Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031756.t1 | XP_003607414.2 | 94.3 | 559 | 28 | 2 | 1 | 559 | 1 | 555 | 6.10E-269 | 936.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031756.t1 | A0A024B7I0 | 56.7 | 608 | 194 | 17 | 1 | 559 | 1 | 588 | 8.6e-147 | 521.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031756.t1 | G7JSQ4 | 94.3 | 559 | 28 | 2 | 1 | 559 | 1 | 555 | 4.4e-269 | 936.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene031756.t1 | TF | GRAS |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031756.t1 | MTR_4g077760 | 96.780 | 559 | 14 | 2 | 1 | 559 | 1 | 555 | 0.0 | 1102 |
MS.gene031756.t1 | MTR_2g082090 | 37.892 | 351 | 193 | 11 | 223 | 558 | 238 | 578 | 2.79e-53 | 191 |
MS.gene031756.t1 | MTR_3g056110 | 35.593 | 354 | 211 | 10 | 217 | 559 | 195 | 542 | 6.34e-53 | 189 |
MS.gene031756.t1 | MTR_5g094450 | 34.026 | 385 | 233 | 9 | 190 | 559 | 154 | 532 | 1.36e-52 | 187 |
MS.gene031756.t1 | MTR_3g065980 | 34.884 | 387 | 216 | 12 | 194 | 559 | 169 | 540 | 5.84e-52 | 186 |
MS.gene031756.t1 | MTR_7g074650 | 34.060 | 367 | 220 | 10 | 200 | 559 | 441 | 792 | 1.07e-51 | 189 |
MS.gene031756.t1 | MTR_7g027190 | 31.529 | 425 | 235 | 11 | 160 | 559 | 280 | 673 | 1.43e-51 | 187 |
MS.gene031756.t1 | MTR_3g089055 | 31.383 | 376 | 235 | 8 | 198 | 559 | 199 | 565 | 5.24e-50 | 181 |
MS.gene031756.t1 | MTR_3g089055 | 31.383 | 376 | 235 | 8 | 198 | 559 | 204 | 570 | 5.57e-50 | 181 |
MS.gene031756.t1 | MTR_5g097480 | 33.684 | 380 | 237 | 9 | 190 | 559 | 170 | 544 | 3.07e-49 | 179 |
MS.gene031756.t1 | MTR_1g069725 | 33.871 | 372 | 224 | 10 | 194 | 558 | 106 | 462 | 3.71e-49 | 177 |
MS.gene031756.t1 | MTR_1g029420 | 31.183 | 372 | 241 | 7 | 198 | 559 | 226 | 592 | 4.13e-49 | 179 |
MS.gene031756.t1 | MTR_4g076020 | 31.944 | 360 | 203 | 12 | 211 | 559 | 101 | 429 | 7.71e-44 | 162 |
MS.gene031756.t1 | MTR_4g102790 | 30.287 | 383 | 239 | 12 | 194 | 558 | 289 | 661 | 8.93e-44 | 166 |
MS.gene031756.t1 | MTR_4g104020 | 27.792 | 385 | 249 | 7 | 194 | 559 | 146 | 520 | 3.95e-43 | 161 |
MS.gene031756.t1 | MTR_4g133660 | 32.286 | 350 | 220 | 9 | 220 | 558 | 199 | 542 | 4.05e-43 | 162 |
MS.gene031756.t1 | MTR_1g096030 | 31.392 | 395 | 232 | 11 | 193 | 559 | 76 | 459 | 2.55e-42 | 158 |
MS.gene031756.t1 | MTR_2g026250 | 30.571 | 350 | 228 | 8 | 220 | 559 | 252 | 596 | 5.26e-40 | 154 |
MS.gene031756.t1 | MTR_4g097080 | 28.974 | 390 | 251 | 10 | 185 | 559 | 125 | 503 | 7.98e-40 | 152 |
MS.gene031756.t1 | MTR_5g058860 | 31.232 | 349 | 223 | 6 | 225 | 558 | 150 | 496 | 1.74e-38 | 148 |
MS.gene031756.t1 | MTR_3g072710 | 29.216 | 421 | 249 | 9 | 184 | 558 | 82 | 499 | 2.07e-38 | 148 |
MS.gene031756.t1 | MTR_3g022830 | 28.009 | 432 | 239 | 13 | 188 | 559 | 17 | 436 | 5.26e-38 | 145 |
MS.gene031756.t1 | MTR_4g064200 | 27.937 | 383 | 254 | 9 | 189 | 558 | 276 | 649 | 2.06e-37 | 147 |
MS.gene031756.t1 | MTR_2g097310 | 28.684 | 380 | 244 | 10 | 195 | 558 | 269 | 637 | 2.18e-37 | 147 |
MS.gene031756.t1 | MTR_2g097410 | 26.772 | 381 | 254 | 10 | 195 | 558 | 368 | 740 | 1.62e-36 | 145 |
MS.gene031756.t1 | MTR_4g064160 | 29.024 | 379 | 247 | 9 | 194 | 558 | 313 | 683 | 2.20e-36 | 144 |
MS.gene031756.t1 | MTR_2g097350 | 28.421 | 380 | 245 | 10 | 195 | 558 | 271 | 639 | 8.17e-36 | 142 |
MS.gene031756.t1 | MTR_4g064150 | 27.473 | 364 | 238 | 9 | 213 | 558 | 377 | 732 | 9.16e-36 | 142 |
MS.gene031756.t1 | MTR_8g442410 | 28.571 | 385 | 245 | 10 | 194 | 559 | 152 | 525 | 9.88e-36 | 140 |
MS.gene031756.t1 | MTR_2g097390 | 28.684 | 380 | 244 | 10 | 195 | 558 | 272 | 640 | 1.55e-35 | 141 |
MS.gene031756.t1 | MTR_5g015490 | 29.771 | 393 | 240 | 13 | 190 | 559 | 111 | 490 | 1.98e-35 | 139 |
MS.gene031756.t1 | MTR_5g009080 | 25.688 | 436 | 244 | 9 | 194 | 559 | 53 | 478 | 2.16e-35 | 139 |
MS.gene031756.t1 | MTR_2g097467 | 25.729 | 377 | 259 | 7 | 194 | 558 | 286 | 653 | 6.52e-35 | 139 |
MS.gene031756.t1 | MTR_2g097463 | 25.381 | 394 | 271 | 8 | 178 | 558 | 271 | 654 | 1.25e-34 | 139 |
MS.gene031756.t1 | MTR_8g093070 | 32.394 | 355 | 212 | 14 | 214 | 558 | 159 | 495 | 2.08e-34 | 136 |
MS.gene031756.t1 | MTR_4g064120 | 25.693 | 397 | 277 | 8 | 166 | 548 | 223 | 615 | 2.99e-34 | 137 |
MS.gene031756.t1 | MTR_4g076140 | 26.545 | 437 | 238 | 12 | 194 | 559 | 45 | 469 | 4.33e-34 | 135 |
MS.gene031756.t1 | MTR_2g034250 | 26.804 | 388 | 253 | 11 | 194 | 559 | 207 | 585 | 4.93e-34 | 136 |
MS.gene031756.t1 | MTR_4g064180 | 27.714 | 350 | 235 | 8 | 213 | 548 | 270 | 615 | 1.32e-33 | 135 |
MS.gene031756.t1 | MTR_2g034260 | 26.302 | 384 | 259 | 10 | 194 | 559 | 207 | 584 | 1.52e-33 | 135 |
MS.gene031756.t1 | MTR_2g034280 | 26.316 | 380 | 262 | 8 | 194 | 559 | 200 | 575 | 2.20e-33 | 134 |
MS.gene031756.t1 | MTR_2g097473 | 25.729 | 377 | 259 | 7 | 194 | 558 | 286 | 653 | 2.52e-33 | 135 |
MS.gene031756.t1 | MTR_4g026485 | 29.639 | 415 | 240 | 16 | 167 | 559 | 240 | 624 | 6.23e-33 | 133 |
MS.gene031756.t1 | MTR_7g062120 | 26.836 | 354 | 241 | 8 | 220 | 559 | 391 | 740 | 1.37e-32 | 133 |
MS.gene031756.t1 | MTR_7g109580 | 28.804 | 368 | 245 | 10 | 202 | 559 | 194 | 554 | 7.75e-32 | 129 |
MS.gene031756.t1 | MTR_0092s0100 | 30.667 | 375 | 236 | 12 | 194 | 559 | 369 | 728 | 6.78e-31 | 128 |
MS.gene031756.t1 | MTR_0092s0100 | 30.667 | 375 | 236 | 12 | 194 | 559 | 372 | 731 | 7.69e-31 | 128 |
MS.gene031756.t1 | MTR_2g097380 | 26.703 | 367 | 218 | 10 | 205 | 558 | 232 | 560 | 1.01e-30 | 126 |
MS.gene031756.t1 | MTR_2g099110 | 27.735 | 393 | 241 | 11 | 196 | 559 | 73 | 451 | 1.24e-28 | 119 |
MS.gene031756.t1 | MTR_2g089100 | 26.316 | 399 | 251 | 13 | 196 | 558 | 51 | 442 | 6.01e-26 | 111 |
MS.gene031756.t1 | MTR_7g057230 | 29.017 | 417 | 256 | 16 | 162 | 558 | 260 | 656 | 3.90e-23 | 103 |
MS.gene031756.t1 | MTR_5g015950 | 24.429 | 438 | 263 | 13 | 184 | 558 | 13 | 445 | 4.81e-23 | 102 |
MS.gene031756.t1 | MTR_3g053270 | 24.429 | 438 | 263 | 13 | 184 | 558 | 13 | 445 | 4.81e-23 | 102 |
MS.gene031756.t1 | MTR_4g095500 | 23.673 | 452 | 276 | 14 | 161 | 558 | 31 | 467 | 8.78e-20 | 92.8 |
MS.gene031756.t1 | MTR_1g086970 | 21.978 | 364 | 246 | 12 | 219 | 559 | 130 | 478 | 5.36e-19 | 90.5 |
MS.gene031756.t1 | MTR_8g020840 | 25.260 | 384 | 258 | 10 | 198 | 559 | 172 | 548 | 8.57e-19 | 90.1 |
MS.gene031756.t1 | MTR_8g077940 | 24.936 | 389 | 243 | 14 | 194 | 559 | 179 | 541 | 8.27e-16 | 80.9 |
MS.gene031756.t1 | MTR_7g069740 | 23.823 | 361 | 235 | 13 | 222 | 559 | 241 | 584 | 5.03e-11 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031756.t1 | AT5G66770 | 54.010 | 611 | 202 | 13 | 1 | 559 | 1 | 584 | 0.0 | 535 |
MS.gene031756.t1 | AT3G50650 | 49.744 | 587 | 222 | 14 | 1 | 559 | 1 | 542 | 3.01e-161 | 471 |
MS.gene031756.t1 | AT5G41920 | 32.843 | 408 | 233 | 12 | 170 | 559 | 16 | 400 | 9.26e-55 | 190 |
MS.gene031756.t1 | AT5G48150 | 33.596 | 381 | 237 | 7 | 190 | 559 | 115 | 490 | 5.24e-53 | 188 |
MS.gene031756.t1 | AT5G48150 | 33.596 | 381 | 237 | 7 | 190 | 559 | 115 | 490 | 5.24e-53 | 188 |
MS.gene031756.t1 | AT5G48150 | 33.596 | 381 | 237 | 7 | 190 | 559 | 115 | 490 | 5.24e-53 | 188 |
MS.gene031756.t1 | AT5G48150 | 33.596 | 381 | 237 | 7 | 190 | 559 | 115 | 490 | 5.24e-53 | 188 |
MS.gene031756.t1 | AT1G50600 | 34.211 | 380 | 235 | 8 | 190 | 559 | 152 | 526 | 5.69e-53 | 189 |
MS.gene031756.t1 | AT1G50600 | 34.211 | 380 | 235 | 8 | 190 | 559 | 223 | 597 | 2.67e-52 | 188 |
MS.gene031756.t1 | AT3G03450 | 31.410 | 468 | 279 | 18 | 119 | 559 | 93 | 545 | 3.01e-52 | 187 |
MS.gene031756.t1 | AT1G50600 | 34.211 | 380 | 235 | 8 | 190 | 559 | 227 | 601 | 3.48e-52 | 188 |
MS.gene031756.t1 | AT3G54220 | 33.784 | 370 | 218 | 11 | 200 | 558 | 296 | 649 | 7.86e-52 | 188 |
MS.gene031756.t1 | AT2G04890 | 34.085 | 355 | 210 | 12 | 216 | 559 | 72 | 413 | 5.56e-49 | 175 |
MS.gene031756.t1 | AT5G17490 | 32.061 | 393 | 244 | 12 | 177 | 559 | 137 | 516 | 1.73e-45 | 168 |
MS.gene031756.t1 | AT1G66350 | 29.149 | 470 | 276 | 16 | 112 | 559 | 72 | 506 | 6.18e-45 | 166 |
MS.gene031756.t1 | AT1G21450 | 28.250 | 400 | 272 | 8 | 170 | 559 | 199 | 593 | 8.16e-45 | 167 |
MS.gene031756.t1 | AT1G63100 | 31.776 | 321 | 184 | 8 | 260 | 558 | 321 | 628 | 7.23e-43 | 162 |
MS.gene031756.t1 | AT1G63100 | 31.776 | 321 | 184 | 8 | 260 | 558 | 346 | 653 | 7.71e-43 | 162 |
MS.gene031756.t1 | AT4G17230 | 31.649 | 376 | 242 | 8 | 194 | 559 | 155 | 525 | 5.38e-42 | 158 |
MS.gene031756.t1 | AT4G17230 | 31.649 | 376 | 242 | 8 | 194 | 559 | 155 | 525 | 5.38e-42 | 158 |
MS.gene031756.t1 | AT2G01570 | 33.141 | 347 | 206 | 14 | 223 | 559 | 251 | 581 | 1.46e-41 | 158 |
MS.gene031756.t1 | AT1G55580 | 31.579 | 380 | 205 | 9 | 227 | 559 | 74 | 445 | 4.43e-41 | 154 |
MS.gene031756.t1 | AT1G14920 | 31.232 | 349 | 210 | 12 | 223 | 559 | 199 | 529 | 3.22e-40 | 154 |
MS.gene031756.t1 | AT3G46600 | 27.763 | 371 | 255 | 7 | 198 | 559 | 5 | 371 | 9.26e-40 | 149 |
MS.gene031756.t1 | AT3G46600 | 27.763 | 371 | 255 | 7 | 198 | 559 | 213 | 579 | 6.28e-39 | 150 |
MS.gene031756.t1 | AT3G46600 | 27.763 | 371 | 255 | 7 | 198 | 559 | 181 | 547 | 9.66e-39 | 149 |
MS.gene031756.t1 | AT4G08250 | 29.429 | 350 | 237 | 5 | 217 | 558 | 129 | 476 | 1.33e-38 | 148 |
MS.gene031756.t1 | AT5G59450 | 26.551 | 403 | 278 | 8 | 171 | 559 | 200 | 598 | 6.29e-38 | 148 |
MS.gene031756.t1 | AT1G07520 | 28.382 | 377 | 251 | 7 | 198 | 558 | 319 | 692 | 8.26e-38 | 148 |
MS.gene031756.t1 | AT1G07520 | 28.382 | 377 | 251 | 7 | 198 | 558 | 320 | 693 | 9.66e-38 | 148 |
MS.gene031756.t1 | AT4G37650 | 29.101 | 378 | 238 | 11 | 206 | 559 | 158 | 529 | 9.81e-38 | 146 |
MS.gene031756.t1 | AT1G07520 | 28.382 | 377 | 251 | 7 | 198 | 558 | 155 | 528 | 1.03e-37 | 146 |
MS.gene031756.t1 | AT1G07520 | 28.382 | 377 | 251 | 7 | 198 | 558 | 155 | 528 | 1.03e-37 | 146 |
MS.gene031756.t1 | AT1G07530 | 26.633 | 398 | 270 | 9 | 175 | 558 | 375 | 764 | 2.90e-36 | 144 |
MS.gene031756.t1 | AT2G29065 | 27.763 | 389 | 239 | 10 | 198 | 558 | 253 | 627 | 7.87e-36 | 142 |
MS.gene031756.t1 | AT2G29060 | 24.524 | 420 | 300 | 9 | 152 | 558 | 276 | 691 | 2.53e-35 | 141 |
MS.gene031756.t1 | AT2G29060 | 24.524 | 420 | 300 | 9 | 152 | 558 | 239 | 654 | 2.93e-35 | 140 |
MS.gene031756.t1 | AT2G37650 | 25.217 | 345 | 236 | 7 | 228 | 559 | 378 | 713 | 6.16e-28 | 119 |
MS.gene031756.t1 | AT2G37650 | 25.217 | 345 | 236 | 7 | 228 | 559 | 366 | 701 | 6.62e-28 | 119 |
MS.gene031756.t1 | AT5G52510 | 26.615 | 387 | 248 | 12 | 196 | 559 | 267 | 640 | 2.03e-26 | 114 |
MS.gene031756.t1 | AT4G00150 | 28.302 | 371 | 219 | 14 | 209 | 559 | 211 | 554 | 7.57e-26 | 112 |
MS.gene031756.t1 | AT2G45160 | 28.070 | 399 | 227 | 16 | 194 | 559 | 268 | 639 | 1.51e-23 | 105 |
MS.gene031756.t1 | AT3G60630 | 29.412 | 306 | 190 | 9 | 268 | 559 | 329 | 622 | 1.87e-23 | 105 |
MS.gene031756.t1 | AT1G50420 | 31.250 | 224 | 137 | 5 | 211 | 428 | 74 | 286 | 2.75e-23 | 103 |
MS.gene031756.t1 | AT1G50420 | 32.414 | 145 | 90 | 3 | 420 | 559 | 338 | 479 | 6.85e-15 | 77.8 |
MS.gene031756.t1 | AT3G49950 | 27.171 | 357 | 226 | 12 | 227 | 558 | 60 | 407 | 1.23e-22 | 100 |
MS.gene031756.t1 | AT3G13840 | 25.722 | 381 | 249 | 9 | 196 | 559 | 147 | 510 | 1.03e-20 | 95.9 |
MS.gene031756.t1 | AT4G36710 | 23.947 | 380 | 259 | 12 | 194 | 559 | 122 | 485 | 4.81e-17 | 84.3 |
Find 125 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTAATAGTGTAAGAATTTC+TGG | 0.119456 | 4.3:+31156290 | MS.gene031756:CDS |
GATATTCATATAGTTGATTT+TGG | 0.147557 | 4.3:+31156203 | MS.gene031756:CDS |
CTCTATTGACTGTTTCTTCT+TGG | 0.170351 | 4.3:+31156960 | MS.gene031756:CDS |
CCAGAAATTCTTACACTATT+AGG | 0.205458 | 4.3:-31156290 | None:intergenic |
ATATGGGCATGCATCGTTTA+AGG | 0.214693 | 4.3:-31156120 | None:intergenic |
GCTTCAGTTGTATAATCTTT+TGG | 0.233520 | 4.3:+31156499 | MS.gene031756:CDS |
TAAAAGGAAACTCTTTGATT+AGG | 0.234171 | 4.3:-31155996 | None:intergenic |
GGTATACCTGCTATGGCTTT+AGG | 0.252034 | 4.3:+31156311 | MS.gene031756:CDS |
AAATGTGCGAACTTTGAATA+TGG | 0.257358 | 4.3:-31156137 | None:intergenic |
TGGGTGGTTGGATTGGGATT+TGG | 0.269914 | 4.3:-31155797 | None:intergenic |
AAAAGGAAACTCTTTGATTA+GGG | 0.285344 | 4.3:-31155995 | None:intergenic |
AATCCTAAGATTGTTACTTT+AGG | 0.287104 | 4.3:+31156572 | MS.gene031756:CDS |
TCACCTAAAGTAACAATCTT+AGG | 0.289550 | 4.3:-31156575 | None:intergenic |
TGCGGAGTGGGTGGTTGGAT+TGG | 0.299788 | 4.3:-31155804 | None:intergenic |
AGGGTTTCAATTGCTTGATT+TGG | 0.313945 | 4.3:-31155936 | None:intergenic |
TAAGGCTTGTGAAAAGTAAA+AGG | 0.314801 | 4.3:-31156012 | None:intergenic |
TTCGATGAGTGAAGCAATTT+CGG | 0.323142 | 4.3:-31155904 | None:intergenic |
CAAATTCTTCTTCAACTACT+TGG | 0.323189 | 4.3:+31156072 | MS.gene031756:CDS |
CAATTGCTTGATTTGGTTTG+TGG | 0.338888 | 4.3:-31155929 | None:intergenic |
CTTGTTGAGCTATTGCCATT+AGG | 0.345192 | 4.3:-31155338 | None:intergenic |
GCGGAGTGGGTGGTTGGATT+GGG | 0.350584 | 4.3:-31155803 | None:intergenic |
TTGATTTGCTGAGATGGGTT+AGG | 0.352847 | 4.3:-31155956 | None:intergenic |
TTGTGATACCTAGGATGTTT+TGG | 0.353661 | 4.3:-31155431 | None:intergenic |
GCATTTGCAACTCGTTCTTC+TGG | 0.357528 | 4.3:+31156263 | MS.gene031756:CDS |
TTAACAGCTAAAGCCTCATT+TGG | 0.363944 | 4.3:-31156470 | None:intergenic |
TTGAAATGGGTCGGTGAAAT+CGG | 0.367983 | 4.3:-31155550 | None:intergenic |
GGACCCGACCCGACTTGAAA+TGG | 0.372343 | 4.3:-31155564 | None:intergenic |
AATTGCTTGATTTGGTTTGT+GGG | 0.376792 | 4.3:-31155928 | None:intergenic |
CCAGTCATCGGAGTCGAAAT+CGG | 0.397137 | 4.3:-31155655 | None:intergenic |
CCGATTTCGACTCCGATGAC+TGG | 0.399290 | 4.3:+31155655 | MS.gene031756:CDS |
TGATTTGCTGAGATGGGTTA+GGG | 0.400674 | 4.3:-31155955 | None:intergenic |
ATTTGGAGTGGCACGGTGGC+GGG | 0.405277 | 4.3:-31155780 | None:intergenic |
TGAAAACGACGATGTCGTTT+CGG | 0.406416 | 4.3:-31155850 | None:intergenic |
TTGCTTGGTAGGAGAATTGA+TGG | 0.408569 | 4.3:+31156737 | MS.gene031756:CDS |
GACCCGACTCTCACCGCAAC+CGG | 0.408658 | 4.3:+31155746 | MS.gene031756:CDS |
TGAGTGAAGCAATTTCGGTT+AGG | 0.410733 | 4.3:-31155899 | None:intergenic |
GAGTGAAGCAATTTCGGTTA+GGG | 0.413751 | 4.3:-31155898 | None:intergenic |
GAATTGTTCAAGGGATTCAA+TGG | 0.414040 | 4.3:+31156225 | MS.gene031756:CDS |
ATCCGGTTGCGGTGAGAGTC+GGG | 0.422803 | 4.3:-31155748 | None:intergenic |
GATTTGGAGTGGCACGGTGG+CGG | 0.424354 | 4.3:-31155781 | None:intergenic |
AGTGATGAAGAAGAAGATAC+TGG | 0.431284 | 4.3:-31155504 | None:intergenic |
GATTCATCAAGAAGCTCAAT+AGG | 0.436690 | 4.3:-31156431 | None:intergenic |
GATGATGATGTTGATGTTGT+TGG | 0.436789 | 4.3:-31155407 | None:intergenic |
GTGAAATTGATTTGCTGAGA+TGG | 0.442057 | 4.3:-31155962 | None:intergenic |
GGCGAATCCAACGCCATGTT+CGG | 0.446437 | 4.3:-31156689 | None:intergenic |
AAACTCAGATAAACGATTAC+CGG | 0.454956 | 4.3:-31156363 | None:intergenic |
TCACCGACCCATTTCAAGTC+GGG | 0.456993 | 4.3:+31155556 | MS.gene031756:CDS |
ATCGGAGTGGTTGTCGGCAG+CGG | 0.470784 | 4.3:-31155694 | None:intergenic |
GTGTGATTGGTGTGAGGGAG+AGG | 0.470960 | 4.3:+31156759 | MS.gene031756:CDS |
GTAGCTGAAATCGATGAAAC+TGG | 0.471542 | 4.3:-31156341 | None:intergenic |
AATTTCTGGTATACCTGCTA+TGG | 0.471549 | 4.3:+31156304 | MS.gene031756:CDS |
GATTGGTGTGAGGGAGAGGA+TGG | 0.472918 | 4.3:+31156763 | MS.gene031756:CDS |
AATGTGCGAACTTTGAATAT+GGG | 0.473696 | 4.3:-31156136 | None:intergenic |
GACCCATTTCAAGTCGGGTC+GGG | 0.475045 | 4.3:+31155561 | MS.gene031756:CDS |
AGCAAATCAATTTCACAAAA+CGG | 0.480108 | 4.3:+31155969 | MS.gene031756:CDS |
CGCTGACAGTGGAAACCTAA+TGG | 0.480605 | 4.3:+31155323 | MS.gene031756:CDS |
ATCAACTATATGAATATCGT+TGG | 0.482770 | 4.3:-31156198 | None:intergenic |
CTCTCCACTTGAAACCTCTC+TGG | 0.491073 | 4.3:-31156710 | None:intergenic |
ATGGAAATCGGAGTGGTTGT+CGG | 0.496680 | 4.3:-31155700 | None:intergenic |
CGGGTCGGGCATGATGAAAA+CGG | 0.497777 | 4.3:-31155729 | None:intergenic |
GTTGTCGGCAGCGGACATTA+AGG | 0.498733 | 4.3:-31155685 | None:intergenic |
CGAAGCTAGTTTGACGACTC+GGG | 0.501254 | 4.3:+31156601 | MS.gene031756:CDS |
TGAAATTGATTTGCTGAGAT+GGG | 0.503445 | 4.3:-31155961 | None:intergenic |
TGCGTTGCGGAGTGGGTGGT+TGG | 0.505785 | 4.3:-31155809 | None:intergenic |
AGGAGAATTGATGGTGTGAT+TGG | 0.505945 | 4.3:+31156746 | MS.gene031756:CDS |
GACCCGACCCGACTTGAAAT+GGG | 0.507947 | 4.3:-31155563 | None:intergenic |
GAGTGAGGGTCGAGTGGTGA+AGG | 0.509192 | 4.3:-31155615 | None:intergenic |
AAACGGGTTGAGATGGAAAT+CGG | 0.511523 | 4.3:-31155712 | None:intergenic |
GGGTCGGGCATGATGAAAAC+GGG | 0.514429 | 4.3:-31155728 | None:intergenic |
TTTGGAGCCGAACATGGCGT+TGG | 0.516288 | 4.3:+31156682 | MS.gene031756:CDS |
GCTAGTTTGACGACTCGGGT+TGG | 0.518034 | 4.3:+31156605 | MS.gene031756:CDS |
AAATTCTTCTTCAACTACTT+GGG | 0.520685 | 4.3:+31156073 | MS.gene031756:CDS |
CGGAGTCGAAATCGGAGAAA+CGG | 0.521347 | 4.3:-31155647 | None:intergenic |
CATCATCACCAAAACATCCT+AGG | 0.524123 | 4.3:+31155423 | MS.gene031756:CDS |
GTTGCGGTGAGAGTCGGGTC+GGG | 0.524249 | 4.3:-31155743 | None:intergenic |
GGTTGGATTGGGATTTGGAG+TGG | 0.534821 | 4.3:-31155792 | None:intergenic |
AATTGTTCAAGGGATTCAAT+GGG | 0.536168 | 4.3:+31156226 | MS.gene031756:CDS |
AGCTCAATAGGCGTAAGAAT+CGG | 0.539095 | 4.3:-31156419 | None:intergenic |
CGATGTCGTTTCGGTGGTGT+TGG | 0.543827 | 4.3:-31155841 | None:intergenic |
GATCCGGTTGCGGTGAGAGT+CGG | 0.545074 | 4.3:-31155749 | None:intergenic |
TTTCGACTCCGATGACTGGA+TGG | 0.549581 | 4.3:+31155659 | MS.gene031756:CDS |
CAAGAAGAAACAGTCAATAG+AGG | 0.549819 | 4.3:-31156959 | None:intergenic |
TGAGAGTTTGGAGCCGAACA+TGG | 0.552448 | 4.3:+31156676 | MS.gene031756:CDS |
GTGGCGGGTAGGAGAAGATC+CGG | 0.554130 | 4.3:-31155765 | None:intergenic |
ACGAAGCTAGTTTGACGACT+CGG | 0.556827 | 4.3:+31156600 | MS.gene031756:CDS |
CGACCCATTTCAAGTCGGGT+CGG | 0.565104 | 4.3:+31155560 | MS.gene031756:CDS |
TAAGGTATCCATCCAGTCAT+CGG | 0.565279 | 4.3:-31155667 | None:intergenic |
GTTTCATCGATTTCAGCTAC+CGG | 0.566724 | 4.3:+31156344 | MS.gene031756:CDS |
GAAGTTCCTAAAGCCATAGC+AGG | 0.567270 | 4.3:-31156317 | None:intergenic |
TCTCTGTCTCACTACATCCA+TGG | 0.569966 | 4.3:+31155460 | MS.gene031756:CDS |
GGAGTGGCACGGTGGCGGGT+AGG | 0.573432 | 4.3:-31155776 | None:intergenic |
AAACGGAAGGTGGTTGAGTG+AGG | 0.573544 | 4.3:-31155630 | None:intergenic |
GGATGGAGGATAAAGAACAG+TGG | 0.578860 | 4.3:+31156780 | MS.gene031756:CDS |
GGTGAAGGAAAGTTGAAAGC+GGG | 0.586484 | 4.3:-31155600 | None:intergenic |
TTCGCCAGAGAGGTTTCAAG+TGG | 0.588796 | 4.3:+31156706 | MS.gene031756:CDS |
AGGAAAGTTGAAAGCGGGAT+CGG | 0.590312 | 4.3:-31155595 | None:intergenic |
AGAGAGGGTTTGTGATACCT+AGG | 0.592419 | 4.3:-31155440 | None:intergenic |
GATTGGGATTTGGAGTGGCA+CGG | 0.594042 | 4.3:-31155787 | None:intergenic |
ATGATGAAAACGGGTTGAGA+TGG | 0.594967 | 4.3:-31155719 | None:intergenic |
GGAGGATAAAGAACAGTGGA+AGG | 0.599058 | 4.3:+31156784 | MS.gene031756:CDS |
TGGTGTGAGGGAGAGGATGG+AGG | 0.600379 | 4.3:+31156766 | MS.gene031756:CDS |
GGATGTAGTGAGACAGAGAG+AGG | 0.601119 | 4.3:-31155456 | None:intergenic |
GGTTGCGGTGAGAGTCGGGT+CGG | 0.604150 | 4.3:-31155744 | None:intergenic |
TTCACCGACCCATTTCAAGT+CGG | 0.604924 | 4.3:+31155555 | MS.gene031756:CDS |
TGATGGTGTGATTGGTGTGA+GGG | 0.605734 | 4.3:+31156754 | MS.gene031756:CDS |
AACGGAAGGTGGTTGAGTGA+GGG | 0.606602 | 4.3:-31155629 | None:intergenic |
GTGGTTGAGTGAGGGTCGAG+TGG | 0.609203 | 4.3:-31155621 | None:intergenic |
GTCAAGCTAAGATATTGTTG+TGG | 0.613839 | 4.3:+31156861 | MS.gene031756:CDS |
AATGGGTCGGTGAAATCGGT+AGG | 0.625917 | 4.3:-31155546 | None:intergenic |
GCGATTCTTGAAGCAACAGA+AGG | 0.626009 | 4.3:+31156173 | MS.gene031756:CDS |
GATGTAGTGAGACAGAGAGA+GGG | 0.639502 | 4.3:-31155455 | None:intergenic |
GGGTCGGTGAAATCGGTAGG+TGG | 0.649301 | 4.3:-31155543 | None:intergenic |
GTCGAAATCGGAGAAACGGA+AGG | 0.650056 | 4.3:-31155643 | None:intergenic |
GCTTACATGTGCGCTGACAG+TGG | 0.651171 | 4.3:+31155312 | MS.gene031756:CDS |
GAAATCGGAGAAACGGAAGG+TGG | 0.658200 | 4.3:-31155640 | None:intergenic |
GGTAGGAGAAGATCCGGTTG+CGG | 0.659311 | 4.3:-31155759 | None:intergenic |
TTGATGGTGTGATTGGTGTG+AGG | 0.659575 | 4.3:+31156753 | MS.gene031756:CDS |
CGACCCGACTTGAAATGGGT+CGG | 0.673110 | 4.3:-31155559 | None:intergenic |
TCGGTAGGTGGAAAAGACAA+AGG | 0.681946 | 4.3:-31155531 | None:intergenic |
TGGGATTTGGAGTGGCACGG+TGG | 0.682217 | 4.3:-31155784 | None:intergenic |
TGGTGAAGGAAAGTTGAAAG+CGG | 0.682780 | 4.3:-31155601 | None:intergenic |
TGGCGTTGGATTCGCCAGAG+AGG | 0.687403 | 4.3:+31156696 | MS.gene031756:CDS |
AAACGACGATGTCGTTTCGG+TGG | 0.687537 | 4.3:-31155847 | None:intergenic |
GTAGGTGGAAAAGACAAAGG+TGG | 0.720227 | 4.3:-31155528 | None:intergenic |
GGTTGAGATGGAAATCGGAG+TGG | 0.720412 | 4.3:-31155707 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | GATATTCATATAGTTGATTT+TGG | + | chr4.3:31156203-31156222 | MS.gene031756:CDS | 20.0% |
! | AAAAGGAAACTCTTTGATTA+GGG | - | chr4.3:31155998-31156017 | None:intergenic | 25.0% |
! | AAATTCTTCTTCAACTACTT+GGG | + | chr4.3:31156073-31156092 | MS.gene031756:CDS | 25.0% |
! | AGCAAATCAATTTCACAAAA+CGG | + | chr4.3:31155969-31155988 | MS.gene031756:CDS | 25.0% |
! | ATCAACTATATGAATATCGT+TGG | - | chr4.3:31156201-31156220 | None:intergenic | 25.0% |
! | TAAAAGGAAACTCTTTGATT+AGG | - | chr4.3:31155999-31156018 | None:intergenic | 25.0% |
!!! | AATCCTAAGATTGTTACTTT+AGG | + | chr4.3:31156572-31156591 | MS.gene031756:CDS | 25.0% |
!!! | TTGATTTTGGAATTGTTCAA+GGG | + | chr4.3:31156216-31156235 | MS.gene031756:CDS | 25.0% |
AAACTCAGATAAACGATTAC+CGG | - | chr4.3:31156366-31156385 | None:intergenic | 30.0% | |
AAATGTGCGAACTTTGAATA+TGG | - | chr4.3:31156140-31156159 | None:intergenic | 30.0% | |
AATGTGCGAACTTTGAATAT+GGG | - | chr4.3:31156139-31156158 | None:intergenic | 30.0% | |
AATTGTTCAAGGGATTCAAT+GGG | + | chr4.3:31156226-31156245 | MS.gene031756:CDS | 30.0% | |
CAAATTCTTCTTCAACTACT+TGG | + | chr4.3:31156072-31156091 | MS.gene031756:CDS | 30.0% | |
CCAGAAATTCTTACACTATT+AGG | - | chr4.3:31156293-31156312 | None:intergenic | 30.0% | |
CCTAATAGTGTAAGAATTTC+TGG | + | chr4.3:31156290-31156309 | MS.gene031756:CDS | 30.0% | |
TAAGGCTTGTGAAAAGTAAA+AGG | - | chr4.3:31156015-31156034 | None:intergenic | 30.0% | |
TCACCTAAAGTAACAATCTT+AGG | - | chr4.3:31156578-31156597 | None:intergenic | 30.0% | |
! | CTTTTGTATTCAACCAAATG+AGG | + | chr4.3:31156457-31156476 | MS.gene031756:CDS | 30.0% |
! | GCTTCAGTTGTATAATCTTT+TGG | + | chr4.3:31156499-31156518 | MS.gene031756:CDS | 30.0% |
!! | AATTGCTTGATTTGGTTTGT+GGG | - | chr4.3:31155931-31155950 | None:intergenic | 30.0% |
!! | TGAAATTGATTTGCTGAGAT+GGG | - | chr4.3:31155964-31155983 | None:intergenic | 30.0% |
!!! | GTTGATTTTGGAATTGTTCA+AGG | + | chr4.3:31156215-31156234 | MS.gene031756:CDS | 30.0% |
!!! | GTTGTTCTTGTTGTTGTTTT+TGG | - | chr4.3:31155371-31155390 | None:intergenic | 30.0% |
AGGGTTTCAATTGCTTGATT+TGG | - | chr4.3:31155939-31155958 | None:intergenic | 35.0% | |
AGTGATGAAGAAGAAGATAC+TGG | - | chr4.3:31155507-31155526 | None:intergenic | 35.0% | |
CAAGAAGAAACAGTCAATAG+AGG | - | chr4.3:31156962-31156981 | None:intergenic | 35.0% | |
GAATTGTTCAAGGGATTCAA+TGG | + | chr4.3:31156225-31156244 | MS.gene031756:CDS | 35.0% | |
GATTCATCAAGAAGCTCAAT+AGG | - | chr4.3:31156434-31156453 | None:intergenic | 35.0% | |
GTCAAGCTAAGATATTGTTG+TGG | + | chr4.3:31156861-31156880 | MS.gene031756:CDS | 35.0% | |
TTAACAGCTAAAGCCTCATT+TGG | - | chr4.3:31156473-31156492 | None:intergenic | 35.0% | |
TTCGATGAGTGAAGCAATTT+CGG | - | chr4.3:31155907-31155926 | None:intergenic | 35.0% | |
! | AGATTGTGCAGTGATTTTGT+TGG | - | chr4.3:31156039-31156058 | None:intergenic | 35.0% |
! | CTCTATTGACTGTTTCTTCT+TGG | + | chr4.3:31156960-31156979 | MS.gene031756:CDS | 35.0% |
! | GATGATGATGTTGATGTTGT+TGG | - | chr4.3:31155410-31155429 | None:intergenic | 35.0% |
! | TTGTGATACCTAGGATGTTT+TGG | - | chr4.3:31155434-31155453 | None:intergenic | 35.0% |
!! | AAGGTTTTGATGGAAAGTTG+TGG | + | chr4.3:31156803-31156822 | MS.gene031756:CDS | 35.0% |
!! | AATTTCTGGTATACCTGCTA+TGG | + | chr4.3:31156304-31156323 | MS.gene031756:CDS | 35.0% |
!! | CAATTGCTTGATTTGGTTTG+TGG | - | chr4.3:31155932-31155951 | None:intergenic | 35.0% |
!! | GTGAAATTGATTTGCTGAGA+TGG | - | chr4.3:31155965-31155984 | None:intergenic | 35.0% |
!! | TGCAGTGATTTTGTTGGTTA+AGG | - | chr4.3:31156033-31156052 | None:intergenic | 35.0% |
!!! | AAGTTGTGGTTTTGAATCTG+TGG | + | chr4.3:31156817-31156836 | MS.gene031756:CDS | 35.0% |
!!! | AGTTGTGGTTTTGAATCTGT+GGG | + | chr4.3:31156818-31156837 | MS.gene031756:CDS | 35.0% |
!!! | TCAACCTGCTTTTTTGTCTT+TGG | + | chr4.3:31156922-31156941 | MS.gene031756:CDS | 35.0% |
!!! | TGCTGCTTTTTTTGAGAGTT+TGG | + | chr4.3:31156664-31156683 | MS.gene031756:CDS | 35.0% |
AGCTCAATAGGCGTAAGAAT+CGG | - | chr4.3:31156422-31156441 | None:intergenic | 40.0% | |
ATATGGGCATGCATCGTTTA+AGG | - | chr4.3:31156123-31156142 | None:intergenic | 40.0% | |
CAAGCCAAAGACAAAAAAGC+AGG | - | chr4.3:31156929-31156948 | None:intergenic | 40.0% | |
CATCATCACCAAAACATCCT+AGG | + | chr4.3:31155423-31155442 | MS.gene031756:CDS | 40.0% | |
CTTGTTGAGCTATTGCCATT+AGG | - | chr4.3:31155341-31155360 | None:intergenic | 40.0% | |
GAGTGAAGCAATTTCGGTTA+GGG | - | chr4.3:31155901-31155920 | None:intergenic | 40.0% | |
GTAGCTGAAATCGATGAAAC+TGG | - | chr4.3:31156344-31156363 | None:intergenic | 40.0% | |
TGAGTGAAGCAATTTCGGTT+AGG | - | chr4.3:31155902-31155921 | None:intergenic | 40.0% | |
TGGTGAAGGAAAGTTGAAAG+CGG | - | chr4.3:31155604-31155623 | None:intergenic | 40.0% | |
TTGAAATGGGTCGGTGAAAT+CGG | - | chr4.3:31155553-31155572 | None:intergenic | 40.0% | |
TTGCTTGGTAGGAGAATTGA+TGG | + | chr4.3:31156737-31156756 | MS.gene031756:CDS | 40.0% | |
! | TAAGGTATCCATCCAGTCAT+CGG | - | chr4.3:31155670-31155689 | None:intergenic | 40.0% |
! | TGAAAACGACGATGTCGTTT+CGG | - | chr4.3:31155853-31155872 | None:intergenic | 40.0% |
! | TTGTTGTTGTTGTTGTGCCA+TGG | - | chr4.3:31155480-31155499 | None:intergenic | 40.0% |
!! | AAACGGGTTGAGATGGAAAT+CGG | - | chr4.3:31155715-31155734 | None:intergenic | 40.0% |
!! | AGAACAGTGGAAGGTTTTGA+TGG | + | chr4.3:31156793-31156812 | MS.gene031756:CDS | 40.0% |
!! | AGGAGAATTGATGGTGTGAT+TGG | + | chr4.3:31156746-31156765 | MS.gene031756:CDS | 40.0% |
!! | ATGATGAAAACGGGTTGAGA+TGG | - | chr4.3:31155722-31155741 | None:intergenic | 40.0% |
!! | GTTTCATCGATTTCAGCTAC+CGG | + | chr4.3:31156344-31156363 | MS.gene031756:CDS | 40.0% |
!! | TGATTTGCTGAGATGGGTTA+GGG | - | chr4.3:31155958-31155977 | None:intergenic | 40.0% |
!! | TTGATTTGCTGAGATGGGTT+AGG | - | chr4.3:31155959-31155978 | None:intergenic | 40.0% |
!!! | CAAACGAAGCGCTTTTTCAA+CGG | - | chr4.3:31156540-31156559 | None:intergenic | 40.0% |
!!! | CGGTTAGGGTTTTAAGAAGT+GGG | - | chr4.3:31155887-31155906 | None:intergenic | 40.0% |
!!! | CTGCTTTTTTGTCTTTGGCT+TGG | + | chr4.3:31156927-31156946 | MS.gene031756:CDS | 40.0% |
!!! | GGTTTTAAGAAGTGGGTTTG+TGG | - | chr4.3:31155880-31155899 | None:intergenic | 40.0% |
!!! | TCGGTTAGGGTTTTAAGAAG+TGG | - | chr4.3:31155888-31155907 | None:intergenic | 40.0% |
AGAGAGGGTTTGTGATACCT+AGG | - | chr4.3:31155443-31155462 | None:intergenic | 45.0% | |
AGGAAAGTTGAAAGCGGGAT+CGG | - | chr4.3:31155598-31155617 | None:intergenic | 45.0% | |
ATGGAAATCGGAGTGGTTGT+CGG | - | chr4.3:31155703-31155722 | None:intergenic | 45.0% | |
GAAGTTCCTAAAGCCATAGC+AGG | - | chr4.3:31156320-31156339 | None:intergenic | 45.0% | |
GATGTAGTGAGACAGAGAGA+GGG | - | chr4.3:31155458-31155477 | None:intergenic | 45.0% | |
GCATTTGCAACTCGTTCTTC+TGG | + | chr4.3:31156263-31156282 | MS.gene031756:CDS | 45.0% | |
GCGATTCTTGAAGCAACAGA+AGG | + | chr4.3:31156173-31156192 | MS.gene031756:CDS | 45.0% | |
GGAGGATAAAGAACAGTGGA+AGG | + | chr4.3:31156784-31156803 | MS.gene031756:CDS | 45.0% | |
GGATGGAGGATAAAGAACAG+TGG | + | chr4.3:31156780-31156799 | MS.gene031756:CDS | 45.0% | |
GGTATACCTGCTATGGCTTT+AGG | + | chr4.3:31156311-31156330 | MS.gene031756:CDS | 45.0% | |
GGTGAAGGAAAGTTGAAAGC+GGG | - | chr4.3:31155603-31155622 | None:intergenic | 45.0% | |
GTAGGTGGAAAAGACAAAGG+TGG | - | chr4.3:31155531-31155550 | None:intergenic | 45.0% | |
TCGGTAGGTGGAAAAGACAA+AGG | - | chr4.3:31155534-31155553 | None:intergenic | 45.0% | |
TCTCTGTCTCACTACATCCA+TGG | + | chr4.3:31155460-31155479 | MS.gene031756:CDS | 45.0% | |
! | ACGAAGCTAGTTTGACGACT+CGG | + | chr4.3:31156600-31156619 | MS.gene031756:CDS | 45.0% |
! | CAAGTGGAGAGTCTTTTGCT+TGG | + | chr4.3:31156722-31156741 | MS.gene031756:CDS | 45.0% |
! | TGATGGTGTGATTGGTGTGA+GGG | + | chr4.3:31156754-31156773 | MS.gene031756:CDS | 45.0% |
! | TGGAGAGTCTTTTGCTTGGT+AGG | + | chr4.3:31156726-31156745 | MS.gene031756:CDS | 45.0% |
! | TTCACCGACCCATTTCAAGT+CGG | + | chr4.3:31155555-31155574 | MS.gene031756:CDS | 45.0% |
!! | CGTTGAAAAAGCGCTTCGTT+TGG | + | chr4.3:31156538-31156557 | MS.gene031756:CDS | 45.0% |
!! | TTGATGGTGTGATTGGTGTG+AGG | + | chr4.3:31156753-31156772 | MS.gene031756:CDS | 45.0% |
!!! | TTGGTGTCGTTTTTGCGTTG+CGG | - | chr4.3:31155825-31155844 | None:intergenic | 45.0% |
AAACGGAAGGTGGTTGAGTG+AGG | - | chr4.3:31155633-31155652 | None:intergenic | 50.0% | |
AACGGAAGGTGGTTGAGTGA+GGG | - | chr4.3:31155632-31155651 | None:intergenic | 50.0% | |
AATGGGTCGGTGAAATCGGT+AGG | - | chr4.3:31155549-31155568 | None:intergenic | 50.0% | |
CCAGTCATCGGAGTCGAAAT+CGG | - | chr4.3:31155658-31155677 | None:intergenic | 50.0% | |
CGCTGACAGTGGAAACCTAA+TGG | + | chr4.3:31155323-31155342 | MS.gene031756:CDS | 50.0% | |
CGGAGTCGAAATCGGAGAAA+CGG | - | chr4.3:31155650-31155669 | None:intergenic | 50.0% | |
CTCTCCACTTGAAACCTCTC+TGG | - | chr4.3:31156713-31156732 | None:intergenic | 50.0% | |
GAAATCGGAGAAACGGAAGG+TGG | - | chr4.3:31155643-31155662 | None:intergenic | 50.0% | |
GGATGTAGTGAGACAGAGAG+AGG | - | chr4.3:31155459-31155478 | None:intergenic | 50.0% | |
GGTTGAGATGGAAATCGGAG+TGG | - | chr4.3:31155710-31155729 | None:intergenic | 50.0% | |
GTCGAAATCGGAGAAACGGA+AGG | - | chr4.3:31155646-31155665 | None:intergenic | 50.0% | |
TTCGCCAGAGAGGTTTCAAG+TGG | + | chr4.3:31156706-31156725 | MS.gene031756:CDS | 50.0% | |
TTTCGACTCCGATGACTGGA+TGG | + | chr4.3:31155659-31155678 | MS.gene031756:CDS | 50.0% | |
! | AAACGACGATGTCGTTTCGG+TGG | - | chr4.3:31155850-31155869 | None:intergenic | 50.0% |
! | CGAAGCTAGTTTGACGACTC+GGG | + | chr4.3:31156601-31156620 | MS.gene031756:CDS | 50.0% |
! | GATTGGGATTTGGAGTGGCA+CGG | - | chr4.3:31155790-31155809 | None:intergenic | 50.0% |
! | GGTTGGATTGGGATTTGGAG+TGG | - | chr4.3:31155795-31155814 | None:intergenic | 50.0% |
! | TCACCGACCCATTTCAAGTC+GGG | + | chr4.3:31155556-31155575 | MS.gene031756:CDS | 50.0% |
! | TGAGAGTTTGGAGCCGAACA+TGG | + | chr4.3:31156676-31156695 | MS.gene031756:CDS | 50.0% |
! | TGGGTGGTTGGATTGGGATT+TGG | - | chr4.3:31155800-31155819 | None:intergenic | 50.0% |
!! | AAAGCGGGATCGGTGTTTTC+AGG | - | chr4.3:31155588-31155607 | None:intergenic | 50.0% |
!! | TCGTTTTTGCGTTGCGGAGT+GGG | - | chr4.3:31155819-31155838 | None:intergenic | 50.0% |
CCGATTTCGACTCCGATGAC+TGG | + | chr4.3:31155655-31155674 | MS.gene031756:CDS | 55.0% | |
CGGGTCGGGCATGATGAAAA+CGG | - | chr4.3:31155732-31155751 | None:intergenic | 55.0% | |
GATTGGTGTGAGGGAGAGGA+TGG | + | chr4.3:31156763-31156782 | MS.gene031756:CDS | 55.0% | |
GGCGAATCCAACGCCATGTT+CGG | - | chr4.3:31156692-31156711 | None:intergenic | 55.0% | |
GGGTCGGGCATGATGAAAAC+GGG | - | chr4.3:31155731-31155750 | None:intergenic | 55.0% | |
GGTAGGAGAAGATCCGGTTG+CGG | - | chr4.3:31155762-31155781 | None:intergenic | 55.0% | |
GTGTGATTGGTGTGAGGGAG+AGG | + | chr4.3:31156759-31156778 | MS.gene031756:CDS | 55.0% | |
GTTGTCGGCAGCGGACATTA+AGG | - | chr4.3:31155688-31155707 | None:intergenic | 55.0% | |
! | CGACCCATTTCAAGTCGGGT+CGG | + | chr4.3:31155560-31155579 | MS.gene031756:CDS | 55.0% |
! | CGACCCGACTTGAAATGGGT+CGG | - | chr4.3:31155562-31155581 | None:intergenic | 55.0% |
! | CGATGTCGTTTCGGTGGTGT+TGG | - | chr4.3:31155844-31155863 | None:intergenic | 55.0% |
! | GACCCATTTCAAGTCGGGTC+GGG | + | chr4.3:31155561-31155580 | MS.gene031756:CDS | 55.0% |
! | GACCCGACCCGACTTGAAAT+GGG | - | chr4.3:31155566-31155585 | None:intergenic | 55.0% |
! | GCTAGTTTGACGACTCGGGT+TGG | + | chr4.3:31156605-31156624 | MS.gene031756:CDS | 55.0% |
! | GCTTACATGTGCGCTGACAG+TGG | + | chr4.3:31155312-31155331 | MS.gene031756:CDS | 55.0% |
! | TTTGGAGCCGAACATGGCGT+TGG | + | chr4.3:31156682-31156701 | MS.gene031756:CDS | 55.0% |
! | TTTTTGCGTTGCGGAGTGGG+TGG | - | chr4.3:31155816-31155835 | None:intergenic | 55.0% |
!!! | GTCGTTTTTGCGTTGCGGAG+TGG | - | chr4.3:31155820-31155839 | None:intergenic | 55.0% |
ATCCGGTTGCGGTGAGAGTC+GGG | - | chr4.3:31155751-31155770 | None:intergenic | 60.0% | |
ATCGGAGTGGTTGTCGGCAG+CGG | - | chr4.3:31155697-31155716 | None:intergenic | 60.0% | |
GAGTGAGGGTCGAGTGGTGA+AGG | - | chr4.3:31155618-31155637 | None:intergenic | 60.0% | |
GATCCGGTTGCGGTGAGAGT+CGG | - | chr4.3:31155752-31155771 | None:intergenic | 60.0% | |
GCGGAGTGGGTGGTTGGATT+GGG | - | chr4.3:31155806-31155825 | None:intergenic | 60.0% | |
GGGTCGGTGAAATCGGTAGG+TGG | - | chr4.3:31155546-31155565 | None:intergenic | 60.0% | |
GTGGTTGAGTGAGGGTCGAG+TGG | - | chr4.3:31155624-31155643 | None:intergenic | 60.0% | |
TGCGGAGTGGGTGGTTGGAT+TGG | - | chr4.3:31155807-31155826 | None:intergenic | 60.0% | |
TGGTGTGAGGGAGAGGATGG+AGG | + | chr4.3:31156766-31156785 | MS.gene031756:CDS | 60.0% | |
! | ATTTGGAGTGGCACGGTGGC+GGG | - | chr4.3:31155783-31155802 | None:intergenic | 60.0% |
! | GATTTGGAGTGGCACGGTGG+CGG | - | chr4.3:31155784-31155803 | None:intergenic | 60.0% |
! | GGACCCGACCCGACTTGAAA+TGG | - | chr4.3:31155567-31155586 | None:intergenic | 60.0% |
! | TGGCGTTGGATTCGCCAGAG+AGG | + | chr4.3:31156696-31156715 | MS.gene031756:CDS | 60.0% |
! | TGGGATTTGGAGTGGCACGG+TGG | - | chr4.3:31155787-31155806 | None:intergenic | 60.0% |
!! | GTGGCGGGTAGGAGAAGATC+CGG | - | chr4.3:31155768-31155787 | None:intergenic | 60.0% |
GACCCGACTCTCACCGCAAC+CGG | + | chr4.3:31155746-31155765 | MS.gene031756:CDS | 65.0% | |
GGTTGCGGTGAGAGTCGGGT+CGG | - | chr4.3:31155747-31155766 | None:intergenic | 65.0% | |
GTTGCGGTGAGAGTCGGGTC+GGG | - | chr4.3:31155746-31155765 | None:intergenic | 65.0% | |
TGCGTTGCGGAGTGGGTGGT+TGG | - | chr4.3:31155812-31155831 | None:intergenic | 65.0% | |
!! | GGAGTGGCACGGTGGCGGGT+AGG | - | chr4.3:31155779-31155798 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 31155309 | 31156988 | 31155309 | ID=MS.gene031756 |
chr4.3 | mRNA | 31155309 | 31156988 | 31155309 | ID=MS.gene031756.t1;Parent=MS.gene031756 |
chr4.3 | exon | 31155309 | 31156988 | 31155309 | ID=MS.gene031756.t1.exon1;Parent=MS.gene031756.t1 |
chr4.3 | CDS | 31155309 | 31156988 | 31155309 | ID=cds.MS.gene031756.t1;Parent=MS.gene031756.t1 |
Gene Sequence |
Protein sequence |