Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031611.t1 | XP_024636111.1 | 92.5 | 308 | 17 | 2 | 1 | 305 | 1 | 305 | 4.10E-118 | 434.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031611.t1 | Q9LJG8 | 61.0 | 100 | 35 | 2 | 28 | 127 | 81 | 176 | 1.7e-27 | 124.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031611.t1 | A0A396I8C1 | 92.5 | 308 | 17 | 2 | 1 | 305 | 1 | 305 | 3.0e-118 | 434.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene031611.t1 | TF | Trihelix |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031611.t1 | MTR_4g079960 | 93.506 | 308 | 13 | 3 | 1 | 305 | 1 | 304 | 0.0 | 515 |
| MS.gene031611.t1 | MTR_4g079960 | 93.115 | 305 | 15 | 2 | 1 | 302 | 1 | 302 | 0.0 | 512 |
| MS.gene031611.t1 | MTR_4g079960 | 92.508 | 307 | 17 | 2 | 1 | 304 | 1 | 304 | 0.0 | 510 |
| MS.gene031611.t1 | MTR_2g016140 | 49.383 | 324 | 109 | 6 | 19 | 305 | 11 | 316 | 2.01e-88 | 267 |
| MS.gene031611.t1 | MTR_2g016140 | 49.682 | 314 | 104 | 5 | 19 | 295 | 11 | 307 | 3.33e-87 | 264 |
| MS.gene031611.t1 | MTR_8g022290 | 38.966 | 290 | 144 | 7 | 27 | 297 | 64 | 339 | 8.83e-46 | 159 |
| MS.gene031611.t1 | MTR_2g092960 | 34.518 | 394 | 157 | 11 | 8 | 303 | 23 | 413 | 6.93e-40 | 149 |
| MS.gene031611.t1 | MTR_2g102227 | 32.014 | 278 | 132 | 7 | 24 | 293 | 265 | 493 | 1.72e-27 | 111 |
| MS.gene031611.t1 | MTR_1g061600 | 37.255 | 102 | 57 | 3 | 31 | 131 | 133 | 228 | 1.42e-16 | 80.1 |
| MS.gene031611.t1 | MTR_6g486270 | 38.947 | 95 | 52 | 2 | 31 | 124 | 130 | 219 | 2.48e-16 | 79.0 |
| MS.gene031611.t1 | MTR_3g014280 | 26.502 | 283 | 175 | 10 | 26 | 291 | 33 | 299 | 4.07e-15 | 75.1 |
| MS.gene031611.t1 | MTR_4g117990 | 35.922 | 103 | 63 | 2 | 30 | 131 | 43 | 143 | 4.10e-14 | 72.0 |
| MS.gene031611.t1 | MTR_1g037650 | 33.333 | 102 | 60 | 2 | 26 | 127 | 33 | 126 | 5.30e-12 | 63.9 |
| MS.gene031611.t1 | MTR_7g081190 | 41.429 | 70 | 40 | 1 | 30 | 99 | 45 | 113 | 4.01e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031611.t1 | AT3G58630 | 47.416 | 329 | 127 | 9 | 1 | 305 | 1 | 307 | 5.28e-75 | 233 |
| MS.gene031611.t1 | AT3G58630 | 47.416 | 329 | 127 | 9 | 1 | 305 | 1 | 307 | 9.99e-75 | 232 |
| MS.gene031611.t1 | AT3G11100 | 42.160 | 287 | 111 | 9 | 17 | 301 | 13 | 246 | 1.25e-49 | 165 |
| MS.gene031611.t1 | AT5G05550 | 39.636 | 275 | 115 | 5 | 27 | 301 | 20 | 243 | 1.59e-49 | 165 |
| MS.gene031611.t1 | AT5G05550 | 39.209 | 278 | 118 | 5 | 27 | 304 | 20 | 246 | 2.33e-49 | 164 |
| MS.gene031611.t1 | AT5G05550 | 39.636 | 275 | 115 | 5 | 27 | 301 | 20 | 243 | 2.48e-49 | 164 |
| MS.gene031611.t1 | AT3G14180 | 59.615 | 104 | 38 | 2 | 27 | 130 | 80 | 179 | 1.86e-34 | 130 |
| MS.gene031611.t1 | AT1G54060 | 51.485 | 101 | 44 | 2 | 27 | 127 | 90 | 185 | 4.20e-22 | 95.5 |
| MS.gene031611.t1 | AT3G10030 | 39.669 | 121 | 66 | 3 | 16 | 134 | 144 | 259 | 1.49e-20 | 92.0 |
| MS.gene031611.t1 | AT3G10030 | 39.669 | 121 | 66 | 3 | 16 | 134 | 144 | 259 | 1.70e-20 | 92.0 |
| MS.gene031611.t1 | AT3G54390 | 28.223 | 287 | 173 | 9 | 19 | 299 | 23 | 282 | 7.05e-16 | 77.0 |
| MS.gene031611.t1 | AT3G54390 | 28.223 | 287 | 173 | 9 | 19 | 299 | 39 | 298 | 8.98e-16 | 76.6 |
| MS.gene031611.t1 | AT3G24490 | 38.298 | 94 | 52 | 2 | 31 | 124 | 90 | 177 | 2.66e-15 | 75.5 |
| MS.gene031611.t1 | AT2G44730 | 34.737 | 95 | 59 | 2 | 30 | 123 | 63 | 155 | 4.83e-12 | 66.2 |
Find 99 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTGAAACCAAACTCCTTA+TGG | 0.211114 | 4.3:-29258642 | None:intergenic |
| GGCTGCTGCGGCGGCGGCTG+AGG | 0.328447 | 4.3:+29258561 | MS.gene031611:CDS |
| ACAGAGACAAATGGTGGAAT+TGG | 0.329589 | 4.3:+29258723 | MS.gene031611:CDS |
| GATGCAGTTTGTGAAGGATT+TGG | 0.330097 | 4.3:+29258756 | MS.gene031611:CDS |
| CTTCCACCCTCATCGACGCC+TGG | 0.342555 | 4.3:+29258065 | MS.gene031611:CDS |
| ACGTCGCGCTTTCTTGTTAC+CGG | 0.348904 | 4.3:-29258176 | None:intergenic |
| TCCCCGTCCGCGAAGACTGC+TGG | 0.376207 | 4.3:+29258029 | MS.gene031611:CDS |
| CGCGGCGGCTGCTGCGGCGG+CGG | 0.380481 | 4.3:+29258555 | MS.gene031611:CDS |
| GATGGGACCCATAAGGAGTT+TGG | 0.382677 | 4.3:+29258634 | MS.gene031611:CDS |
| TCTGAAACCAAACTCCTTAT+GGG | 0.394233 | 4.3:-29258641 | None:intergenic |
| GTAACCTTCGTCAGAAAACT+TGG | 0.396096 | 4.3:+29258116 | MS.gene031611:CDS |
| CTGGTAACCGCCGTCGGATT+CGG | 0.403172 | 4.3:-29258269 | None:intergenic |
| GGTGGAGAAGGTGGAGATTG+AGG | 0.403697 | 4.3:-29258409 | None:intergenic |
| ATCGTTCCGGCGGAATTTCT+CGG | 0.404517 | 4.3:+29258528 | MS.gene031611:CDS |
| GAGGGTGGAAGTTGCGTCTT+CGG | 0.412190 | 4.3:-29258053 | None:intergenic |
| TCTTCTTTAACGTGTCGATT+CGG | 0.420026 | 4.3:-29258219 | None:intergenic |
| GAAGGTGGAGATTGAGGAGG+TGG | 0.431088 | 4.3:-29258403 | None:intergenic |
| AGTACAAGATCGAGAAAGCT+AGG | 0.431421 | 4.3:+29258242 | MS.gene031611:CDS |
| TTCCACCCTCATCGACGCCT+GGG | 0.432995 | 4.3:+29258066 | MS.gene031611:CDS |
| AAACGCACTAAACGTGCTTC+TGG | 0.443118 | 4.3:+29258832 | MS.gene031611:CDS |
| GTGTGGAGTCAGAGGAATGG+AGG | 0.449241 | 4.3:+29258590 | MS.gene031611:CDS |
| GTCCAGCAGTCTTCGCGGAC+GGG | 0.450561 | 4.3:-29258031 | None:intergenic |
| ACTAAACGTGCTTCTGGTTC+CGG | 0.451057 | 4.3:+29258838 | MS.gene031611:CDS |
| GGCGGCGTGGACGTCGTTGA+CGG | 0.453788 | 4.3:-29258155 | None:intergenic |
| CATCCGGTCGGTCCCCGATC+CGG | 0.459199 | 4.3:+29258466 | MS.gene031611:CDS |
| AAAGAGACGAAGCATCGTTC+CGG | 0.461522 | 4.3:+29258515 | MS.gene031611:CDS |
| GACGAAGGTTACCGCGGTTG+AGG | 0.467100 | 4.3:-29258105 | None:intergenic |
| TGTGGAGTCAGAGGAATGGA+GGG | 0.481728 | 4.3:+29258591 | MS.gene031611:CDS |
| GGTTACCGCGGTTGAGGTCG+AGG | 0.489164 | 4.3:-29258099 | None:intergenic |
| GTTCGCGGCGGCTGCTGCGG+CGG | 0.489343 | 4.3:+29258552 | MS.gene031611:CDS |
| GGCGTTCGCGGCGGCTGCTG+CGG | 0.494203 | 4.3:+29258549 | MS.gene031611:CDS |
| ACCGTCTCCACCGTCGCCTC+CGG | 0.494561 | 4.3:+29258429 | MS.gene031611:CDS |
| TCCAGCAGTCTTCGCGGACG+GGG | 0.495685 | 4.3:-29258030 | None:intergenic |
| TGGAGTCAGAGGAATGGAGG+GGG | 0.503575 | 4.3:+29258593 | MS.gene031611:CDS |
| ACTCGTCTTGACGTTCTCAT+CGG | 0.505614 | 4.3:+29258310 | MS.gene031611:CDS |
| CAGTCTTCGCGGACGGGGAA+CGG | 0.508470 | 4.3:-29258025 | None:intergenic |
| GCGGAATTTCTCGGCGTTCG+CGG | 0.513561 | 4.3:+29258537 | MS.gene031611:CDS |
| GTTGATAGGTGACGGAGCTC+CGG | 0.518538 | 4.3:-29257972 | None:intergenic |
| CGCGGCGGAACGGAGTTGAT+AGG | 0.521754 | 4.3:-29257986 | None:intergenic |
| TCTCCCCGCCGGTGAATGTA+CGG | 0.525928 | 4.3:+29258356 | MS.gene031611:CDS |
| AGAAAACGATGGGACCCATA+AGG | 0.527107 | 4.3:+29258627 | MS.gene031611:CDS |
| GGTCCAGCAGTCTTCGCGGA+CGG | 0.531762 | 4.3:-29258032 | None:intergenic |
| GACGGTGGAGACGGTGGAGA+AGG | 0.533943 | 4.3:-29258421 | None:intergenic |
| GCCGGAGGCGACGGTGGAGA+CGG | 0.537471 | 4.3:-29258430 | None:intergenic |
| GGAGTAGACCGTACATTCAC+CGG | 0.542070 | 4.3:-29258364 | None:intergenic |
| TCAGAGAATGCAGTTATACA+TGG | 0.544592 | 4.3:+29258783 | MS.gene031611:CDS |
| GGCAGAAAGTGTGGAGTCAG+AGG | 0.545717 | 4.3:+29258582 | MS.gene031611:CDS |
| GTTCCGGATCGGGGACCGAC+CGG | 0.547076 | 4.3:-29258469 | None:intergenic |
| ATTATCCACGCCGGAGGCGA+CGG | 0.547703 | 4.3:-29258439 | None:intergenic |
| GTGGACGTCGTTGACGGCGT+CGG | 0.549602 | 4.3:-29258149 | None:intergenic |
| GCAGAGGATGCAGTTTGTGA+AGG | 0.549708 | 4.3:+29258750 | MS.gene031611:CDS |
| GGCGATGACGACGGAAGACG+CGG | 0.549924 | 4.3:-29258004 | None:intergenic |
| CTTCGGTCCAGCAGTCTTCG+CGG | 0.552125 | 4.3:-29258036 | None:intergenic |
| ACGGCGGTTACCAGAGTCCC+TGG | 0.554940 | 4.3:+29258278 | MS.gene031611:CDS |
| GGTGGAGACGGTGGAGAAGG+TGG | 0.555662 | 4.3:-29258418 | None:intergenic |
| TGGTTTCAGAGAGCTCGCTC+AGG | 0.555951 | 4.3:+29258654 | MS.gene031611:CDS |
| AAAGTGTGGAGTCAGAGGAA+TGG | 0.557513 | 4.3:+29258587 | MS.gene031611:CDS |
| AGCTTCAAAACAGAGACAAA+TGG | 0.558007 | 4.3:+29258714 | MS.gene031611:CDS |
| CGACGGAAGACGCGGCGGAA+CGG | 0.559377 | 4.3:-29257996 | None:intergenic |
| GTCAACGACGTCCACGCCGC+CGG | 0.559754 | 4.3:+29258157 | MS.gene031611:CDS |
| GGCGTGGATAATCTCTCATC+CGG | 0.563671 | 4.3:+29258450 | MS.gene031611:CDS |
| TTCACCCCAGGCGTCGATGA+GGG | 0.566151 | 4.3:-29258071 | None:intergenic |
| GTCGAGGTAGCGTTCACCCC+AGG | 0.569139 | 4.3:-29258083 | None:intergenic |
| GGTGGACGTTTGACGACGGT+TGG | 0.571165 | 4.3:-29258385 | None:intergenic |
| ACCCCAGGCGTCGATGAGGG+TGG | 0.576167 | 4.3:-29258068 | None:intergenic |
| CTCCACCGTCGCCTCCGGCG+TGG | 0.577896 | 4.3:+29258434 | MS.gene031611:CDS |
| GTACAAGATCGAGAAAGCTA+GGG | 0.590074 | 4.3:+29258243 | MS.gene031611:CDS |
| ACGGGGAACGGCGATGACGA+CGG | 0.590204 | 4.3:-29258013 | None:intergenic |
| GAGACGAAGCATCGTTCCGG+CGG | 0.597085 | 4.3:+29258518 | MS.gene031611:CDS |
| TGGATAATCTCTCATCCGGT+CGG | 0.599124 | 4.3:+29258454 | MS.gene031611:CDS |
| ATCCACGCCGGAGGCGACGG+TGG | 0.604964 | 4.3:-29258436 | None:intergenic |
| AGAAAGGAAGAGAAAACGAT+GGG | 0.606592 | 4.3:+29258617 | MS.gene031611:CDS |
| CTTTCTTGTTACCGGCGGCG+TGG | 0.607096 | 4.3:-29258168 | None:intergenic |
| TCGTCAGAAAACTTGGCAAG+AGG | 0.608905 | 4.3:+29258123 | MS.gene031611:CDS |
| GTGGAGTCAGAGGAATGGAG+GGG | 0.611126 | 4.3:+29258592 | MS.gene031611:CDS |
| TAGACCGTACATTCACCGGC+GGG | 0.615042 | 4.3:-29258360 | None:intergenic |
| GTTCACCCCAGGCGTCGATG+AGG | 0.617071 | 4.3:-29258072 | None:intergenic |
| GGAGGCGACGGTGGAGACGG+TGG | 0.619172 | 4.3:-29258427 | None:intergenic |
| TGGTGGAATTGGAGAAGCAG+AGG | 0.620275 | 4.3:+29258734 | MS.gene031611:CDS |
| GGCGGCTGAGGCAGAAAGTG+TGG | 0.620535 | 4.3:+29258573 | MS.gene031611:CDS |
| TCCACCCTCATCGACGCCTG+GGG | 0.621538 | 4.3:+29258067 | MS.gene031611:CDS |
| GGAACGGAGTTGATAGGTGA+CGG | 0.622230 | 4.3:-29257980 | None:intergenic |
| GGGACTCTGGTAACCGCCGT+CGG | 0.624801 | 4.3:-29258275 | None:intergenic |
| GGAGAAGGTGGAGATTGAGG+AGG | 0.635406 | 4.3:-29258406 | None:intergenic |
| GAATTTCTCGGCGTTCGCGG+CGG | 0.637732 | 4.3:+29258540 | MS.gene031611:CDS |
| AAGAAAGGAAGAGAAAACGA+TGG | 0.648071 | 4.3:+29258616 | MS.gene031611:CDS |
| AGGAGGTGGACGTTTGACGA+CGG | 0.650309 | 4.3:-29258389 | None:intergenic |
| CGAACGCCGAGAAATTCCGC+CGG | 0.653177 | 4.3:-29258534 | None:intergenic |
| GCAGTTATACATGGAAACGC+AGG | 0.653381 | 4.3:+29258792 | MS.gene031611:CDS |
| CGCTACCTCGACCTCAACCG+CGG | 0.655983 | 4.3:+29258094 | MS.gene031611:CDS |
| TGAGAGATTATCCACGCCGG+AGG | 0.660526 | 4.3:-29258445 | None:intergenic |
| TTCAAAACAGAGACAAATGG+TGG | 0.662111 | 4.3:+29258717 | MS.gene031611:CDS |
| GCTAGGGTTTCCGAATCCGA+CGG | 0.665069 | 4.3:+29258259 | MS.gene031611:CDS |
| TCGCGCTTTCTTGTTACCGG+CGG | 0.665856 | 4.3:-29258173 | None:intergenic |
| AGGGTTTCCGAATCCGACGG+CGG | 0.672515 | 4.3:+29258262 | MS.gene031611:CDS |
| GATGACGACGGAAGACGCGG+CGG | 0.700874 | 4.3:-29258001 | None:intergenic |
| AGACCGTACATTCACCGGCG+GGG | 0.706976 | 4.3:-29258359 | None:intergenic |
| GTAGACCGTACATTCACCGG+CGG | 0.721299 | 4.3:-29258361 | None:intergenic |
| GGATGAGAGATTATCCACGC+CGG | 0.738065 | 4.3:-29258448 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATATTACTAAAATAATTG+AGG | + | chr4.3:29260504-29260523 | MS.gene031611:intron | 10.0% |
| !!! | GATATTTTTTTTAAAATTTG+GGG | - | chr4.3:29260685-29260704 | None:intergenic | 10.0% |
| !! | AATGATATTATAATCACATT+TGG | - | chr4.3:29260456-29260475 | None:intergenic | 15.0% |
| !! | ATATCATTATTAATATATGC+AGG | + | chr4.3:29260468-29260487 | MS.gene031611:intron | 15.0% |
| !! | TTATTCTGAATGATTATTAA+GGG | + | chr4.3:29258953-29258972 | MS.gene031611:intron | 15.0% |
| !!! | ATATGAGTATTAACATTTTA+AGG | - | chr4.3:29260632-29260651 | None:intergenic | 15.0% |
| !!! | CATTGTATTTGATTTTTTTA+TGG | + | chr4.3:29258889-29258908 | MS.gene031611:intron | 15.0% |
| !!! | TATGAGTATTAACATTTTAA+GGG | - | chr4.3:29260631-29260650 | None:intergenic | 15.0% |
| !!! | TCAAAAGTGTTATATAATTA+AGG | - | chr4.3:29259453-29259472 | None:intergenic | 15.0% |
| !!! | TTTTTATGGTTTTATTTATC+TGG | + | chr4.3:29258903-29258922 | MS.gene031611:intron | 15.0% |
| !! | AAAAGTTATGAAAGTCTAAA+GGG | + | chr4.3:29259093-29259112 | MS.gene031611:intron | 20.0% |
| !! | AATTTAAGCCAAAAATTATG+AGG | - | chr4.3:29259880-29259899 | None:intergenic | 20.0% |
| !! | ATCACATTAATGTGTAAATT+TGG | + | chr4.3:29258983-29259002 | MS.gene031611:intron | 20.0% |
| !! | CAAAAATAAGTCAATTCAAA+CGG | - | chr4.3:29259192-29259211 | None:intergenic | 20.0% |
| !! | CTTATTCTGAATGATTATTA+AGG | + | chr4.3:29258952-29258971 | MS.gene031611:intron | 20.0% |
| !! | GAAAATAATATTCTGTAAAC+AGG | - | chr4.3:29259762-29259781 | None:intergenic | 20.0% |
| !! | TAAAAGTTATGAAAGTCTAA+AGG | + | chr4.3:29259092-29259111 | MS.gene031611:intron | 20.0% |
| !! | TCACAATAAAGCATAAAATA+GGG | - | chr4.3:29259635-29259654 | None:intergenic | 20.0% |
| !! | TTCACAATAAAGCATAAAAT+AGG | - | chr4.3:29259636-29259655 | None:intergenic | 20.0% |
| !! | TTTCTATATATACTGTTCTT+GGG | + | chr4.3:29259546-29259565 | MS.gene031611:intron | 20.0% |
| !!! | AATGATCATAAATTTGAAAC+AGG | - | chr4.3:29258873-29258892 | None:intergenic | 20.0% |
| !!! | CAGAATATTATTTTCACATT+TGG | + | chr4.3:29259767-29259786 | MS.gene031611:intron | 20.0% |
| !!! | TATTTTGTTACTTGTGATAA+TGG | + | chr4.3:29259037-29259056 | MS.gene031611:intron | 20.0% |
| !!! | TGTGTAAATTTGGTTTTATA+TGG | + | chr4.3:29258993-29259012 | MS.gene031611:intron | 20.0% |
| !!! | TTCTTAATAAAAAGTGCATA+AGG | - | chr4.3:29259960-29259979 | None:intergenic | 20.0% |
| ! | AAAGTTATGAAAGTCTAAAG+GGG | + | chr4.3:29259094-29259113 | MS.gene031611:intron | 25.0% |
| ! | AGGATAAAACTAAGTAACAT+AGG | - | chr4.3:29259742-29259761 | None:intergenic | 25.0% |
| ! | ATCTTCGAATAGTAAATATG+TGG | - | chr4.3:29260366-29260385 | None:intergenic | 25.0% |
| ! | ATGTAAACAAACGTCAATTA+AGG | - | chr4.3:29260786-29260805 | None:intergenic | 25.0% |
| ! | ATGTTTACTTTAGATTTCAG+TGG | + | chr4.3:29259910-29259929 | MS.gene031611:intron | 25.0% |
| ! | CTTTCTATATATACTGTTCT+TGG | + | chr4.3:29259545-29259564 | MS.gene031611:intron | 25.0% |
| ! | GTATGAAAATTGACAAACTT+GGG | + | chr4.3:29259165-29259184 | MS.gene031611:intron | 25.0% |
| ! | TAAAAGTAAGTCAATCCAAA+CGG | + | chr4.3:29259364-29259383 | MS.gene031611:intron | 25.0% |
| ! | TATGAAAATTGACAAACTTG+GGG | + | chr4.3:29259166-29259185 | MS.gene031611:intron | 25.0% |
| ! | TGTATGAAAATTGACAAACT+TGG | + | chr4.3:29259164-29259183 | MS.gene031611:intron | 25.0% |
| ! | TGTTTACTTTAGATTTCAGT+GGG | + | chr4.3:29259911-29259930 | MS.gene031611:intron | 25.0% |
| ! | TTCATTGACATTGAACAATA+AGG | + | chr4.3:29260163-29260182 | MS.gene031611:intron | 25.0% |
| ! | TTTAAAAATATCCACATCAG+AGG | + | chr4.3:29260605-29260624 | MS.gene031611:intron | 25.0% |
| !! | AAGACATGAGTTAAGTTTTA+GGG | + | chr4.3:29259405-29259424 | MS.gene031611:intron | 25.0% |
| !! | CAACTTTTATGAGACAAAAT+TGG | + | chr4.3:29260218-29260237 | MS.gene031611:intron | 25.0% |
| !! | CATATTTTATTCTGAATGAG+TGG | + | chr4.3:29260647-29260666 | MS.gene031611:intron | 25.0% |
| !! | CATGATATTAAGTCTCTTTT+TGG | + | chr4.3:29260402-29260421 | MS.gene031611:intron | 25.0% |
| !! | TTGCATAACCTCATAATTTT+TGG | + | chr4.3:29259869-29259888 | MS.gene031611:intron | 25.0% |
| !!! | AACAATAAGGTTTTTTCCTT+TGG | + | chr4.3:29260176-29260195 | MS.gene031611:intron | 25.0% |
| !!! | AGTCTTGTCTTAAAGTTTTA+TGG | - | chr4.3:29260031-29260050 | None:intergenic | 25.0% |
| !!! | TCTGATGTGGATATTTTTAA+AGG | - | chr4.3:29260606-29260625 | None:intergenic | 25.0% |
| AAAAGTAAGTCAATCCAAAC+GGG | + | chr4.3:29259365-29259384 | MS.gene031611:intron | 30.0% | |
| ACAAGACTTCTTATGTTATC+TGG | + | chr4.3:29260043-29260062 | MS.gene031611:intron | 30.0% | |
| AGATCCACATAGACAAAAAT+GGG | - | chr4.3:29260575-29260594 | None:intergenic | 30.0% | |
| AGGTCATTATGTAACTATTG+AGG | + | chr4.3:29260524-29260543 | MS.gene031611:intron | 30.0% | |
| ATATATACTGTTCTTGGGAT+TGG | + | chr4.3:29259551-29259570 | MS.gene031611:intron | 30.0% | |
| ATGTCTTGATACAAAACATC+TGG | - | chr4.3:29259392-29259411 | None:intergenic | 30.0% | |
| GAAGAAAAAGTTGTTTACTG+AGG | + | chr4.3:29259653-29259672 | MS.gene031611:intron | 30.0% | |
| TATATACTGTTCTTGGGATT+GGG | + | chr4.3:29259552-29259571 | MS.gene031611:intron | 30.0% | |
| TATTATTCACAAGCTTCTCA+AGG | - | chr4.3:29259316-29259335 | None:intergenic | 30.0% | |
| TCAAACTGAAACAAACAAAC+AGG | + | chr4.3:29260005-29260024 | MS.gene031611:intron | 30.0% | |
| TGTCTTGATACAAAACATCT+GGG | - | chr4.3:29259391-29259410 | None:intergenic | 30.0% | |
| ! | CAAGACATGAGTTAAGTTTT+AGG | + | chr4.3:29259404-29259423 | MS.gene031611:intron | 30.0% |
| !! | AGACATGAGTTAAGTTTTAG+GGG | + | chr4.3:29259406-29259425 | MS.gene031611:intron | 30.0% |
| !! | GTGGATATTTTTAAAGGCAA+GGG | - | chr4.3:29260600-29260619 | None:intergenic | 30.0% |
| !! | GTTTCAGTTTGAGATTTTAG+TGG | - | chr4.3:29259997-29260016 | None:intergenic | 30.0% |
| !! | TGGATATTTTTAAAGGCAAG+GGG | - | chr4.3:29260599-29260618 | None:intergenic | 30.0% |
| !! | TGTGGATATTTTTAAAGGCA+AGG | - | chr4.3:29260601-29260620 | None:intergenic | 30.0% |
| !!! | TGGGATGGTAAGAAATTTTT+TGG | + | chr4.3:29259571-29259590 | MS.gene031611:intron | 30.0% |
| AAGAAAGGAAGAGAAAACGA+TGG | + | chr4.3:29258616-29258635 | MS.gene031611:CDS | 35.0% | |
| AAGCTTATGAAGATCAACGT+TGG | - | chr4.3:29259279-29259298 | None:intergenic | 35.0% | |
| AAGTGTAAAGCACATACAAG+TGG | - | chr4.3:29259690-29259709 | None:intergenic | 35.0% | |
| AGAAAAGCAGGAGTTGTTTA+AGG | - | chr4.3:29260249-29260268 | None:intergenic | 35.0% | |
| AGAAAGGAAGAGAAAACGAT+GGG | + | chr4.3:29258617-29258636 | MS.gene031611:CDS | 35.0% | |
| AGCTTCAAAACAGAGACAAA+TGG | + | chr4.3:29258714-29258733 | MS.gene031611:CDS | 35.0% | |
| AGGGGAAAATGTTTGTTCAT+TGG | + | chr4.3:29259112-29259131 | MS.gene031611:intron | 35.0% | |
| CAGTGGGAAACAAACAAAAA+AGG | + | chr4.3:29259927-29259946 | MS.gene031611:intron | 35.0% | |
| GAGATCCACATAGACAAAAA+TGG | - | chr4.3:29260576-29260595 | None:intergenic | 35.0% | |
| TCAAAATACTGTCACTAAGC+AGG | - | chr4.3:29259514-29259533 | None:intergenic | 35.0% | |
| TCAGAGAATGCAGTTATACA+TGG | + | chr4.3:29258783-29258802 | MS.gene031611:CDS | 35.0% | |
| TCTTGTTAAGCTGAGAAAGA+AGG | - | chr4.3:29260827-29260846 | None:intergenic | 35.0% | |
| TTCAAAACAGAGACAAATGG+TGG | + | chr4.3:29258717-29258736 | MS.gene031611:CDS | 35.0% | |
| ! | TCTGAAACCAAACTCCTTAT+GGG | - | chr4.3:29258644-29258663 | None:intergenic | 35.0% |
| !! | ATGTCCCATTTTTGTCTATG+TGG | + | chr4.3:29260568-29260587 | MS.gene031611:intron | 35.0% |
| !! | CTTTGGAACCAAAATTGACT+GGG | + | chr4.3:29260193-29260212 | MS.gene031611:intron | 35.0% |
| !! | GGATATTTTTAAAGGCAAGG+GGG | - | chr4.3:29260598-29260617 | None:intergenic | 35.0% |
| !! | TCTTCTTTAACGTGTCGATT+CGG | - | chr4.3:29258222-29258241 | None:intergenic | 35.0% |
| AAAATAGGGAACCAACATGC+AGG | - | chr4.3:29259621-29259640 | None:intergenic | 40.0% | |
| ACACCATGCATCTTAAGTAC+TGG | + | chr4.3:29260340-29260359 | MS.gene031611:intron | 40.0% | |
| ACCAACATGCAGGTTTCTTA+AGG | - | chr4.3:29259611-29259630 | None:intergenic | 40.0% | |
| ACGTCAAGACGAGTGAAAAA+CGG | - | chr4.3:29258304-29258323 | None:intergenic | 40.0% | |
| AGTACAAGATCGAGAAAGCT+AGG | + | chr4.3:29258242-29258261 | MS.gene031611:CDS | 40.0% | |
| CAGGTTTCTTAAGGGAGAAT+TGG | - | chr4.3:29259602-29259621 | None:intergenic | 40.0% | |
| CATAAACACTAGCATGGTGT+AGG | + | chr4.3:29260272-29260291 | MS.gene031611:intron | 40.0% | |
| CCAACATGCAGGTTTCTTAA+GGG | - | chr4.3:29259610-29259629 | None:intergenic | 40.0% | |
| CTACACCATGCTAGTGTTTA+TGG | - | chr4.3:29260274-29260293 | None:intergenic | 40.0% | |
| CTTAGTTCAGCTTGTCTTGT+TGG | + | chr4.3:29260112-29260131 | MS.gene031611:intron | 40.0% | |
| GATGCAGTTTGTGAAGGATT+TGG | + | chr4.3:29258756-29258775 | MS.gene031611:CDS | 40.0% | |
| GTAACCTTCGTCAGAAAACT+TGG | + | chr4.3:29258116-29258135 | MS.gene031611:CDS | 40.0% | |
| GTACAAGATCGAGAAAGCTA+GGG | + | chr4.3:29258243-29258262 | MS.gene031611:CDS | 40.0% | |
| GTGTTTATGGAGAGAAAAGC+AGG | - | chr4.3:29260261-29260280 | None:intergenic | 40.0% | |
| GTTGTTTACTGAGGTTGAAG+TGG | + | chr4.3:29259662-29259681 | MS.gene031611:intron | 40.0% | |
| TCTCTCCATAAACACTAGCA+TGG | + | chr4.3:29260266-29260285 | MS.gene031611:intron | 40.0% | |
| TTGAAACAGGTTAAGCTCAC+CGG | - | chr4.3:29258860-29258879 | None:intergenic | 40.0% | |
| ! | AAGTTGTGCCCAGTCAATTT+TGG | - | chr4.3:29260204-29260223 | None:intergenic | 40.0% |
| ! | ACAGAGACAAATGGTGGAAT+TGG | + | chr4.3:29258723-29258742 | MS.gene031611:CDS | 40.0% |
| ! | TGTCTTGTTGGTCACAGATA+TGG | + | chr4.3:29260124-29260143 | MS.gene031611:intron | 40.0% |
| !! | CCTTTGGAACCAAAATTGAC+TGG | + | chr4.3:29260192-29260211 | MS.gene031611:intron | 40.0% |
| !! | CTCTGAAACCAAACTCCTTA+TGG | - | chr4.3:29258645-29258664 | None:intergenic | 40.0% |
| !!! | CCAGTCAATTTTGGTTCCAA+AGG | - | chr4.3:29260195-29260214 | None:intergenic | 40.0% |
| AAACGCACTAAACGTGCTTC+TGG | + | chr4.3:29258832-29258851 | MS.gene031611:CDS | 45.0% | |
| AAAGTGTGGAGTCAGAGGAA+TGG | + | chr4.3:29258587-29258606 | MS.gene031611:CDS | 45.0% | |
| AACACAAAAACGTCCGGCAA+TGG | + | chr4.3:29258489-29258508 | MS.gene031611:CDS | 45.0% | |
| ACTCGTCTTGACGTTCTCAT+CGG | + | chr4.3:29258310-29258329 | MS.gene031611:CDS | 45.0% | |
| AGAAAACGATGGGACCCATA+AGG | + | chr4.3:29258627-29258646 | MS.gene031611:CDS | 45.0% | |
| ATCCGGAACACAAAAACGTC+CGG | + | chr4.3:29258483-29258502 | MS.gene031611:CDS | 45.0% | |
| CCCTTAAGAAACCTGCATGT+TGG | + | chr4.3:29259607-29259626 | MS.gene031611:intron | 45.0% | |
| GCAGTTATACATGGAAACGC+AGG | + | chr4.3:29258792-29258811 | MS.gene031611:CDS | 45.0% | |
| TACTGTTCTTGGGATTGGGA+TGG | + | chr4.3:29259556-29259575 | MS.gene031611:intron | 45.0% | |
| TATGAGAAACTGTCTGCTGG+AGG | - | chr4.3:29260927-29260946 | None:intergenic | 45.0% | |
| TCGTCAGAAAACTTGGCAAG+AGG | + | chr4.3:29258123-29258142 | MS.gene031611:CDS | 45.0% | |
| TGGATAATCTCTCATCCGGT+CGG | + | chr4.3:29258454-29258473 | MS.gene031611:CDS | 45.0% | |
| TGGCCAGTACTTAAGATGCA+TGG | - | chr4.3:29260346-29260365 | None:intergenic | 45.0% | |
| ! | ACGTTTTTGTGTTCCGGATC+GGG | - | chr4.3:29258482-29258501 | None:intergenic | 45.0% |
| ! | CTTGCCAAGTTTTCTGACGA+AGG | - | chr4.3:29258123-29258142 | None:intergenic | 45.0% |
| ! | GACGTTTTTGTGTTCCGGAT+CGG | - | chr4.3:29258483-29258502 | None:intergenic | 45.0% |
| ! | TCGGTTTTTGCACTGAACGT+CGG | - | chr4.3:29258203-29258222 | None:intergenic | 45.0% |
| ! | TCTCATCGGCGATACTTTTC+CGG | + | chr4.3:29258324-29258343 | MS.gene031611:CDS | 45.0% |
| ! | TTTTCTGACGAAGGTTACCG+CGG | - | chr4.3:29258114-29258133 | None:intergenic | 45.0% |
| !! | AAAGAGACGAAGCATCGTTC+CGG | + | chr4.3:29258515-29258534 | MS.gene031611:CDS | 45.0% |
| !! | ACTAAACGTGCTTCTGGTTC+CGG | + | chr4.3:29258838-29258857 | MS.gene031611:CDS | 45.0% |
| !! | CATTTTAAGGGCCTCTGATG+TGG | - | chr4.3:29260619-29260638 | None:intergenic | 45.0% |
| !!! | ATGATATTTTTTTTAAAATT+TGG | - | chr4.3:29260687-29260706 | None:intergenic | 5.0% |
| !!! | TGATATTTTTTTTAAAATTT+GGG | - | chr4.3:29260686-29260705 | None:intergenic | 5.0% |
| AAGACGAGTGAAAAACGGCC+AGG | - | chr4.3:29258299-29258318 | None:intergenic | 50.0% | |
| ACAAAACATCTGGGCCCGTT+TGG | - | chr4.3:29259382-29259401 | None:intergenic | 50.0% | |
| ACGTCGCGCTTTCTTGTTAC+CGG | - | chr4.3:29258179-29258198 | None:intergenic | 50.0% | |
| AGACGAGTGAAAAACGGCCA+GGG | - | chr4.3:29258298-29258317 | None:intergenic | 50.0% | |
| ATCGTTCCGGCGGAATTTCT+CGG | + | chr4.3:29258528-29258547 | MS.gene031611:CDS | 50.0% | |
| GATGGGACCCATAAGGAGTT+TGG | + | chr4.3:29258634-29258653 | MS.gene031611:CDS | 50.0% | |
| GCAGAGGATGCAGTTTGTGA+AGG | + | chr4.3:29258750-29258769 | MS.gene031611:CDS | 50.0% | |
| GGAGTAGACCGTACATTCAC+CGG | - | chr4.3:29258367-29258386 | None:intergenic | 50.0% | |
| GGATGAGAGATTATCCACGC+CGG | - | chr4.3:29258451-29258470 | None:intergenic | 50.0% | |
| GGCGTGGATAATCTCTCATC+CGG | + | chr4.3:29258450-29258469 | MS.gene031611:CDS | 50.0% | |
| GGTTGCTTGCAGCAGAAGTT+GGG | + | chr4.3:29259014-29259033 | MS.gene031611:intron | 50.0% | |
| TGGTGGAATTGGAGAAGCAG+AGG | + | chr4.3:29258734-29258753 | MS.gene031611:CDS | 50.0% | |
| TGGTTGCTTGCAGCAGAAGT+TGG | + | chr4.3:29259013-29259032 | MS.gene031611:intron | 50.0% | |
| TGTGGAGTCAGAGGAATGGA+GGG | + | chr4.3:29258591-29258610 | MS.gene031611:CDS | 50.0% | |
| ! | CGTTTTTGTGTTCCGGATCG+GGG | - | chr4.3:29258481-29258500 | None:intergenic | 50.0% |
| ! | TCGTCTCTTTTCGCCATTGC+CGG | - | chr4.3:29258505-29258524 | None:intergenic | 50.0% |
| ! | TGCCGGACGTTTTTGTGTTC+CGG | - | chr4.3:29258488-29258507 | None:intergenic | 50.0% |
| !! | GGAACGGAGTTGATAGGTGA+CGG | - | chr4.3:29257983-29258002 | None:intergenic | 50.0% |
| AGGAGGTGGACGTTTGACGA+CGG | - | chr4.3:29258392-29258411 | None:intergenic | 55.0% | |
| GAAGGTGGAGATTGAGGAGG+TGG | - | chr4.3:29258406-29258425 | None:intergenic | 55.0% | |
| GAGGAATGGAGGGGGAAGAA+AGG | + | chr4.3:29258601-29258620 | MS.gene031611:CDS | 55.0% | |
| GAGGGTGGAAGTTGCGTCTT+CGG | - | chr4.3:29258056-29258075 | None:intergenic | 55.0% | |
| GCTAGGGTTTCCGAATCCGA+CGG | + | chr4.3:29258259-29258278 | MS.gene031611:CDS | 55.0% | |
| GGAGAAGGTGGAGATTGAGG+AGG | - | chr4.3:29258409-29258428 | None:intergenic | 55.0% | |
| GGTCAAAAAACTCTCCCCGC+CGG | + | chr4.3:29258345-29258364 | MS.gene031611:CDS | 55.0% | |
| GGTGGAGAAGGTGGAGATTG+AGG | - | chr4.3:29258412-29258431 | None:intergenic | 55.0% | |
| GTAGACCGTACATTCACCGG+CGG | - | chr4.3:29258364-29258383 | None:intergenic | 55.0% | |
| GTGGAGTCAGAGGAATGGAG+GGG | + | chr4.3:29258592-29258611 | MS.gene031611:CDS | 55.0% | |
| GTGTGGAGTCAGAGGAATGG+AGG | + | chr4.3:29258590-29258609 | MS.gene031611:CDS | 55.0% | |
| TAGACCGTACATTCACCGGC+GGG | - | chr4.3:29258363-29258382 | None:intergenic | 55.0% | |
| TCGCGCTTTCTTGTTACCGG+CGG | - | chr4.3:29258176-29258195 | None:intergenic | 55.0% | |
| TGAAAAACGGCCAGGGACTC+TGG | - | chr4.3:29258291-29258310 | None:intergenic | 55.0% | |
| TGAGAGATTATCCACGCCGG+AGG | - | chr4.3:29258448-29258467 | None:intergenic | 55.0% | |
| TGGAGTCAGAGGAATGGAGG+GGG | + | chr4.3:29258593-29258612 | MS.gene031611:CDS | 55.0% | |
| TGGTTTCAGAGAGCTCGCTC+AGG | + | chr4.3:29258654-29258673 | MS.gene031611:CDS | 55.0% | |
| ! | GGCAGAAAGTGTGGAGTCAG+AGG | + | chr4.3:29258582-29258601 | MS.gene031611:CDS | 55.0% |
| !! | GTTGATAGGTGACGGAGCTC+CGG | - | chr4.3:29257975-29257994 | None:intergenic | 55.0% |
| !!! | GGCGGGGAGAGTTTTTTGAC+CGG | - | chr4.3:29258346-29258365 | None:intergenic | 55.0% |
| AGACCGTACATTCACCGGCG+GGG | - | chr4.3:29258362-29258381 | None:intergenic | 60.0% | |
| AGGGTTTCCGAATCCGACGG+CGG | + | chr4.3:29258262-29258281 | MS.gene031611:CDS | 60.0% | |
| ATTATCCACGCCGGAGGCGA+CGG | - | chr4.3:29258442-29258461 | None:intergenic | 60.0% | |
| CGAACGCCGAGAAATTCCGC+CGG | - | chr4.3:29258537-29258556 | None:intergenic | 60.0% | |
| CTGGTAACCGCCGTCGGATT+CGG | - | chr4.3:29258272-29258291 | None:intergenic | 60.0% | |
| CTTCGGTCCAGCAGTCTTCG+CGG | - | chr4.3:29258039-29258058 | None:intergenic | 60.0% | |
| CTTTCTTGTTACCGGCGGCG+TGG | - | chr4.3:29258171-29258190 | None:intergenic | 60.0% | |
| GAATTTCTCGGCGTTCGCGG+CGG | + | chr4.3:29258540-29258559 | MS.gene031611:CDS | 60.0% | |
| GACGAAGGTTACCGCGGTTG+AGG | - | chr4.3:29258108-29258127 | None:intergenic | 60.0% | |
| GCGGAATTTCTCGGCGTTCG+CGG | + | chr4.3:29258537-29258556 | MS.gene031611:CDS | 60.0% | |
| GGTGGACGTTTGACGACGGT+TGG | - | chr4.3:29258388-29258407 | None:intergenic | 60.0% | |
| TCTCCCCGCCGGTGAATGTA+CGG | + | chr4.3:29258356-29258375 | MS.gene031611:CDS | 60.0% | |
| TTCCACCCTCATCGACGCCT+GGG | + | chr4.3:29258066-29258085 | MS.gene031611:CDS | 60.0% | |
| !! | GAGACGAAGCATCGTTCCGG+CGG | + | chr4.3:29258518-29258537 | MS.gene031611:CDS | 60.0% |
| !! | TTCACCCCAGGCGTCGATGA+GGG | - | chr4.3:29258074-29258093 | None:intergenic | 60.0% |
| ACGGCGGTTACCAGAGTCCC+TGG | + | chr4.3:29258278-29258297 | MS.gene031611:CDS | 65.0% | |
| ACGGGGAACGGCGATGACGA+CGG | - | chr4.3:29258016-29258035 | None:intergenic | 65.0% | |
| CAGTCTTCGCGGACGGGGAA+CGG | - | chr4.3:29258028-29258047 | None:intergenic | 65.0% | |
| CGCTACCTCGACCTCAACCG+CGG | + | chr4.3:29258094-29258113 | MS.gene031611:CDS | 65.0% | |
| CTTCCACCCTCATCGACGCC+TGG | + | chr4.3:29258065-29258084 | MS.gene031611:CDS | 65.0% | |
| GACGGTGGAGACGGTGGAGA+AGG | - | chr4.3:29258424-29258443 | None:intergenic | 65.0% | |
| GATGACGACGGAAGACGCGG+CGG | - | chr4.3:29258004-29258023 | None:intergenic | 65.0% | |
| GGCGATGACGACGGAAGACG+CGG | - | chr4.3:29258007-29258026 | None:intergenic | 65.0% | |
| GGCGGCTGAGGCAGAAAGTG+TGG | + | chr4.3:29258573-29258592 | MS.gene031611:CDS | 65.0% | |
| GGGACTCTGGTAACCGCCGT+CGG | - | chr4.3:29258278-29258297 | None:intergenic | 65.0% | |
| GGTCCAGCAGTCTTCGCGGA+CGG | - | chr4.3:29258035-29258054 | None:intergenic | 65.0% | |
| GGTGGAGACGGTGGAGAAGG+TGG | - | chr4.3:29258421-29258440 | None:intergenic | 65.0% | |
| GGTTACCGCGGTTGAGGTCG+AGG | - | chr4.3:29258102-29258121 | None:intergenic | 65.0% | |
| GTCCAGCAGTCTTCGCGGAC+GGG | - | chr4.3:29258034-29258053 | None:intergenic | 65.0% | |
| GTCGAGGTAGCGTTCACCCC+AGG | - | chr4.3:29258086-29258105 | None:intergenic | 65.0% | |
| GTGGACGTCGTTGACGGCGT+CGG | - | chr4.3:29258152-29258171 | None:intergenic | 65.0% | |
| TCCACCCTCATCGACGCCTG+GGG | + | chr4.3:29258067-29258086 | MS.gene031611:CDS | 65.0% | |
| TCCAGCAGTCTTCGCGGACG+GGG | - | chr4.3:29258033-29258052 | None:intergenic | 65.0% | |
| ! | CGCGGCGGAACGGAGTTGAT+AGG | - | chr4.3:29257989-29258008 | None:intergenic | 65.0% |
| !! | GTTCACCCCAGGCGTCGATG+AGG | - | chr4.3:29258075-29258094 | None:intergenic | 65.0% |
| ACCGTCTCCACCGTCGCCTC+CGG | + | chr4.3:29258429-29258448 | MS.gene031611:CDS | 70.0% | |
| CATCCGGTCGGTCCCCGATC+CGG | + | chr4.3:29258466-29258485 | MS.gene031611:CDS | 70.0% | |
| CGACGGAAGACGCGGCGGAA+CGG | - | chr4.3:29257999-29258018 | None:intergenic | 70.0% | |
| GGCGGCGTGGACGTCGTTGA+CGG | - | chr4.3:29258158-29258177 | None:intergenic | 70.0% | |
| GTCAACGACGTCCACGCCGC+CGG | + | chr4.3:29258157-29258176 | MS.gene031611:CDS | 70.0% | |
| GTTCCGGATCGGGGACCGAC+CGG | - | chr4.3:29258472-29258491 | None:intergenic | 70.0% | |
| TCCCCGTCCGCGAAGACTGC+TGG | + | chr4.3:29258029-29258048 | MS.gene031611:CDS | 70.0% | |
| !! | ACCCCAGGCGTCGATGAGGG+TGG | - | chr4.3:29258071-29258090 | None:intergenic | 70.0% |
| ATCCACGCCGGAGGCGACGG+TGG | - | chr4.3:29258439-29258458 | None:intergenic | 75.0% | |
| GCCGGAGGCGACGGTGGAGA+CGG | - | chr4.3:29258433-29258452 | None:intergenic | 75.0% | |
| GGAGGCGACGGTGGAGACGG+TGG | - | chr4.3:29258430-29258449 | None:intergenic | 75.0% | |
| ! | CTCCACCGTCGCCTCCGGCG+TGG | + | chr4.3:29258434-29258453 | MS.gene031611:CDS | 80.0% |
| ! | GGCGTTCGCGGCGGCTGCTG+CGG | + | chr4.3:29258549-29258568 | MS.gene031611:CDS | 80.0% |
| ! | GTTCGCGGCGGCTGCTGCGG+CGG | + | chr4.3:29258552-29258571 | MS.gene031611:CDS | 80.0% |
| ! | GGCTGCTGCGGCGGCGGCTG+AGG | + | chr4.3:29258561-29258580 | MS.gene031611:CDS | 85.0% |
| ! | CGCGGCGGCTGCTGCGGCGG+CGG | + | chr4.3:29258555-29258574 | MS.gene031611:CDS | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 29257959 | 29260947 | 29257959 | ID=MS.gene031611 |
| chr4.3 | mRNA | 29257959 | 29260947 | 29257959 | ID=MS.gene031611.t1;Parent=MS.gene031611 |
| chr4.3 | exon | 29257959 | 29258859 | 29257959 | ID=MS.gene031611.t1.exon1;Parent=MS.gene031611.t1 |
| chr4.3 | CDS | 29257959 | 29258859 | 29257959 | ID=cds.MS.gene031611.t1;Parent=MS.gene031611.t1 |
| chr4.3 | exon | 29260931 | 29260947 | 29260931 | ID=MS.gene031611.t1.exon2;Parent=MS.gene031611.t1 |
| chr4.3 | CDS | 29260931 | 29260947 | 29260931 | ID=cds.MS.gene031611.t1;Parent=MS.gene031611.t1 |
| Gene Sequence |
| Protein sequence |
