AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene031839

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene031839.t1 MTR_4g075980 97.333 300 7 1 1 300 1 299 0.0 607
MS.gene031839.t1 MTR_4g134460 53.947 152 65 2 14 162 53 202 1.75e-55 186
MS.gene031839.t1 MTR_8g467490 45.771 201 89 5 4 188 1 197 1.06e-52 177
MS.gene031839.t1 MTR_6g011860 46.231 199 88 5 16 199 16 210 3.61e-52 176
MS.gene031839.t1 MTR_5g040420 43.684 190 90 3 12 188 11 196 2.95e-49 168
MS.gene031839.t1 MTR_2g093810 39.056 233 120 4 17 237 16 238 3.42e-47 161
MS.gene031839.t1 MTR_5g012080 41.791 201 105 5 17 207 9 207 2.40e-46 159
MS.gene031839.t1 MTR_2g080010 40.000 210 104 5 6 198 5 209 4.87e-46 159
MS.gene031839.t1 MTR_5g090970 36.910 233 124 4 12 221 15 247 1.31e-45 156
MS.gene031839.t1 MTR_7g085220 43.229 192 89 4 9 180 1 192 1.46e-45 157
MS.gene031839.t1 MTR_3g088110 45.783 166 78 3 9 166 1 162 3.80e-45 155
MS.gene031839.t1 MTR_5g090970 36.910 233 123 5 12 221 15 246 5.00e-44 152
MS.gene031839.t1 MTR_4g036030 35.874 223 114 6 17 213 9 228 5.58e-44 153
MS.gene031839.t1 MTR_5g041940 47.531 162 73 2 17 169 5 163 6.22e-44 150
MS.gene031839.t1 MTR_1g097300 39.796 196 108 3 15 208 19 206 7.40e-44 157
MS.gene031839.t1 MTR_5g014300 39.535 215 113 5 17 219 8 217 1.32e-43 152
MS.gene031839.t1 MTR_8g059170 48.750 160 71 3 13 164 11 167 1.54e-43 152
MS.gene031839.t1 MTR_8g063550 40.183 219 106 5 16 212 7 222 2.73e-43 151
MS.gene031839.t1 MTR_8g063550 40.367 218 105 5 16 211 7 221 3.25e-43 153
MS.gene031839.t1 MTR_2g079990 48.750 160 73 4 13 166 13 169 3.48e-43 151
MS.gene031839.t1 MTR_2g064090 42.690 171 84 4 17 179 8 172 3.71e-43 151
MS.gene031839.t1 MTR_6g477900 43.636 165 83 3 17 174 8 169 3.85e-43 148
MS.gene031839.t1 MTR_4g081870 46.951 164 75 2 17 171 11 171 4.21e-43 149
MS.gene031839.t1 MTR_4g101680 47.682 151 70 3 17 161 9 156 4.42e-43 151
MS.gene031839.t1 MTR_8g063550 40.367 218 105 5 16 211 7 221 8.14e-43 152
MS.gene031839.t1 MTR_4g089135 41.489 188 80 4 6 164 5 191 1.37e-42 149
MS.gene031839.t1 MTR_3g435150 45.977 174 80 6 4 166 1 171 1.43e-42 148
MS.gene031839.t1 MTR_3g096140 44.375 160 79 3 9 161 1 157 1.56e-42 147
MS.gene031839.t1 MTR_4g035590 45.882 170 84 4 17 181 10 176 2.23e-42 149
MS.gene031839.t1 MTR_8g076110 45.679 162 79 4 12 167 3 161 2.31e-42 148
MS.gene031839.t1 MTR_3g064580 42.857 182 91 4 17 188 8 186 2.51e-42 154
MS.gene031839.t1 MTR_5g021710 44.654 159 79 3 12 164 5 160 2.86e-42 149
MS.gene031839.t1 MTR_4g108760 43.429 175 84 5 4 166 1 172 2.91e-42 149
MS.gene031839.t1 MTR_7g100990 40.000 205 109 4 6 210 2 192 1.26e-41 147
MS.gene031839.t1 MTR_2157s0010 43.195 169 82 2 17 171 10 178 1.66e-41 144
MS.gene031839.t1 MTR_3g096140 44.375 160 79 3 9 161 1 157 1.69e-41 147
MS.gene031839.t1 MTR_8g024480 45.143 175 76 4 17 174 17 188 3.45e-41 148
MS.gene031839.t1 MTR_2g068920 38.261 230 110 6 1 204 1 224 3.62e-41 144
MS.gene031839.t1 MTR_2g062730 46.108 167 82 5 17 177 12 176 4.70e-41 145
MS.gene031839.t1 MTR_5g076850 45.513 156 75 4 17 165 8 160 5.21e-41 150
MS.gene031839.t1 MTR_4g098630 43.956 182 95 3 17 191 8 189 5.47e-41 145
MS.gene031839.t1 MTR_3g116070 38.914 221 107 8 1 207 2 208 5.96e-41 145
MS.gene031839.t1 MTR_7g105170 43.023 172 78 6 17 171 6 174 6.15e-41 143
MS.gene031839.t1 MTR_1g096430 45.963 161 78 3 9 163 1 158 6.15e-41 145
MS.gene031839.t1 MTR_3g096920 43.671 158 77 2 17 166 9 162 8.95e-41 143
MS.gene031839.t1 MTR_6g084430 40.854 164 91 2 17 177 7 167 1.06e-40 144
MS.gene031839.t1 MTR_3g109340 44.937 158 83 2 12 166 19 175 1.86e-40 144
MS.gene031839.t1 MTR_3g109340 44.654 159 83 2 12 166 19 176 2.80e-40 144
MS.gene031839.t1 MTR_2g068880 41.799 189 85 5 1 164 1 189 3.09e-40 142
MS.gene031839.t1 MTR_6g012670 43.750 160 80 2 17 169 22 178 5.80e-40 142
MS.gene031839.t1 MTR_2g079990 51.471 136 62 3 13 147 13 145 1.04e-39 143
MS.gene031839.t1 MTR_6g032770 38.835 206 110 5 7 197 9 213 5.28e-39 141
MS.gene031839.t1 MTR_8g094580 44.025 159 76 4 17 166 9 163 6.82e-39 138
MS.gene031839.t1 MTR_1g008740 43.125 160 85 3 12 166 10 168 7.97e-39 140
MS.gene031839.t1 MTR_8g093580 47.712 153 70 3 16 161 7 156 8.02e-39 142
MS.gene031839.t1 MTR_2g078700 51.181 127 61 1 17 143 25 150 8.69e-39 140
MS.gene031839.t1 MTR_1g008740 43.125 160 85 3 12 166 24 182 9.77e-39 140
MS.gene031839.t1 MTR_4g052620 39.394 198 105 5 12 196 2 197 2.01e-38 136
MS.gene031839.t1 MTR_0036s0150 46.154 156 72 5 17 164 7 158 3.97e-38 141
MS.gene031839.t1 MTR_3g096920 47.287 129 64 1 17 145 9 133 6.28e-38 137
MS.gene031839.t1 MTR_1g090720 44.162 197 87 5 17 193 44 237 6.44e-38 140
MS.gene031839.t1 MTR_1g090723 43.871 155 77 4 17 164 10 161 3.47e-37 139
MS.gene031839.t1 MTR_1g090723 43.871 155 77 4 17 164 10 161 5.42e-37 139
MS.gene031839.t1 MTR_7g085260 43.038 158 82 3 17 166 19 176 6.80e-37 135
MS.gene031839.t1 MTR_1g090723 44.872 156 75 5 17 164 10 162 6.92e-37 139
MS.gene031839.t1 MTR_2g064470 43.373 166 78 5 4 161 1 158 4.93e-36 131
MS.gene031839.t1 MTR_7g005280 41.011 178 94 5 4 174 1 174 5.03e-36 130
MS.gene031839.t1 MTR_5g069030 45.695 151 72 3 18 161 28 175 5.82e-36 136
MS.gene031839.t1 MTR_1g069805 37.368 190 104 5 17 203 12 189 6.95e-36 130
MS.gene031839.t1 MTR_3g093040 36.967 211 120 5 14 216 106 311 7.39e-36 131
MS.gene031839.t1 MTR_7g011130 45.695 151 75 3 1 147 1 148 9.17e-36 132
MS.gene031839.t1 MTR_3g093050 45.161 155 74 4 15 161 21 172 1.23e-35 135
MS.gene031839.t1 MTR_3g093050 45.161 155 74 4 15 161 21 172 1.56e-35 135
MS.gene031839.t1 MTR_3g070030 45.033 151 76 3 1 147 1 148 1.68e-35 131
MS.gene031839.t1 MTR_7g097090 41.497 147 80 3 17 160 12 155 1.24e-34 127
MS.gene031839.t1 MTR_2g086690 40.805 174 83 6 17 174 6 175 2.73e-34 125
MS.gene031839.t1 MTR_7g011120 36.408 206 120 4 9 206 1 203 5.12e-33 123
MS.gene031839.t1 MTR_2g086880 40.411 146 81 3 16 160 19 159 7.64e-33 127
MS.gene031839.t1 MTR_8g099750 48.819 127 62 2 17 143 16 139 8.28e-33 120
MS.gene031839.t1 MTR_2g086880 40.411 146 81 3 16 160 19 159 1.04e-32 126
MS.gene031839.t1 MTR_3g096140 43.478 138 68 3 31 161 2 136 4.28e-32 122
MS.gene031839.t1 MTR_8g023860 43.056 144 77 4 18 158 15 156 1.72e-29 116
MS.gene031839.t1 MTR_3g098810 43.357 143 76 3 4 143 1 141 2.85e-29 110
MS.gene031839.t1 MTR_8g023840 42.361 144 78 4 18 158 14 155 3.25e-29 115
MS.gene031839.t1 MTR_3g098810 38.857 175 91 4 4 164 1 173 1.27e-28 110
MS.gene031839.t1 MTR_8g023930 38.095 168 91 5 18 182 27 184 2.79e-27 110
MS.gene031839.t1 MTR_8g023900 39.474 152 81 6 18 162 15 162 1.01e-26 109
MS.gene031839.t1 MTR_8g023900 39.456 147 84 4 18 161 196 340 5.94e-26 107
MS.gene031839.t1 MTR_8g094580 46.018 113 48 4 63 166 1 109 9.21e-26 102
MS.gene031839.t1 MTR_3g070040 30.603 232 146 5 19 241 12 237 2.13e-25 103
MS.gene031839.t1 MTR_4g094302 35.256 156 81 3 17 161 13 159 1.77e-22 92.8
MS.gene031839.t1 MTR_8g023880 38.889 162 74 8 18 161 10 164 6.20e-22 93.2
MS.gene031839.t1 MTR_4g094302 38.583 127 69 2 17 143 13 130 1.13e-21 89.7
MS.gene031839.t1 MTR_7g070140 42.697 89 48 2 68 154 17 104 1.91e-20 85.9
MS.gene031839.t1 MTR_8g093790 34.568 162 75 8 17 173 12 147 1.94e-15 73.6
MS.gene031839.t1 MTR_7g070150 44.828 58 30 1 109 164 3 60 4.46e-13 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene031839.t1 AT2G17040 60.140 286 96 7 14 297 5 274 1.00e-110 322
MS.gene031839.t1 AT2G02450 53.642 151 65 2 14 161 50 198 1.42e-56 187
MS.gene031839.t1 AT2G02450 53.642 151 65 2 14 161 50 198 1.56e-56 188
MS.gene031839.t1 AT5G39820 58.647 133 54 1 12 144 17 148 3.23e-52 174
MS.gene031839.t1 AT1G26870 44.393 214 90 6 12 209 13 213 5.68e-49 168
MS.gene031839.t1 AT1G62700 47.134 157 74 3 17 167 9 162 1.44e-46 161
MS.gene031839.t1 AT1G62700 47.134 157 74 3 17 167 9 162 1.44e-46 161
MS.gene031839.t1 AT3G10480 51.316 152 64 3 17 161 29 177 5.86e-46 161
MS.gene031839.t1 AT3G10480 51.634 153 63 4 17 161 29 178 1.13e-45 160
MS.gene031839.t1 AT4G27410 50.633 158 69 5 13 164 11 165 3.72e-45 155
MS.gene031839.t1 AT3G10490 49.359 156 62 5 17 161 29 178 8.33e-45 152
MS.gene031839.t1 AT1G69490 44.134 179 87 3 10 178 3 178 2.46e-44 152
MS.gene031839.t1 AT2G43000 48.408 157 72 3 16 166 19 172 2.55e-44 152
MS.gene031839.t1 AT1G12260 43.386 189 85 5 17 199 9 181 3.49e-44 154
MS.gene031839.t1 AT1G34180 43.429 175 89 3 13 185 14 180 5.68e-44 155
MS.gene031839.t1 AT1G01720 48.052 154 67 3 17 161 9 158 6.18e-44 152
MS.gene031839.t1 AT3G10490 49.359 156 62 5 17 161 29 178 6.50e-44 155
MS.gene031839.t1 AT1G12260 43.386 189 85 5 17 199 9 181 9.35e-44 154
MS.gene031839.t1 AT3G17730 46.250 160 76 3 17 169 8 164 1.09e-43 150
MS.gene031839.t1 AT1G77450 39.207 227 114 6 17 228 12 229 1.77e-43 149
MS.gene031839.t1 AT5G04410 49.091 165 73 5 17 173 11 172 2.01e-43 156
MS.gene031839.t1 AT1G34180 43.429 175 89 3 13 185 14 180 3.32e-43 155
MS.gene031839.t1 AT5G08790 39.423 208 107 6 13 209 4 203 4.37e-43 149
MS.gene031839.t1 AT4G17980 49.351 154 68 4 17 161 8 160 4.50e-43 149
MS.gene031839.t1 AT4G17980 49.351 154 68 4 17 161 8 160 7.39e-43 149
MS.gene031839.t1 AT1G61110 42.935 184 85 3 17 182 18 199 9.13e-43 149
MS.gene031839.t1 AT1G65910 43.011 186 91 5 17 194 8 186 1.58e-42 154
MS.gene031839.t1 AT3G04070 45.963 161 71 3 17 162 12 171 1.83e-42 149
MS.gene031839.t1 AT1G34190 43.429 175 89 3 13 185 14 180 1.91e-42 153
MS.gene031839.t1 AT5G46590 49.673 153 67 3 17 161 8 158 2.01e-42 148
MS.gene031839.t1 AT5G61430 46.012 163 77 4 12 166 12 171 3.03e-42 148
MS.gene031839.t1 AT3G03200 42.632 190 94 4 17 198 8 190 4.69e-42 151
MS.gene031839.t1 AT3G15500 46.875 160 76 3 13 166 11 167 5.06e-42 147
MS.gene031839.t1 AT5G62380 47.682 151 70 3 17 161 9 156 5.81e-42 148
MS.gene031839.t1 AT5G62380 47.682 151 70 3 17 161 9 156 5.81e-42 148
MS.gene031839.t1 AT4G27410 46.286 175 68 6 13 164 11 182 7.59e-42 147
MS.gene031839.t1 AT3G15510 37.264 212 112 4 19 214 21 227 7.71e-42 148
MS.gene031839.t1 AT1G33060 42.857 203 96 5 9 198 12 207 1.16e-41 152
MS.gene031839.t1 AT1G33060 42.857 203 96 5 9 198 12 207 1.18e-41 152
MS.gene031839.t1 AT5G46590 53.788 132 57 2 17 146 8 137 1.39e-41 145
MS.gene031839.t1 AT4G36160 48.344 151 69 4 17 161 12 159 1.40e-41 148
MS.gene031839.t1 AT4G36160 48.344 151 69 4 17 161 12 159 1.40e-41 148
MS.gene031839.t1 AT4G36160 48.344 151 69 4 17 161 16 163 1.76e-41 147
MS.gene031839.t1 AT2G18060 43.114 167 83 4 4 164 1 161 2.35e-41 147
MS.gene031839.t1 AT2G18060 43.114 167 83 4 4 164 1 161 2.35e-41 147
MS.gene031839.t1 AT3G10500 46.452 155 73 4 17 164 11 162 2.74e-41 150
MS.gene031839.t1 AT5G39610 47.468 158 72 4 12 161 16 170 5.00e-41 144
MS.gene031839.t1 AT5G63790 42.529 174 85 4 13 175 47 216 6.42e-41 144
MS.gene031839.t1 AT5G63790 42.529 174 85 4 13 175 57 226 6.69e-41 144
MS.gene031839.t1 AT1G34180 39.572 187 91 3 13 185 14 192 7.66e-41 147
MS.gene031839.t1 AT1G52890 45.625 160 78 3 13 166 11 167 8.82e-41 144
MS.gene031839.t1 AT1G33280 45.513 156 77 3 17 167 10 162 1.58e-40 143
MS.gene031839.t1 AT4G10350 43.023 172 87 3 17 180 11 179 1.83e-40 144
MS.gene031839.t1 AT5G07680 38.298 235 125 7 12 238 13 235 2.19e-40 143
MS.gene031839.t1 AT2G46770 41.270 189 87 3 1 168 2 187 2.99e-40 144
MS.gene031839.t1 AT5G17260 45.098 153 73 3 17 161 8 157 3.34e-40 146
MS.gene031839.t1 AT5G07680 37.991 229 123 6 17 238 5 221 3.47e-40 142
MS.gene031839.t1 AT1G34180 39.572 187 91 3 13 185 14 192 3.59e-40 147
MS.gene031839.t1 AT1G71930 45.033 151 74 3 17 161 11 158 4.17e-40 142
MS.gene031839.t1 AT1G71930 45.033 151 74 3 17 161 11 158 4.17e-40 142
MS.gene031839.t1 AT3G15170 45.570 158 78 2 12 162 17 173 4.57e-40 142
MS.gene031839.t1 AT2G24430 42.767 159 86 2 12 166 13 170 4.88e-40 142
MS.gene031839.t1 AT2G24430 42.767 159 86 2 12 166 13 170 4.88e-40 142
MS.gene031839.t1 AT3G04070 41.808 177 71 3 17 162 12 187 6.17e-40 143
MS.gene031839.t1 AT3G29035 51.493 134 61 2 11 143 19 149 9.12e-40 141
MS.gene031839.t1 AT1G76420 44.156 154 81 2 17 166 24 176 1.45e-39 141
MS.gene031839.t1 AT3G18400 42.857 154 81 2 17 166 7 157 2.29e-39 140
MS.gene031839.t1 AT3G10480 42.473 186 63 5 17 161 29 211 2.78e-39 144
MS.gene031839.t1 AT5G18270 45.395 152 74 3 17 161 23 172 3.00e-39 140
MS.gene031839.t1 AT5G66300 43.590 156 78 3 17 165 14 166 3.78e-39 139
MS.gene031839.t1 AT5G09330 46.711 152 71 4 17 161 8 156 4.32e-39 143
MS.gene031839.t1 AT5G09330 46.711 152 71 4 17 161 8 156 4.32e-39 143
MS.gene031839.t1 AT5G09330 46.711 152 71 4 17 161 8 156 4.32e-39 143
MS.gene031839.t1 AT5G09330 46.711 152 71 4 17 161 8 156 4.32e-39 143
MS.gene031839.t1 AT5G09330 46.711 152 71 4 17 161 8 156 4.32e-39 143
MS.gene031839.t1 AT5G18270 45.395 152 74 3 17 161 23 172 4.67e-39 140
MS.gene031839.t1 AT1G32770 44.118 170 72 5 17 167 18 183 8.41e-39 140
MS.gene031839.t1 AT5G53950 41.089 202 107 5 13 204 15 214 1.18e-38 140
MS.gene031839.t1 AT3G61910 41.753 194 94 6 17 200 13 197 1.28e-38 139
MS.gene031839.t1 AT3G04060 45.395 152 74 3 17 161 22 171 2.12e-38 138
MS.gene031839.t1 AT5G64060 46.053 152 72 4 17 161 8 156 4.14e-38 138
MS.gene031839.t1 AT1G32510 45.783 166 77 4 17 169 8 173 7.68e-38 135
MS.gene031839.t1 AT1G52880 43.750 160 76 2 19 164 21 180 1.19e-37 136
MS.gene031839.t1 AT1G79580 47.742 155 74 3 17 166 19 171 1.55e-37 137
MS.gene031839.t1 AT1G79580 47.742 155 74 3 17 166 19 171 1.55e-37 137
MS.gene031839.t1 AT1G79580 47.742 155 74 3 17 166 19 171 1.55e-37 137
MS.gene031839.t1 AT1G79580 47.742 155 74 3 17 166 19 171 1.55e-37 137
MS.gene031839.t1 AT1G79580 47.742 155 74 3 17 166 19 171 1.55e-37 137
MS.gene031839.t1 AT3G44350 39.691 194 98 7 18 198 8 195 2.06e-37 133
MS.gene031839.t1 AT1G56010 38.500 200 111 5 17 207 21 217 4.63e-37 134
MS.gene031839.t1 AT5G22380 38.144 194 104 6 12 192 3 193 4.94e-37 132
MS.gene031839.t1 AT3G12910 41.279 172 81 4 12 164 18 188 9.46e-37 133
MS.gene031839.t1 AT4G35580 45.806 155 73 4 15 161 8 159 1.09e-36 137
MS.gene031839.t1 AT4G35580 45.806 155 73 4 15 161 8 159 1.11e-36 137
MS.gene031839.t1 AT4G35580 45.806 155 73 4 15 161 8 159 1.22e-36 137
MS.gene031839.t1 AT1G54330 46.309 149 73 3 17 161 8 153 5.24e-36 131
MS.gene031839.t1 AT5G24590 43.243 185 91 5 15 191 12 190 6.40e-36 134
MS.gene031839.t1 AT3G12977 42.857 154 79 3 17 164 20 170 1.21e-35 130
MS.gene031839.t1 AT3G49530 41.667 180 94 5 15 186 12 188 1.30e-35 132
MS.gene031839.t1 AT5G04395 44.737 152 71 1 8 146 21 172 1.55e-35 127
MS.gene031839.t1 AT5G13180 46.980 149 71 3 17 161 16 160 2.21e-35 128
MS.gene031839.t1 AT3G49530 41.667 180 94 5 15 186 12 188 3.34e-35 132
MS.gene031839.t1 AT5G22290 37.696 191 109 4 15 199 21 207 9.57e-35 129
MS.gene031839.t1 AT2G33480 45.695 151 73 3 17 164 17 161 1.50e-34 126
MS.gene031839.t1 AT4G28530 41.566 166 73 5 17 162 12 173 1.63e-34 128
MS.gene031839.t1 AT2G33480 45.098 153 73 4 17 164 17 163 1.13e-33 124
MS.gene031839.t1 AT1G32870 48.408 157 67 4 17 164 12 163 9.67e-33 126
MS.gene031839.t1 AT1G32870 48.408 157 67 4 17 164 12 163 1.24e-32 126
MS.gene031839.t1 AT1G32870 48.408 157 67 4 17 164 48 199 1.83e-32 126
MS.gene031839.t1 AT3G44350 44.526 137 65 4 18 147 8 140 6.89e-32 116
MS.gene031839.t1 AT4G01550 43.791 153 77 4 16 162 5 154 1.04e-31 123
MS.gene031839.t1 AT2G27300 38.926 149 83 4 16 162 15 157 5.17e-31 119
MS.gene031839.t1 AT3G44290 40.136 147 82 3 15 160 14 155 1.96e-30 114
MS.gene031839.t1 AT3G44290 40.136 147 82 3 15 160 14 155 8.74e-30 115
MS.gene031839.t1 AT1G56010 51.376 109 42 4 63 163 1 106 1.00e-28 111
MS.gene031839.t1 AT4G01520 38.312 154 91 3 18 167 7 160 1.25e-28 112
MS.gene031839.t1 AT5G61430 47.748 111 48 3 63 166 1 108 6.18e-28 109
MS.gene031839.t1 AT4G01540 38.462 156 92 3 16 167 5 160 2.95e-27 110
MS.gene031839.t1 AT4G01540 38.462 156 92 3 16 167 5 160 3.67e-27 109
MS.gene031839.t1 AT4G01540 38.462 156 92 3 16 167 5 160 5.22e-27 109
MS.gene031839.t1 AT4G01540 38.462 156 92 3 16 167 5 160 5.66e-27 110
MS.gene031839.t1 AT3G12977 48.077 104 45 3 64 161 14 114 7.16e-27 105
MS.gene031839.t1 AT4G10350 43.220 118 59 2 68 180 18 132 2.00e-26 105
MS.gene031839.t1 AT5G64530 35.088 171 88 4 17 177 5 162 6.21e-22 91.3
MS.gene031839.t1 AT5G64530 39.535 129 65 3 17 145 5 120 1.13e-21 89.7
MS.gene031839.t1 AT2G33480 44.118 102 49 3 68 164 8 106 3.77e-21 89.7
MS.gene031839.t1 AT1G02250 37.333 150 86 4 18 162 6 152 1.65e-20 90.9
MS.gene031839.t1 AT1G02230 32.934 167 100 5 18 177 6 167 3.82e-19 87.0
MS.gene031839.t1 AT2G43000 44.792 96 44 3 77 166 2 94 3.61e-18 81.3
MS.gene031839.t1 AT3G04420 30.539 167 109 3 18 180 6 169 8.29e-18 82.0
MS.gene031839.t1 AT1G01010 34.118 170 93 7 18 174 6 169 1.58e-17 82.8
MS.gene031839.t1 AT3G04420 30.539 167 109 3 18 180 6 169 2.06e-17 81.6
MS.gene031839.t1 AT2G18060 47.297 74 33 2 94 164 3 73 8.71e-17 79.0
MS.gene031839.t1 AT4G28530 38.053 113 49 3 17 112 12 120 2.38e-16 78.6
MS.gene031839.t1 AT3G04430 41.739 115 50 6 21 127 6 111 4.34e-16 75.5
MS.gene031839.t1 AT3G10490 46.988 83 29 4 88 161 2 78 1.93e-15 76.3
MS.gene031839.t1 AT3G10490 46.988 83 29 4 88 161 2 78 1.93e-15 76.3
MS.gene031839.t1 AT3G56530 34.615 156 92 5 11 159 47 199 2.71e-15 75.5
MS.gene031839.t1 AT3G55210 31.928 166 95 6 17 167 13 175 5.43e-15 73.9
MS.gene031839.t1 AT5G22290 36.036 111 62 3 94 199 2 108 6.01e-15 73.2
MS.gene031839.t1 AT1G02220 32.414 145 88 4 18 158 6 144 2.71e-14 73.2
MS.gene031839.t1 AT5G14000 32.031 128 80 3 18 143 18 140 8.17e-14 68.2
MS.gene031839.t1 AT5G14000 28.324 173 112 6 14 179 13 180 1.65e-13 68.6
MS.gene031839.t1 AT5G50820 30.688 189 106 7 17 197 19 190 3.51e-12 64.7

Find 76 sgRNAs with CRISPR-Local

Find 154 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGGACCCAAGATACATTT+TGG 0.198299 4.3:-32278785 MS.gene031839:CDS
TCATGTTCAGATTCTTTCTT+AGG 0.221095 4.3:+32278948 None:intergenic
TGATTTCTATCTTAAGAATA+TGG 0.228122 4.3:-32280685 MS.gene031839:CDS
GCACAACTGAGAAAGGTTTC+TGG 0.285017 4.3:-32280371 MS.gene031839:CDS
AATGACTTGTTGAAACAATA+AGG 0.289381 4.3:+32278971 None:intergenic
GTCTTGTTGTGTGTAGTTAA+AGG 0.331878 4.3:+32279010 None:intergenic
CCGGAAAATCGTGACGTTAT+CGG 0.347516 4.3:-32280331 MS.gene031839:CDS
ACTGAACAAATTACACTTCC+AGG 0.347917 4.3:-32280741 MS.gene031839:CDS
ATAGTCCTTGGCTACAAAAC+TGG 0.348323 4.3:-32278752 MS.gene031839:CDS
TCGGATCCGAAACGCATAAT+CGG 0.363961 4.3:-32280312 MS.gene031839:CDS
AATTGTGAAAGATAATAAAA+AGG 0.367531 4.3:-32278880 MS.gene031839:CDS
CTCAACCCGATTATGCGTTT+CGG 0.375306 4.3:+32280306 None:intergenic
TATATAGGTTTGTCAAAGGT+TGG 0.383447 4.3:-32280459 MS.gene031839:intron
GAAGAAGGTGGGGAAGATGT+AGG 0.386986 4.3:+32279050 None:intergenic
AAGAAGGTGGGGAAGATGTA+GGG 0.391402 4.3:+32279051 None:intergenic
AAACTTCGTTATGATGTCAT+TGG 0.391717 4.3:-32280651 MS.gene031839:CDS
ATATAGGTTTGTCAAAGGTT+GGG 0.396654 4.3:-32280458 MS.gene031839:intron
ACATCTTTGCAATTGCCCTT+AGG 0.396815 4.3:-32278849 MS.gene031839:CDS
CATCTTTGCAATTGCCCTTA+GGG 0.400405 4.3:-32278848 MS.gene031839:CDS
GCTATAGGTAACTGAAGTTC+AGG 0.401665 4.3:+32278813 None:intergenic
GGGCTCAGCTTAATAGTCCT+TGG 0.407233 4.3:-32278764 MS.gene031839:CDS
CAAGAGGAACCAAGACTGAT+TGG 0.409549 4.3:-32280251 MS.gene031839:CDS
CCTTTCTCAGTTGTGCGATT+AGG 0.410304 4.3:+32280378 None:intergenic
CAATCAGTCTTGGTTCCTCT+TGG 0.413050 4.3:+32280252 None:intergenic
GCTGAGCCCAAAATGTATCT+TGG 0.418008 4.3:+32278778 None:intergenic
TATCTTAAGAATATGGTTGT+TGG 0.419156 4.3:-32280678 MS.gene031839:CDS
TTGATTATATATGGCATCAA+TGG 0.441959 4.3:-32280781 None:intergenic
CGGATCCGAAACGCATAATC+GGG 0.449323 4.3:-32280311 MS.gene031839:CDS
TATAGGTTTGTCAAAGGTTG+GGG 0.462857 4.3:-32280457 MS.gene031839:intron
CTGAGCCCAAAATGTATCTT+GGG 0.464405 4.3:+32278779 None:intergenic
AGTTACCTATAGCTGCAGAT+TGG 0.469574 4.3:-32278803 MS.gene031839:CDS
TTAGGCAAGGGGCTATTGTC+AGG 0.479868 4.3:+32280207 None:intergenic
CCTAATCGCACAACTGAGAA+AGG 0.487326 4.3:-32280378 MS.gene031839:CDS
ATTCATAACCCAATCAGTCT+TGG 0.489277 4.3:+32280242 None:intergenic
AGGTACATTGTCCTTCCCTA+AGG 0.489812 4.3:+32278833 None:intergenic
ATGACTTGTTGAAACAATAA+GGG 0.490222 4.3:+32278972 None:intergenic
GTGGGGTGAAATCTGAATCC+TGG 0.490756 4.3:+32280723 None:intergenic
TTCCCCACCTTCTTCCTCTA+CGG 0.492417 4.3:-32279042 MS.gene031839:CDS
AGAAGAAGAGATGAAACAAA+TGG 0.498288 4.3:-32279081 MS.gene031839:CDS
TGGGTCCAATCTGCAGCTAT+AGG 0.498639 4.3:+32278798 None:intergenic
TCAAGGAGTTCTTCTTCTGT+GGG 0.500082 4.3:+32280705 None:intergenic
AAGAGGAACCAAGACTGATT+GGG 0.506930 4.3:-32280250 MS.gene031839:CDS
TATTCTTAAGATAGAAATCA+AGG 0.507383 4.3:+32280688 None:intergenic
CAAAGGTTGGGGAAAGAGAA+TGG 0.507736 4.3:-32280446 MS.gene031839:CDS
ATCAAGGAGTTCTTCTTCTG+TGG 0.511582 4.3:+32280704 None:intergenic
AGGGGCTATTGTCAGGTAAA+CGG 0.514663 4.3:+32280214 None:intergenic
CATGATCCTTGTGACTTGCC+AGG 0.515932 4.3:-32280609 MS.gene031839:intron
AGAAGGTGGGGAAGATGTAG+GGG 0.520080 4.3:+32279052 None:intergenic
TGACAATAGCCCCTTGCCTA+AGG 0.525791 4.3:-32280205 MS.gene031839:intron
ATTATGCAAGATATATAGAA+AGG 0.533180 4.3:-32279141 MS.gene031839:CDS
TTTCTGGAAAGCCACCGGTT+CGG 0.534834 4.3:-32280355 MS.gene031839:CDS
CTGGCAAGTCACAAGGATCA+TGG 0.537753 4.3:+32280610 None:intergenic
AGAAGAGATGAAACAAATGG+TGG 0.549954 4.3:-32279078 MS.gene031839:CDS
TTTGCAATTGCCCTTAGGGA+AGG 0.552390 4.3:-32278844 MS.gene031839:CDS
GGAAAGCCACCGGTTCGGAC+CGG 0.552889 4.3:-32280350 MS.gene031839:CDS
ATATACAATACCTTAGGCAA+GGG 0.556768 4.3:+32280195 None:intergenic
ATGATATATAGGTTTGTCAA+AGG 0.562913 4.3:-32280463 MS.gene031839:intron
TATATACAATACCTTAGGCA+AGG 0.566468 4.3:+32280194 None:intergenic
AAAGGTTTCTGGAAAGCCAC+CGG 0.569247 4.3:-32280360 MS.gene031839:CDS
GGTACATTGTCCTTCCCTAA+GGG 0.570401 4.3:+32278834 None:intergenic
CGAAACGCATAATCGGGTTG+AGG 0.590544 4.3:-32280305 MS.gene031839:CDS
ATTATATATGGCATCAATGG+AGG 0.593615 4.3:-32280778 None:intergenic
AATAATTAAAACTGAAGACA+TGG 0.594981 4.3:-32278925 MS.gene031839:CDS
GTCCGTAGAGGAAGAAGGTG+GGG 0.607988 4.3:+32279040 None:intergenic
GTGTCCGTAGAGGAAGAAGG+TGG 0.609803 4.3:+32279038 None:intergenic
ATAAGGGCATGGACACGTGT+TGG 0.615885 4.3:+32278988 None:intergenic
GAAGAGATGAAACAAATGGT+GGG 0.618089 4.3:-32279077 MS.gene031839:CDS
AATCGGGTTGAGGAAGACGT+TGG 0.622308 4.3:-32280295 MS.gene031839:CDS
ATTGTGTCCGTAGAGGAAGA+AGG 0.636049 4.3:+32279035 None:intergenic
AAAGGAGATTGTGTCCGTAG+AGG 0.637647 4.3:+32279028 None:intergenic
TGTCCGTAGAGGAAGAAGGT+GGG 0.638792 4.3:+32279039 None:intergenic
TTGTTGAAACAATAAGGGCA+TGG 0.638825 4.3:+32278977 None:intergenic
ACTATACCTGGCAAGTCACA+AGG 0.654035 4.3:+32280603 None:intergenic
TATACAATACCTTAGGCAAG+GGG 0.661978 4.3:+32280196 None:intergenic
CAAGGAGTTCTTCTTCTGTG+GGG 0.678001 4.3:+32280706 None:intergenic
TATGAGGGAAGAGCTCCAAG+AGG 0.740807 4.3:-32280267 MS.gene031839:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACTATATATAATTGAATGA+AGG + chr4.3:32279887-32279906 None:intergenic 15.0%
!! AATTGTGAAAGATAATAAAA+AGG - chr4.3:32280613-32280632 MS.gene031839:CDS 15.0%
!! CATTCAATGTAAAAAAAAAT+GGG - chr4.3:32279537-32279556 MS.gene031839:intron 15.0%
!! TCATTCAATGTAAAAAAAAA+TGG - chr4.3:32279536-32279555 MS.gene031839:intron 15.0%
!! TTCAAATTAAATTAATGTCT+AGG + chr4.3:32278961-32278980 None:intergenic 15.0%
!!! TTTTTTTTTACATTGAATGA+AGG + chr4.3:32279536-32279555 None:intergenic 15.0%
!! AAAAATACTAATATATGCCA+TGG - chr4.3:32280307-32280326 MS.gene031839:CDS 20.0%
!! AATAATTAAAACTGAAGACA+TGG - chr4.3:32280568-32280587 MS.gene031839:intron 20.0%
!! AGATATATATACAATACCTT+AGG + chr4.3:32279307-32279326 None:intergenic 20.0%
!! ATTATGCAAGATATATAGAA+AGG - chr4.3:32280352-32280371 MS.gene031839:CDS 20.0%
!! ATTCATAGTTAAAGCTTATA+TGG + chr4.3:32279422-32279441 None:intergenic 20.0%
!! CAAACATAAACTAATGAAAT+TGG - chr4.3:32280252-32280271 MS.gene031839:CDS 20.0%
!! GATATATATCAAAATCACAT+GGG + chr4.3:32279472-32279491 None:intergenic 20.0%
!! TATTCTTAAGATAGAAATCA+AGG + chr4.3:32278808-32278827 None:intergenic 20.0%
!! TGATATATATCAAAATCACA+TGG + chr4.3:32279473-32279492 None:intergenic 20.0%
!! TGATTTCTATCTTAAGAATA+TGG - chr4.3:32278808-32278827 MS.gene031839:CDS 20.0%
!!! TGTGATTTTGATATATATCA+CGG - chr4.3:32279473-32279492 MS.gene031839:intron 20.0%
!!! TGTTTATTTTAGTCACAAAT+TGG - chr4.3:32280014-32280033 MS.gene031839:intron 20.0%
!!! TTTTTACTTTTTTCACAAGA+GGG - chr4.3:32279987-32280006 MS.gene031839:intron 20.0%
!!! TTTTTTACTTTTTTCACAAG+AGG - chr4.3:32279986-32280005 MS.gene031839:intron 20.0%
! AAAAAGATTCCCATGTTATT+TGG + chr4.3:32279971-32279990 None:intergenic 25.0%
! AAAGATAATAAAAAGGCTTG+TGG - chr4.3:32280620-32280639 MS.gene031839:CDS 25.0%
! AATTAGTTGCAAGTCTTAAT+TGG + chr4.3:32280206-32280225 None:intergenic 25.0%
! ACCAAAAATATACTACAGAA+TGG + chr4.3:32279369-32279388 None:intergenic 25.0%
! AGTTAAAGCTTATATGGTTA+TGG + chr4.3:32279416-32279435 None:intergenic 25.0%
! ATGATATATAGGTTTGTCAA+AGG - chr4.3:32279030-32279049 MS.gene031839:CDS 25.0%
! CAATGTAAAAAAAAATGGGA+AGG - chr4.3:32279541-32279560 MS.gene031839:intron 25.0%
! CCAAAAATATACTACAGAAT+GGG + chr4.3:32279368-32279387 None:intergenic 25.0%
! GTAACACATAATATGATACT+AGG + chr4.3:32278931-32278950 None:intergenic 25.0%
! TATCTTAAGAATATGGTTGT+TGG - chr4.3:32278815-32278834 MS.gene031839:CDS 25.0%
!! AAAAGATTCCCATGTTATTT+GGG + chr4.3:32279970-32279989 None:intergenic 25.0%
!! AGCTAGGAGTTAATTTTTAT+AGG - chr4.3:32280040-32280059 MS.gene031839:intron 25.0%
!! GAATGTTTTGCATGATATAT+AGG - chr4.3:32279019-32279038 MS.gene031839:CDS 25.0%
!!! AATGACTTGTTGAAACAATA+AGG + chr4.3:32280525-32280544 None:intergenic 25.0%
!!! ATGACTTGTTGAAACAATAA+GGG + chr4.3:32280524-32280543 None:intergenic 25.0%
!!! GTGATTTTGATATATATCAC+GGG - chr4.3:32279474-32279493 MS.gene031839:intron 25.0%
AAACAAACATGACACTTCAT+AGG - chr4.3:32279845-32279864 MS.gene031839:intron 30.0%
AAACTTCGTTATGATGTCAT+TGG - chr4.3:32278842-32278861 MS.gene031839:CDS 30.0%
AAAGAAACGAAAGGTTCATA+AGG + chr4.3:32280171-32280190 None:intergenic 30.0%
AAATTTCCATGAAGATAGCT+AGG - chr4.3:32280109-32280128 MS.gene031839:intron 30.0%
AAGAAACGAAAGGTTCATAA+GGG + chr4.3:32280170-32280189 None:intergenic 30.0%
AGAAGAAGAGATGAAACAAA+TGG - chr4.3:32280412-32280431 MS.gene031839:CDS 30.0%
ATATACAATACCTTAGGCAA+GGG + chr4.3:32279301-32279320 None:intergenic 30.0%
ATATAGGTTTGTCAAAGGTT+GGG - chr4.3:32279035-32279054 MS.gene031839:CDS 30.0%
TATATACAATACCTTAGGCA+AGG + chr4.3:32279302-32279321 None:intergenic 30.0%
TATATAGGTTTGTCAAAGGT+TGG - chr4.3:32279034-32279053 MS.gene031839:CDS 30.0%
TCAATTAGTCATCGTATGAT+AGG + chr4.3:32279393-32279412 None:intergenic 30.0%
TCATGTTCAGATTCTTTCTT+AGG + chr4.3:32280548-32280567 None:intergenic 30.0%
TTCATCATGAAAGAAACGAA+AGG + chr4.3:32280180-32280199 None:intergenic 30.0%
! ATGATATGCTTGCTTTGTTA+TGG - chr4.3:32279935-32279954 MS.gene031839:intron 30.0%
! CCCATTCTGTAGTATATTTT+TGG - chr4.3:32279365-32279384 MS.gene031839:intron 30.0%
! TTCTTTCTGTACAAGTATTG+TGG - chr4.3:32280142-32280161 MS.gene031839:intron 30.0%
!!! GAAGTGTCATGTTTGTTTTT+TGG + chr4.3:32279843-32279862 None:intergenic 30.0%
ACTGAACAAATTACACTTCC+AGG - chr4.3:32278752-32278771 MS.gene031839:CDS 35.0%
AGAAACGAAAGGTTCATAAG+GGG + chr4.3:32280169-32280188 None:intergenic 35.0%
AGAAGAGATGAAACAAATGG+TGG - chr4.3:32280415-32280434 MS.gene031839:CDS 35.0%
ATTCATAACCCAATCAGTCT+TGG + chr4.3:32279254-32279273 None:intergenic 35.0%
CAGATTCTCCCAAATAACAT+GGG - chr4.3:32279959-32279978 MS.gene031839:intron 35.0%
GAAGAGATGAAACAAATGGT+GGG - chr4.3:32280416-32280435 MS.gene031839:CDS 35.0%
GGAAAATGATCCTAGTAATC+TGG + chr4.3:32279785-32279804 None:intergenic 35.0%
TAACGTGCATATCTCTTACA+TGG - chr4.3:32280081-32280100 MS.gene031839:intron 35.0%
TATACAATACCTTAGGCAAG+GGG + chr4.3:32279300-32279319 None:intergenic 35.0%
TATAGGTTTGTCAAAGGTTG+GGG - chr4.3:32279036-32279055 MS.gene031839:CDS 35.0%
TGATTGATTAGCACTATACC+TGG + chr4.3:32278905-32278924 None:intergenic 35.0%
TGCATATCTCTTACATGGAA+GGG - chr4.3:32280086-32280105 MS.gene031839:intron 35.0%
TTGTTGAAACAATAAGGGCA+TGG + chr4.3:32280519-32280538 None:intergenic 35.0%
TTTCACTTGAAATCGAACTC+AGG + chr4.3:32279722-32279741 None:intergenic 35.0%
! ATTGGACCCAAGATACATTT+TGG - chr4.3:32280708-32280727 MS.gene031839:CDS 35.0%
! GTCTTGTTGTGTGTAGTTAA+AGG + chr4.3:32280486-32280505 None:intergenic 35.0%
! TTGGACCCAAGATACATTTT+GGG - chr4.3:32280709-32280728 MS.gene031839:CDS 35.0%
!!! AAGACGTTGGTTTTCTATGA+GGG - chr4.3:32279211-32279230 MS.gene031839:intron 35.0%
!!! GTTTTTTGGTTTTAACCCTC+TGG + chr4.3:32279829-32279848 None:intergenic 35.0%
AAGAGGAACCAAGACTGATT+GGG - chr4.3:32279243-32279262 MS.gene031839:intron 40.0%
ACATCTTTGCAATTGCCCTT+AGG - chr4.3:32280644-32280663 MS.gene031839:CDS 40.0%
ACCAAGTGATTGAACTCAAG+TGG - chr4.3:32279659-32279678 MS.gene031839:intron 40.0%
ACCACTTGAGTTCAATCACT+TGG + chr4.3:32279663-32279682 None:intergenic 40.0%
AGGGACAAAAAACATGGTAG+TGG - chr4.3:32279085-32279104 MS.gene031839:CDS 40.0%
AGTTACCTATAGCTGCAGAT+TGG - chr4.3:32280690-32280709 MS.gene031839:CDS 40.0%
ATAGTCCTTGGCTACAAAAC+TGG - chr4.3:32280741-32280760 MS.gene031839:CDS 40.0%
ATCAAGGAGTTCTTCTTCTG+TGG + chr4.3:32278792-32278811 None:intergenic 40.0%
CATCTTTGCAATTGCCCTTA+GGG - chr4.3:32280645-32280664 MS.gene031839:CDS 40.0%
CCAGATTCTCCCAAATAACA+TGG - chr4.3:32279958-32279977 MS.gene031839:intron 40.0%
CTACCAAACTCCAGATTACT+AGG - chr4.3:32279772-32279791 MS.gene031839:intron 40.0%
CTCGAACAATTCGTTCTATG+AGG + chr4.3:32279695-32279714 None:intergenic 40.0%
CTGAGCCCAAAATGTATCTT+GGG + chr4.3:32280717-32280736 None:intergenic 40.0%
GCTATAGGTAACTGAAGTTC+AGG + chr4.3:32280683-32280702 None:intergenic 40.0%
GTGCATATCTCTTACATGGA+AGG - chr4.3:32280085-32280104 MS.gene031839:intron 40.0%
TCAAGGAGTTCTTCTTCTGT+GGG + chr4.3:32278791-32278810 None:intergenic 40.0%
TCACTACCTAGCTATCTTCA+TGG + chr4.3:32280118-32280137 None:intergenic 40.0%
! AATGGTATTTTTCCGTGCCA+AGG - chr4.3:32279065-32279084 MS.gene031839:CDS 40.0%
! ATGGTATTTTTCCGTGCCAA+GGG - chr4.3:32279066-32279085 MS.gene031839:CDS 40.0%
! CCATGTTATTTGGGAGAATC+TGG + chr4.3:32279961-32279980 None:intergenic 40.0%
! GATCCTAGTAATCTGGAGTT+TGG + chr4.3:32279778-32279797 None:intergenic 40.0%
! TACTAGGATCATTTTCCCCT+AGG - chr4.3:32279788-32279807 MS.gene031839:intron 40.0%
!! AAAAACATGGTAGTGGAGGA+AGG - chr4.3:32279092-32279111 MS.gene031839:CDS 40.0%
!! AGTCACAAATTGGACTAGCT+AGG - chr4.3:32280024-32280043 MS.gene031839:intron 40.0%
!! GACAAAAAACATGGTAGTGG+AGG - chr4.3:32279088-32279107 MS.gene031839:CDS 40.0%
!!! ATGTTTTTTGTCCCTTGGCA+CGG + chr4.3:32279080-32279099 None:intergenic 40.0%
!!! CTACCATGTTTTTTGTCCCT+TGG + chr4.3:32279085-32279104 None:intergenic 40.0%
!!! GAAGACGTTGGTTTTCTATG+AGG - chr4.3:32279210-32279229 MS.gene031839:intron 40.0%
AAAGGAGATTGTGTCCGTAG+AGG + chr4.3:32280468-32280487 None:intergenic 45.0%
AAGAAGGTGGGGAAGATGTA+GGG + chr4.3:32280445-32280464 None:intergenic 45.0%
ACTATACCTGGCAAGTCACA+AGG + chr4.3:32278893-32278912 None:intergenic 45.0%
AGGGGCTATTGTCAGGTAAA+CGG + chr4.3:32279282-32279301 None:intergenic 45.0%
AGGTACATTGTCCTTCCCTA+AGG + chr4.3:32280663-32280682 None:intergenic 45.0%
ATTGTGTCCGTAGAGGAAGA+AGG + chr4.3:32280461-32280480 None:intergenic 45.0%
CAAAGGTTGGGGAAAGAGAA+TGG - chr4.3:32279047-32279066 MS.gene031839:CDS 45.0%
CAAGAGGAACCAAGACTGAT+TGG - chr4.3:32279242-32279261 MS.gene031839:intron 45.0%
CAAGGAGTTCTTCTTCTGTG+GGG + chr4.3:32278790-32278809 None:intergenic 45.0%
CAATCAGTCTTGGTTCCTCT+TGG + chr4.3:32279244-32279263 None:intergenic 45.0%
CCGGAAAATCGTGACGTTAT+CGG - chr4.3:32279162-32279181 MS.gene031839:intron 45.0%
CCTAATCGCACAACTGAGAA+AGG - chr4.3:32279115-32279134 MS.gene031839:CDS 45.0%
CCTTTCTCAGTTGTGCGATT+AGG + chr4.3:32279118-32279137 None:intergenic 45.0%
CTCAACCCGATTATGCGTTT+CGG + chr4.3:32279190-32279209 None:intergenic 45.0%
GCACAACTGAGAAAGGTTTC+TGG - chr4.3:32279122-32279141 MS.gene031839:CDS 45.0%
GCTGAGCCCAAAATGTATCT+TGG + chr4.3:32280718-32280737 None:intergenic 45.0%
GGTACATTGTCCTTCCCTAA+GGG + chr4.3:32280662-32280681 None:intergenic 45.0%
GTGCCAAGGGACAAAAAACA+TGG - chr4.3:32279079-32279098 MS.gene031839:CDS 45.0%
TCGGATCCGAAACGCATAAT+CGG - chr4.3:32279181-32279200 MS.gene031839:intron 45.0%
TTTGCAATTGCCCTTAGGGA+AGG - chr4.3:32280649-32280668 MS.gene031839:CDS 45.0%
! AAAGGTTTCTGGAAAGCCAC+CGG - chr4.3:32279133-32279152 MS.gene031839:CDS 45.0%
! CCGATAACGTCACGATTTTC+CGG + chr4.3:32279165-32279184 None:intergenic 45.0%
! GATCATTTTCCCCTAGGAAC+CGG - chr4.3:32279794-32279813 MS.gene031839:intron 45.0%
AACCCTCTGGATTACGAGTC+CGG + chr4.3:32279816-32279835 None:intergenic 50.0%
AACCGGACTCGTAATCCAGA+GGG - chr4.3:32279811-32279830 MS.gene031839:intron 50.0%
AGAAGGTGGGGAAGATGTAG+GGG + chr4.3:32280444-32280463 None:intergenic 50.0%
ATTACGAGTCCGGTTCCTAG+GGG + chr4.3:32279806-32279825 None:intergenic 50.0%
CGGATCCGAAACGCATAATC+GGG - chr4.3:32279182-32279201 MS.gene031839:intron 50.0%
CTGGCAAGTCACAAGGATCA+TGG + chr4.3:32278886-32278905 None:intergenic 50.0%
GAAGAAGGTGGGGAAGATGT+AGG + chr4.3:32280446-32280465 None:intergenic 50.0%
GATTACGAGTCCGGTTCCTA+GGG + chr4.3:32279807-32279826 None:intergenic 50.0%
GGGCTCAGCTTAATAGTCCT+TGG - chr4.3:32280729-32280748 MS.gene031839:CDS 50.0%
GTCCTGTCACATACGTACCA+TGG + chr4.3:32280327-32280346 None:intergenic 50.0%
GTGGGGTGAAATCTGAATCC+TGG + chr4.3:32278773-32278792 None:intergenic 50.0%
TATGAGGGAAGAGCTCCAAG+AGG - chr4.3:32279226-32279245 MS.gene031839:intron 50.0%
TGACAATAGCCCCTTGCCTA+AGG - chr4.3:32279288-32279307 MS.gene031839:intron 50.0%
TGCCATGGTACGTATGTGAC+AGG - chr4.3:32280322-32280341 MS.gene031839:CDS 50.0%
TGGGTCCAATCTGCAGCTAT+AGG + chr4.3:32280698-32280717 None:intergenic 50.0%
TGTCCGTAGAGGAAGAAGGT+GGG + chr4.3:32280457-32280476 None:intergenic 50.0%
TTAGGCAAGGGGCTATTGTC+AGG + chr4.3:32279289-32279308 None:intergenic 50.0%
TTCCCCACCTTCTTCCTCTA+CGG - chr4.3:32280451-32280470 MS.gene031839:CDS 50.0%
! ATAAGGGCATGGACACGTGT+TGG + chr4.3:32280508-32280527 None:intergenic 50.0%
! CATGATCCTTGTGACTTGCC+AGG - chr4.3:32278884-32278903 MS.gene031839:CDS 50.0%
! CGAAACGCATAATCGGGTTG+AGG - chr4.3:32279188-32279207 MS.gene031839:intron 50.0%
! TTTCTGGAAAGCCACCGGTT+CGG - chr4.3:32279138-32279157 MS.gene031839:CDS 50.0%
!! AATCGGGTTGAGGAAGACGT+TGG - chr4.3:32279198-32279217 MS.gene031839:intron 50.0%
!! GCACTCCAGTTTTGTAGCCA+AGG + chr4.3:32280749-32280768 None:intergenic 50.0%
GAACCGGACTCGTAATCCAG+AGG - chr4.3:32279810-32279829 MS.gene031839:intron 55.0%
GGATTACGAGTCCGGTTCCT+AGG + chr4.3:32279808-32279827 None:intergenic 55.0%
GTCCGTAGAGGAAGAAGGTG+GGG + chr4.3:32280456-32280475 None:intergenic 55.0%
GTGTCCGTAGAGGAAGAAGG+TGG + chr4.3:32280458-32280477 None:intergenic 55.0%
! CACGATTTTCCGGTCCGAAC+CGG + chr4.3:32279155-32279174 None:intergenic 55.0%
! GATTTTCCGGTCCGAACCGG+TGG + chr4.3:32279152-32279171 None:intergenic 60.0%
!! GGAAAGCCACCGGTTCGGAC+CGG - chr4.3:32279143-32279162 MS.gene031839:CDS 65.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 32278722 32280793 32278722 ID=MS.gene031839
chr4.3 mRNA 32278722 32280793 32278722 ID=MS.gene031839.t1;Parent=MS.gene031839
chr4.3 exon 32280610 32280793 32280610 ID=MS.gene031839.t1.exon1;Parent=MS.gene031839.t1
chr4.3 CDS 32280610 32280793 32280610 ID=cds.MS.gene031839.t1;Parent=MS.gene031839.t1
chr4.3 exon 32280206 32280474 32280206 ID=MS.gene031839.t1.exon2;Parent=MS.gene031839.t1
chr4.3 CDS 32280206 32280474 32280206 ID=cds.MS.gene031839.t1;Parent=MS.gene031839.t1
chr4.3 exon 32278722 32279171 32278722 ID=MS.gene031839.t1.exon3;Parent=MS.gene031839.t1
chr4.3 CDS 32278722 32279171 32278722 ID=cds.MS.gene031839.t1;Parent=MS.gene031839.t1
Gene Sequence

>MS.gene031839

ATGGCATCAATGGAGGACATCAACATGTGTACTGAACAAATTACACTTCCAGGATTCAGATTTCACCCCACAGAAGAAGAACTCCTTGATTTCTATCTTAAGAATATGGTTGTTGGCAAAAAACTTCGTTATGATGTCATTGGTTTTCTAAATATCTATCACCATGATCCTTGTGACTTGCCAGGTATAGTGCTAATCAATCAATTCCTAGTATCATATTATGTGTTACGTATTTTCCTAGACATTAATTTAATTTGAAATTATAGTGACTATTTTGATATATATTAATAAAATTATGAATGTTTTGCATGATATATAGGTTTGTCAAAGGTTGGGGAAAGAGAATGGTATTTTTCCGTGCCAAGGGACAAAAAACATGGTAGTGGAGGAAGGCCTAATCGCACAACTGAGAAAGGTTTCTGGAAAGCCACCGGTTCGGACCGGAAAATCGTGACGTTATCGGATCCGAAACGCATAATCGGGTTGAGGAAGACGTTGGTTTTCTATGAGGGAAGAGCTCCAAGAGGAACCAAGACTGATTGGGTTATGAATGAATACCGTTTACCTGACAATAGCCCCTTGCCTAAGGTATTGTATATATATCTTTCTTCATTTGAATTTGAACTATATAGTCTACATTAGACCCATTCTGTAGTATATTTTTGGTTCCTATCATACGATGACTAATTGACCATAACCATATAAGCTTTAACTATGAATGAATGTGAGTAAAGTTTTAGATTCATGCCCATGTGATTTTGATATATATCACGGGTTTATGTCATTTGATTTACATTGTTCGTTAATTTATCCTTCATTCAATGTAAAAAAAAATGGGAAGGAGAAAATTATTGTTAGTTAAAGTAATATTTTGTAATCATTTTATAATGTACTAGTTATAAACTTAAAATCTTATTACTAAAATCAAAATTCATAAACCAAGTGATTGAACTCAAGTGGTTAATGAGCTCCTCATAGAACGAATTGTTCGAGAAAACCTGAGTTCGATTTCAAGTGAAAACAATTATTAGTCAGACTTTGCTTACATCTCTACCAAACTCCAGATTACTAGGATCATTTTCCCCTAGGAACCGGACTCGTAATCCAGAGGGTTAAAACCAAAAAACAAACATGACACTTCATAGGAAAATAATAATAAGTTCCTTCATTCAATTATATATAGTTCATTGATTTATTCATAATTTCTTACAAGATGATATGCTTGCTTTGTTATGGCCAGATTCTCCCAAATAACATGGGAATCTTTTTTACTTTTTTCACAAGAGGGAATTTGTTTATTTTAGTCACAAATTGGACTAGCTAGGAGTTAATTTTTATAGGTAGAAGTGAATAAATAATTAACGTGCATATCTCTTACATGGAAGGGAAATTTCCATGAAGATAGCTAGGTAGTGACACTTTCTTTCTGTACAAGTATTGTGGTCCCCTTATGAACCTTTCGTTTCTTTCATGATGAAGTTCCAATTAAGACTTGCAACTAATTAAGATTAAATGTCTTCAAATTTCAAGCAAACATAAACTAATGAAATTGGTTTACTATTTCTACTTACAGCAAAAAAAAAAAAAAAATACTAATATATGCCATGGTACGTATGTGACAGGACATAGTATTATGCAAGATATATAGAAAGGCAACTTCGTTGAAAGTGCTTGAACAAAGAGCAGCAGAAGAAGAAGAGATGAAACAAATGGTGGGTTCCCCTACATCTTCCCCACCTTCTTCCTCTACGGACACAATCTCCTTTAACTACACACAACAAGACCAACACGTGTCCATGCCCTTATTGTTTCAACAAGTCATTCCTAAGAAAGAATCTGAACATGAAATAATTAAAACTGAAGACATGGTTTCTTTGTCAAGTCATGAAAAAATTGTGAAAGATAATAAAAAGGCTTGTGGAACATCTTTGCAATTGCCCTTAGGGAAGGACAATGTACCTGAACTTCAGTTACCTATAGCTGCAGATTGGACCCAAGATACATTTTGGGCTCAGCTTAATAGTCCTTGGCTACAAAACTGGAGTGCTTACACTAATATCCTGAATTTTTAA
Protein sequence

>MS.gene031839.t1

MASMEDINMCTEQITLPGFRFHPTEEELLDFYLKNMVVGKKLRYDVIGFLNIYHHDPCDLPGLSKVGEREWYFSVPRDKKHGSGGRPNRTTEKGFWKATGSDRKIVTLSDPKRIIGLRKTLVFYEGRAPRGTKTDWVMNEYRLPDNSPLPKDIVLCKIYRKATSLKVLEQRAAEEEEMKQMVGSPTSSPPSSSTDTISFNYTQQDQHVSMPLLFQQVIPKKESEHEIIKTEDMVSLSSHEKIVKDNKKACGTSLQLPLGKDNVPELQLPIAADWTQDTFWAQLNSPWLQNWSAYTNILNF