 | 97 | 51 | 3 | 456 | 552 | 497 | 583 | 3.37e-11 | 67.0 |
MS.gene03158.t1 | AT4G19990 | 27.848 | 237 | 140 | 5 | 235 | 444 | 106 | 338 | 1.73e-20 | 96.7 |
MS.gene03158.t1 | AT4G19990 | 37.113 | 97 | 51 | 3 | 456 | 552 | 440 | 526 | 3.11e-11 | 67.0 |
Find 85 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGTCGCTTCTTTGACTTAAT+TGG | 0.149305 | 2.1:+61797665 | None:intergenic |
TAAATTTCAGCTGCCTTTAT+TGG | 0.156227 | 2.1:-61799075 | MS.gene03158:intron |
AATCGTCTGTGGTTTCTTAT+TGG | 0.195298 | 2.1:+61798948 | None:intergenic |
TTCTTTGACTTAATTGGATT+TGG | 0.266522 | 2.1:+61797671 | None:intergenic |
TCTGTTGTTGGCCTGTTGTT+AGG | 0.292589 | 2.1:+61800146 | None:intergenic |
CGATCATGATCTTCAAAACT+TGG | 0.305304 | 2.1:+61798187 | None:intergenic |
TTACTTCTCGAAATGATCTA+AGG | 0.311482 | 2.1:+61799955 | None:intergenic |
CAACTAGATTATTCTCTATT+CGG | 0.323831 | 2.1:-61799639 | MS.gene03158:CDS |
TTGAAGATCTTGGAGTTCTT+AGG | 0.331625 | 2.1:-61798067 | MS.gene03158:CDS |
GCATACGATTTGCGTAAGTT+TGG | 0.338878 | 2.1:+61798671 | None:intergenic |
GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 2.1:+61799589 | None:intergenic |
ATGATTGTCAAAACCAATAA+AGG | 0.357876 | 2.1:+61799062 | None:intergenic |
CTCGACGGTGTTCTTGAAGC+TGG | 0.383392 | 2.1:-61797827 | MS.gene03158:CDS |
AACAATAAATATCGGCCATT+AGG | 0.388497 | 2.1:-61799582 | MS.gene03158:intron |
ACCGAACAAACAATAAATAT+CGG | 0.389395 | 2.1:-61799590 | MS.gene03158:CDS |
GAGAACGTCTTATGAAGTTA+TGG | 0.394356 | 2.1:-61799880 | MS.gene03158:CDS |
TTTGGTCTTTCTTTGAACTT+TGG | 0.398856 | 2.1:+61797689 | None:intergenic |
GAAGGCCTACCTCAGACTTT+AGG | 0.402909 | 2.1:-61798702 | MS.gene03158:CDS |
CATGTCGTATGTTTGAGAAC+AGG | 0.415108 | 2.1:-61798111 | MS.gene03158:CDS |
GTCTTATGAAGTTATGGGTC+AGG | 0.415385 | 2.1:-61799874 | MS.gene03158:CDS |
GAAGTTATGGGTCAGGGAGT+TGG | 0.426260 | 2.1:-61799867 | MS.gene03158:CDS |
CGTTATGTTTGTAACAAAGA+AGG | 0.427485 | 2.1:-61800194 | MS.gene03158:CDS |
GCTGTTGGTGAAACATCTGC+TGG | 0.428855 | 2.1:-61797728 | MS.gene03158:CDS |
CGAGAAGTAAATGAAGTTCA+AGG | 0.430014 | 2.1:-61799942 | MS.gene03158:CDS |
TTGATATCGTTGTGCTTGAC+TGG | 0.433430 | 2.1:+61797919 | None:intergenic |
GAGGAGTTGCTTCTTTCTAA+AGG | 0.437852 | 2.1:-61797794 | MS.gene03158:CDS |
TCCATGATTCTTTATTGCTA+GGG | 0.444266 | 2.1:+61800357 | None:intergenic |
TTCCATGATTCTTTATTGCT+AGG | 0.445442 | 2.1:+61800356 | None:intergenic |
TTCTTTGAACTTTGGTGCGG+TGG | 0.447203 | 2.1:+61797697 | None:intergenic |
GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 2.1:-61800077 | MS.gene03158:CDS |
TATGCATTGGTCTTCAGCTT+GGG | 0.450920 | 2.1:-61798653 | MS.gene03158:CDS |
ATGTGTATAAGATATATAGA+TGG | 0.452819 | 2.1:-61800025 | MS.gene03158:CDS |
ACATCAACTTCATCTGATAG+TGG | 0.459514 | 2.1:-61800482 | MS.gene03158:CDS |
GCTCTTATAAATTCTAAAGC+TGG | 0.462891 | 2.1:-61799912 | MS.gene03158:CDS |
ACCTGTGGACTGTCTGTTGT+TGG | 0.465317 | 2.1:+61800134 | None:intergenic |
AGAACGTCTTATGAAGTTAT+GGG | 0.466325 | 2.1:-61799879 | MS.gene03158:CDS |
GTTTACTTAATCCTAACAAC+AGG | 0.470860 | 2.1:-61800157 | MS.gene03158:CDS |
CGCTTTAAAACATATTGTCC+AGG | 0.471916 | 2.1:+61798010 | None:intergenic |
ATCATGATCGATTTGATGAA+AGG | 0.476999 | 2.1:-61798174 | MS.gene03158:CDS |
GTATGCATTGGTCTTCAGCT+TGG | 0.479582 | 2.1:-61798654 | MS.gene03158:CDS |
TTTAAGTCTGAAAACCGAAA+AGG | 0.483010 | 2.1:+61799828 | None:intergenic |
CTTTCTAAAGGTATTCGTAC+AGG | 0.486879 | 2.1:-61797782 | MS.gene03158:CDS |
GATCATGATCTTCAAAACTT+GGG | 0.487945 | 2.1:+61798188 | None:intergenic |
CATTCTTTGAAGACAATACC+TGG | 0.489494 | 2.1:-61798028 | MS.gene03158:CDS |
GTCTTCAGTGCCAACATTGA+CGG | 0.491796 | 2.1:+61797943 | None:intergenic |
TTGAAGACTTAGATGGCGTC+GGG | 0.493598 | 2.1:+61797759 | None:intergenic |
CTGTTGGTGAAACATCTGCT+GGG | 0.493682 | 2.1:-61797727 | MS.gene03158:CDS |
CCCCTAGCAATAAAGAATCA+TGG | 0.497001 | 2.1:-61800358 | MS.gene03158:CDS |
TCTTTGAACTTTGGTGCGGT+GGG | 0.503874 | 2.1:+61797698 | None:intergenic |
TTACAACCAACCCTTTCCTC+AGG | 0.505082 | 2.1:+61800083 | None:intergenic |
AGCTGGAATATATTTGAAGC+TGG | 0.507410 | 2.1:-61800060 | MS.gene03158:CDS |
ACAAAACAAGAAATCTGATA+AGG | 0.511435 | 2.1:-61800228 | MS.gene03158:CDS |
CTAAGGTAACACGAATGCTC+TGG | 0.517941 | 2.1:+61799972 | None:intergenic |
GTCAGCATGAATCATTGCTA+GGG | 0.522802 | 2.1:+61800397 | None:intergenic |
GGTAATTATGCATATAACAC+TGG | 0.523547 | 2.1:-61800290 | MS.gene03158:CDS |
TAACAAAGAAGGTTTCAAGA+AGG | 0.525236 | 2.1:-61800183 | MS.gene03158:CDS |
TAAGATATATAGATGGGATG+TGG | 0.528498 | 2.1:-61800018 | MS.gene03158:CDS |
GAATGCTCTGGTTTATGTAA+TGG | 0.534744 | 2.1:+61799984 | None:intergenic |
CCATGATTCTTTATTGCTAG+GGG | 0.537011 | 2.1:+61800358 | None:intergenic |
TGTCAGCATGAATCATTGCT+AGG | 0.540740 | 2.1:+61800396 | None:intergenic |
AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 2.1:-61800182 | MS.gene03158:CDS |
GTTATGGGTCAGGGAGTTGG+AGG | 0.547221 | 2.1:-61799864 | MS.gene03158:CDS |
AACACAATAACGCACTAGCC+TGG | 0.552106 | 2.1:+61798917 | None:intergenic |
AAGATCTTGGAGTTCTTAGG+TGG | 0.553166 | 2.1:-61798064 | MS.gene03158:CDS |
ATGTCGTATGTTTGAGAACA+GGG | 0.560861 | 2.1:-61798110 | MS.gene03158:CDS |
GGCCTACCTCAGACTTTAGG+TGG | 0.565384 | 2.1:-61798699 | MS.gene03158:CDS |
TCTTCAAAAGTAGCTGCTGT+TGG | 0.568528 | 2.1:-61797743 | MS.gene03158:CDS |
TTTGAAGACTTAGATGGCGT+CGG | 0.575863 | 2.1:+61797758 | None:intergenic |
ATCATGATCTTCAAAACTTG+GGG | 0.577988 | 2.1:+61798189 | None:intergenic |
ATGAAATCGACCGTCAATGT+TGG | 0.583819 | 2.1:-61797953 | MS.gene03158:CDS |
CTTACGCAAATCGTATGCAT+TGG | 0.597846 | 2.1:-61798666 | MS.gene03158:CDS |
TGTGTATAAGATATATAGAT+GGG | 0.601002 | 2.1:-61800024 | MS.gene03158:CDS |
TCACTGATTCATGCTGAGAG+TGG | 0.606950 | 2.1:-61800437 | MS.gene03158:CDS |
TCTTATGAAGTTATGGGTCA+GGG | 0.609153 | 2.1:-61799873 | MS.gene03158:CDS |
GCCAACAACAGACAGTCCAC+AGG | 0.619933 | 2.1:-61800135 | MS.gene03158:CDS |
TTCACAAACTCAATAACCTG+TGG | 0.626760 | 2.1:+61800119 | None:intergenic |
TGTTGGTGAAACATCTGCTG+GGG | 0.639082 | 2.1:-61797726 | MS.gene03158:CDS |
TGGTCTGTATAAATCGTCTG+TGG | 0.650424 | 2.1:+61798937 | None:intergenic |
GATTTCATCTTATCGACAGA+CGG | 0.652942 | 2.1:+61797968 | None:intergenic |
GACAAGCCACCTAAAGTCTG+AGG | 0.653221 | 2.1:+61798693 | None:intergenic |
TGTCGTATGTTTGAGAACAG+GGG | 0.653807 | 2.1:-61798109 | MS.gene03158:CDS |
TCTTTCTTTGAACTTTGGTG+CGG | 0.659854 | 2.1:+61797694 | None:intergenic |
TCAGCATGAATCATTGCTAG+GGG | 0.681156 | 2.1:+61800398 | None:intergenic |
AGCCACCTAAAGTCTGAGGT+AGG | 0.684957 | 2.1:+61798697 | None:intergenic |
ACAGACGATTTATACAGACC+AGG | 0.720235 | 2.1:-61798935 | MS.gene03158:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTATTTTGATATGATTTAT+TGG | - | chr2.1:61799293-61799312 | MS.gene03158:intron | 10.0% |
!! | AAACCAAAATAATTATCTAA+TGG | + | chr2.1:61799444-61799463 | None:intergenic | 15.0% |
!! | GTTTAACTATTATTGATAAA+TGG | + | chr2.1:61799532-61799551 | None:intergenic | 15.0% |
!!! | AAACCATTAGATAATTATTT+TGG | - | chr2.1:61799438-61799457 | MS.gene03158:intron | 15.0% |
!!! | ATGTATTGATGATTATATTT+TGG | - | chr2.1:61799346-61799365 | MS.gene03158:intron | 15.0% |
!!! | ATTGATTGTTTTTATAAGTT+TGG | - | chr2.1:61799233-61799252 | MS.gene03158:intron | 15.0% |
!!! | TTTTATAAGTTTGGTTTTTT+AGG | - | chr2.1:61799242-61799261 | MS.gene03158:intron | 15.0% |
!!! | TTTTGATGAGTTAAATAATT+TGG | - | chr2.1:61797979-61797998 | MS.gene03158:CDS | 15.0% |
!!! | TTTTTAACAATTTCTTTGTT+TGG | + | chr2.1:61799838-61799857 | None:intergenic | 15.0% |
!! | AAACCATAAGTAGTATTTAA+TGG | + | chr2.1:61799487-61799506 | None:intergenic | 20.0% |
!! | AAACCATTAAATACTACTTA+TGG | - | chr2.1:61799481-61799500 | MS.gene03158:intron | 20.0% |
!! | ACATACTTATTAGAATACTT+AGG | - | chr2.1:61797482-61797501 | MS.gene03158:intron | 20.0% |
!! | ACTTATAAAAACAATCAATC+AGG | + | chr2.1:61799232-61799251 | None:intergenic | 20.0% |
!! | ATGTGTATAAGATATATAGA+TGG | - | chr2.1:61796748-61796767 | MS.gene03158:intron | 20.0% |
!! | CTTATAAAAACAATCAATCA+GGG | + | chr2.1:61799231-61799250 | None:intergenic | 20.0% |
!! | TGAATATCATAGTAAAAAGA+TGG | + | chr2.1:61797062-61797081 | None:intergenic | 20.0% |
!! | TGTGTATAAGATATATAGAT+GGG | - | chr2.1:61796749-61796768 | MS.gene03158:intron | 20.0% |
!!! | AAAGAGATTGAAGATTTTTA+TGG | - | chr2.1:61796462-61796481 | MS.gene03158:intron | 20.0% |
!!! | AATCAGATTTTGACTATAAT+TGG | - | chr2.1:61798020-61798039 | MS.gene03158:CDS | 20.0% |
!!! | ATCAGATTTTGACTATAATT+GGG | - | chr2.1:61798021-61798040 | MS.gene03158:CDS | 20.0% |
!!! | ATGATGATAAATTGTTTTGA+TGG | - | chr2.1:61798049-61798068 | MS.gene03158:CDS | 20.0% |
!!! | TATCACTTTTTCGTAAAAAT+TGG | - | chr2.1:61799571-61799590 | MS.gene03158:intron | 20.0% |
!!! | TTAATTTCATTAAGTTGTTC+TGG | - | chr2.1:61797252-61797271 | MS.gene03158:intron | 20.0% |
!!! | TTCTTATAATTTGTGATTAC+AGG | - | chr2.1:61797545-61797564 | MS.gene03158:intron | 20.0% |
! | ACAAAACAAGAAATCTGATA+AGG | - | chr2.1:61796545-61796564 | MS.gene03158:intron | 25.0% |
! | ACCGAACAAACAATAAATAT+CGG | - | chr2.1:61797183-61797202 | MS.gene03158:intron | 25.0% |
! | AGTAAAAAACACTAACCTAA+TGG | + | chr2.1:61797209-61797228 | None:intergenic | 25.0% |
! | ATGATTGTCAAAACCAATAA+AGG | + | chr2.1:61797714-61797733 | None:intergenic | 25.0% |
! | ATTATGAAAAAGCTAGAGAA+AGG | - | chr2.1:61799139-61799158 | MS.gene03158:intron | 25.0% |
! | CAAACTTAAATGATGTTGAT+TGG | - | chr2.1:61797406-61797425 | MS.gene03158:intron | 25.0% |
! | CAACTAGATTATTCTCTATT+CGG | - | chr2.1:61797134-61797153 | MS.gene03158:intron | 25.0% |
! | CATAATAGTATTTGAAGGAA+AGG | + | chr2.1:61798420-61798439 | None:intergenic | 25.0% |
! | CTTACTTATTTGAACTACAT+GGG | - | chr2.1:61797329-61797348 | MS.gene03158:intron | 25.0% |
! | CTTTAGTCATTTCAACATTA+TGG | - | chr2.1:61798246-61798265 | MS.gene03158:intron | 25.0% |
! | TCTTACTTATTTGAACTACA+TGG | - | chr2.1:61797328-61797347 | MS.gene03158:intron | 25.0% |
! | TTCCTTCAAATACTATTATG+AGG | - | chr2.1:61798420-61798439 | MS.gene03158:intron | 25.0% |
!! | AACTTTGAAAAACTTCTCAA+AGG | + | chr2.1:61798467-61798486 | None:intergenic | 25.0% |
!! | AGAAAAATTTTAGATGACTC+TGG | + | chr2.1:61798928-61798947 | None:intergenic | 25.0% |
!! | ATAACACTGGATTTTCTATT+AGG | - | chr2.1:61796496-61796515 | MS.gene03158:intron | 25.0% |
!! | CAAAGTTTTCACAATTGATA+AGG | - | chr2.1:61798480-61798499 | MS.gene03158:intron | 25.0% |
!! | GAATTTGAGTTTAATGTGAA+TGG | - | chr2.1:61799719-61799738 | MS.gene03158:CDS | 25.0% |
!! | TGTTGTATTTTGTTCTGATA+TGG | - | chr2.1:61797669-61797688 | MS.gene03158:CDS | 25.0% |
!! | TTAACCATGTTGTTTGTTTA+GGG | - | chr2.1:61797353-61797372 | MS.gene03158:intron | 25.0% |
!! | TTCTTTGACTTAATTGGATT+TGG | + | chr2.1:61799105-61799124 | None:intergenic | 25.0% |
!! | TTTAACCATGTTGTTTGTTT+AGG | - | chr2.1:61797352-61797371 | MS.gene03158:intron | 25.0% |
!!! | AAGACATAGCTAGTATTTTT+TGG | - | chr2.1:61797096-61797115 | MS.gene03158:intron | 25.0% |
!!! | ACTTTTTCGTAAAAATTGGA+GGG | - | chr2.1:61799575-61799594 | MS.gene03158:intron | 25.0% |
!!! | ATTTATATTTTGAACTGCCT+AGG | - | chr2.1:61797430-61797449 | MS.gene03158:intron | 25.0% |
!!! | TATTGGTTTTCAGAGTAAAA+TGG | - | chr2.1:61799944-61799963 | MS.gene03158:CDS | 25.0% |
!!! | TCATCTAAAATTTTTCTCGA+CGG | - | chr2.1:61798931-61798950 | MS.gene03158:intron | 25.0% |
!!! | TGATAAATTGTTTTGATGGA+AGG | - | chr2.1:61798053-61798072 | MS.gene03158:CDS | 25.0% |
AAAACACCTGGAAAACTATT+CGG | + | chr2.1:61797887-61797906 | None:intergenic | 30.0% | |
AAACCAATATGCTGTGTAAA+TGG | + | chr2.1:61799933-61799952 | None:intergenic | 30.0% | |
AAACCATTTACACAGCATAT+TGG | - | chr2.1:61799927-61799946 | MS.gene03158:CDS | 30.0% | |
AAATCCCTAAACAAACAACA+TGG | + | chr2.1:61797360-61797379 | None:intergenic | 30.0% | |
AACAAAGAAGGTTTCAAGAA+GGG | - | chr2.1:61796591-61796610 | MS.gene03158:intron | 30.0% | |
AACAATAAATATCGGCCATT+AGG | - | chr2.1:61797191-61797210 | MS.gene03158:intron | 30.0% | |
AATAAATGCAAAGCAAGAAG+GGG | + | chr2.1:61798383-61798402 | None:intergenic | 30.0% | |
AGAACGTCTTATGAAGTTAT+GGG | - | chr2.1:61796894-61796913 | MS.gene03158:intron | 30.0% | |
ATCATGATCTTCAAAACTTG+GGG | + | chr2.1:61798587-61798606 | None:intergenic | 30.0% | |
CGTTATGTTTGTAACAAAGA+AGG | - | chr2.1:61796579-61796598 | MS.gene03158:intron | 30.0% | |
CTCCTCATAATAGTATTTGA+AGG | + | chr2.1:61798425-61798444 | None:intergenic | 30.0% | |
CTTCAAATACTATTATGAGG+AGG | - | chr2.1:61798423-61798442 | MS.gene03158:intron | 30.0% | |
GAATAAATGCAAAGCAAGAA+GGG | + | chr2.1:61798384-61798403 | None:intergenic | 30.0% | |
GAATTTGAGAAACGAGTTAT+TGG | - | chr2.1:61799746-61799765 | MS.gene03158:CDS | 30.0% | |
GAGAATGCAAAGAAAAATCT+TGG | - | chr2.1:61797935-61797954 | MS.gene03158:CDS | 30.0% | |
GATCATGATCTTCAAAACTT+GGG | + | chr2.1:61798588-61798607 | None:intergenic | 30.0% | |
GCCGATATTTATTGTTTGTT+CGG | + | chr2.1:61797187-61797206 | None:intergenic | 30.0% | |
GGTAATTATGCATATAACAC+TGG | - | chr2.1:61796483-61796502 | MS.gene03158:intron | 30.0% | |
GTTTACTTAATCCTAACAAC+AGG | - | chr2.1:61796616-61796635 | MS.gene03158:intron | 30.0% | |
TAAATTTCAGCTGCCTTTAT+TGG | - | chr2.1:61797698-61797717 | MS.gene03158:CDS | 30.0% | |
TAACAAAGAAGGTTTCAAGA+AGG | - | chr2.1:61796590-61796609 | MS.gene03158:intron | 30.0% | |
TAAGATATATAGATGGGATG+TGG | - | chr2.1:61796755-61796774 | MS.gene03158:intron | 30.0% | |
TAAGTTTGTCTCAAACCAAA+TGG | + | chr2.1:61797394-61797413 | None:intergenic | 30.0% | |
TAATAGTTAAACCATGACTC+TGG | - | chr2.1:61799540-61799559 | MS.gene03158:intron | 30.0% | |
TCCATGATTCTTTATTGCTA+GGG | + | chr2.1:61796419-61796438 | None:intergenic | 30.0% | |
TGAATAAATGCAAAGCAAGA+AGG | + | chr2.1:61798385-61798404 | None:intergenic | 30.0% | |
TTACTTCTCGAAATGATCTA+AGG | + | chr2.1:61796821-61796840 | None:intergenic | 30.0% | |
TTCCATGATTCTTTATTGCT+AGG | + | chr2.1:61796420-61796439 | None:intergenic | 30.0% | |
TTTAAGTCTGAAAACCGAAA+AGG | + | chr2.1:61796948-61796967 | None:intergenic | 30.0% | |
! | ATTTAGTTTATGCATTGCTG+AGG | - | chr2.1:61797516-61797535 | MS.gene03158:intron | 30.0% |
! | TATGATGATGCTGATAATGA+CGG | - | chr2.1:61798514-61798533 | MS.gene03158:intron | 30.0% |
! | TTTGGTCTTTCTTTGAACTT+TGG | + | chr2.1:61799087-61799106 | None:intergenic | 30.0% |
! | TTTGTTTCTTCCGATTGATA+AGG | + | chr2.1:61799173-61799192 | None:intergenic | 30.0% |
!! | ATCATGATCGATTTGATGAA+AGG | - | chr2.1:61798599-61798618 | MS.gene03158:intron | 30.0% |
!! | GCTCTTATAAATTCTAAAGC+TGG | - | chr2.1:61796861-61796880 | MS.gene03158:intron | 30.0% |
!!! | CACTTTTTCGTAAAAATTGG+AGG | - | chr2.1:61799574-61799593 | MS.gene03158:intron | 30.0% |
!!! | GACAATATGTTTTAAAGCGT+TGG | - | chr2.1:61798767-61798786 | MS.gene03158:CDS | 30.0% |
!!! | TAGTGTTTTTTACTTCTCTC+AGG | - | chr2.1:61797215-61797234 | MS.gene03158:intron | 30.0% |
AAGAAGAGGGTTTAATGTTG+GGG | + | chr2.1:61799652-61799671 | None:intergenic | 35.0% | |
AATCGTCTGTGGTTTCTTAT+TGG | + | chr2.1:61797828-61797847 | None:intergenic | 35.0% | |
AATTCGTCAAAAAGAGATGG+TGG | - | chr2.1:61796983-61797002 | MS.gene03158:intron | 35.0% | |
ACATCAACTTCATCTGATAG+TGG | - | chr2.1:61796291-61796310 | MS.gene03158:intron | 35.0% | |
ACATTATGGTTCAGAGAATG+AGG | - | chr2.1:61798260-61798279 | MS.gene03158:intron | 35.0% | |
AGAAGAAGAGGGTTTAATGT+TGG | + | chr2.1:61799654-61799673 | None:intergenic | 35.0% | |
AGTAAAAAGATGGTTTCGAG+AGG | + | chr2.1:61797052-61797071 | None:intergenic | 35.0% | |
ATACTAGTTATCCAGAGTCA+TGG | + | chr2.1:61799554-61799573 | None:intergenic | 35.0% | |
ATGTCGTATGTTTGAGAACA+GGG | - | chr2.1:61798663-61798682 | MS.gene03158:CDS | 35.0% | |
ATGTCGTTAGAAGAAGAAGA+GGG | + | chr2.1:61799665-61799684 | None:intergenic | 35.0% | |
CATTATGGTTCAGAGAATGA+GGG | - | chr2.1:61798261-61798280 | MS.gene03158:intron | 35.0% | |
CCATGATTCTTTATTGCTAG+GGG | + | chr2.1:61796418-61796437 | None:intergenic | 35.0% | |
CGAAGTTTACCTTGTCAAAA+CGG | + | chr2.1:61800434-61800453 | None:intergenic | 35.0% | |
CGAGAAGTAAATGAAGTTCA+AGG | - | chr2.1:61796831-61796850 | MS.gene03158:intron | 35.0% | |
CGATCATGATCTTCAAAACT+TGG | + | chr2.1:61798589-61798608 | None:intergenic | 35.0% | |
CTTGCTTTGCATTTATTCAC+AGG | - | chr2.1:61798386-61798405 | MS.gene03158:intron | 35.0% | |
GAAAGAAAAACCTGAGGAAA+GGG | - | chr2.1:61796680-61796699 | MS.gene03158:intron | 35.0% | |
GAAAGTGAAAGAAAAACCTG+AGG | - | chr2.1:61796674-61796693 | MS.gene03158:intron | 35.0% | |
GAAGAAGAGGGTTTAATGTT+GGG | + | chr2.1:61799653-61799672 | None:intergenic | 35.0% | |
GAAGTTTACCTTGTCAAAAC+GGG | + | chr2.1:61800433-61800452 | None:intergenic | 35.0% | |
GACAATTCGTCAAAAAGAGA+TGG | - | chr2.1:61796980-61796999 | MS.gene03158:intron | 35.0% | |
GAGAACGTCTTATGAAGTTA+TGG | - | chr2.1:61796893-61796912 | MS.gene03158:intron | 35.0% | |
GATTTCATCTTATCGACAGA+CGG | + | chr2.1:61798808-61798827 | None:intergenic | 35.0% | |
GGCAGAAATTCCTTATCAAT+CGG | - | chr2.1:61799160-61799179 | MS.gene03158:intron | 35.0% | |
GTAAAAAGATGGTTTCGAGA+GGG | + | chr2.1:61797051-61797070 | None:intergenic | 35.0% | |
TAAAGAATCGAACAAGTGAG+TGG | + | chr2.1:61798231-61798250 | None:intergenic | 35.0% | |
TAAGACCTATAGTCAATCCT+AGG | + | chr2.1:61797313-61797332 | None:intergenic | 35.0% | |
TCCAAAACATCAACATTCGA+AGG | + | chr2.1:61798541-61798560 | None:intergenic | 35.0% | |
TCTTATGAAGTTATGGGTCA+GGG | - | chr2.1:61796900-61796919 | MS.gene03158:intron | 35.0% | |
TCTTTCTTTGAACTTTGGTG+CGG | + | chr2.1:61799082-61799101 | None:intergenic | 35.0% | |
TGAAAGAAAAACCTGAGGAA+AGG | - | chr2.1:61796679-61796698 | MS.gene03158:intron | 35.0% | |
TGTTCTTGAAGCTGGAAAAA+AGG | - | chr2.1:61798954-61798973 | MS.gene03158:CDS | 35.0% | |
TTCACAAACTCAATAACCTG+TGG | + | chr2.1:61796657-61796676 | None:intergenic | 35.0% | |
TTGAAGATCTTGGAGTTCTT+AGG | - | chr2.1:61798706-61798725 | MS.gene03158:CDS | 35.0% | |
! | AGCTGGAATATATTTGAAGC+TGG | - | chr2.1:61796713-61796732 | MS.gene03158:intron | 35.0% |
! | AGTCGCTTCTTTGACTTAAT+TGG | + | chr2.1:61799111-61799130 | None:intergenic | 35.0% |
! | AGTTTTCCAGGTGTTTTTCA+TGG | - | chr2.1:61797890-61797909 | MS.gene03158:CDS | 35.0% |
! | ATGATGATGCTGATAATGAC+GGG | - | chr2.1:61798515-61798534 | MS.gene03158:intron | 35.0% |
! | CATTCTTTGAAGACAATACC+TGG | - | chr2.1:61798745-61798764 | MS.gene03158:CDS | 35.0% |
! | GAAGCTTTATCAGTGATTGT+GGG | - | chr2.1:61799204-61799223 | MS.gene03158:intron | 35.0% |
! | GAATGCTCTGGTTTATGTAA+TGG | + | chr2.1:61796792-61796811 | None:intergenic | 35.0% |
! | GTTTTCCAGGTGTTTTTCAT+GGG | - | chr2.1:61797891-61797910 | MS.gene03158:CDS | 35.0% |
! | TCAATTCCGAATAGTTTTCC+AGG | - | chr2.1:61797878-61797897 | MS.gene03158:CDS | 35.0% |
! | TCTTTCAATGCTTTTCTTCG+TGG | - | chr2.1:61798190-61798209 | MS.gene03158:CDS | 35.0% |
! | TGAAGCTTTATCAGTGATTG+TGG | - | chr2.1:61799203-61799222 | MS.gene03158:intron | 35.0% |
!! | CGCTTTAAAACATATTGTCC+AGG | + | chr2.1:61798766-61798785 | None:intergenic | 35.0% |
!! | CTTTCTAAAGGTATTCGTAC+AGG | - | chr2.1:61798991-61799010 | MS.gene03158:CDS | 35.0% |
!!! | CATCGAAAGAGTGTTTTGTT+TGG | - | chr2.1:61797731-61797750 | MS.gene03158:CDS | 35.0% |
!!! | GCTACTTTTGAAGACTTAGA+TGG | + | chr2.1:61799024-61799043 | None:intergenic | 35.0% |
!!! | GCTAGTATTTTTTGGTCAGA+TGG | - | chr2.1:61797104-61797123 | MS.gene03158:intron | 35.0% |
!!! | TACTCTGAAACCATTTTGCT+GGG | + | chr2.1:61799897-61799916 | None:intergenic | 35.0% |
!!! | TCGACATGTTTTGAAGATCT+TGG | - | chr2.1:61798696-61798715 | MS.gene03158:CDS | 35.0% |
!!! | TTACTCTGAAACCATTTTGC+TGG | + | chr2.1:61799898-61799917 | None:intergenic | 35.0% |
!!! | TTTTTCATGGGCTTTGTTCA+TGG | - | chr2.1:61797903-61797922 | MS.gene03158:CDS | 35.0% |
AAACCATTTCCCCAGCAAAA+TGG | - | chr2.1:61799884-61799903 | MS.gene03158:CDS | 40.0% | |
AACTGCCTAGGATTGACTAT+AGG | - | chr2.1:61797305-61797324 | MS.gene03158:intron | 40.0% | |
AAGATCTTGGAGTTCTTAGG+TGG | - | chr2.1:61798709-61798728 | MS.gene03158:CDS | 40.0% | |
ACAGACGATTTATACAGACC+AGG | - | chr2.1:61797838-61797857 | MS.gene03158:CDS | 40.0% | |
ATGAAATCGACCGTCAATGT+TGG | - | chr2.1:61798820-61798839 | MS.gene03158:CDS | 40.0% | |
ATGAGGAGGACACAACAAAA+GGG | - | chr2.1:61798437-61798456 | MS.gene03158:intron | 40.0% | |
CATGTCGTATGTTTGAGAAC+AGG | - | chr2.1:61798662-61798681 | MS.gene03158:CDS | 40.0% | |
CCCCTAGCAATAAAGAATCA+TGG | - | chr2.1:61796415-61796434 | MS.gene03158:intron | 40.0% | |
CTTACGCAAATCGTATGCAT+TGG | - | chr2.1:61798107-61798126 | MS.gene03158:CDS | 40.0% | |
GAGGAGTTGCTTCTTTCTAA+AGG | - | chr2.1:61798979-61798998 | MS.gene03158:CDS | 40.0% | |
GATGTCGTTAGAAGAAGAAG+AGG | + | chr2.1:61799666-61799685 | None:intergenic | 40.0% | |
GCAAACATAAAGTGAAAGCG+CGG | - | chr2.1:61799609-61799628 | MS.gene03158:CDS | 40.0% | |
GCATACGATTTGCGTAAGTT+TGG | + | chr2.1:61798105-61798124 | None:intergenic | 40.0% | |
GTCAGCATGAATCATTGCTA+GGG | + | chr2.1:61796379-61796398 | None:intergenic | 40.0% | |
GTCTTATGAAGTTATGGGTC+AGG | - | chr2.1:61796899-61796918 | MS.gene03158:intron | 40.0% | |
TATGAGGAGGACACAACAAA+AGG | - | chr2.1:61798436-61798455 | MS.gene03158:intron | 40.0% | |
TCACACAAGACAAAATGCCT+AGG | + | chr2.1:61797450-61797469 | None:intergenic | 40.0% | |
TCAGCATGAATCATTGCTAG+GGG | + | chr2.1:61796378-61796397 | None:intergenic | 40.0% | |
TCTTCAAAAGTAGCTGCTGT+TGG | - | chr2.1:61799030-61799049 | MS.gene03158:CDS | 40.0% | |
TGAGAAACGAGTTATTGGTG+CGG | - | chr2.1:61799751-61799770 | MS.gene03158:CDS | 40.0% | |
TGGTCTGTATAAATCGTCTG+TGG | + | chr2.1:61797839-61797858 | None:intergenic | 40.0% | |
TGTCAGCATGAATCATTGCT+AGG | + | chr2.1:61796380-61796399 | None:intergenic | 40.0% | |
TGTCGTATGTTTGAGAACAG+GGG | - | chr2.1:61798664-61798683 | MS.gene03158:CDS | 40.0% | |
TTGATATCGTTGTGCTTGAC+TGG | + | chr2.1:61798857-61798876 | None:intergenic | 40.0% | |
TTTGAAGACTTAGATGGCGT+CGG | + | chr2.1:61799018-61799037 | None:intergenic | 40.0% | |
! | AAACCATTTTGCTGGGGAAA+TGG | + | chr2.1:61799890-61799909 | None:intergenic | 40.0% |
! | AGGGGTGTACTTGTTTACAA+CGG | + | chr2.1:61798365-61798384 | None:intergenic | 40.0% |
! | ATTTTCTCGCTTCTGCCATT+TGG | - | chr2.1:61797376-61797395 | MS.gene03158:intron | 40.0% |
! | CAAACATAAAGTGAAAGCGC+GGG | - | chr2.1:61799610-61799629 | MS.gene03158:CDS | 40.0% |
! | CAGTACATTTTGAACTGCCT+AGG | - | chr2.1:61797293-61797312 | MS.gene03158:intron | 40.0% |
! | GCACAGAGAATCTTCCTTTT+CGG | - | chr2.1:61796931-61796950 | MS.gene03158:intron | 40.0% |
! | GCCTTCGAATGTTGATGTTT+TGG | - | chr2.1:61798537-61798556 | MS.gene03158:intron | 40.0% |
! | GTCAAGTCACATTTTACAGC+TGG | - | chr2.1:61798142-61798161 | MS.gene03158:CDS | 40.0% |
! | TCATGCTGAGTTGGACTTTA+AGG | - | chr2.1:61798288-61798307 | MS.gene03158:intron | 40.0% |
!! | CTGGTAACGTGGTTTTTGTT+TGG | + | chr2.1:61799988-61800007 | None:intergenic | 40.0% |
!! | TATGCATTGGTCTTCAGCTT+GGG | - | chr2.1:61798120-61798139 | MS.gene03158:CDS | 40.0% |
!! | TTCAGAGCGTTGATTTGCTT+TGG | + | chr2.1:61799866-61799885 | None:intergenic | 40.0% |
!! | TTCAGATCGCTGATTTGCTT+TGG | + | chr2.1:61800246-61800265 | None:intergenic | 40.0% |
!!! | ACTCTGAAACCATTTTGCTG+GGG | + | chr2.1:61799896-61799915 | None:intergenic | 40.0% |
!!! | AGACAGCAGCTACTTTTGAT+TGG | - | chr2.1:61797774-61797793 | MS.gene03158:CDS | 40.0% |
AACACAATAACGCACTAGCC+TGG | + | chr2.1:61797859-61797878 | None:intergenic | 45.0% | |
AATCGAACAAGTGAGTGGTC+TGG | + | chr2.1:61798226-61798245 | None:intergenic | 45.0% | |
CAAAGCCCATGAAAAACACC+TGG | + | chr2.1:61797899-61797918 | None:intergenic | 45.0% | |
CTAAGGTAACACGAATGCTC+TGG | + | chr2.1:61796804-61796823 | None:intergenic | 45.0% | |
CTTTGTGTGTACTCGCTTCA+AGG | - | chr2.1:61800399-61800418 | MS.gene03158:CDS | 45.0% | |
GAAAAACCTGAGGAAAGGGT+TGG | - | chr2.1:61796684-61796703 | MS.gene03158:intron | 45.0% | |
GACAAGGTAAACTTCGCTCA+TGG | - | chr2.1:61800438-61800457 | MS.gene03158:CDS | 45.0% | |
GAGGGATAATCATGCTGAGT+TGG | - | chr2.1:61798279-61798298 | MS.gene03158:intron | 45.0% | |
GTCTTCAGTGCCAACATTGA+CGG | + | chr2.1:61798833-61798852 | None:intergenic | 45.0% | |
GTGCATTTGTTCTAGCAGCA+TGG | + | chr2.1:61800491-61800510 | None:intergenic | 45.0% | |
TGAAGCTGGAAAAAAGGCAG+AGG | - | chr2.1:61798960-61798979 | MS.gene03158:CDS | 45.0% | |
TTACAACCAACCCTTTCCTC+AGG | + | chr2.1:61796693-61796712 | None:intergenic | 45.0% | |
TTGAAGACTTAGATGGCGTC+GGG | + | chr2.1:61799017-61799036 | None:intergenic | 45.0% | |
! | CGTCAAAAAGAGATGGTGGT+TGG | - | chr2.1:61796987-61797006 | MS.gene03158:intron | 45.0% |
! | CTGTTGGTGAAACATCTGCT+GGG | - | chr2.1:61799046-61799065 | MS.gene03158:CDS | 45.0% |
! | TCTGTTGTTGGCCTGTTGTT+AGG | + | chr2.1:61796630-61796649 | None:intergenic | 45.0% |
! | TCTTTGAACTTTGGTGCGGT+GGG | + | chr2.1:61799078-61799097 | None:intergenic | 45.0% |
! | TGTTGGTGAAACATCTGCTG+GGG | - | chr2.1:61799047-61799066 | MS.gene03158:CDS | 45.0% |
! | TTCTTTGAACTTTGGTGCGG+TGG | + | chr2.1:61799079-61799098 | None:intergenic | 45.0% |
!! | CTGAGTTTCCCGTTTTGACA+AGG | - | chr2.1:61800422-61800441 | MS.gene03158:CDS | 45.0% |
!! | GAAAGGGTTGGTTGTAAAGC+TGG | - | chr2.1:61796696-61796715 | MS.gene03158:intron | 45.0% |
!! | GTATGCATTGGTCTTCAGCT+TGG | - | chr2.1:61798119-61798138 | MS.gene03158:CDS | 45.0% |
!! | TCACTGATTCATGCTGAGAG+TGG | - | chr2.1:61796336-61796355 | MS.gene03158:intron | 45.0% |
AAGACAACACCAGTGTGCAC+TGG | - | chr2.1:61799805-61799824 | MS.gene03158:CDS | 50.0% | |
ATCCCAACAGTCAGCTGATG+CGG | - | chr2.1:61798338-61798357 | MS.gene03158:intron | 50.0% | |
GAAGGCCTACCTCAGACTTT+AGG | - | chr2.1:61798071-61798090 | MS.gene03158:CDS | 50.0% | |
GAAGTTATGGGTCAGGGAGT+TGG | - | chr2.1:61796906-61796925 | MS.gene03158:intron | 50.0% | |
GACAAGCCACCTAAAGTCTG+AGG | + | chr2.1:61798083-61798102 | None:intergenic | 50.0% | |
! | ACCTGTGGACTGTCTGTTGT+TGG | + | chr2.1:61796642-61796661 | None:intergenic | 50.0% |
! | AGCCACCTAAAGTCTGAGGT+AGG | + | chr2.1:61798079-61798098 | None:intergenic | 50.0% |
! | GCTGTTGGTGAAACATCTGC+TGG | - | chr2.1:61799045-61799064 | MS.gene03158:CDS | 50.0% |
!! | TGGGCTTTGTTCATGGCACA+TGG | - | chr2.1:61797910-61797929 | MS.gene03158:CDS | 50.0% |
ACCACGTTACCAGTGTGCAC+TGG | - | chr2.1:61799995-61800014 | MS.gene03158:CDS | 55.0% | |
CTCGACGGTGTTCTTGAAGC+TGG | - | chr2.1:61798946-61798965 | MS.gene03158:CDS | 55.0% | |
GACCGCATCAGCTGACTGTT+GGG | + | chr2.1:61798343-61798362 | None:intergenic | 55.0% | |
GCCAACAACAGACAGTCCAC+AGG | - | chr2.1:61796638-61796657 | MS.gene03158:intron | 55.0% | |
GGCCTACCTCAGACTTTAGG+TGG | - | chr2.1:61798074-61798093 | MS.gene03158:CDS | 55.0% | |
GGTAACTCACCAGTGCACAC+TGG | + | chr2.1:61799817-61799836 | None:intergenic | 55.0% | |
GTTATGGGTCAGGGAGTTGG+AGG | - | chr2.1:61796909-61796928 | MS.gene03158:intron | 55.0% | |
! | ACCAGTGCACACTGGTAACG+TGG | + | chr2.1:61799999-61800018 | None:intergenic | 55.0% |
GGACCGCATCAGCTGACTGT+TGG | + | chr2.1:61798344-61798363 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 61796282 | 61800513 | 61796282 | ID=MS.gene03158 |
chr2.1 | mRNA | 61796282 | 61800513 | 61796282 | ID=MS.gene03158.t1;Parent=MS.gene03158 |
chr2.1 | exon | 61799583 | 61800513 | 61799583 | ID=MS.gene03158.t1.exon1;Parent=MS.gene03158.t1 |
chr2.1 | CDS | 61799583 | 61800513 | 61799583 | ID=cds.MS.gene03158.t1;Parent=MS.gene03158.t1 |
chr2.1 | exon | 61798932 | 61799087 | 61798932 | ID=MS.gene03158.t1.exon2;Parent=MS.gene03158.t1 |
chr2.1 | CDS | 61798932 | 61799087 | 61798932 | ID=cds.MS.gene03158.t1;Parent=MS.gene03158.t1 |
chr2.1 | exon | 61798611 | 61798859 | 61798611 | ID=MS.gene03158.t1.exon3;Parent=MS.gene03158.t1 |
chr2.1 | CDS | 61798611 | 61798859 | 61798611 | ID=cds.MS.gene03158.t1;Parent=MS.gene03158.t1 |
chr2.1 | exon | 61797660 | 61798229 | 61797660 | ID=MS.gene03158.t1.exon4;Parent=MS.gene03158.t1 |
chr2.1 | CDS | 61797660 | 61798229 | 61797660 | ID=cds.MS.gene03158.t1;Parent=MS.gene03158.t1 |
chr2.1 | exon | 61796282 | 61796295 | 61796282 | ID=MS.gene03158.t1.exon5;Parent=MS.gene03158.t1 |
chr2.1 | CDS | 61796282 | 61796295 | 61796282 | ID=cds.MS.gene03158.t1;Parent=MS.gene03158.t1 |
Gene Sequence |
Protein sequence |