Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031655.t1 | XP_003607530.2 | 96.2 | 505 | 13 | 2 | 1 | 500 | 1 | 504 | 2.50E-253 | 884.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031655.t1 | Q9SGQ0 | 46.0 | 483 | 174 | 11 | 13 | 476 | 12 | 426 | 4.4e-102 | 373.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031655.t1 | G7JUY7 | 96.2 | 505 | 13 | 2 | 1 | 500 | 1 | 504 | 1.8e-253 | 884.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene031655.t1 | TF | VOZ |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031655.t1 | MTR_4g079240 | 95.842 | 505 | 15 | 2 | 1 | 500 | 1 | 504 | 0.0 | 1002 |
| MS.gene031655.t1 | MTR_4g088125 | 47.853 | 489 | 190 | 11 | 13 | 497 | 11 | 438 | 3.48e-141 | 415 |
| MS.gene031655.t1 | MTR_2g014870 | 46.341 | 123 | 57 | 5 | 14 | 130 | 10 | 129 | 4.23e-21 | 89.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031655.t1 | AT1G28520 | 47.205 | 483 | 168 | 11 | 13 | 476 | 12 | 426 | 5.43e-135 | 399 |
| MS.gene031655.t1 | AT1G28520 | 47.205 | 483 | 168 | 11 | 13 | 476 | 12 | 426 | 5.43e-135 | 399 |
| MS.gene031655.t1 | AT1G28520 | 47.205 | 483 | 168 | 11 | 13 | 476 | 12 | 426 | 5.43e-135 | 399 |
| MS.gene031655.t1 | AT1G28520 | 47.205 | 483 | 168 | 11 | 13 | 476 | 12 | 426 | 5.43e-135 | 399 |
| MS.gene031655.t1 | AT1G28520 | 45.417 | 480 | 165 | 10 | 13 | 476 | 12 | 410 | 2.47e-127 | 379 |
| MS.gene031655.t1 | AT2G42400 | 44.223 | 502 | 196 | 16 | 13 | 489 | 8 | 450 | 9.15e-118 | 354 |
Find 127 sgRNAs with CRISPR-Local
Find 245 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATAATTACACCACAAATTT+TGG | 0.120500 | 4.3:-29874961 | MS.gene031655:CDS |
| GTGTCTCTCCTTCTCTTTCA+TGG | 0.160134 | 4.3:+29876905 | None:intergenic |
| GTGCACTGTGGGACTGTTTC+AGG | 0.229105 | 4.3:-29874870 | MS.gene031655:CDS |
| CGGATATTTGGAAGAATATT+AGG | 0.243736 | 4.3:+29874925 | None:intergenic |
| AATTGAAAGACATACATTTA+AGG | 0.245998 | 4.3:+29876740 | None:intergenic |
| CCAGAGTCAAATGCCCTTCT+AGG | 0.246541 | 4.3:+29874350 | None:intergenic |
| CAGTCCCACAGTGCACATTT+TGG | 0.247458 | 4.3:+29874877 | None:intergenic |
| GAAGGTGGAGGGCGGATATT+TGG | 0.256860 | 4.3:+29874913 | None:intergenic |
| ATGCCACCAGGTCGCAAAAT+TGG | 0.260053 | 4.3:+29874763 | None:intergenic |
| GCCATGCCTGAGCTATTTAA+AGG | 0.279844 | 4.3:+29875162 | None:intergenic |
| GGGAGCCTTGGGTCGTTTCC+CGG | 0.307766 | 4.3:-29876613 | MS.gene031655:CDS |
| ATTCGGTTTGAATCAAGATA+TGG | 0.326854 | 4.3:-29875121 | MS.gene031655:CDS |
| GGAGCCTTGGGTCGTTTCCC+GGG | 0.338311 | 4.3:-29876612 | MS.gene031655:CDS |
| TTCTTGAGCGTGAAACTGTT+AGG | 0.354570 | 4.3:-29874394 | MS.gene031655:CDS |
| TAGTAGTAATCACGAGCTTT+TGG | 0.358062 | 4.3:-29874812 | MS.gene031655:CDS |
| TGTTCTTTGACCAGCCTAGA+AGG | 0.366077 | 4.3:-29874364 | MS.gene031655:CDS |
| CAACCACGCCCACAATAATC+AGG | 0.369577 | 4.3:+29874305 | None:intergenic |
| AAAGCCCCTTGGAATGCTTC+AGG | 0.372413 | 4.3:-29874646 | MS.gene031655:intron |
| ATTCTATAGGATGGGAGCCT+TGG | 0.372943 | 4.3:-29876625 | MS.gene031655:intron |
| CTTTCTTGCAGACTGAAGAT+TGG | 0.379338 | 4.3:+29876854 | None:intergenic |
| TTCTATAGGATGGGAGCCTT+GGG | 0.379881 | 4.3:-29876624 | MS.gene031655:intron |
| GAGGCCAAGTCTCAGAATAT+TGG | 0.400679 | 4.3:-29873939 | MS.gene031655:CDS |
| CCAACTGTTGCAAGGATTTG+AGG | 0.409048 | 4.3:-29876581 | MS.gene031655:CDS |
| CAGCTCTGATTTAATTTGTC+GGG | 0.416431 | 4.3:-29875079 | MS.gene031655:CDS |
| TTTCTGGTAAGCAACCTTCA+TGG | 0.419867 | 4.3:+29874165 | None:intergenic |
| CAATCTTCAGTCTGCAAGAA+AGG | 0.425162 | 4.3:-29876853 | MS.gene031655:CDS |
| CAACAGTTGGGCTAATTCCC+CGG | 0.428013 | 4.3:+29876594 | None:intergenic |
| CCTCAAATCCTTGCAACAGT+TGG | 0.442007 | 4.3:+29876581 | None:intergenic |
| GACTGTTTCAGGCCTGCTCA+AGG | 0.443030 | 4.3:-29874859 | MS.gene031655:CDS |
| GCTGCTCCGTCGCCAGATGA+TGG | 0.448458 | 4.3:-29873984 | MS.gene031655:CDS |
| GCTCAATTTAATCTTGAAGA+AGG | 0.449693 | 4.3:-29875012 | MS.gene031655:CDS |
| ATCAGTCCTCTGACTAAACC+TGG | 0.453669 | 4.3:-29876544 | MS.gene031655:CDS |
| CCTAGAAGGGCATTTGACTC+TGG | 0.453832 | 4.3:-29874350 | MS.gene031655:CDS |
| TAGCTCAGGCATGGCTCAGT+TGG | 0.463141 | 4.3:-29875154 | MS.gene031655:CDS |
| TGCTGATTTACAAAACAAGA+TGG | 0.465472 | 4.3:-29874021 | MS.gene031655:CDS |
| TGAAGCAGCACCTTCACACT+TGG | 0.468496 | 4.3:+29874672 | None:intergenic |
| GCTAGGAAAGCAGAAGGTGG+AGG | 0.468704 | 4.3:+29874901 | None:intergenic |
| TGCCACTCAACATAATCAAC+AGG | 0.470016 | 4.3:+29874212 | None:intergenic |
| CTCAAATCCTTGCAACAGTT+GGG | 0.481803 | 4.3:+29876582 | None:intergenic |
| AGCAGTCCTTTAAATAGCTC+AGG | 0.483033 | 4.3:-29875168 | MS.gene031655:CDS |
| TCTTGAGCGTGAAACTGTTA+GGG | 0.483389 | 4.3:-29874393 | MS.gene031655:CDS |
| CAGGCCAATATTCTGAGACT+TGG | 0.484185 | 4.3:+29873935 | None:intergenic |
| CTGATTATTGTGGGCGTGGT+TGG | 0.485513 | 4.3:-29874304 | MS.gene031655:CDS |
| TCCTAAAGGAAAAGTGACTA+AGG | 0.496242 | 4.3:-29874051 | MS.gene031655:CDS |
| CACATGGTGAATAAGATTCA+AGG | 0.499116 | 4.3:-29876885 | MS.gene031655:CDS |
| CTGCTTCAACGAAAGCCCCT+TGG | 0.502920 | 4.3:-29874657 | MS.gene031655:CDS |
| AACAGTTGGGCTAATTCCCC+GGG | 0.504414 | 4.3:+29876595 | None:intergenic |
| CACTGCTCTAACCCTTGAGC+AGG | 0.504462 | 4.3:+29874847 | None:intergenic |
| CATACATTTAAGGAGGTAGC+TGG | 0.508452 | 4.3:+29876750 | None:intergenic |
| GATTACTACTACAGTAATCC+TGG | 0.514174 | 4.3:+29874824 | None:intergenic |
| ATCAAGGAAGCAGGTGATGA+AGG | 0.514451 | 4.3:-29874276 | MS.gene031655:CDS |
| ATTTGTCGGGACCACAGCCT+CGG | 0.516229 | 4.3:-29875066 | MS.gene031655:CDS |
| AGTCAAATGCCCTTCTAGGC+TGG | 0.516631 | 4.3:+29874354 | None:intergenic |
| TGCTGTTCTTGCAAAGACAC+TGG | 0.517048 | 4.3:-29874713 | MS.gene031655:CDS |
| AAAGTTGTCTCCAAAATTTG+TGG | 0.522041 | 4.3:+29874951 | None:intergenic |
| ACAGCTCTGATTTAATTTGT+CGG | 0.522169 | 4.3:-29875080 | MS.gene031655:CDS |
| GAGCCTTGGGTCGTTTCCCG+GGG | 0.527121 | 4.3:-29876611 | MS.gene031655:CDS |
| TTGTTGATAAGCAACGATCA+TGG | 0.529822 | 4.3:+29874135 | None:intergenic |
| TTTGTCGGGACCACAGCCTC+GGG | 0.529845 | 4.3:-29875065 | MS.gene031655:CDS |
| ATCCCTGATTATTGTGGGCG+TGG | 0.530254 | 4.3:-29874308 | MS.gene031655:CDS |
| GGGCATTTGACTCTGGAACT+AGG | 0.533243 | 4.3:-29874343 | MS.gene031655:CDS |
| AAGCAGGTGATGAAGGAACA+TGG | 0.536829 | 4.3:-29874269 | MS.gene031655:CDS |
| AGATCCATCCCTGATTATTG+TGG | 0.539369 | 4.3:-29874314 | MS.gene031655:CDS |
| GATCCATCCCTGATTATTGT+GGG | 0.542160 | 4.3:-29874313 | MS.gene031655:CDS |
| GAAGCAGCACCTTCACACTT+GGG | 0.543360 | 4.3:+29874673 | None:intergenic |
| ACTGTTTCAGGCCTGCTCAA+GGG | 0.545418 | 4.3:-29874858 | MS.gene031655:CDS |
| TCAGAAATCCATGAAAGAGA+AGG | 0.547366 | 4.3:-29876913 | MS.gene031655:CDS |
| CTGCGTTGTACCCGAGGCTG+TGG | 0.548854 | 4.3:+29875055 | None:intergenic |
| TACTAACCTGAAGCATTCCA+AGG | 0.549098 | 4.3:+29874640 | None:intergenic |
| TCAACATAATCAACAGGCTG+TGG | 0.549517 | 4.3:+29874218 | None:intergenic |
| GCTGATTTACAAAACAAGAT+GGG | 0.550937 | 4.3:-29874020 | MS.gene031655:CDS |
| TATGAAATCAATAACCATGA+AGG | 0.551452 | 4.3:-29874179 | MS.gene031655:CDS |
| CGAAAGTATGACCTAGTGAC+TGG | 0.552272 | 4.3:+29875214 | None:intergenic |
| TTACTTCTGCGTTGTACCCG+AGG | 0.555658 | 4.3:+29875049 | None:intergenic |
| AGCCCCAAAATGTGCACTGT+GGG | 0.556411 | 4.3:-29874881 | MS.gene031655:CDS |
| AGGTTTAGTCAGAGGACTGA+TGG | 0.559286 | 4.3:+29876546 | None:intergenic |
| GTTCTTTGACCAGCCTAGAA+GGG | 0.561727 | 4.3:-29874363 | MS.gene031655:CDS |
| CTAGGAAAGCAGAAGGTGGA+GGG | 0.562417 | 4.3:+29874902 | None:intergenic |
| TCAGTTGCTTCGAGAGTGGA+AGG | 0.563881 | 4.3:-29876787 | MS.gene031655:CDS |
| AAAGACACTGGGAAAAGAAG+TGG | 0.569750 | 4.3:-29874701 | MS.gene031655:CDS |
| TAATCAGTGTTAAACAGCCC+AGG | 0.573081 | 4.3:+29876526 | None:intergenic |
| TTGGCATGAATCAAGGAAGC+AGG | 0.575003 | 4.3:-29874285 | MS.gene031655:CDS |
| TCCTTTAAATAGCTCAGGCA+TGG | 0.578059 | 4.3:-29875163 | MS.gene031655:CDS |
| TGCATCAGTTGCTTCGAGAG+TGG | 0.578160 | 4.3:-29876791 | MS.gene031655:CDS |
| TACTGATATTCTCATCATTG+AGG | 0.580303 | 4.3:-29876820 | MS.gene031655:CDS |
| GGCGTGGTTGGCATGAATCA+AGG | 0.581508 | 4.3:-29874292 | MS.gene031655:CDS |
| GAATTAGCCCAACTGTTGCA+AGG | 0.582018 | 4.3:-29876589 | MS.gene031655:CDS |
| AAGCAGCACCTTCACACTTG+GGG | 0.584353 | 4.3:+29874674 | None:intergenic |
| AGCAGGTGATGAAGGAACAT+GGG | 0.587152 | 4.3:-29874268 | MS.gene031655:CDS |
| AGATGATGGAAAATCTGTCA+AGG | 0.589213 | 4.3:-29873970 | MS.gene031655:CDS |
| TCAAGGGTTAGAGCAGTGCC+AGG | 0.589320 | 4.3:-29874842 | MS.gene031655:CDS |
| GCTGTTCTTGCAAAGACACT+GGG | 0.597625 | 4.3:-29874712 | MS.gene031655:CDS |
| GATATGGATCACAACGCTGT+AGG | 0.601822 | 4.3:-29875105 | MS.gene031655:CDS |
| AACAGCCCAGGTTTAGTCAG+AGG | 0.603193 | 4.3:+29876538 | None:intergenic |
| ACAAAAGAGATCATATTACA+TGG | 0.603201 | 4.3:-29874243 | MS.gene031655:CDS |
| GTGGGCATCCCCAAGTGTGA+AGG | 0.608412 | 4.3:-29874682 | MS.gene031655:CDS |
| GTATGATGAAAGAAAACTCA+GGG | 0.611743 | 4.3:-29876959 | MS.gene031655:CDS |
| TGAAAGACATACATTTAAGG+AGG | 0.614720 | 4.3:+29876743 | None:intergenic |
| AATATTCTGAGACTTGGCCT+CGG | 0.616309 | 4.3:+29873941 | None:intergenic |
| GGTATGATGAAAGAAAACTC+AGG | 0.617008 | 4.3:-29876960 | MS.gene031655:CDS |
| ACATGGTGAATAAGATTCAA+GGG | 0.617617 | 4.3:-29876884 | MS.gene031655:CDS |
| TCACTAGGTCATACTTTCGA+AGG | 0.619681 | 4.3:-29875210 | MS.gene031655:CDS |
| AAGACACTGGGAAAAGAAGT+GGG | 0.621213 | 4.3:-29874700 | MS.gene031655:CDS |
| ACGCCCACAATAATCAGGGA+TGG | 0.621905 | 4.3:+29874310 | None:intergenic |
| AGCGTGAAACTGTTAGGGAG+TGG | 0.622146 | 4.3:-29874388 | MS.gene031655:CDS |
| GGGGCTAGGAAAGCAGAAGG+TGG | 0.622810 | 4.3:+29874898 | None:intergenic |
| ACTAACCTGAAGCATTCCAA+GGG | 0.625065 | 4.3:+29874641 | None:intergenic |
| TTTGATAATAACCAGTCACT+AGG | 0.626203 | 4.3:-29875225 | MS.gene031655:CDS |
| TTTGGGGCTAGGAAAGCAGA+AGG | 0.630230 | 4.3:+29874895 | None:intergenic |
| GATGATGGAAAATCTGTCAA+GGG | 0.632198 | 4.3:-29873969 | MS.gene031655:CDS |
| GCAAGAACAGCAGCAAACAA+AGG | 0.637682 | 4.3:+29874724 | None:intergenic |
| GTCTGTATAATGCACAACCA+TGG | 0.640803 | 4.3:+29874105 | None:intergenic |
| AACCACGCCCACAATAATCA+GGG | 0.641167 | 4.3:+29874306 | None:intergenic |
| GCAGGTGATGAAGGAACATG+GGG | 0.643689 | 4.3:-29874267 | MS.gene031655:CDS |
| ATTCCCCGGGAAACGACCCA+AGG | 0.645718 | 4.3:+29876608 | None:intergenic |
| AGCCTGTTGATTATGTTGAG+TGG | 0.648782 | 4.3:-29874214 | MS.gene031655:CDS |
| TCAGTCCTCTGACTAAACCT+GGG | 0.653984 | 4.3:-29876543 | MS.gene031655:CDS |
| TCTTTCACATCAATGCCACC+AGG | 0.663784 | 4.3:+29874751 | None:intergenic |
| GGAAAGCAGAAGGTGGAGGG+CGG | 0.666552 | 4.3:+29874905 | None:intergenic |
| CAACATAATCAACAGGCTGT+GGG | 0.679528 | 4.3:+29874219 | None:intergenic |
| ATGATGAAAGAAAACTCAGG+GGG | 0.696312 | 4.3:-29876957 | MS.gene031655:CDS |
| GAAAGAGAAGGAGAGACACA+TGG | 0.697093 | 4.3:-29876901 | MS.gene031655:CDS |
| TAGCCCCAAAATGTGCACTG+TGG | 0.701568 | 4.3:-29874882 | MS.gene031655:CDS |
| GGTGGCATTGATGTGAAAGA+CGG | 0.715531 | 4.3:-29874748 | MS.gene031655:CDS |
| CTAACCTGAAGCATTCCAAG+GGG | 0.741948 | 4.3:+29874642 | None:intergenic |
| TATGATGAAAGAAAACTCAG+GGG | 0.752762 | 4.3:-29876958 | MS.gene031655:CDS |
| CAGGTGATGAAGGAACATGG+GGG | 0.853574 | 4.3:-29874266 | MS.gene031655:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+AGG | + | chr4.3:29874618-29874599 | None:intergenic | 0.0% |
| !! | TATATATATATATATATATA+GGG | + | chr4.3:29874617-29874598 | None:intergenic | 0.0% |
| !! | CAAAAAAAAAAAAAAAAAAG+AGG | + | chr4.3:29875501-29875520 | None:intergenic | 10.0% |
| !! | ATGTATTTATATGTATATGT+TGG | - | chr4.3:29874231-29874250 | MS.gene031655:CDS | 15.0% |
| !! | ATTAGAAAAGAAAACAATTA+GGG | + | chr4.3:29874680-29874699 | None:intergenic | 15.0% |
| !!! | ATGTTAAATATTTCCATTTT+AGG | + | chr4.3:29875211-29875230 | None:intergenic | 15.0% |
| !!! | TAGATTAGTTTATTAAACTA+TGG | + | chr4.3:29874838-29874857 | None:intergenic | 15.0% |
| !! | AAATATTTAACATAGAACCT+AGG | - | chr4.3:29875218-29875237 | MS.gene031655:CDS | 20.0% |
| !! | AATATTTAACATAGAACCTA+GGG | - | chr4.3:29875219-29875238 | MS.gene031655:CDS | 20.0% |
| !! | AATTGAAAGACATACATTTA+AGG | + | chr4.3:29874143-29874162 | None:intergenic | 20.0% |
| !! | ACAGTTATATATATAAGCTA+TGG | + | chr4.3:29875245-29875264 | None:intergenic | 20.0% |
| !! | ATATATATATAGGGGTTATA+CGG | + | chr4.3:29874589-29874608 | None:intergenic | 20.0% |
| !! | ATTAAATGTGATATAGAAGA+AGG | - | chr4.3:29876338-29876357 | MS.gene031655:intron | 20.0% |
| !! | CATAATTTAGAAAAGGAAAT+CGG | + | chr4.3:29874750-29874769 | None:intergenic | 20.0% |
| !! | CATTAGAAAAGAAAACAATT+AGG | + | chr4.3:29874681-29874700 | None:intergenic | 20.0% |
| !! | TTATCAACAAAAATTAACCA+TGG | - | chr4.3:29876758-29876777 | MS.gene031655:CDS | 20.0% |
| !! | TTTGTGACATAATTTAGAAA+AGG | + | chr4.3:29874757-29874776 | None:intergenic | 20.0% |
| !!! | ATTCAGTATTTTCAGAAATA+TGG | - | chr4.3:29875335-29875354 | MS.gene031655:intron | 20.0% |
| !!! | TATCAGTAATGTTATTTTGA+TGG | + | chr4.3:29874380-29874399 | None:intergenic | 20.0% |
| !!! | TTTTTTAACCTTCTTGTTTA+CGG | - | chr4.3:29874918-29874937 | MS.gene031655:CDS | 20.0% |
| ! | AAAAGAAAACAATTAGGGTA+AGG | + | chr4.3:29874675-29874694 | None:intergenic | 25.0% |
| ! | AACACAGATACAGATATTAT+TGG | + | chr4.3:29874179-29874198 | None:intergenic | 25.0% |
| ! | ACAAAAGAGATCATATTACA+TGG | - | chr4.3:29876637-29876656 | MS.gene031655:intron | 25.0% |
| ! | ACAAATGAATTTCAACAAGT+TGG | + | chr4.3:29875060-29875079 | None:intergenic | 25.0% |
| ! | GAGAATCTTCTATATATCTT+TGG | - | chr4.3:29874446-29874465 | MS.gene031655:intron | 25.0% |
| ! | GATAAAAAGAAAAGTCCTAA+AGG | - | chr4.3:29876815-29876834 | MS.gene031655:CDS | 25.0% |
| ! | TATATTTCATATCTCTTTGC+AGG | + | chr4.3:29874212-29874231 | None:intergenic | 25.0% |
| ! | TATGAAATCAATAACCATGA+AGG | - | chr4.3:29876701-29876720 | MS.gene031655:intron | 25.0% |
| ! | TTCTAAATTATGTCACAAAC+TGG | - | chr4.3:29874758-29874777 | MS.gene031655:CDS | 25.0% |
| !! | GATAATTACACCACAAATTT+TGG | - | chr4.3:29875919-29875938 | MS.gene031655:intron | 25.0% |
| !! | TTGTTGAAATTCATTTGTTG+AGG | - | chr4.3:29875062-29875081 | MS.gene031655:CDS | 25.0% |
| !! | TTTCTTTAAGAGATAACAAC+TGG | - | chr4.3:29875609-29875628 | MS.gene031655:intron | 25.0% |
| !!! | TAGCAATTATGAGTTTTATC+AGG | - | chr4.3:29874398-29874417 | MS.gene031655:CDS | 25.0% |
| !!! | TTTTTAACCTTCTTGTTTAC+GGG | - | chr4.3:29874919-29874938 | MS.gene031655:CDS | 25.0% |
| AAAGTTGTCTCCAAAATTTG+TGG | + | chr4.3:29875932-29875951 | None:intergenic | 30.0% | |
| AAGTGGTTAATTAAGTGAAG+TGG | + | chr4.3:29875173-29875192 | None:intergenic | 30.0% | |
| ACATGGTGAATAAGATTCAA+GGG | - | chr4.3:29873996-29874015 | MS.gene031655:CDS | 30.0% | |
| ATCTTGCAAATTCTACAACT+AGG | - | chr4.3:29876309-29876328 | MS.gene031655:intron | 30.0% | |
| CACAATGTTAGTATTATGCT+GGG | - | chr4.3:29874493-29874512 | MS.gene031655:intron | 30.0% | |
| CGGATATTTGGAAGAATATT+AGG | + | chr4.3:29875958-29875977 | None:intergenic | 30.0% | |
| CTAATCTAATTCCTATCATG+TGG | - | chr4.3:29874850-29874869 | MS.gene031655:CDS | 30.0% | |
| GCTCAATTTAATCTTGAAGA+AGG | - | chr4.3:29875868-29875887 | MS.gene031655:intron | 30.0% | |
| GTTATCTCTTAAAGAAAAGC+AGG | + | chr4.3:29875606-29875625 | None:intergenic | 30.0% | |
| TAAAAAATGTGTCAGCCAAT+AGG | + | chr4.3:29874905-29874924 | None:intergenic | 30.0% | |
| TACTGATATTCTCATCATTG+AGG | - | chr4.3:29874060-29874079 | MS.gene031655:CDS | 30.0% | |
| TCACAATGTTAGTATTATGC+TGG | - | chr4.3:29874492-29874511 | MS.gene031655:intron | 30.0% | |
| TGAAAGACATACATTTAAGG+AGG | + | chr4.3:29874140-29874159 | None:intergenic | 30.0% | |
| TGAACTGAAAAATCAGAACA+AGG | + | chr4.3:29875029-29875048 | None:intergenic | 30.0% | |
| TGTATATGTTGGCATTCTAT+AGG | - | chr4.3:29874242-29874261 | MS.gene031655:CDS | 30.0% | |
| TTAATCACACCACAAATGAA+AGG | + | chr4.3:29875442-29875461 | None:intergenic | 30.0% | |
| TTTCTTTCGTCTATTTGGTT+GGG | - | chr4.3:29876407-29876426 | MS.gene031655:intron | 30.0% | |
| ! | ACTTGTTTCTTTCGTCTATT+TGG | - | chr4.3:29876402-29876421 | MS.gene031655:intron | 30.0% |
| ! | ATTCGGTTTGAATCAAGATA+TGG | - | chr4.3:29875759-29875778 | MS.gene031655:intron | 30.0% |
| ! | CAGTTGGATTTTCATTCATT+CGG | - | chr4.3:29875742-29875761 | MS.gene031655:intron | 30.0% |
| ! | GATGAGTATGATCAACTTTT+CGG | - | chr4.3:29875895-29875914 | MS.gene031655:intron | 30.0% |
| ! | GCTGATTTACAAAACAAGAT+GGG | - | chr4.3:29876860-29876879 | MS.gene031655:CDS | 30.0% |
| ! | TTTGATAATAACCAGTCACT+AGG | - | chr4.3:29875655-29875674 | MS.gene031655:intron | 30.0% |
| !! | ACAGCTCTGATTTAATTTGT+CGG | - | chr4.3:29875800-29875819 | MS.gene031655:intron | 30.0% |
| !! | CAATTATGAGTTTTATCAGG+AGG | - | chr4.3:29874401-29874420 | MS.gene031655:CDS | 30.0% |
| !! | CTTAGAAAACATTTCTAGTC+AGG | - | chr4.3:29875106-29875125 | MS.gene031655:CDS | 30.0% |
| !! | GATTATTAGCCTTTCATTTG+TGG | - | chr4.3:29875430-29875449 | MS.gene031655:intron | 30.0% |
| !! | GTTTTCTAAGAGTTCTCTTT+TGG | + | chr4.3:29875096-29875115 | None:intergenic | 30.0% |
| !! | TGCTGATTTACAAAACAAGA+TGG | - | chr4.3:29876859-29876878 | MS.gene031655:CDS | 30.0% |
| !! | TTTTAACCTTCTTGTTTACG+GGG | - | chr4.3:29874920-29874939 | MS.gene031655:CDS | 30.0% |
| !!! | CGATCATGGTTATTTTTTTC+TGG | + | chr4.3:29876734-29876753 | None:intergenic | 30.0% |
| ATATATAGGGGTTATACGGA+TGG | + | chr4.3:29874585-29874604 | None:intergenic | 35.0% | |
| ATGATGAAAGAAAACTCAGG+GGG | - | chr4.3:29873923-29873942 | MS.gene031655:CDS | 35.0% | |
| ATGTTGGCATTCTATAGGAT+GGG | - | chr4.3:29874247-29874266 | MS.gene031655:CDS | 35.0% | |
| ATTAGACACAATCGTACAAC+CGG | + | chr4.3:29874787-29874806 | None:intergenic | 35.0% | |
| CACATGGTGAATAAGATTCA+AGG | - | chr4.3:29873995-29874014 | MS.gene031655:CDS | 35.0% | |
| CACTTAATTAACCACTTGAG+TGG | - | chr4.3:29875176-29875195 | MS.gene031655:CDS | 35.0% | |
| CGGAATAGTAGAACAATGTA+AGG | + | chr4.3:29874730-29874749 | None:intergenic | 35.0% | |
| CTAATAATCGTACTAGCTGA+TGG | + | chr4.3:29875419-29875438 | None:intergenic | 35.0% | |
| GATTACTACTACAGTAATCC+TGG | + | chr4.3:29876059-29876078 | None:intergenic | 35.0% | |
| GTTTCTTTCGTCTATTTGGT+TGG | - | chr4.3:29876406-29876425 | MS.gene031655:intron | 35.0% | |
| TATATATAAGCTATGGCCCT+AGG | + | chr4.3:29875238-29875257 | None:intergenic | 35.0% | |
| TATGTTGGCATTCTATAGGA+TGG | - | chr4.3:29874246-29874265 | MS.gene031655:CDS | 35.0% | |
| TCAAAACATTTCTGCACGAA+TGG | + | chr4.3:29875640-29875659 | None:intergenic | 35.0% | |
| TCAGAAATCCATGAAAGAGA+AGG | - | chr4.3:29873967-29873986 | MS.gene031655:CDS | 35.0% | |
| TCCTAAAGGAAAAGTGACTA+AGG | - | chr4.3:29876829-29876848 | MS.gene031655:CDS | 35.0% | |
| TGAGTTTCTTTCACTTGTTC+TGG | - | chr4.3:29874424-29874443 | MS.gene031655:intron | 35.0% | |
| TGTTAGTATTATGCTGGGAT+TGG | - | chr4.3:29874498-29874517 | MS.gene031655:intron | 35.0% | |
| TTCATATCTCTTTGCAGGAT+GGG | + | chr4.3:29874207-29874226 | None:intergenic | 35.0% | |
| TTTCATATCTCTTTGCAGGA+TGG | + | chr4.3:29874208-29874227 | None:intergenic | 35.0% | |
| ! | AGTGATACACTTTGGGAATT+GGG | + | chr4.3:29874962-29874981 | None:intergenic | 35.0% |
| ! | GTGGTTAGTTGTTCCTAAAA+TGG | - | chr4.3:29875195-29875214 | MS.gene031655:CDS | 35.0% |
| ! | TAGTAGTAATCACGAGCTTT+TGG | - | chr4.3:29876068-29876087 | MS.gene031655:intron | 35.0% |
| ! | TTGACAGATTTTCCATCATC+TGG | + | chr4.3:29876911-29876930 | None:intergenic | 35.0% |
| ! | TTGTTGATAAGCAACGATCA+TGG | + | chr4.3:29876748-29876767 | None:intergenic | 35.0% |
| ! | TTTAACCTTCTTGTTTACGG+GGG | - | chr4.3:29874921-29874940 | MS.gene031655:CDS | 35.0% |
| !! | AGATGATGGAAAATCTGTCA+AGG | - | chr4.3:29876910-29876929 | MS.gene031655:CDS | 35.0% |
| !! | CAGCTCTGATTTAATTTGTC+GGG | - | chr4.3:29875801-29875820 | MS.gene031655:intron | 35.0% |
| !! | GATGATGGAAAATCTGTCAA+GGG | - | chr4.3:29876911-29876930 | MS.gene031655:CDS | 35.0% |
| !!! | TCCTTAGTCACTTTTCCTTT+AGG | + | chr4.3:29876833-29876852 | None:intergenic | 35.0% |
| AAAGACACTGGGAAAAGAAG+TGG | - | chr4.3:29876179-29876198 | MS.gene031655:intron | 40.0% | |
| AAGACACTGGGAAAAGAAGT+GGG | - | chr4.3:29876180-29876199 | MS.gene031655:intron | 40.0% | |
| AATTCCTATCATGTGGTGTG+CGG | - | chr4.3:29874857-29874876 | MS.gene031655:CDS | 40.0% | |
| AGATCCATCCCTGATTATTG+TGG | - | chr4.3:29876566-29876585 | MS.gene031655:CDS | 40.0% | |
| AGCAGTCCTTTAAATAGCTC+AGG | - | chr4.3:29875712-29875731 | MS.gene031655:intron | 40.0% | |
| CAACATAATCAACAGGCTGT+GGG | + | chr4.3:29876664-29876683 | None:intergenic | 40.0% | |
| CAATCTTCAGTCTGCAAGAA+AGG | - | chr4.3:29874027-29874046 | MS.gene031655:CDS | 40.0% | |
| CATACATTTAAGGAGGTAGC+TGG | + | chr4.3:29874133-29874152 | None:intergenic | 40.0% | |
| CCAAGTCATCTGATCTCTTT+AGG | - | chr4.3:29874992-29875011 | MS.gene031655:CDS | 40.0% | |
| CCTAAAGAGATCAGATGACT+TGG | + | chr4.3:29874995-29875014 | None:intergenic | 40.0% | |
| CTCAAATCCTTGCAACAGTT+GGG | + | chr4.3:29874301-29874320 | None:intergenic | 40.0% | |
| CTTTCTTGCAGACTGAAGAT+TGG | + | chr4.3:29874029-29874048 | None:intergenic | 40.0% | |
| GAAAACTCAGGGGGAAAATA+TGG | - | chr4.3:29873932-29873951 | MS.gene031655:CDS | 40.0% | |
| GATCCATCCCTGATTATTGT+GGG | - | chr4.3:29876567-29876586 | MS.gene031655:CDS | 40.0% | |
| GTCTGTATAATGCACAACCA+TGG | + | chr4.3:29876778-29876797 | None:intergenic | 40.0% | |
| GTTCATTCAGGCAAACCTAT+TGG | - | chr4.3:29874887-29874906 | MS.gene031655:CDS | 40.0% | |
| TAAGGAGTGGAGTGATAAGA+AGG | + | chr4.3:29874539-29874558 | None:intergenic | 40.0% | |
| TAATCAGTGTTAAACAGCCC+AGG | + | chr4.3:29874357-29874376 | None:intergenic | 40.0% | |
| TAATCGTACTAGCTGATGGA+TGG | + | chr4.3:29875415-29875434 | None:intergenic | 40.0% | |
| TCAACATAATCAACAGGCTG+TGG | + | chr4.3:29876665-29876684 | None:intergenic | 40.0% | |
| TCACTAGGTCATACTTTCGA+AGG | - | chr4.3:29875670-29875689 | MS.gene031655:intron | 40.0% | |
| TCATATCTCTTTGCAGGATG+GGG | + | chr4.3:29874206-29874225 | None:intergenic | 40.0% | |
| TCCTTTAAATAGCTCAGGCA+TGG | - | chr4.3:29875717-29875736 | MS.gene031655:intron | 40.0% | |
| TCTTGAGCGTGAAACTGTTA+GGG | - | chr4.3:29876487-29876506 | MS.gene031655:CDS | 40.0% | |
| TGCCACTCAACATAATCAAC+AGG | + | chr4.3:29876671-29876690 | None:intergenic | 40.0% | |
| TTCTTGAGCGTGAAACTGTT+AGG | - | chr4.3:29876486-29876505 | MS.gene031655:CDS | 40.0% | |
| TTGGCAAAAAGTGAGGATGA+GGG | - | chr4.3:29876087-29876106 | MS.gene031655:intron | 40.0% | |
| TTTGGCAAAAAGTGAGGATG+AGG | - | chr4.3:29876086-29876105 | MS.gene031655:intron | 40.0% | |
| ! | ACTAACCTGAAGCATTCCAA+GGG | + | chr4.3:29876242-29876261 | None:intergenic | 40.0% |
| ! | AGCCTGTTGATTATGTTGAG+TGG | - | chr4.3:29876666-29876685 | MS.gene031655:intron | 40.0% |
| ! | ATACACTTTGGGAATTGGGT+GGG | + | chr4.3:29874958-29874977 | None:intergenic | 40.0% |
| ! | GAGTGATACACTTTGGGAAT+TGG | + | chr4.3:29874963-29874982 | None:intergenic | 40.0% |
| ! | TACTAACCTGAAGCATTCCA+AGG | + | chr4.3:29876243-29876262 | None:intergenic | 40.0% |
| ! | TTATGTCACAAACTGGTCTC+CGG | - | chr4.3:29874765-29874784 | MS.gene031655:CDS | 40.0% |
| ! | TTTCTGGTAAGCAACCTTCA+TGG | + | chr4.3:29876718-29876737 | None:intergenic | 40.0% |
| !! | AATATTCTGAGACTTGGCCT+CGG | + | chr4.3:29876942-29876961 | None:intergenic | 40.0% |
| !! | AGTCAGGACTAGTTAACCAT+TGG | - | chr4.3:29875122-29875141 | MS.gene031655:CDS | 40.0% |
| !! | GCGTGACATGTTAATTTGTC+TGG | - | chr4.3:29874630-29874649 | MS.gene031655:intron | 40.0% |
| !!! | TGCGGTCTTTTAGTTCATTC+AGG | - | chr4.3:29874875-29874894 | MS.gene031655:CDS | 40.0% |
| AAAGTGTATCACTCGAGCTC+TGG | - | chr4.3:29874969-29874988 | MS.gene031655:CDS | 45.0% | |
| AACCACGCCCACAATAATCA+GGG | + | chr4.3:29876577-29876596 | None:intergenic | 45.0% | |
| AAGCAGGTGATGAAGGAACA+TGG | - | chr4.3:29876611-29876630 | MS.gene031655:CDS | 45.0% | |
| AGAGCTCGAGTGATACACTT+TGG | + | chr4.3:29874970-29874989 | None:intergenic | 45.0% | |
| AGCAGGTGATGAAGGAACAT+GGG | - | chr4.3:29876612-29876631 | MS.gene031655:CDS | 45.0% | |
| AGGTTTAGTCAGAGGACTGA+TGG | + | chr4.3:29874337-29874356 | None:intergenic | 45.0% | |
| ATCAAGGAAGCAGGTGATGA+AGG | - | chr4.3:29876604-29876623 | MS.gene031655:CDS | 45.0% | |
| ATCAGTCCTCTGACTAAACC+TGG | - | chr4.3:29874336-29874355 | MS.gene031655:CDS | 45.0% | |
| ATCTGTCAAGGGAAAAACCG+AGG | - | chr4.3:29876922-29876941 | MS.gene031655:CDS | 45.0% | |
| ATTCTATAGGATGGGAGCCT+TGG | - | chr4.3:29874255-29874274 | MS.gene031655:CDS | 45.0% | |
| CCAACTGTTGCAAGGATTTG+AGG | - | chr4.3:29874299-29874318 | MS.gene031655:CDS | 45.0% | |
| CCTCAAATCCTTGCAACAGT+TGG | + | chr4.3:29874302-29874321 | None:intergenic | 45.0% | |
| GAAAGAGAAGGAGAGACACA+TGG | - | chr4.3:29873979-29873998 | MS.gene031655:CDS | 45.0% | |
| GAATTAGCCCAACTGTTGCA+AGG | - | chr4.3:29874291-29874310 | MS.gene031655:CDS | 45.0% | |
| GAGCTCGAGTGATACACTTT+GGG | + | chr4.3:29874969-29874988 | None:intergenic | 45.0% | |
| GAGGCCAAGTCTCAGAATAT+TGG | - | chr4.3:29876941-29876960 | MS.gene031655:CDS | 45.0% | |
| GATATGGATCACAACGCTGT+AGG | - | chr4.3:29875775-29875794 | MS.gene031655:intron | 45.0% | |
| GCAAGAACAGCAGCAAACAA+AGG | + | chr4.3:29876159-29876178 | None:intergenic | 45.0% | |
| GCCATGCCTGAGCTATTTAA+AGG | + | chr4.3:29875721-29875740 | None:intergenic | 45.0% | |
| GCTGTTCTTGCAAAGACACT+GGG | - | chr4.3:29876168-29876187 | MS.gene031655:intron | 45.0% | |
| GGAACAACTAACCACTCAAG+TGG | + | chr4.3:29875190-29875209 | None:intergenic | 45.0% | |
| GTAATCCCCCGTAAACAAGA+AGG | + | chr4.3:29874929-29874948 | None:intergenic | 45.0% | |
| GTGGAGTGATAAGAAGGTTG+AGG | + | chr4.3:29874533-29874552 | None:intergenic | 45.0% | |
| GTGTCTCTCCTTCTCTTTCA+TGG | + | chr4.3:29873978-29873997 | None:intergenic | 45.0% | |
| GTTCTTTGACCAGCCTAGAA+GGG | - | chr4.3:29876517-29876536 | MS.gene031655:CDS | 45.0% | |
| TCAGTCCTCTGACTAAACCT+GGG | - | chr4.3:29874337-29874356 | MS.gene031655:CDS | 45.0% | |
| TCTTTCACATCAATGCCACC+AGG | + | chr4.3:29876132-29876151 | None:intergenic | 45.0% | |
| TGCTGTTCTTGCAAAGACAC+TGG | - | chr4.3:29876167-29876186 | MS.gene031655:intron | 45.0% | |
| TGTTCTTTGACCAGCCTAGA+AGG | - | chr4.3:29876516-29876535 | MS.gene031655:CDS | 45.0% | |
| TTCTATAGGATGGGAGCCTT+GGG | - | chr4.3:29874256-29874275 | MS.gene031655:CDS | 45.0% | |
| TTGGCATGAATCAAGGAAGC+AGG | - | chr4.3:29876595-29876614 | MS.gene031655:CDS | 45.0% | |
| ! | AAGACTCCAATTTTGCGACC+TGG | - | chr4.3:29876111-29876130 | MS.gene031655:intron | 45.0% |
| ! | AGTCCCACAGTGCACATTTT+GGG | + | chr4.3:29876005-29876024 | None:intergenic | 45.0% |
| ! | CGAAAGTATGACCTAGTGAC+TGG | + | chr4.3:29875669-29875688 | None:intergenic | 45.0% |
| ! | CGAGCTTTTGGCAAAAAGTG+AGG | - | chr4.3:29876080-29876099 | MS.gene031655:intron | 45.0% |
| ! | CTAACCTGAAGCATTCCAAG+GGG | + | chr4.3:29876241-29876260 | None:intergenic | 45.0% |
| ! | GATACACTTTGGGAATTGGG+TGG | + | chr4.3:29874959-29874978 | None:intergenic | 45.0% |
| ! | GATTTTCCATCATCTGGCGA+CGG | + | chr4.3:29876905-29876924 | None:intergenic | 45.0% |
| ! | TACACTTTGGGAATTGGGTG+GGG | + | chr4.3:29874957-29874976 | None:intergenic | 45.0% |
| !! | CAGGCCAATATTCTGAGACT+TGG | + | chr4.3:29876948-29876967 | None:intergenic | 45.0% |
| !! | GGTGGCATTGATGTGAAAGA+CGG | - | chr4.3:29876132-29876151 | MS.gene031655:intron | 45.0% |
| !! | AAAAAAAAAAAAAAAAAAGA+GGG | + | chr4.3:29875500-29875519 | None:intergenic | 5.0% |
| !! | ATATATATATATATATATAG+GGG | + | chr4.3:29874597-29874616 | None:intergenic | 5.0% |
| !! | ATATATATATATATATATGT+CGG | - | chr4.3:29874601-29874620 | MS.gene031655:intron | 5.0% |
| AAAGCCCCTTGGAATGCTTC+AGG | - | chr4.3:29876234-29876253 | MS.gene031655:intron | 50.0% | |
| AACAGCCCAGGTTTAGTCAG+AGG | + | chr4.3:29874345-29874364 | None:intergenic | 50.0% | |
| AACAGTTGGGCTAATTCCCC+GGG | + | chr4.3:29874288-29874307 | None:intergenic | 50.0% | |
| AAGACCGCACACCACATGAT+AGG | + | chr4.3:29874864-29874883 | None:intergenic | 50.0% | |
| AAGCAGCACCTTCACACTTG+GGG | + | chr4.3:29876209-29876228 | None:intergenic | 50.0% | |
| ACGCCCACAATAATCAGGGA+TGG | + | chr4.3:29876573-29876592 | None:intergenic | 50.0% | |
| ACTGTTTCAGGCCTGCTCAA+GGG | - | chr4.3:29876022-29876041 | MS.gene031655:intron | 50.0% | |
| AGCCCCAAAATGTGCACTGT+GGG | - | chr4.3:29875999-29876018 | MS.gene031655:intron | 50.0% | |
| AGCGTGAAACTGTTAGGGAG+TGG | - | chr4.3:29876492-29876511 | MS.gene031655:CDS | 50.0% | |
| AGTCAAATGCCCTTCTAGGC+TGG | + | chr4.3:29876529-29876548 | None:intergenic | 50.0% | |
| ATCCCTGATTATTGTGGGCG+TGG | - | chr4.3:29876572-29876591 | MS.gene031655:CDS | 50.0% | |
| ATGCCACCAGGTCGCAAAAT+TGG | + | chr4.3:29876120-29876139 | None:intergenic | 50.0% | |
| CAACAGTTGGGCTAATTCCC+CGG | + | chr4.3:29874289-29874308 | None:intergenic | 50.0% | |
| CAACCACGCCCACAATAATC+AGG | + | chr4.3:29876578-29876597 | None:intergenic | 50.0% | |
| CACAACTCTCTGAGCACCAA+TGG | + | chr4.3:29875141-29875160 | None:intergenic | 50.0% | |
| CAGGTGATGAAGGAACATGG+GGG | - | chr4.3:29876614-29876633 | MS.gene031655:CDS | 50.0% | |
| CCAGAGTCAAATGCCCTTCT+AGG | + | chr4.3:29876533-29876552 | None:intergenic | 50.0% | |
| CTAGGAAAGCAGAAGGTGGA+GGG | + | chr4.3:29875981-29876000 | None:intergenic | 50.0% | |
| CTGATTATTGTGGGCGTGGT+TGG | - | chr4.3:29876576-29876595 | MS.gene031655:CDS | 50.0% | |
| GAAGCAGCACCTTCACACTT+GGG | + | chr4.3:29876210-29876229 | None:intergenic | 50.0% | |
| GCAGGTGATGAAGGAACATG+GGG | - | chr4.3:29876613-29876632 | MS.gene031655:CDS | 50.0% | |
| TAGCCCCAAAATGTGCACTG+TGG | - | chr4.3:29875998-29876017 | MS.gene031655:intron | 50.0% | |
| TAGGGGTTATACGGATGGCT+TGG | + | chr4.3:29874580-29874599 | None:intergenic | 50.0% | |
| TCAGTTGCTTCGAGAGTGGA+AGG | - | chr4.3:29874093-29874112 | MS.gene031655:CDS | 50.0% | |
| TGAAGCAGCACCTTCACACT+TGG | + | chr4.3:29876211-29876230 | None:intergenic | 50.0% | |
| TGCATCAGTTGCTTCGAGAG+TGG | - | chr4.3:29874089-29874108 | MS.gene031655:CDS | 50.0% | |
| TTACTTCTGCGTTGTACCCG+AGG | + | chr4.3:29875834-29875853 | None:intergenic | 50.0% | |
| TTGGGAATTGGGTGGGGTTA+TGG | + | chr4.3:29874951-29874970 | None:intergenic | 50.0% | |
| ! | ACTCCAATTTTGCGACCTGG+TGG | - | chr4.3:29876114-29876133 | MS.gene031655:intron | 50.0% |
| ! | AGCTGATGGATGGCTAGCTA+TGG | + | chr4.3:29875405-29875424 | None:intergenic | 50.0% |
| ! | CAGTCCCACAGTGCACATTT+TGG | + | chr4.3:29876006-29876025 | None:intergenic | 50.0% |
| ! | CTGATGGATGGCTAGCTATG+GGG | + | chr4.3:29875403-29875422 | None:intergenic | 50.0% |
| ! | GCTGATGGATGGCTAGCTAT+GGG | + | chr4.3:29875404-29875423 | None:intergenic | 50.0% |
| ! | GTCCCACAGTGCACATTTTG+GGG | + | chr4.3:29876004-29876023 | None:intergenic | 50.0% |
| ! | TTTGGGGCTAGGAAAGCAGA+AGG | + | chr4.3:29875988-29876007 | None:intergenic | 50.0% |
| !! | CCTAGAAGGGCATTTGACTC+TGG | - | chr4.3:29876530-29876549 | MS.gene031655:CDS | 50.0% |
| !! | GGGCATTTGACTCTGGAACT+AGG | - | chr4.3:29876537-29876556 | MS.gene031655:CDS | 50.0% |
| !!! | ACAGTGCACATTTTGGGGCT+AGG | + | chr4.3:29875999-29876018 | None:intergenic | 50.0% |
| ATTTGTCGGGACCACAGCCT+CGG | - | chr4.3:29875814-29875833 | MS.gene031655:intron | 55.0% | |
| CACTGCTCTAACCCTTGAGC+AGG | + | chr4.3:29876036-29876055 | None:intergenic | 55.0% | |
| CTGCTTCAACGAAAGCCCCT+TGG | - | chr4.3:29876223-29876242 | MS.gene031655:intron | 55.0% | |
| GAAGGTGGAGGGCGGATATT+TGG | + | chr4.3:29875970-29875989 | None:intergenic | 55.0% | |
| GACTGTTTCAGGCCTGCTCA+AGG | - | chr4.3:29876021-29876040 | MS.gene031655:intron | 55.0% | |
| GCTAGGAAAGCAGAAGGTGG+AGG | + | chr4.3:29875982-29876001 | None:intergenic | 55.0% | |
| GGCGTGGTTGGCATGAATCA+AGG | - | chr4.3:29876588-29876607 | MS.gene031655:CDS | 55.0% | |
| GTGCACTGTGGGACTGTTTC+AGG | - | chr4.3:29876010-29876029 | MS.gene031655:intron | 55.0% | |
| TAGCTCAGGCATGGCTCAGT+TGG | - | chr4.3:29875726-29875745 | MS.gene031655:intron | 55.0% | |
| TCAAGGGTTAGAGCAGTGCC+AGG | - | chr4.3:29876038-29876057 | MS.gene031655:intron | 55.0% | |
| ! | GGGTTATACGGATGGCTTGG+TGG | + | chr4.3:29874577-29874596 | None:intergenic | 55.0% |
| !! | ATACGGATGGCTTGGTGGCT+GGG | + | chr4.3:29874572-29874591 | None:intergenic | 55.0% |
| !! | TATACGGATGGCTTGGTGGC+TGG | + | chr4.3:29874573-29874592 | None:intergenic | 55.0% |
| ATTCCCCGGGAAACGACCCA+AGG | + | chr4.3:29874275-29874294 | None:intergenic | 60.0% | |
| GGAAAGCAGAAGGTGGAGGG+CGG | + | chr4.3:29875978-29875997 | None:intergenic | 60.0% | |
| GGGGCTAGGAAAGCAGAAGG+TGG | + | chr4.3:29875985-29876004 | None:intergenic | 60.0% | |
| GTGGGCATCCCCAAGTGTGA+AGG | - | chr4.3:29876198-29876217 | MS.gene031655:intron | 60.0% | |
| TTTGTCGGGACCACAGCCTC+GGG | - | chr4.3:29875815-29875834 | MS.gene031655:intron | 60.0% | |
| !! | TACGGATGGCTTGGTGGCTG+GGG | + | chr4.3:29874571-29874590 | None:intergenic | 60.0% |
| CTGCGTTGTACCCGAGGCTG+TGG | + | chr4.3:29875828-29875847 | None:intergenic | 65.0% | |
| GAGCCTTGGGTCGTTTCCCG+GGG | - | chr4.3:29874269-29874288 | MS.gene031655:CDS | 65.0% | |
| GCTGCTCCGTCGCCAGATGA+TGG | - | chr4.3:29876896-29876915 | MS.gene031655:CDS | 65.0% | |
| GGAGCCTTGGGTCGTTTCCC+GGG | - | chr4.3:29874268-29874287 | MS.gene031655:CDS | 65.0% | |
| GGGAGCCTTGGGTCGTTTCC+CGG | - | chr4.3:29874267-29874286 | MS.gene031655:CDS | 65.0% | |
| GGGGTGGGGGAGTTAAGGAG+TGG | + | chr4.3:29874552-29874571 | None:intergenic | 65.0% | |
| TGGCTGGGGTGGGGGAGTTA+AGG | + | chr4.3:29874557-29874576 | None:intergenic | 65.0% | |
| !! | ATGGCTTGGTGGCTGGGGTG+GGG | + | chr4.3:29874566-29874585 | None:intergenic | 65.0% |
| !! | GATGGCTTGGTGGCTGGGGT+GGG | + | chr4.3:29874567-29874586 | None:intergenic | 65.0% |
| !! | GGATGGCTTGGTGGCTGGGG+TGG | + | chr4.3:29874568-29874587 | None:intergenic | 70.0% |
| !! | TGGCTTGGTGGCTGGGGTGG+GGG | + | chr4.3:29874565-29874584 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 29873923 | 29876979 | 29873923 | ID=MS.gene031655 |
| chr4.3 | mRNA | 29873923 | 29876979 | 29873923 | ID=MS.gene031655.t1;Parent=MS.gene031655 |
| chr4.3 | exon | 29876755 | 29876979 | 29876755 | ID=MS.gene031655.t1.exon1;Parent=MS.gene031655.t1 |
| chr4.3 | CDS | 29876755 | 29876979 | 29876755 | ID=cds.MS.gene031655.t1;Parent=MS.gene031655.t1 |
| chr4.3 | exon | 29876480 | 29876638 | 29876480 | ID=MS.gene031655.t1.exon2;Parent=MS.gene031655.t1 |
| chr4.3 | CDS | 29876480 | 29876638 | 29876480 | ID=cds.MS.gene031655.t1;Parent=MS.gene031655.t1 |
| chr4.3 | exon | 29874647 | 29875253 | 29874647 | ID=MS.gene031655.t1.exon3;Parent=MS.gene031655.t1 |
| chr4.3 | CDS | 29874647 | 29875253 | 29874647 | ID=cds.MS.gene031655.t1;Parent=MS.gene031655.t1 |
| chr4.3 | exon | 29873923 | 29874434 | 29873923 | ID=MS.gene031655.t1.exon4;Parent=MS.gene031655.t1 |
| chr4.3 | CDS | 29873923 | 29874434 | 29873923 | ID=cds.MS.gene031655.t1;Parent=MS.gene031655.t1 |
| Gene Sequence |
| Protein sequence |
