Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031921.t1 | XP_003600991.1 | 96.1 | 1247 | 49 | 0 | 24 | 1270 | 21 | 1267 | 0.00E+00 | 2340.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031921.t1 | F4K493 | 48.9 | 1280 | 583 | 26 | 24 | 1269 | 18 | 1260 | 2.1e-310 | 1066.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031921.t1 | G7J2D7 | 96.1 | 1247 | 49 | 0 | 24 | 1270 | 21 | 1267 | 0.0e+00 | 2340.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene031921.t1 | TR | SNF2 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031921.t1 | MTR_3g071860 | 96.391 | 1247 | 45 | 0 | 24 | 1270 | 21 | 1267 | 0.0 | 2481 |
MS.gene031921.t1 | MTR_7g026650 | 79.766 | 855 | 153 | 8 | 416 | 1269 | 317 | 1152 | 0.0 | 1360 |
MS.gene031921.t1 | MTR_7g026650 | 72.555 | 317 | 80 | 2 | 21 | 336 | 8 | 318 | 4.26e-144 | 468 |
MS.gene031921.t1 | MTR_5g083300 | 55.556 | 1323 | 473 | 26 | 24 | 1269 | 19 | 1303 | 0.0 | 1334 |
MS.gene031921.t1 | MTR_5g083300 | 54.944 | 1345 | 491 | 26 | 2 | 1269 | 34 | 1340 | 0.0 | 1334 |
MS.gene031921.t1 | MTR_1g081750 | 72.418 | 881 | 213 | 11 | 391 | 1269 | 263 | 1115 | 0.0 | 1242 |
MS.gene031921.t1 | MTR_1g081750 | 67.100 | 231 | 72 | 2 | 24 | 254 | 21 | 247 | 2.92e-87 | 308 |
MS.gene031921.t1 | MTR_7g026620 | 54.922 | 772 | 184 | 15 | 403 | 1173 | 36 | 644 | 0.0 | 734 |
MS.gene031921.t1 | MTR_7g450860 | 33.822 | 751 | 421 | 19 | 532 | 1256 | 557 | 1257 | 2.62e-110 | 377 |
MS.gene031921.t1 | MTR_7g450820 | 35.083 | 724 | 397 | 18 | 553 | 1250 | 537 | 1213 | 2.68e-110 | 376 |
MS.gene031921.t1 | MTR_7g029525 | 33.607 | 732 | 436 | 17 | 532 | 1250 | 608 | 1302 | 1.81e-107 | 370 |
MS.gene031921.t1 | MTR_7g050445 | 33.035 | 781 | 454 | 19 | 513 | 1270 | 564 | 1298 | 1.07e-104 | 361 |
MS.gene031921.t1 | MTR_7g450790 | 32.918 | 723 | 429 | 16 | 552 | 1258 | 743 | 1425 | 4.17e-102 | 355 |
MS.gene031921.t1 | MTR_4g088650 | 32.785 | 729 | 395 | 16 | 553 | 1258 | 548 | 1204 | 3.11e-98 | 342 |
MS.gene031921.t1 | MTR_7g450780 | 32.245 | 766 | 434 | 22 | 532 | 1260 | 617 | 1334 | 4.15e-97 | 340 |
MS.gene031921.t1 | MTR_7g026550 | 38.127 | 598 | 133 | 14 | 554 | 1150 | 6 | 367 | 1.12e-90 | 298 |
MS.gene031921.t1 | MTR_2g437480 | 31.534 | 704 | 381 | 22 | 534 | 1225 | 387 | 1001 | 5.01e-88 | 309 |
MS.gene031921.t1 | MTR_8g037345 | 30.374 | 721 | 412 | 21 | 511 | 1225 | 216 | 852 | 7.81e-85 | 298 |
MS.gene031921.t1 | MTR_1g080420 | 25.658 | 608 | 364 | 18 | 678 | 1230 | 576 | 1150 | 4.13e-41 | 166 |
MS.gene031921.t1 | MTR_1g080420 | 26.151 | 608 | 361 | 20 | 678 | 1230 | 707 | 1281 | 6.06e-41 | 166 |
MS.gene031921.t1 | MTR_3g071660 | 45.810 | 179 | 45 | 3 | 849 | 1027 | 1 | 127 | 2.46e-34 | 128 |
MS.gene031921.t1 | MTR_8g094070 | 24.613 | 581 | 341 | 19 | 667 | 1217 | 368 | 881 | 1.86e-30 | 131 |
MS.gene031921.t1 | MTR_8g094070 | 24.613 | 581 | 341 | 19 | 667 | 1217 | 368 | 881 | 2.55e-30 | 130 |
MS.gene031921.t1 | MTR_5g020000 | 26.095 | 548 | 316 | 20 | 719 | 1253 | 206 | 677 | 5.26e-26 | 116 |
MS.gene031921.t1 | MTR_7g026590 | 58.947 | 95 | 33 | 2 | 469 | 563 | 11 | 99 | 3.27e-24 | 99.0 |
MS.gene031921.t1 | MTR_4g096930 | 24.505 | 555 | 310 | 20 | 715 | 1244 | 752 | 1222 | 3.89e-24 | 111 |
MS.gene031921.t1 | MTR_7g026610 | 67.606 | 71 | 23 | 0 | 203 | 273 | 13 | 83 | 3.00e-22 | 92.4 |
MS.gene031921.t1 | MTR_3g084600 | 43.307 | 127 | 34 | 2 | 591 | 717 | 16 | 104 | 1.82e-21 | 93.6 |
MS.gene031921.t1 | MTR_4g032945 | 75.472 | 53 | 13 | 0 | 105 | 157 | 1 | 53 | 3.81e-21 | 89.0 |
MS.gene031921.t1 | MTR_3g106210 | 24.217 | 607 | 347 | 21 | 688 | 1259 | 270 | 798 | 3.94e-21 | 101 |
MS.gene031921.t1 | MTR_3g106210 | 23.684 | 608 | 349 | 21 | 688 | 1259 | 270 | 798 | 4.36e-21 | 100 |
MS.gene031921.t1 | MTR_3g106210 | 23.684 | 608 | 349 | 21 | 688 | 1259 | 270 | 798 | 1.22e-20 | 99.4 |
MS.gene031921.t1 | MTR_3g106210 | 23.684 | 608 | 349 | 21 | 688 | 1259 | 270 | 798 | 1.22e-20 | 99.4 |
MS.gene031921.t1 | MTR_7g026600 | 62.295 | 61 | 23 | 0 | 264 | 324 | 4 | 64 | 3.28e-19 | 83.2 |
MS.gene031921.t1 | MTR_3g071670 | 49.505 | 101 | 15 | 2 | 933 | 1033 | 1 | 65 | 3.58e-19 | 83.2 |
MS.gene031921.t1 | MTR_2g084695 | 27.368 | 285 | 154 | 8 | 904 | 1188 | 9 | 240 | 1.04e-18 | 88.6 |
MS.gene031921.t1 | MTR_1g013190 | 24.699 | 498 | 302 | 17 | 719 | 1208 | 308 | 740 | 1.08e-18 | 93.2 |
MS.gene031921.t1 | MTR_5g005840 | 23.455 | 550 | 324 | 17 | 713 | 1252 | 379 | 841 | 3.73e-18 | 91.3 |
MS.gene031921.t1 | MTR_5g004720 | 32.639 | 144 | 93 | 2 | 1122 | 1263 | 585 | 726 | 1.83e-15 | 82.4 |
MS.gene031921.t1 | MTR_1g105050 | 23.091 | 550 | 325 | 17 | 713 | 1251 | 392 | 854 | 1.94e-15 | 82.4 |
MS.gene031921.t1 | MTR_4g078495 | 32.335 | 167 | 100 | 4 | 1080 | 1239 | 530 | 690 | 3.33e-15 | 81.6 |
MS.gene031921.t1 | MTR_4g078460 | 32.335 | 167 | 100 | 4 | 1080 | 1239 | 816 | 976 | 4.47e-15 | 81.3 |
MS.gene031921.t1 | MTR_1g069755 | 31.429 | 140 | 90 | 3 | 1086 | 1225 | 750 | 883 | 5.46e-13 | 74.3 |
MS.gene031921.t1 | MTR_8g038125 | 72.973 | 37 | 10 | 0 | 585 | 621 | 10 | 46 | 3.73e-12 | 62.8 |
MS.gene031921.t1 | MTR_3g053910 | 28.652 | 178 | 118 | 4 | 1038 | 1214 | 856 | 1025 | 7.89e-12 | 70.9 |
MS.gene031921.t1 | MTR_5g090090 | 29.213 | 178 | 117 | 4 | 1038 | 1214 | 902 | 1071 | 8.78e-12 | 70.5 |
MS.gene031921.t1 | MTR_3g053910 | 28.652 | 178 | 118 | 4 | 1038 | 1214 | 885 | 1054 | 9.30e-12 | 70.5 |
MS.gene031921.t1 | MTR_5g090090 | 29.213 | 178 | 117 | 4 | 1038 | 1214 | 902 | 1071 | 9.59e-12 | 70.5 |
MS.gene031921.t1 | MTR_7g090960 | 29.545 | 176 | 116 | 5 | 1052 | 1226 | 1173 | 1341 | 3.18e-11 | 68.9 |
MS.gene031921.t1 | MTR_7g090960 | 32.857 | 140 | 88 | 3 | 1087 | 1226 | 1127 | 1260 | 3.71e-11 | 68.6 |
MS.gene031921.t1 | MTR_7g089190 | 38.298 | 94 | 57 | 1 | 1116 | 1208 | 690 | 783 | 6.21e-11 | 67.4 |
MS.gene031921.t1 | MTR_7g045505 | 22.604 | 407 | 237 | 14 | 861 | 1235 | 126 | 486 | 8.46e-11 | 67.0 |
MS.gene031921.t1 | MTR_3g071695 | 84.848 | 33 | 5 | 0 | 1226 | 1258 | 11 | 43 | 9.48e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031921.t1 | AT5G20420 | 61.519 | 790 | 278 | 12 | 491 | 1269 | 486 | 1260 | 0.0 | 952 |
MS.gene031921.t1 | AT5G20420 | 38.994 | 318 | 150 | 11 | 24 | 324 | 18 | 308 | 2.28e-51 | 199 |
MS.gene031921.t1 | AT3G42670 | 58.452 | 840 | 314 | 14 | 446 | 1269 | 434 | 1254 | 0.0 | 947 |
MS.gene031921.t1 | AT3G42670 | 37.097 | 310 | 174 | 7 | 24 | 330 | 18 | 309 | 3.63e-48 | 189 |
MS.gene031921.t1 | AT3G42670 | 58.452 | 840 | 314 | 14 | 446 | 1269 | 434 | 1254 | 0.0 | 947 |
MS.gene031921.t1 | AT3G42670 | 37.097 | 310 | 174 | 7 | 24 | 330 | 18 | 309 | 3.63e-48 | 189 |
MS.gene031921.t1 | AT3G42670 | 58.452 | 840 | 314 | 14 | 446 | 1269 | 434 | 1254 | 0.0 | 947 |
MS.gene031921.t1 | AT3G42670 | 37.097 | 310 | 174 | 7 | 24 | 330 | 18 | 309 | 3.63e-48 | 189 |
MS.gene031921.t1 | AT3G42670 | 58.314 | 842 | 314 | 14 | 446 | 1269 | 434 | 1256 | 0.0 | 947 |
MS.gene031921.t1 | AT3G42670 | 37.097 | 310 | 174 | 7 | 24 | 330 | 18 | 309 | 3.77e-48 | 188 |
MS.gene031921.t1 | AT3G24340 | 32.852 | 761 | 420 | 21 | 513 | 1258 | 430 | 1114 | 6.45e-106 | 362 |
MS.gene031921.t1 | AT1G05490 | 32.285 | 731 | 429 | 19 | 551 | 1254 | 693 | 1384 | 2.37e-101 | 353 |
MS.gene031921.t1 | AT2G21450 | 30.629 | 715 | 402 | 21 | 533 | 1225 | 40 | 682 | 1.32e-81 | 284 |
MS.gene031921.t1 | AT2G21450 | 31.402 | 656 | 368 | 19 | 587 | 1225 | 183 | 773 | 4.80e-81 | 285 |
MS.gene031921.t1 | AT2G21450 | 31.402 | 656 | 368 | 19 | 587 | 1225 | 190 | 780 | 5.84e-81 | 284 |
MS.gene031921.t1 | AT2G16390 | 30.184 | 762 | 423 | 23 | 482 | 1225 | 180 | 850 | 6.56e-80 | 283 |
MS.gene031921.t1 | AT2G16390 | 30.184 | 762 | 423 | 23 | 482 | 1225 | 177 | 847 | 7.49e-80 | 283 |
MS.gene031921.t1 | AT5G63950 | 25.521 | 576 | 327 | 23 | 674 | 1217 | 367 | 872 | 2.33e-28 | 124 |
MS.gene031921.t1 | AT5G63950 | 26.003 | 573 | 311 | 24 | 674 | 1217 | 367 | 855 | 1.10e-27 | 122 |
MS.gene031921.t1 | AT3G19210 | 22.074 | 598 | 361 | 21 | 684 | 1249 | 180 | 704 | 1.87e-27 | 121 |
MS.gene031921.t1 | AT3G19210 | 22.500 | 600 | 358 | 21 | 684 | 1249 | 180 | 706 | 5.52e-27 | 119 |
MS.gene031921.t1 | AT3G19210 | 22.500 | 600 | 358 | 22 | 684 | 1249 | 180 | 706 | 7.14e-27 | 119 |
MS.gene031921.t1 | AT1G08600 | 28.333 | 240 | 133 | 7 | 683 | 914 | 718 | 926 | 7.71e-23 | 106 |
MS.gene031921.t1 | AT1G08600 | 34.969 | 163 | 94 | 4 | 1077 | 1230 | 1123 | 1282 | 1.14e-17 | 90.1 |
MS.gene031921.t1 | AT1G08600 | 28.333 | 240 | 133 | 7 | 683 | 914 | 718 | 926 | 7.71e-23 | 106 |
MS.gene031921.t1 | AT1G08600 | 34.969 | 163 | 94 | 4 | 1077 | 1230 | 1123 | 1282 | 1.14e-17 | 90.1 |
MS.gene031921.t1 | AT1G08600 | 28.333 | 240 | 133 | 7 | 683 | 914 | 718 | 926 | 7.71e-23 | 106 |
MS.gene031921.t1 | AT1G08600 | 34.969 | 163 | 94 | 4 | 1077 | 1230 | 1123 | 1282 | 1.14e-17 | 90.1 |
MS.gene031921.t1 | AT5G44800 | 25.946 | 555 | 306 | 24 | 715 | 1252 | 707 | 1173 | 1.86e-22 | 105 |
MS.gene031921.t1 | AT4G31900 | 23.218 | 547 | 304 | 17 | 674 | 1208 | 214 | 656 | 5.57e-19 | 94.0 |
MS.gene031921.t1 | AT4G31900 | 22.669 | 547 | 307 | 16 | 674 | 1208 | 173 | 615 | 5.58e-19 | 94.0 |
MS.gene031921.t1 | AT4G31900 | 23.218 | 547 | 304 | 17 | 674 | 1208 | 214 | 656 | 6.79e-19 | 94.0 |
MS.gene031921.t1 | AT1G08600 | 34.969 | 163 | 94 | 4 | 1077 | 1230 | 1102 | 1261 | 1.18e-17 | 89.7 |
MS.gene031921.t1 | AT2G25170 | 23.658 | 503 | 303 | 20 | 718 | 1208 | 294 | 727 | 3.30e-17 | 88.6 |
MS.gene031921.t1 | AT2G25170 | 23.658 | 503 | 303 | 20 | 718 | 1208 | 294 | 727 | 3.30e-17 | 88.6 |
MS.gene031921.t1 | AT2G25170 | 23.658 | 503 | 303 | 20 | 718 | 1208 | 311 | 744 | 3.32e-17 | 88.6 |
MS.gene031921.t1 | AT2G25170 | 23.658 | 503 | 303 | 20 | 718 | 1208 | 320 | 753 | 4.11e-17 | 88.2 |
MS.gene031921.t1 | AT3G06010 | 23.689 | 553 | 320 | 19 | 713 | 1252 | 419 | 882 | 1.08e-16 | 86.7 |
MS.gene031921.t1 | AT1G03750 | 30.939 | 181 | 111 | 5 | 1067 | 1239 | 523 | 697 | 5.50e-16 | 84.0 |
MS.gene031921.t1 | AT5G66750 | 34.091 | 176 | 109 | 4 | 1087 | 1261 | 540 | 709 | 1.19e-15 | 82.8 |
MS.gene031921.t1 | AT5G19310 | 22.847 | 569 | 314 | 19 | 713 | 1257 | 138 | 605 | 1.08e-14 | 79.7 |
MS.gene031921.t1 | AT5G19310 | 22.847 | 569 | 314 | 19 | 713 | 1257 | 402 | 869 | 1.68e-14 | 79.3 |
MS.gene031921.t1 | AT2G44980 | 25.676 | 370 | 229 | 14 | 861 | 1221 | 181 | 513 | 8.16e-14 | 77.0 |
MS.gene031921.t1 | AT2G44980 | 23.810 | 588 | 345 | 24 | 675 | 1231 | 26 | 541 | 2.93e-12 | 72.0 |
MS.gene031921.t1 | AT3G57300 | 32.414 | 145 | 92 | 3 | 1087 | 1231 | 1222 | 1360 | 2.96e-12 | 72.0 |
MS.gene031921.t1 | AT3G57300 | 32.414 | 145 | 92 | 3 | 1087 | 1231 | 1222 | 1360 | 2.96e-12 | 72.0 |
MS.gene031921.t1 | AT2G28290 | 39.623 | 106 | 63 | 1 | 1103 | 1208 | 1101 | 1205 | 3.33e-12 | 72.4 |
MS.gene031921.t1 | AT2G28290 | 39.623 | 106 | 63 | 1 | 1103 | 1208 | 1102 | 1206 | 3.39e-12 | 72.0 |
MS.gene031921.t1 | AT2G28290 | 39.623 | 106 | 63 | 1 | 1103 | 1208 | 1101 | 1205 | 3.59e-12 | 72.0 |
MS.gene031921.t1 | AT2G28290 | 39.623 | 106 | 63 | 1 | 1103 | 1208 | 1101 | 1205 | 3.59e-12 | 72.0 |
MS.gene031921.t1 | AT2G28290 | 39.623 | 106 | 63 | 1 | 1103 | 1208 | 1102 | 1206 | 3.59e-12 | 72.0 |
MS.gene031921.t1 | AT2G28290 | 39.623 | 106 | 63 | 1 | 1103 | 1208 | 1101 | 1205 | 3.62e-12 | 72.0 |
MS.gene031921.t1 | AT3G57300 | 32.414 | 145 | 92 | 3 | 1087 | 1231 | 1255 | 1393 | 3.65e-12 | 72.0 |
MS.gene031921.t1 | AT2G18760 | 29.412 | 153 | 97 | 4 | 1078 | 1225 | 729 | 875 | 4.01e-12 | 71.6 |
MS.gene031921.t1 | AT2G18760 | 29.412 | 153 | 97 | 4 | 1078 | 1225 | 729 | 875 | 4.01e-12 | 71.6 |
MS.gene031921.t1 | AT2G18760 | 29.412 | 153 | 97 | 4 | 1078 | 1225 | 729 | 875 | 4.01e-12 | 71.6 |
MS.gene031921.t1 | AT2G18760 | 29.412 | 153 | 97 | 4 | 1078 | 1225 | 729 | 875 | 4.01e-12 | 71.6 |
MS.gene031921.t1 | AT2G18760 | 29.412 | 153 | 97 | 4 | 1078 | 1225 | 729 | 875 | 4.01e-12 | 71.6 |
MS.gene031921.t1 | AT2G18760 | 29.412 | 153 | 97 | 4 | 1078 | 1225 | 729 | 875 | 4.01e-12 | 71.6 |
MS.gene031921.t1 | AT2G18760 | 29.412 | 153 | 97 | 4 | 1078 | 1225 | 788 | 934 | 4.22e-12 | 71.6 |
MS.gene031921.t1 | AT2G44980 | 24.248 | 532 | 309 | 22 | 725 | 1231 | 80 | 542 | 5.23e-12 | 71.2 |
MS.gene031921.t1 | AT2G13370 | 33.846 | 130 | 79 | 2 | 1089 | 1217 | 957 | 1080 | 1.41e-11 | 70.1 |
MS.gene031921.t1 | AT2G13370 | 33.846 | 130 | 79 | 2 | 1089 | 1217 | 957 | 1080 | 1.41e-11 | 70.1 |
MS.gene031921.t1 | AT2G13370 | 33.846 | 130 | 79 | 2 | 1089 | 1217 | 957 | 1080 | 1.41e-11 | 70.1 |
MS.gene031921.t1 | AT5G05130 | 34.959 | 123 | 74 | 3 | 1087 | 1208 | 725 | 842 | 3.05e-11 | 68.6 |
Find 181 sgRNAs with CRISPR-Local
Find 366 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACATTGTTTCAGAACAATTT+TGG | 0.187519 | 3.4:-70951910 | MS.gene031921:CDS |
ATTAGTCAAATAATGATATT+TGG | 0.190711 | 3.4:+70954059 | None:intergenic |
TGACGGTGATGGCAAGTTTA+AGG | 0.211148 | 3.4:-70954106 | MS.gene031921:CDS |
CCTCTGAAATTAAGCCTTAT+AGG | 0.223041 | 3.4:-70954677 | MS.gene031921:CDS |
TATAGATTGGATGAAGAAAT+TGG | 0.225183 | 3.4:-70953146 | MS.gene031921:CDS |
AACAAGCATGTTGGAGAAAA+AGG | 0.240380 | 3.4:-70953635 | MS.gene031921:CDS |
TCATCACTTGATATTGTTGT+AGG | 0.263435 | 3.4:+70953976 | None:intergenic |
AACCTTGATTTAGTGCTTCT+AGG | 0.271299 | 3.4:+70951985 | None:intergenic |
ACTATCCTTGGATTCTTTCT+TGG | 0.272245 | 3.4:+70953181 | None:intergenic |
CATATAAGTTGTTCTCTTGT+AGG | 0.274870 | 3.4:+70954245 | None:intergenic |
TTATAATCTTCATCAACTTT+TGG | 0.276698 | 3.4:+70952657 | None:intergenic |
TAGTGATGTCAAACATGTTT+TGG | 0.279882 | 3.4:-70952181 | MS.gene031921:CDS |
GCATAACATTGCTGGCTCTA+TGG | 0.281856 | 3.4:-70952499 | MS.gene031921:CDS |
ACTATCTATTATTTCCTTGC+AGG | 0.289125 | 3.4:+70953723 | None:intergenic |
GCAAAATGGCAAAGAGATTA+TGG | 0.292136 | 3.4:-70951248 | MS.gene031921:CDS |
ACATCAAGTTATCTTCTTGA+TGG | 0.297384 | 3.4:-70953526 | MS.gene031921:CDS |
CAGAAGAGGATGGTGGTAAG+AGG | 0.300780 | 3.4:-70954194 | MS.gene031921:CDS |
CTTACTGGAATAGACGTAAA+TGG | 0.306756 | 3.4:+70955430 | None:intergenic |
TCGACCGGGCCAGCAGAAAA+TGG | 0.318508 | 3.4:-70951026 | MS.gene031921:CDS |
GGAAGAAAATCCTGATGATT+TGG | 0.323484 | 3.4:-70953581 | MS.gene031921:CDS |
TTCTCTGCTTGCCATTTAGA+AGG | 0.325243 | 3.4:+70950890 | None:intergenic |
CAAGATTGTGTATCAAGTTA+TGG | 0.325678 | 3.4:-70954520 | MS.gene031921:CDS |
TGGTGCTGATGTGTTGAATT+TGG | 0.328233 | 3.4:-70954013 | MS.gene031921:CDS |
GCAAAATCAATGATTCTTCC+TGG | 0.333207 | 3.4:-70952219 | MS.gene031921:CDS |
ATTGATATATCTATGCTATT+AGG | 0.336391 | 3.4:-70955478 | MS.gene031921:CDS |
AGAACTTCATGAATAAATTT+CGG | 0.338011 | 3.4:+70951856 | None:intergenic |
GCTGTCGTCGAACTTGAACC+TGG | 0.338982 | 3.4:+70952240 | None:intergenic |
ACTTCATGTTGTGGATGATA+TGG | 0.339055 | 3.4:-70953884 | MS.gene031921:CDS |
TCTGATGAATCCCACCTATA+AGG | 0.345661 | 3.4:+70954663 | None:intergenic |
CTCAACCTCAAGAGGGTAAC+TGG | 0.345817 | 3.4:+70951522 | None:intergenic |
AGGGCTTTCTCTCAATGCTT+TGG | 0.345836 | 3.4:+70952038 | None:intergenic |
AATTCTTCTGAGACTCTTCC+TGG | 0.348075 | 3.4:-70951631 | MS.gene031921:CDS |
AGCAAATTTGATTTGAGAAA+AGG | 0.352698 | 3.4:-70951397 | MS.gene031921:CDS |
GCACTTTGTCATCAGATATT+CGG | 0.354010 | 3.4:-70955555 | MS.gene031921:CDS |
TCAACTTCATGTGATGGCTT+TGG | 0.355507 | 3.4:+70954363 | None:intergenic |
TTAATGAAATCGACAACGTT+TGG | 0.355745 | 3.4:-70952587 | MS.gene031921:CDS |
AAGTATTATGTTGAAGCCTT+TGG | 0.358364 | 3.4:+70954727 | None:intergenic |
ACAGAAACTTCAGAAGAAAA+TGG | 0.360997 | 3.4:-70951554 | MS.gene031921:CDS |
TCATTAATCAATGGTTCATC+AGG | 0.361796 | 3.4:+70952603 | None:intergenic |
TTGTGGAAGATCCTTCTAAA+TGG | 0.362063 | 3.4:-70950901 | MS.gene031921:CDS |
TTTCTTTGGCATAACATTGC+TGG | 0.370580 | 3.4:-70952507 | MS.gene031921:CDS |
GAAATGTATCCCTTCCCATT+TGG | 0.379249 | 3.4:+70953852 | None:intergenic |
ACAGTGCAGTGAAGAAAATA+AGG | 0.381838 | 3.4:-70952694 | MS.gene031921:CDS |
AAGATTGTGTATCAAGTTAT+GGG | 0.381846 | 3.4:-70954519 | MS.gene031921:CDS |
GATAGGTGGAATGCCCAAAA+AGG | 0.388041 | 3.4:-70952731 | MS.gene031921:intron |
TCATGCAACGCGAGAGTCTT+CGG | 0.398445 | 3.4:+70956641 | None:intergenic |
TCATCAAGTATCAAGATTCC+AGG | 0.400291 | 3.4:+70952018 | None:intergenic |
TAATGAAATCGACAACGTTT+GGG | 0.400568 | 3.4:-70952586 | MS.gene031921:CDS |
GCTCAGAACAAATCTTACTT+TGG | 0.411413 | 3.4:+70951372 | None:intergenic |
AAAGAGATTATGGTACTAAC+AGG | 0.411733 | 3.4:-70951238 | MS.gene031921:CDS |
CACAATCTAGATTACTCGTT+GGG | 0.425426 | 3.4:-70954623 | MS.gene031921:CDS |
AGTAATATTCTCAATTCTGT+TGG | 0.426455 | 3.4:+70951940 | None:intergenic |
AGCATAGATATATCAATTCC+AGG | 0.429264 | 3.4:+70955484 | None:intergenic |
GCATTTGAAGCAGTATTGAA+TGG | 0.430979 | 3.4:-70955658 | MS.gene031921:CDS |
ATCATGTTCACAACTATCCT+TGG | 0.438359 | 3.4:+70953169 | None:intergenic |
AGGACCAGAGGTCGTTTCCT+TGG | 0.438685 | 3.4:+70952357 | None:intergenic |
ATATAAGTTGTTCTCTTGTA+GGG | 0.439124 | 3.4:+70954246 | None:intergenic |
ATTTCTTGTGCAAAGAAGAA+TGG | 0.444673 | 3.4:-70954033 | MS.gene031921:CDS |
TTGTCGATTTCATTAATCAA+TGG | 0.444704 | 3.4:+70952594 | None:intergenic |
TGATGATTTGGATGCCTTGT+GGG | 0.445174 | 3.4:-70953569 | MS.gene031921:CDS |
ATACTGATATTATTAGTCCT+TGG | 0.448089 | 3.4:-70954491 | MS.gene031921:CDS |
TCAAGTGATGAAGAAGTTGA+TGG | 0.452513 | 3.4:-70953964 | MS.gene031921:CDS |
TCATGAACATGACTTCTGTT+AGG | 0.453019 | 3.4:+70953787 | None:intergenic |
GTCGTACACATCAATAAAAC+CGG | 0.453824 | 3.4:+70951660 | None:intergenic |
TTGACATCACTAGAAGGTCT+TGG | 0.457036 | 3.4:+70952192 | None:intergenic |
CACAAGGCATCCAAATCATC+AGG | 0.457690 | 3.4:+70953571 | None:intergenic |
AAGAAAAGAATTGATGAGAA+AGG | 0.461369 | 3.4:+70952401 | None:intergenic |
GTTAACTTATATGATGATCA+AGG | 0.462568 | 3.4:-70954822 | MS.gene031921:CDS |
CATGATTATGAAGAATGAAA+AGG | 0.465758 | 3.4:-70950810 | MS.gene031921:CDS |
ATATCACATGCCCCTGGAGC+AGG | 0.466821 | 3.4:-70952429 | MS.gene031921:CDS |
ATCAAAAGCTCAACCTCAAG+AGG | 0.468504 | 3.4:+70951514 | None:intergenic |
CATGAAGAACTAGATCATAA+AGG | 0.470683 | 3.4:-70953769 | MS.gene031921:CDS |
ACATCAAATTGAGAAACAAT+AGG | 0.472158 | 3.4:+70954423 | None:intergenic |
TCTTTAAAGAGAAGATAAAG+AGG | 0.473356 | 3.4:-70953912 | MS.gene031921:CDS |
GATTGAAGATGATATACTTA+GGG | 0.473462 | 3.4:-70950867 | MS.gene031921:CDS |
CTGTCGTCGAACTTGAACCT+GGG | 0.474123 | 3.4:+70952241 | None:intergenic |
AGATTGAAGATGATATACTT+AGG | 0.475140 | 3.4:-70950868 | MS.gene031921:CDS |
ACACAACCTACGTAACGTTC+AGG | 0.477670 | 3.4:+70954306 | None:intergenic |
CTAGAAGGTCTTGGAAATCC+AGG | 0.479150 | 3.4:+70952201 | None:intergenic |
ACACCCTAGTGTTCTTGTCA+TGG | 0.484111 | 3.4:-70952127 | MS.gene031921:CDS |
ATTTCCAAGGAAACGACCTC+TGG | 0.484818 | 3.4:-70952361 | MS.gene031921:CDS |
TGGTGGTAAGAGGGATCAAA+AGG | 0.487310 | 3.4:-70954184 | MS.gene031921:CDS |
CTGGGGAGGTTCGACGGCCA+TGG | 0.487953 | 3.4:+70952259 | None:intergenic |
CACCCTAGTGTTCTTGTCAT+GGG | 0.490664 | 3.4:-70952126 | MS.gene031921:CDS |
GTGCCGGTTTATCTTATCCA+TGG | 0.492001 | 3.4:-70952276 | MS.gene031921:CDS |
ACAGTAGGCTCTTCTTCAGT+TGG | 0.493427 | 3.4:+70953676 | None:intergenic |
AACACAACCACCACTTGAGT+TGG | 0.495316 | 3.4:+70952452 | None:intergenic |
GAGCTAGACTTGTTTGAAAG+AGG | 0.495712 | 3.4:-70951214 | MS.gene031921:CDS |
TATTATGTTGAAGCCTTTGG+AGG | 0.500254 | 3.4:+70954730 | None:intergenic |
GTTACTTGAAGTTATTTCCA+AGG | 0.501704 | 3.4:-70952374 | MS.gene031921:CDS |
AAGCAGTATTGAATGGATCA+TGG | 0.507736 | 3.4:-70955651 | MS.gene031921:CDS |
AAAATGGAAGATTCCTGTGC+CGG | 0.511195 | 3.4:-70952292 | MS.gene031921:CDS |
TATTGATGAGGAGAAGATGC+AGG | 0.512826 | 3.4:-70951710 | MS.gene031921:CDS |
AAGCCATCACATGAAGTTGA+AGG | 0.513509 | 3.4:-70954360 | MS.gene031921:CDS |
CAGATATTCGGATAAGATCA+AGG | 0.513601 | 3.4:-70955543 | MS.gene031921:CDS |
TTCAGTATCAATGAAACGTA+AGG | 0.514290 | 3.4:+70955588 | None:intergenic |
ACTTCATGTGATGGCTTTGG+TGG | 0.514522 | 3.4:+70954366 | None:intergenic |
CTTCAACATAATACTTGTGA+AGG | 0.515406 | 3.4:-70954720 | MS.gene031921:CDS |
TCAATCAATGCTTGTGCTGA+AGG | 0.515842 | 3.4:-70951136 | MS.gene031921:CDS |
GAAGAACTACTTGGAAAGAG+TGG | 0.517977 | 3.4:-70950952 | MS.gene031921:CDS |
AGGTTGTGTTGTTGAGAAGT+TGG | 0.518892 | 3.4:-70954292 | MS.gene031921:CDS |
CGGCCATGGATAAGATAAAC+CGG | 0.521874 | 3.4:+70952273 | None:intergenic |
TTCACAACATTTATAAGCCA+AGG | 0.522728 | 3.4:+70954474 | None:intergenic |
AACTCTATTAAGAATCTCAC+AGG | 0.523720 | 3.4:+70951292 | None:intergenic |
CATGGCCGTCGAACCTCCCC+AGG | 0.526398 | 3.4:-70952258 | MS.gene031921:CDS |
GTTACTGACGACCGGGTCGA+TGG | 0.527013 | 3.4:-70950990 | MS.gene031921:CDS |
CCATGGATGTATTGATCCGA+GGG | 0.527482 | 3.4:+70951489 | None:intergenic |
GTGTATCAGTTACTGACGAC+CGG | 0.528339 | 3.4:-70950998 | MS.gene031921:CDS |
ACATGTTTGACATCACTAGA+AGG | 0.528845 | 3.4:+70952186 | None:intergenic |
AAGCCTTCAACTTCATGTGA+TGG | 0.530172 | 3.4:+70954357 | None:intergenic |
TTGTGAACATGATTATAGAT+TGG | 0.534056 | 3.4:-70953159 | MS.gene031921:CDS |
AGCCTACTGTAAATGAGAAG+TGG | 0.536085 | 3.4:-70953663 | MS.gene031921:CDS |
TTCCACTTCTCATTTACAGT+AGG | 0.536954 | 3.4:+70953661 | None:intergenic |
AGATGATATACTTAGGGAGA+TGG | 0.537029 | 3.4:-70950861 | MS.gene031921:CDS |
GTTGTTGAGAAGTTGGAAGT+TGG | 0.537957 | 3.4:-70954285 | MS.gene031921:CDS |
CTCTTCTTCAGATTCAGAAG+AGG | 0.540428 | 3.4:-70954208 | MS.gene031921:CDS |
ATCCTAGAAGCACTAAATCA+AGG | 0.543534 | 3.4:-70951987 | MS.gene031921:CDS |
AGCTAGACTTGTTTGAAAGA+GGG | 0.545005 | 3.4:-70951213 | MS.gene031921:CDS |
AAATTGACATGAACATTGAT+CGG | 0.547067 | 3.4:+70954848 | None:intergenic |
GGAATCTTGATACTTGATGA+AGG | 0.550715 | 3.4:-70952015 | MS.gene031921:CDS |
CTCTATGGAACCATCACTCA+TGG | 0.552151 | 3.4:-70952484 | MS.gene031921:CDS |
TACAATCTCATGTTGTTCAT+CGG | 0.552573 | 3.4:+70951576 | None:intergenic |
TTGAACCTGGGGAGGTTCGA+CGG | 0.553335 | 3.4:+70952253 | None:intergenic |
TCTTCAGATTCAGAAGAGGA+TGG | 0.556076 | 3.4:-70954204 | MS.gene031921:CDS |
TGGATAAGATAAACCGGCAC+AGG | 0.556571 | 3.4:+70952279 | None:intergenic |
AATGTATATATTTGTAAACC+AGG | 0.562154 | 3.4:+70951613 | None:intergenic |
ATAAGTATAGAAGAACTACT+TGG | 0.563508 | 3.4:-70950961 | MS.gene031921:CDS |
ACCATGGATGTATTGATCCG+AGG | 0.564240 | 3.4:+70951488 | None:intergenic |
CCCTCGGATCAATACATCCA+TGG | 0.564663 | 3.4:-70951489 | MS.gene031921:CDS |
AAGAACTACTTGGAAAGAGT+GGG | 0.567137 | 3.4:-70950951 | MS.gene031921:CDS |
ATTCAATGCTGATGCCTGCA+AGG | 0.569248 | 3.4:-70953737 | MS.gene031921:CDS |
TATGATGATCAAGGTTCACT+TGG | 0.572239 | 3.4:-70954813 | MS.gene031921:CDS |
AGAAGAGGATGGTGGTAAGA+GGG | 0.572455 | 3.4:-70954193 | MS.gene031921:CDS |
TGAAATTAAGCCTTATAGGT+GGG | 0.572501 | 3.4:-70954673 | MS.gene031921:CDS |
CCTATAAGGCTTAATTTCAG+AGG | 0.573942 | 3.4:+70954677 | None:intergenic |
GATTCTAAATACAGAAGGAA+AGG | 0.574058 | 3.4:-70951823 | MS.gene031921:CDS |
TTTATTGATGTGTACGACAG+TGG | 0.574824 | 3.4:-70951655 | MS.gene031921:CDS |
CATCAAGTATCAAGATTCCA+GGG | 0.577717 | 3.4:+70952019 | None:intergenic |
GAGTACCAGTTACCCTCTTG+AGG | 0.579454 | 3.4:-70951527 | MS.gene031921:CDS |
TCACAATCTAGATTACTCGT+TGG | 0.580048 | 3.4:-70954624 | MS.gene031921:CDS |
TGTGTTATATCACATGCCCC+TGG | 0.582668 | 3.4:-70952435 | MS.gene031921:CDS |
ACTTAGGGAGATGGTTGAAG+AGG | 0.582988 | 3.4:-70950852 | MS.gene031921:CDS |
CGTCGAACTTGAACCTGGGG+AGG | 0.583803 | 3.4:+70952245 | None:intergenic |
GCTTGCGACGTTCGAAACGT+AGG | 0.587148 | 3.4:-70954338 | MS.gene031921:CDS |
GAAGCACTAAATCAAGGTTG+AGG | 0.587727 | 3.4:-70951981 | MS.gene031921:CDS |
GTGGAAGGAAACAAGCATGT+TGG | 0.588239 | 3.4:-70953644 | MS.gene031921:CDS |
ATTGTTCTGAAACAATGTGC+CGG | 0.589502 | 3.4:+70951915 | None:intergenic |
TGATACCAAGAAAGAATCCA+AGG | 0.593538 | 3.4:-70953186 | MS.gene031921:CDS |
TAGCCCATGACAAGAACACT+AGG | 0.596138 | 3.4:+70952123 | None:intergenic |
CTGAAATTAAGCCTTATAGG+TGG | 0.602209 | 3.4:-70954674 | MS.gene031921:CDS |
CTTATCTTCTTCCATCGACC+CGG | 0.602308 | 3.4:+70950979 | None:intergenic |
AGCATCGAAAAGCGATGACG+AGG | 0.602778 | 3.4:-70953602 | MS.gene031921:CDS |
TACTGTAAATGAGAAGTGGA+AGG | 0.605920 | 3.4:-70953659 | MS.gene031921:CDS |
AGTTAGATTCTAAATACAGA+AGG | 0.607419 | 3.4:-70951828 | MS.gene031921:CDS |
AAAGCATTGAGAGAAAGCCC+TGG | 0.610887 | 3.4:-70952036 | MS.gene031921:CDS |
ATTCGCACACAGAAAATACA+TGG | 0.611483 | 3.4:-70952061 | MS.gene031921:CDS |
GAAAGAACGTCATTTGCTTG+AGG | 0.612060 | 3.4:-70951785 | MS.gene031921:CDS |
CTGATGATTTGGATGCCTTG+TGG | 0.612273 | 3.4:-70953570 | MS.gene031921:CDS |
GGAATATACTGTCTTCGATG+TGG | 0.617949 | 3.4:-70953125 | MS.gene031921:CDS |
TGTATTCATTTCTTCCCACA+AGG | 0.620617 | 3.4:+70953555 | None:intergenic |
GAATTGAGAATATTACTCTC+CGG | 0.621894 | 3.4:-70951934 | MS.gene031921:CDS |
GAGGAAGAGACTTCATGTTG+TGG | 0.623646 | 3.4:-70953893 | MS.gene031921:CDS |
TCTAAATACAGAAGGAAAGG+CGG | 0.627794 | 3.4:-70951820 | MS.gene031921:CDS |
TCAAGGTTCACTTGGTACAG+AGG | 0.634309 | 3.4:-70954805 | MS.gene031921:CDS |
GATGTGTTGAATTTGGAGTA+CGG | 0.641704 | 3.4:-70954006 | MS.gene031921:CDS |
TGTCGTCGAACTTGAACCTG+GGG | 0.645719 | 3.4:+70952242 | None:intergenic |
AATTAACTCAGATATTGATG+AGG | 0.647649 | 3.4:-70951722 | MS.gene031921:CDS |
AAATTTGAAGATCAAAGCAG+CGG | 0.654526 | 3.4:-70951178 | MS.gene031921:CDS |
ATTGATGAGGAGAAGATGCA+GGG | 0.655538 | 3.4:-70951709 | MS.gene031921:CDS |
TGTATCAGTTACTGACGACC+GGG | 0.657785 | 3.4:-70950997 | MS.gene031921:CDS |
GAATGGATCATGGCAACCTG+TGG | 0.660516 | 3.4:-70955641 | MS.gene031921:CDS |
GTCTTGGCAAGATACAGAAG+TGG | 0.663388 | 3.4:-70952155 | MS.gene031921:CDS |
TCAAAAGCTCAACCTCAAGA+GGG | 0.663408 | 3.4:+70951515 | None:intergenic |
TCAGATTCAGAAGAGGATGG+TGG | 0.664458 | 3.4:-70954201 | MS.gene031921:CDS |
AGATTGTGTATCAAGTTATG+GGG | 0.667010 | 3.4:-70954518 | MS.gene031921:CDS |
TTATCTTCTTGATGGAACTG+CGG | 0.671963 | 3.4:-70953518 | MS.gene031921:intron |
AAGCTATTAATGTGAACACA+AGG | 0.677127 | 3.4:-70954140 | MS.gene031921:CDS |
GAACATTGATCGGATTTGTG+AGG | 0.698234 | 3.4:+70954858 | None:intergenic |
AGCCCATGACAAGAACACTA+GGG | 0.709112 | 3.4:+70952124 | None:intergenic |
GTACAGCCTGAACGTTACGT+AGG | 0.720601 | 3.4:-70954312 | MS.gene031921:CDS |
GAAGAACTAGATCATAAAGG+CGG | 0.724609 | 3.4:-70953766 | MS.gene031921:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAATAATATCAAGAA+AGG | + | chr3.4:70952983-70953002 | None:intergenic | 10.0% |
!! | CATATATAGTAATAAAATTA+AGG | + | chr3.4:70951634-70951653 | None:intergenic | 10.0% |
!! | CTTAATTTATATATAATGAT+AGG | - | chr3.4:70955386-70955405 | MS.gene031921:intron | 10.0% |
!! | TAATTTCTTGATAAAAAAAA+GGG | - | chr3.4:70952794-70952813 | MS.gene031921:intron | 10.0% |
!! | TTAATTTCTTGATAAAAAAA+AGG | - | chr3.4:70952793-70952812 | MS.gene031921:intron | 10.0% |
!!! | AATTAATACATTTTAATTAC+AGG | - | chr3.4:70952312-70952331 | MS.gene031921:CDS | 10.0% |
!! | AAAATATGAATAATCATCAA+TGG | - | chr3.4:70951680-70951699 | MS.gene031921:CDS | 15.0% |
!! | AATTTATATATAATGATAGG+TGG | - | chr3.4:70955389-70955408 | MS.gene031921:intron | 15.0% |
!! | ATTAGTCAAATAATGATATT+TGG | + | chr3.4:70954078-70954097 | None:intergenic | 15.0% |
!! | TATACAATAAATATCAAGAT+TGG | + | chr3.4:70952204-70952223 | None:intergenic | 15.0% |
!! | TTAAATATTGTTGAATTCAA+TGG | - | chr3.4:70951535-70951554 | MS.gene031921:CDS | 15.0% |
!!! | AATTACATCTTTTTTAAAGA+AGG | - | chr3.4:70953563-70953582 | MS.gene031921:CDS | 15.0% |
!!! | TTTGTATTTTGTATTTTTTG+AGG | - | chr3.4:70951017-70951036 | MS.gene031921:CDS | 15.0% |
!!! | TTTTAAACTTTTTACACTAA+CGG | + | chr3.4:70954701-70954720 | None:intergenic | 15.0% |
!!! | TTTTTTATTTGACTTACAAA+TGG | + | chr3.4:70955069-70955088 | None:intergenic | 15.0% |
!!! | TTTTTTGTTTGAAATAAATG+AGG | - | chr3.4:70951058-70951077 | MS.gene031921:CDS | 15.0% |
!! | AATAAAAAGTTTGAACTTAC+TGG | + | chr3.4:70952722-70952741 | None:intergenic | 20.0% |
!! | AATGTATATATTTGTAAACC+AGG | + | chr3.4:70956524-70956543 | None:intergenic | 20.0% |
!! | AGAAAATAAATAGTAGTTCT+AGG | + | chr3.4:70952342-70952361 | None:intergenic | 20.0% |
!! | AGAACTTCATGAATAAATTT+CGG | + | chr3.4:70956281-70956300 | None:intergenic | 20.0% |
!! | ATTGATATATCTATGCTATT+AGG | - | chr3.4:70952656-70952675 | MS.gene031921:CDS | 20.0% |
!! | CAAATGTGATTTATTTCAAA+TGG | + | chr3.4:70953146-70953165 | None:intergenic | 20.0% |
!! | GAAAAATAACAAAAATGTGA+GGG | + | chr3.4:70952080-70952099 | None:intergenic | 20.0% |
!! | GATTCAGTTTAAATATAACA+GGG | - | chr3.4:70954904-70954923 | MS.gene031921:intron | 20.0% |
!! | TGAAAAATAACAAAAATGTG+AGG | + | chr3.4:70952081-70952100 | None:intergenic | 20.0% |
!! | TGATTCAGTTTAAATATAAC+AGG | - | chr3.4:70954903-70954922 | MS.gene031921:intron | 20.0% |
!! | TGATTTAATTCAACATTTGT+TGG | - | chr3.4:70952029-70952048 | MS.gene031921:CDS | 20.0% |
!! | TGTATACTTGATAAATTTGT+TGG | - | chr3.4:70951873-70951892 | MS.gene031921:CDS | 20.0% |
!! | TTAACTGTATTCTCTTTATT+TGG | - | chr3.4:70955316-70955335 | MS.gene031921:intron | 20.0% |
!! | TTTATAGAAACAGTTATCTT+TGG | - | chr3.4:70951394-70951413 | MS.gene031921:CDS | 20.0% |
!!! | AAAAAGCTTTTGAATTTCTT+TGG | - | chr3.4:70955613-70955632 | MS.gene031921:CDS | 20.0% |
!!! | CCTATGATTTTTTTTTATGT+GGG | + | chr3.4:70950989-70951008 | None:intergenic | 20.0% |
!!! | GATGTATTTTATGATTATGA+TGG | - | chr3.4:70953729-70953748 | MS.gene031921:CDS | 20.0% |
!!! | GATTTTAAGTCTTCTTTTTT+TGG | - | chr3.4:70951167-70951186 | MS.gene031921:CDS | 20.0% |
!!! | TATTTGAGAAATATTTTCAG+TGG | - | chr3.4:70956864-70956883 | MS.gene031921:intron | 20.0% |
!!! | TATTTTTGCAACTTAATTAG+CGG | - | chr3.4:70951118-70951137 | MS.gene031921:CDS | 20.0% |
!!! | TGAGTGTAACTTTTTTTTTT+GGG | - | chr3.4:70950936-70950955 | MS.gene031921:CDS | 20.0% |
!!! | TGGTTTTTCTAAGAAAAAAT+TGG | + | chr3.4:70952180-70952199 | None:intergenic | 20.0% |
!!! | TGTAAAAAGTTTAAAACTGT+CGG | - | chr3.4:70954705-70954724 | MS.gene031921:CDS | 20.0% |
!!! | TGTTTTTATCTTCTTTTATG+AGG | - | chr3.4:70954872-70954891 | MS.gene031921:CDS | 20.0% |
!!! | TTATAATCTTCATCAACTTT+TGG | + | chr3.4:70955480-70955499 | None:intergenic | 20.0% |
!!! | TTGAGTGTAACTTTTTTTTT+TGG | - | chr3.4:70950935-70950954 | MS.gene031921:CDS | 20.0% |
!!! | TTGTTATTTTTCATTTGACT+TGG | - | chr3.4:70952088-70952107 | MS.gene031921:CDS | 20.0% |
!!! | TTTAAAGTCACATATACAAT+TGG | + | chr3.4:70954741-70954760 | None:intergenic | 20.0% |
! | AAATTGACATGAACATTGAT+CGG | + | chr3.4:70953289-70953308 | None:intergenic | 25.0% |
! | AACTTCATTTCTTAGTAAAC+TGG | - | chr3.4:70952743-70952762 | MS.gene031921:intron | 25.0% |
! | AAGAAAAGAATTGATGAGAA+AGG | + | chr3.4:70955736-70955755 | None:intergenic | 25.0% |
! | AAGATTGTGTATCAAGTTAT+GGG | - | chr3.4:70953615-70953634 | MS.gene031921:CDS | 25.0% |
! | AATAATATCAAGAAAGGTCA+CGG | + | chr3.4:70952977-70952996 | None:intergenic | 25.0% |
! | AATGATGTGACAATTATGAT+TGG | - | chr3.4:70954790-70954809 | MS.gene031921:CDS | 25.0% |
! | AATTAACTCAGATATTGATG+AGG | - | chr3.4:70956412-70956431 | MS.gene031921:intron | 25.0% |
! | ACATCAAATTGAGAAACAAT+AGG | + | chr3.4:70953714-70953733 | None:intergenic | 25.0% |
! | ACGAGTAATGAAAAATGAAA+AGG | - | chr3.4:70956793-70956812 | MS.gene031921:intron | 25.0% |
! | AGATTGAAGATGATATACTT+AGG | - | chr3.4:70957266-70957285 | MS.gene031921:intron | 25.0% |
! | AGTAATATTCTCAATTCTGT+TGG | + | chr3.4:70956197-70956216 | None:intergenic | 25.0% |
! | AGTTAGATTCTAAATACAGA+AGG | - | chr3.4:70956306-70956325 | MS.gene031921:intron | 25.0% |
! | ATAAGTATAGAAGAACTACT+TGG | - | chr3.4:70957173-70957192 | MS.gene031921:intron | 25.0% |
! | ATACTGATATTATTAGTCCT+TGG | - | chr3.4:70953643-70953662 | MS.gene031921:CDS | 25.0% |
! | ATATAAGTTGTTCTCTTGTA+GGG | + | chr3.4:70953891-70953910 | None:intergenic | 25.0% |
! | CAATAAATATCAAGATTGGA+TGG | + | chr3.4:70952200-70952219 | None:intergenic | 25.0% |
! | CATGATTATGAAGAATGAAA+AGG | - | chr3.4:70957324-70957343 | MS.gene031921:intron | 25.0% |
! | CCCACATAAAAAAAAATCAT+AGG | - | chr3.4:70950986-70951005 | MS.gene031921:CDS | 25.0% |
! | GAAAATCCAAGTTCAAATTA+TGG | + | chr3.4:70953095-70953114 | None:intergenic | 25.0% |
! | GATTGAAGATGATATACTTA+GGG | - | chr3.4:70957267-70957286 | MS.gene031921:intron | 25.0% |
! | GGTAAAAACTCTTAATAAAG+AGG | - | chr3.4:70953350-70953369 | MS.gene031921:intron | 25.0% |
! | GTTAACTTATATGATGATCA+AGG | - | chr3.4:70953312-70953331 | MS.gene031921:intron | 25.0% |
! | TATAGATTGGATGAAGAAAT+TGG | - | chr3.4:70954988-70955007 | MS.gene031921:intron | 25.0% |
! | TCAAATGGTTAATTCAGTTA+AGG | + | chr3.4:70953131-70953150 | None:intergenic | 25.0% |
! | TTAATCTAACAATCTATAGC+CGG | + | chr3.4:70951795-70951814 | None:intergenic | 25.0% |
! | TTACGATAATTAGCATCAAA+TGG | + | chr3.4:70951596-70951615 | None:intergenic | 25.0% |
! | TTGCAAAAATATTGCAAGAT+CGG | + | chr3.4:70951109-70951128 | None:intergenic | 25.0% |
! | TTGTGAACATGATTATAGAT+TGG | - | chr3.4:70954975-70954994 | MS.gene031921:intron | 25.0% |
!! | AAATATTTTCAGTGGCAAAA+TGG | - | chr3.4:70956872-70956891 | MS.gene031921:intron | 25.0% |
!! | ACATTGTTTCAGAACAATTT+TGG | - | chr3.4:70956224-70956243 | MS.gene031921:intron | 25.0% |
!! | ATAAACCATGATTTTGAATG+TGG | - | chr3.4:70952252-70952271 | MS.gene031921:CDS | 25.0% |
!! | TCTTTAAAGAGAAGATAAAG+AGG | - | chr3.4:70954222-70954241 | MS.gene031921:CDS | 25.0% |
!!! | AGCAAATTTGATTTGAGAAA+AGG | - | chr3.4:70956737-70956756 | MS.gene031921:intron | 25.0% |
!!! | ATATGGATTTTGAAACCAAA+TGG | - | chr3.4:70954267-70954286 | MS.gene031921:CDS | 25.0% |
!!! | CTGTTTTGAAACAAGAATTA+GGG | + | chr3.4:70952457-70952476 | None:intergenic | 25.0% |
!!! | GAAATTCAAAAGCTTTTTTC+TGG | + | chr3.4:70955611-70955630 | None:intergenic | 25.0% |
!!! | GCCTATGATTTTTTTTTATG+TGG | + | chr3.4:70950990-70951009 | None:intergenic | 25.0% |
!!! | GGTTTTTAACGACATTTTTT+TGG | - | chr3.4:70951415-70951434 | MS.gene031921:CDS | 25.0% |
!!! | TATGGATTTTGAAACCAAAT+GGG | - | chr3.4:70954268-70954287 | MS.gene031921:CDS | 25.0% |
!!! | TGTTTTGAAACAAGAATTAG+GGG | + | chr3.4:70952456-70952475 | None:intergenic | 25.0% |
!!! | TTGTCGATTTCATTAATCAA+TGG | + | chr3.4:70955543-70955562 | None:intergenic | 25.0% |
AAAGAGATTATGGTACTAAC+AGG | - | chr3.4:70956896-70956915 | MS.gene031921:intron | 30.0% | |
AAATTTGAAGATCAAAGCAG+CGG | - | chr3.4:70956956-70956975 | MS.gene031921:intron | 30.0% | |
AACTCTATTAAGAATCTCAC+AGG | + | chr3.4:70956845-70956864 | None:intergenic | 30.0% | |
AAGCTATTAATGTGAACACA+AGG | - | chr3.4:70953994-70954013 | MS.gene031921:CDS | 30.0% | |
AAGTATTATGTTGAAGCCTT+TGG | + | chr3.4:70953410-70953429 | None:intergenic | 30.0% | |
ACAACATATCCAACAAAATG+AGG | + | chr3.4:70955123-70955142 | None:intergenic | 30.0% | |
ACAAGGAACAAAAATTCTGA+CGG | - | chr3.4:70954011-70954030 | MS.gene031921:CDS | 30.0% | |
ACAGAAACTTCAGAAGAAAA+TGG | - | chr3.4:70956580-70956599 | MS.gene031921:intron | 30.0% | |
ACATCAAGTTATCTTCTTGA+TGG | - | chr3.4:70954608-70954627 | MS.gene031921:CDS | 30.0% | |
ACTATCTATTATTTCCTTGC+AGG | + | chr3.4:70954414-70954433 | None:intergenic | 30.0% | |
AGATTGTGTATCAAGTTATG+GGG | - | chr3.4:70953616-70953635 | MS.gene031921:CDS | 30.0% | |
AGCATAGATATATCAATTCC+AGG | + | chr3.4:70952653-70952672 | None:intergenic | 30.0% | |
ATAATATCAAGAAAGGTCAC+GGG | + | chr3.4:70952976-70952995 | None:intergenic | 30.0% | |
ATTAGATTTGAGAACAAACG+AGG | + | chr3.4:70951368-70951387 | None:intergenic | 30.0% | |
ATTTCTTGTGCAAAGAAGAA+TGG | - | chr3.4:70954101-70954120 | MS.gene031921:CDS | 30.0% | |
CAACATATCCAACAAAATGA+GGG | + | chr3.4:70955122-70955141 | None:intergenic | 30.0% | |
CAAGATTGTGTATCAAGTTA+TGG | - | chr3.4:70953614-70953633 | MS.gene031921:CDS | 30.0% | |
CATATAAGTTGTTCTCTTGT+AGG | + | chr3.4:70953892-70953911 | None:intergenic | 30.0% | |
CATGAAGAACTAGATCATAA+AGG | - | chr3.4:70954365-70954384 | MS.gene031921:CDS | 30.0% | |
CTCTTTGTAAATTGTAGATG+TGG | - | chr3.4:70953220-70953239 | MS.gene031921:intron | 30.0% | |
CTTCAACATAATACTTGTGA+AGG | - | chr3.4:70953414-70953433 | MS.gene031921:intron | 30.0% | |
GAACTCTTAAAAATAGAGTC+AGG | - | chr3.4:70952515-70952534 | MS.gene031921:CDS | 30.0% | |
GAATTGAGAATATTACTCTC+CGG | - | chr3.4:70956200-70956219 | MS.gene031921:intron | 30.0% | |
GATTCTAAATACAGAAGGAA+AGG | - | chr3.4:70956311-70956330 | MS.gene031921:intron | 30.0% | |
GTTATCAGTTAGATTCATAC+CGG | + | chr3.4:70955367-70955386 | None:intergenic | 30.0% | |
TAAATATCAAGCCAAGTGTT+TGG | + | chr3.4:70953199-70953218 | None:intergenic | 30.0% | |
TAATGAAATCGACAACGTTT+GGG | - | chr3.4:70955548-70955567 | MS.gene031921:CDS | 30.0% | |
TACAAAATGCTGACAAATAG+CGG | - | chr3.4:70955220-70955239 | MS.gene031921:intron | 30.0% | |
TACAATCTCATGTTGTTCAT+CGG | + | chr3.4:70956561-70956580 | None:intergenic | 30.0% | |
TCATCACTTGATATTGTTGT+AGG | + | chr3.4:70954161-70954180 | None:intergenic | 30.0% | |
TCATTAATCAATGGTTCATC+AGG | + | chr3.4:70955534-70955553 | None:intergenic | 30.0% | |
TGTGAACTTCAGCTTAAAAA+AGG | - | chr3.4:70953677-70953696 | MS.gene031921:CDS | 30.0% | |
TTAAATATCAGCAATAGCGT+AGG | - | chr3.4:70955155-70955174 | MS.gene031921:intron | 30.0% | |
TTAATGAAATCGACAACGTT+TGG | - | chr3.4:70955547-70955566 | MS.gene031921:CDS | 30.0% | |
TTCACAACATTTATAAGCCA+AGG | + | chr3.4:70953663-70953682 | None:intergenic | 30.0% | |
TTCAGTATCAATGAAACGTA+AGG | + | chr3.4:70952549-70952568 | None:intergenic | 30.0% | |
TTCTAGCCATAATTTGAACT+TGG | - | chr3.4:70953086-70953105 | MS.gene031921:CDS | 30.0% | |
! | AATTTTCATCTGATCTTTCG+TGG | - | chr3.4:70953535-70953554 | MS.gene031921:CDS | 30.0% |
! | ATCAAATTTTCATCCTCCAA+AGG | - | chr3.4:70953391-70953410 | MS.gene031921:intron | 30.0% |
! | ATCATTTGTTGCATTCATCA+TGG | + | chr3.4:70951751-70951770 | None:intergenic | 30.0% |
! | CTCGAATGAAAATTTTCTGT+TGG | + | chr3.4:70954320-70954339 | None:intergenic | 30.0% |
! | GACTTAAAATCCGTTGATTA+TGG | + | chr3.4:70951158-70951177 | None:intergenic | 30.0% |
! | GTTACTTGAAGTTATTTCCA+AGG | - | chr3.4:70955760-70955779 | MS.gene031921:intron | 30.0% |
! | TAGTGATGTCAAACATGTTT+TGG | - | chr3.4:70955953-70955972 | MS.gene031921:intron | 30.0% |
! | TGAAATTAAGCCTTATAGGT+GGG | - | chr3.4:70953461-70953480 | MS.gene031921:intron | 30.0% |
! | TGATGCAAATGCCTTTTTAT+GGG | + | chr3.4:70951563-70951582 | None:intergenic | 30.0% |
! | TGTTTTGCACAGATCTTATA+TGG | + | chr3.4:70953596-70953615 | None:intergenic | 30.0% |
! | TTGATGCAAATGCCTTTTTA+TGG | + | chr3.4:70951564-70951583 | None:intergenic | 30.0% |
! | TTTTCATTACTCGTGAGATT+AGG | + | chr3.4:70956787-70956806 | None:intergenic | 30.0% |
!! | AAACATGTTTTGGATTGTCT+TGG | - | chr3.4:70955963-70955982 | MS.gene031921:intron | 30.0% |
!! | ATTTTAGTCCCTCATTTTGT+TGG | - | chr3.4:70955111-70955130 | MS.gene031921:intron | 30.0% |
!! | TAAAAAGGCATTTGCATCAA+TGG | - | chr3.4:70951564-70951583 | MS.gene031921:CDS | 30.0% |
!!! | ATAGCTTGCTTTGTTTTTGA+AGG | + | chr3.4:70957076-70957095 | None:intergenic | 30.0% |
!!! | ATGTGCAACTAAGTTTTTTG+CGG | - | chr3.4:70956688-70956707 | MS.gene031921:intron | 30.0% |
!!! | ATTTTGAAACCAAATGGGAA+GGG | - | chr3.4:70954273-70954292 | MS.gene031921:CDS | 30.0% |
!!! | GCTGTTTTGAAACAAGAATT+AGG | + | chr3.4:70952458-70952477 | None:intergenic | 30.0% |
!!! | TCTATTTTTAAGAGTTCCAC+AGG | + | chr3.4:70952512-70952531 | None:intergenic | 30.0% |
!!! | TTCTTGCATGATTTTTAGTG+AGG | - | chr3.4:70957207-70957226 | MS.gene031921:intron | 30.0% |
AAAAAAAATCATAGGCAGCG+AGG | - | chr3.4:70950994-70951013 | MS.gene031921:CDS | 35.0% | |
AACAAAAATTCTGACGGTGA+TGG | - | chr3.4:70954017-70954036 | MS.gene031921:CDS | 35.0% | |
AACAAGCATGTTGGAGAAAA+AGG | - | chr3.4:70954499-70954518 | MS.gene031921:CDS | 35.0% | |
AACCTTGATTTAGTGCTTCT+AGG | + | chr3.4:70956152-70956171 | None:intergenic | 35.0% | |
AAGAACTACTTGGAAAGAGT+GGG | - | chr3.4:70957183-70957202 | MS.gene031921:intron | 35.0% | |
ACAGTGCAGTGAAGAAAATA+AGG | - | chr3.4:70955440-70955459 | MS.gene031921:CDS | 35.0% | |
ACATGTTTGACATCACTAGA+AGG | + | chr3.4:70955951-70955970 | None:intergenic | 35.0% | |
ACTATCCTTGGATTCTTTCT+TGG | + | chr3.4:70954956-70954975 | None:intergenic | 35.0% | |
ACTTCATGTTGTGGATGATA+TGG | - | chr3.4:70954250-70954269 | MS.gene031921:CDS | 35.0% | |
AGATGATATACTTAGGGAGA+TGG | - | chr3.4:70957273-70957292 | MS.gene031921:intron | 35.0% | |
ATCATGTTCACAACTATCCT+TGG | + | chr3.4:70954968-70954987 | None:intergenic | 35.0% | |
ATTCGCACACAGAAAATACA+TGG | - | chr3.4:70956073-70956092 | MS.gene031921:intron | 35.0% | |
CACAATCTAGATTACTCGTT+GGG | - | chr3.4:70953511-70953530 | MS.gene031921:intron | 35.0% | |
CAGATATTCGGATAAGATCA+AGG | - | chr3.4:70952591-70952610 | MS.gene031921:CDS | 35.0% | |
CAGTTAAGGACAAATCATTC+AGG | + | chr3.4:70953117-70953136 | None:intergenic | 35.0% | |
CATCAAGTATCAAGATTCCA+GGG | + | chr3.4:70956118-70956137 | None:intergenic | 35.0% | |
CCTATAAGGCTTAATTTCAG+AGG | + | chr3.4:70953460-70953479 | None:intergenic | 35.0% | |
CTTACTGGAATAGACGTAAA+TGG | + | chr3.4:70952707-70952726 | None:intergenic | 35.0% | |
GAAACATCAAATAGAGACCA+GGG | + | chr3.4:70951298-70951317 | None:intergenic | 35.0% | |
GAAGAAAAATCCAACTCAAG+TGG | - | chr3.4:70955672-70955691 | MS.gene031921:intron | 35.0% | |
GAAGAACTAGATCATAAAGG+CGG | - | chr3.4:70954368-70954387 | MS.gene031921:CDS | 35.0% | |
GACATAAACCAAACCTAGAA+GGG | + | chr3.4:70952058-70952077 | None:intergenic | 35.0% | |
GCAAAATCAATGATTCTTCC+TGG | - | chr3.4:70955915-70955934 | MS.gene031921:intron | 35.0% | |
GCAAAATGGCAAAGAGATTA+TGG | - | chr3.4:70956886-70956905 | MS.gene031921:intron | 35.0% | |
GCACTTTGTCATCAGATATT+CGG | - | chr3.4:70952579-70952598 | MS.gene031921:CDS | 35.0% | |
GCTCAGAACAAATCTTACTT+TGG | + | chr3.4:70956765-70956784 | None:intergenic | 35.0% | |
GCTTATAAAGTTAGCTGCAA+AGG | - | chr3.4:70951836-70951855 | MS.gene031921:CDS | 35.0% | |
GGAAGAAAATCCTGATGATT+TGG | - | chr3.4:70954553-70954572 | MS.gene031921:CDS | 35.0% | |
GGAATCTTGATACTTGATGA+AGG | - | chr3.4:70956119-70956138 | MS.gene031921:intron | 35.0% | |
GGCGAAAAGAGTTCAAAAAA+TGG | - | chr3.4:70955826-70955845 | MS.gene031921:intron | 35.0% | |
GTAAGTAACCTAGTTGACTA+TGG | + | chr3.4:70951226-70951245 | None:intergenic | 35.0% | |
GTCGTACACATCAATAAAAC+CGG | + | chr3.4:70956477-70956496 | None:intergenic | 35.0% | |
TACTGTAAATGAGAAGTGGA+AGG | - | chr3.4:70954475-70954494 | MS.gene031921:CDS | 35.0% | |
TATGATGATCAAGGTTCACT+TGG | - | chr3.4:70953321-70953340 | MS.gene031921:intron | 35.0% | |
TATTATGTTGAAGCCTTTGG+AGG | + | chr3.4:70953407-70953426 | None:intergenic | 35.0% | |
TCAAGTGATGAAGAAGTTGA+TGG | - | chr3.4:70954170-70954189 | MS.gene031921:CDS | 35.0% | |
TCACAATCTAGATTACTCGT+TGG | - | chr3.4:70953510-70953529 | MS.gene031921:intron | 35.0% | |
TCATCAAGTATCAAGATTCC+AGG | + | chr3.4:70956119-70956138 | None:intergenic | 35.0% | |
TCATGAACATGACTTCTGTT+AGG | + | chr3.4:70954350-70954369 | None:intergenic | 35.0% | |
TCTAAATACAGAAGGAAAGG+CGG | - | chr3.4:70956314-70956333 | MS.gene031921:intron | 35.0% | |
TGAAACATCAAATAGAGACC+AGG | + | chr3.4:70951299-70951318 | None:intergenic | 35.0% | |
TGAAAGAGAAAGAAAGACAG+TGG | + | chr3.4:70951265-70951284 | None:intergenic | 35.0% | |
TGATAAAAAAAAGGGCAACC+CGG | - | chr3.4:70952802-70952821 | MS.gene031921:intron | 35.0% | |
TGATACCAAGAAAGAATCCA+AGG | - | chr3.4:70954948-70954967 | MS.gene031921:intron | 35.0% | |
TGTATTCATTTCTTCCCACA+AGG | + | chr3.4:70954582-70954601 | None:intergenic | 35.0% | |
TTATCTTCTTGATGGAACTG+CGG | - | chr3.4:70954616-70954635 | MS.gene031921:CDS | 35.0% | |
TTCCACTTCTCATTTACAGT+AGG | + | chr3.4:70954476-70954495 | None:intergenic | 35.0% | |
TTGTGGAAGATCCTTCTAAA+TGG | - | chr3.4:70957233-70957252 | MS.gene031921:intron | 35.0% | |
TTTATTGATGTGTACGACAG+TGG | - | chr3.4:70956479-70956498 | MS.gene031921:intron | 35.0% | |
TTTCTTTGGCATAACATTGC+TGG | - | chr3.4:70955627-70955646 | MS.gene031921:CDS | 35.0% | |
! | AAGCAGTATTGAATGGATCA+TGG | - | chr3.4:70952483-70952502 | MS.gene031921:CDS | 35.0% |
! | ACACATAAACCATTTTCTGC+TGG | + | chr3.4:70957120-70957139 | None:intergenic | 35.0% |
! | AGCTAGACTTGTTTGAAAGA+GGG | - | chr3.4:70956921-70956940 | MS.gene031921:intron | 35.0% |
! | ATTTTGTCTATTGCTTGCTC+CGG | - | chr3.4:70955345-70955364 | MS.gene031921:intron | 35.0% |
! | CTGAAATTAAGCCTTATAGG+TGG | - | chr3.4:70953460-70953479 | MS.gene031921:intron | 35.0% |
! | GATGTGTTGAATTTGGAGTA+CGG | - | chr3.4:70954128-70954147 | MS.gene031921:CDS | 35.0% |
! | GATTTTTCTTCCATGAGTGA+TGG | + | chr3.4:70955663-70955682 | None:intergenic | 35.0% |
! | GCATTTGAAGCAGTATTGAA+TGG | - | chr3.4:70952476-70952495 | MS.gene031921:CDS | 35.0% |
! | TCTCCTCTTTGTACCTTTTT+GGG | + | chr3.4:70955419-70955438 | None:intergenic | 35.0% |
! | TGCTCTAACTAGTTTCTACA+AGG | + | chr3.4:70952372-70952391 | None:intergenic | 35.0% |
! | TTCTCCTCTTTGTACCTTTT+TGG | + | chr3.4:70955420-70955439 | None:intergenic | 35.0% |
!! | ATCCTAGAAGCACTAAATCA+AGG | - | chr3.4:70956147-70956166 | MS.gene031921:intron | 35.0% |
!! | ATGTTGACTTACCAAACACT+TGG | - | chr3.4:70953185-70953204 | MS.gene031921:CDS | 35.0% |
!! | ATTGTTCTGAAACAATGTGC+CGG | + | chr3.4:70956222-70956241 | None:intergenic | 35.0% |
!! | CCTCTGAAATTAAGCCTTAT+AGG | - | chr3.4:70953457-70953476 | MS.gene031921:intron | 35.0% |
!! | TGCATCTTTTCTTCAAGTTC+AGG | + | chr3.4:70955582-70955601 | None:intergenic | 35.0% |
!!! | AGCTTCTAGAGTGATTTTTC+TGG | - | chr3.4:70957036-70957055 | MS.gene031921:intron | 35.0% |
!!! | GATTTTGAAACCAAATGGGA+AGG | - | chr3.4:70954272-70954291 | MS.gene031921:CDS | 35.0% |
!!! | GATTTTTAGTGAGGAGTTTG+TGG | - | chr3.4:70957216-70957235 | MS.gene031921:intron | 35.0% |
AAAATGGAAGATTCCTGTGC+CGG | - | chr3.4:70955842-70955861 | MS.gene031921:intron | 40.0% | |
AACAGCCTCTTGTGTAAAAC+AGG | + | chr3.4:70952888-70952907 | None:intergenic | 40.0% | |
AAGCCATCACATGAAGTTGA+AGG | - | chr3.4:70953774-70953793 | MS.gene031921:CDS | 40.0% | |
AAGCCTTCAACTTCATGTGA+TGG | + | chr3.4:70953780-70953799 | None:intergenic | 40.0% | |
AATTCCAGGTCGTAAAAAGC+TGG | + | chr3.4:70952639-70952658 | None:intergenic | 40.0% | |
ACAGCCTCTTGTGTAAAACA+GGG | + | chr3.4:70952887-70952906 | None:intergenic | 40.0% | |
AGACTTGAATCCTCTTCAAC+CGG | - | chr3.4:70951773-70951792 | MS.gene031921:CDS | 40.0% | |
AGAGAGAAAAAGAGTGAGAG+AGG | + | chr3.4:70951195-70951214 | None:intergenic | 40.0% | |
AGATTTGAGAACAAACGAGG+TGG | + | chr3.4:70951365-70951384 | None:intergenic | 40.0% | |
AGCCTACTGTAAATGAGAAG+TGG | - | chr3.4:70954471-70954490 | MS.gene031921:CDS | 40.0% | |
ATCAAAAGCTCAACCTCAAG+AGG | + | chr3.4:70956623-70956642 | None:intergenic | 40.0% | |
ATTCAATGGCGCCCATAAAA+AGG | - | chr3.4:70951549-70951568 | MS.gene031921:CDS | 40.0% | |
ATTGATGAGGAGAAGATGCA+GGG | - | chr3.4:70956425-70956444 | MS.gene031921:intron | 40.0% | |
CACAAACTCCATAGTCAACT+AGG | - | chr3.4:70951215-70951234 | MS.gene031921:CDS | 40.0% | |
CAGTGGAAAACAAAGAGTGA+TGG | + | chr3.4:70951248-70951267 | None:intergenic | 40.0% | |
CTCTCAACGTCCATAATCAA+CGG | - | chr3.4:70951145-70951164 | MS.gene031921:CDS | 40.0% | |
CTCTTCTTCAGATTCAGAAG+AGG | - | chr3.4:70953926-70953945 | MS.gene031921:CDS | 40.0% | |
CTCTTGTGTAAAACAGGGTA+AGG | + | chr3.4:70952882-70952901 | None:intergenic | 40.0% | |
GAAAAATCCAACTCAAGTGG+TGG | - | chr3.4:70955675-70955694 | MS.gene031921:intron | 40.0% | |
GAAAGAACGTCATTTGCTTG+AGG | - | chr3.4:70956349-70956368 | MS.gene031921:intron | 40.0% | |
GAAATGTATCCCTTCCCATT+TGG | + | chr3.4:70954285-70954304 | None:intergenic | 40.0% | |
GAACATTGATCGGATTTGTG+AGG | + | chr3.4:70953279-70953298 | None:intergenic | 40.0% | |
GAAGAACTACTTGGAAAGAG+TGG | - | chr3.4:70957182-70957201 | MS.gene031921:intron | 40.0% | |
GGAATATACTGTCTTCGATG+TGG | - | chr3.4:70955009-70955028 | MS.gene031921:intron | 40.0% | |
GGACATAAACCAAACCTAGA+AGG | + | chr3.4:70952059-70952078 | None:intergenic | 40.0% | |
GTTGTTGAGAAGTTGGAAGT+TGG | - | chr3.4:70953849-70953868 | MS.gene031921:CDS | 40.0% | |
GTTGTTGTCATGTGACTGAA+AGG | + | chr3.4:70952931-70952950 | None:intergenic | 40.0% | |
TATTGATGAGGAGAAGATGC+AGG | - | chr3.4:70956424-70956443 | MS.gene031921:intron | 40.0% | |
TCAAAAGCTCAACCTCAAGA+GGG | + | chr3.4:70956622-70956641 | None:intergenic | 40.0% | |
TCAACTTCATGTGATGGCTT+TGG | + | chr3.4:70953774-70953793 | None:intergenic | 40.0% | |
TCAATCAATGCTTGTGCTGA+AGG | - | chr3.4:70956998-70957017 | MS.gene031921:intron | 40.0% | |
TCTGATGAATCCCACCTATA+AGG | + | chr3.4:70953474-70953493 | None:intergenic | 40.0% | |
TCTTCAGATTCAGAAGAGGA+TGG | - | chr3.4:70953930-70953949 | MS.gene031921:CDS | 40.0% | |
TTGACATCACTAGAAGGTCT+TGG | + | chr3.4:70955945-70955964 | None:intergenic | 40.0% | |
! | AGGTTGTGTTGTTGAGAAGT+TGG | - | chr3.4:70953842-70953861 | MS.gene031921:CDS | 40.0% |
! | ATGCCCAAAAAGGTACAAAG+AGG | - | chr3.4:70955413-70955432 | MS.gene031921:intron | 40.0% |
! | CTTACCCTGTTTTACACAAG+AGG | - | chr3.4:70952880-70952899 | MS.gene031921:intron | 40.0% |
! | GAAGCACTAAATCAAGGTTG+AGG | - | chr3.4:70956153-70956172 | MS.gene031921:intron | 40.0% |
! | GAGCTAGACTTGTTTGAAAG+AGG | - | chr3.4:70956920-70956939 | MS.gene031921:intron | 40.0% |
! | TCTTTCATTTTGTTGCACCC+TGG | - | chr3.4:70951278-70951297 | MS.gene031921:CDS | 40.0% |
! | TGATGATTTGGATGCCTTGT+GGG | - | chr3.4:70954565-70954584 | MS.gene031921:CDS | 40.0% |
! | TGATTTTTCTGGACTCTGAG+TGG | - | chr3.4:70957047-70957066 | MS.gene031921:intron | 40.0% |
! | TTCTCTGCTTGCCATTTAGA+AGG | + | chr3.4:70957247-70957266 | None:intergenic | 40.0% |
!! | AATTCTTCTGAGACTCTTCC+TGG | - | chr3.4:70956503-70956522 | MS.gene031921:intron | 40.0% |
!! | CATTTGTTGGTTTCCCTTCT+AGG | - | chr3.4:70952042-70952061 | MS.gene031921:CDS | 40.0% |
!! | GTTGAGCTTTTGATAACCCT+CGG | - | chr3.4:70956629-70956648 | MS.gene031921:CDS | 40.0% |
!! | TGGTGCTGATGTGTTGAATT+TGG | - | chr3.4:70954121-70954140 | MS.gene031921:CDS | 40.0% |
!!! | TGCAACTAAGTTTTTTGCGG+AGG | - | chr3.4:70956691-70956710 | MS.gene031921:intron | 40.0% |
AACACAACCACCACTTGAGT+TGG | + | chr3.4:70955685-70955704 | None:intergenic | 45.0% | |
ACACAACCTACGTAACGTTC+AGG | + | chr3.4:70953831-70953850 | None:intergenic | 45.0% | |
ACACCCTAGTGTTCTTGTCA+TGG | - | chr3.4:70956007-70956026 | MS.gene031921:intron | 45.0% | |
ACAGTAGGCTCTTCTTCAGT+TGG | + | chr3.4:70954461-70954480 | None:intergenic | 45.0% | |
ACTTAGGGAGATGGTTGAAG+AGG | - | chr3.4:70957282-70957301 | MS.gene031921:intron | 45.0% | |
AGCCCATGACAAGAACACTA+GGG | + | chr3.4:70956013-70956032 | None:intergenic | 45.0% | |
AGGGCTTTCTCTCAATGCTT+TGG | + | chr3.4:70956099-70956118 | None:intergenic | 45.0% | |
ATTCAATGCTGATGCCTGCA+AGG | - | chr3.4:70954397-70954416 | MS.gene031921:CDS | 45.0% | |
ATTTCCAAGGAAACGACCTC+TGG | - | chr3.4:70955773-70955792 | MS.gene031921:intron | 45.0% | |
CAAAAACCACACTCTACACG+TGG | - | chr3.4:70955805-70955824 | MS.gene031921:intron | 45.0% | |
CAACTTTACTAGTTGCGCCA+AGG | - | chr3.4:70952947-70952966 | MS.gene031921:intron | 45.0% | |
CAATCTATAGCCGGTTGAAG+AGG | + | chr3.4:70951786-70951805 | None:intergenic | 45.0% | |
CACCCTAGTGTTCTTGTCAT+GGG | - | chr3.4:70956008-70956027 | MS.gene031921:intron | 45.0% | |
CCAGTTCCTTACAAATCGGA+GGG | + | chr3.4:70953013-70953032 | None:intergenic | 45.0% | |
CGGCCATGGATAAGATAAAC+CGG | + | chr3.4:70955864-70955883 | None:intergenic | 45.0% | |
CTAGAAGGTCTTGGAAATCC+AGG | + | chr3.4:70955936-70955955 | None:intergenic | 45.0% | |
CTCTATGGAACCATCACTCA+TGG | - | chr3.4:70955650-70955669 | MS.gene031921:CDS | 45.0% | |
CTGGGTGAACTCTGGATTAA+CGG | + | chr3.4:70953038-70953057 | None:intergenic | 45.0% | |
CTTATCTTCTTCCATCGACC+CGG | + | chr3.4:70957158-70957177 | None:intergenic | 45.0% | |
GAGGAAGAGACTTCATGTTG+TGG | - | chr3.4:70954241-70954260 | MS.gene031921:CDS | 45.0% | |
GATAGGTGGAATGCCCAAAA+AGG | - | chr3.4:70955403-70955422 | MS.gene031921:intron | 45.0% | |
GCACGCCACATTCAAAATCA+TGG | + | chr3.4:70952260-70952279 | None:intergenic | 45.0% | |
GTCATGTGACTGAAAGGTCA+CGG | + | chr3.4:70952925-70952944 | None:intergenic | 45.0% | |
GTCTTGGCAAGATACAGAAG+TGG | - | chr3.4:70955979-70955998 | MS.gene031921:intron | 45.0% | |
GTGCTGCGAAAAATCACTTC+CGG | - | chr3.4:70956455-70956474 | MS.gene031921:intron | 45.0% | |
GTGGAAGGAAACAAGCATGT+TGG | - | chr3.4:70954490-70954509 | MS.gene031921:CDS | 45.0% | |
GTGTATCAGTTACTGACGAC+CGG | - | chr3.4:70957136-70957155 | MS.gene031921:intron | 45.0% | |
TAGCCCATGACAAGAACACT+AGG | + | chr3.4:70956014-70956033 | None:intergenic | 45.0% | |
TCAAGGTTCACTTGGTACAG+AGG | - | chr3.4:70953329-70953348 | MS.gene031921:intron | 45.0% | |
TCAGATTCAGAAGAGGATGG+TGG | - | chr3.4:70953933-70953952 | MS.gene031921:CDS | 45.0% | |
TCATGTGACTGAAAGGTCAC+GGG | + | chr3.4:70952924-70952943 | None:intergenic | 45.0% | |
TGGATAAGATAAACCGGCAC+AGG | + | chr3.4:70955858-70955877 | None:intergenic | 45.0% | |
TGGGTGAACTCTGGATTAAC+GGG | + | chr3.4:70953037-70953056 | None:intergenic | 45.0% | |
TGGTGGTAAGAGGGATCAAA+AGG | - | chr3.4:70953950-70953969 | MS.gene031921:CDS | 45.0% | |
TGTATCAGTTACTGACGACC+GGG | - | chr3.4:70957137-70957156 | MS.gene031921:intron | 45.0% | |
TGTGTTATATCACATGCCCC+TGG | - | chr3.4:70955699-70955718 | MS.gene031921:intron | 45.0% | |
! | AAAGGTTTTTCCTGCTCCAG+GGG | + | chr3.4:70955718-70955737 | None:intergenic | 45.0% |
! | ACCATGGATGTATTGATCCG+AGG | + | chr3.4:70956649-70956668 | None:intergenic | 45.0% |
! | AGAAAGGTTTTTCCTGCTCC+AGG | + | chr3.4:70955720-70955739 | None:intergenic | 45.0% |
! | AGAAGAGGATGGTGGTAAGA+GGG | - | chr3.4:70953941-70953960 | MS.gene031921:CDS | 45.0% |
! | CACAAGGCATCCAAATCATC+AGG | + | chr3.4:70954566-70954585 | None:intergenic | 45.0% |
! | CACGTGTAGAGTGTGGTTTT+TGG | + | chr3.4:70955807-70955826 | None:intergenic | 45.0% |
! | CCATGGATGTATTGATCCGA+GGG | + | chr3.4:70956648-70956667 | None:intergenic | 45.0% |
! | CTGATGATTTGGATGCCTTG+TGG | - | chr3.4:70954564-70954583 | MS.gene031921:CDS | 45.0% |
! | GAAAGGTTTTTCCTGCTCCA+GGG | + | chr3.4:70955719-70955738 | None:intergenic | 45.0% |
! | GTTGGTTTCCCTTCTAGGTT+TGG | - | chr3.4:70952047-70952066 | MS.gene031921:CDS | 45.0% |
! | TAAACCATTTTCTGCTGGCC+CGG | + | chr3.4:70957115-70957134 | None:intergenic | 45.0% |
! | TCTGAACCCTCCGATTTGTA+AGG | - | chr3.4:70953004-70953023 | MS.gene031921:intron | 45.0% |
! | TGACGGTGATGGCAAGTTTA+AGG | - | chr3.4:70954028-70954047 | MS.gene031921:CDS | 45.0% |
! | TTACACAAGAGGCTGTTTCC+AGG | - | chr3.4:70952891-70952910 | MS.gene031921:intron | 45.0% |
!! | AAAGCATTGAGAGAAAGCCC+TGG | - | chr3.4:70956098-70956117 | MS.gene031921:intron | 45.0% |
!! | ACTTCATGTGATGGCTTTGG+TGG | + | chr3.4:70953771-70953790 | None:intergenic | 45.0% |
!! | GCATAACATTGCTGGCTCTA+TGG | - | chr3.4:70955635-70955654 | MS.gene031921:CDS | 45.0% |
!! | GTGCCGGTTTATCTTATCCA+TGG | - | chr3.4:70955858-70955877 | MS.gene031921:intron | 45.0% |
!!! | AGAGTGTGGTTTTTGGAGCT+AGG | + | chr3.4:70955800-70955819 | None:intergenic | 45.0% |
!!! | GCAGCTGTTTTGATCAACCA+TGG | + | chr3.4:70956665-70956684 | None:intergenic | 45.0% |
AAACAGGGTAAGGCTGCGTA+TGG | + | chr3.4:70952872-70952891 | None:intergenic | 50.0% | |
ACTAGACTTAACGTCGCTCC+TGG | + | chr3.4:70953057-70953076 | None:intergenic | 50.0% | |
AGAAAGGTCACGGGTAACCT+TGG | + | chr3.4:70952967-70952986 | None:intergenic | 50.0% | |
CCCTCGGATCAATACATCCA+TGG | - | chr3.4:70956645-70956664 | MS.gene031921:CDS | 50.0% | |
CGTTAATCCAGAGTTCACCC+AGG | - | chr3.4:70953036-70953055 | MS.gene031921:intron | 50.0% | |
CTAGACTTAACGTCGCTCCT+GGG | + | chr3.4:70953056-70953075 | None:intergenic | 50.0% | |
CTCAACCTCAAGAGGGTAAC+TGG | + | chr3.4:70956615-70956634 | None:intergenic | 50.0% | |
CTGTCGTCGAACTTGAACCT+GGG | + | chr3.4:70955896-70955915 | None:intergenic | 50.0% | |
GAATGGATCATGGCAACCTG+TGG | - | chr3.4:70952493-70952512 | MS.gene031921:CDS | 50.0% | |
GAGTACCAGTTACCCTCTTG+AGG | - | chr3.4:70956607-70956626 | MS.gene031921:intron | 50.0% | |
GCCAGTTCCTTACAAATCGG+AGG | + | chr3.4:70953014-70953033 | None:intergenic | 50.0% | |
GGGGCCAGTTCCTTACAAAT+CGG | + | chr3.4:70953017-70953036 | None:intergenic | 50.0% | |
GGGTGAACTCTGGATTAACG+GGG | + | chr3.4:70953036-70953055 | None:intergenic | 50.0% | |
GTACAGCCTGAACGTTACGT+AGG | - | chr3.4:70953822-70953841 | MS.gene031921:CDS | 50.0% | |
TCATGCAACGCGAGAGTCTT+CGG | + | chr3.4:70951496-70951515 | None:intergenic | 50.0% | |
TGTCGTCGAACTTGAACCTG+GGG | + | chr3.4:70955895-70955914 | None:intergenic | 50.0% | |
! | AGCATCGAAAAGCGATGACG+AGG | - | chr3.4:70954532-70954551 | MS.gene031921:CDS | 50.0% |
! | CAGAAGAGGATGGTGGTAAG+AGG | - | chr3.4:70953940-70953959 | MS.gene031921:CDS | 50.0% |
! | CCCTCCGATTTGTAAGGAAC+TGG | - | chr3.4:70953010-70953029 | MS.gene031921:intron | 50.0% |
! | TATTGCACGCGCTTTTCGAC+CGG | - | chr3.4:70957093-70957112 | MS.gene031921:intron | 50.0% |
! | TGCTCCAGCTTTTTACGACC+TGG | - | chr3.4:70952632-70952651 | MS.gene031921:CDS | 50.0% |
! | TTTTCGCCACGTGTAGAGTG+TGG | + | chr3.4:70955814-70955833 | None:intergenic | 50.0% |
!!! | GTTTTTGGAGCTAGGACCAG+AGG | + | chr3.4:70955792-70955811 | None:intergenic | 50.0% |
AAGGTCACGGGTTCAAGTCC+TGG | + | chr3.4:70952912-70952931 | None:intergenic | 55.0% | |
ACTAGAGCTCCCGCATATGC+AGG | - | chr3.4:70952828-70952847 | MS.gene031921:intron | 55.0% | |
AGGACCAGAGGTCGTTTCCT+TGG | + | chr3.4:70955780-70955799 | None:intergenic | 55.0% | |
AGGGTAAGGCTGCGTATGGT+GGG | + | chr3.4:70952868-70952887 | None:intergenic | 55.0% | |
ATATCACATGCCCCTGGAGC+AGG | - | chr3.4:70955705-70955724 | MS.gene031921:intron | 55.0% | |
CTAGAGCTCCCGCATATGCA+GGG | - | chr3.4:70952829-70952848 | MS.gene031921:intron | 55.0% | |
GCTGTCGTCGAACTTGAACC+TGG | + | chr3.4:70955897-70955916 | None:intergenic | 55.0% | |
GCTTGCGACGTTCGAAACGT+AGG | - | chr3.4:70953796-70953815 | MS.gene031921:CDS | 55.0% | |
TTGAACCTGGGGAGGTTCGA+CGG | + | chr3.4:70955884-70955903 | None:intergenic | 55.0% | |
! | ATTGCACGCGCTTTTCGACC+GGG | - | chr3.4:70957094-70957113 | MS.gene031921:intron | 55.0% |
CAGGGTAAGGCTGCGTATGG+TGG | + | chr3.4:70952869-70952888 | None:intergenic | 60.0% | |
CATATGCAGGGTCCGGGAAG+GGG | - | chr3.4:70952841-70952860 | MS.gene031921:intron | 60.0% | |
CGTCGAACTTGAACCTGGGG+AGG | + | chr3.4:70955892-70955911 | None:intergenic | 60.0% | |
CTTCCCGGACCCTGCATATG+CGG | + | chr3.4:70952841-70952860 | None:intergenic | 60.0% | |
GCATATGCAGGGTCCGGGAA+GGG | - | chr3.4:70952840-70952859 | MS.gene031921:intron | 60.0% | |
GTTACTGACGACCGGGTCGA+TGG | - | chr3.4:70957144-70957163 | MS.gene031921:intron | 60.0% | |
TCGACCGGGCCAGCAGAAAA+TGG | - | chr3.4:70957108-70957127 | MS.gene031921:intron | 60.0% | |
TTCCCGGACCCTGCATATGC+GGG | + | chr3.4:70952840-70952859 | None:intergenic | 60.0% | |
! | ATGCGGGAGCTCTAGTGCAC+CGG | + | chr3.4:70952824-70952843 | None:intergenic | 60.0% |
CGCATATGCAGGGTCCGGGA+AGG | - | chr3.4:70952839-70952858 | MS.gene031921:intron | 65.0% | |
CGTCGCTCCTGGGTGAACTC+TGG | + | chr3.4:70953046-70953065 | None:intergenic | 65.0% | |
CTCCCGCATATGCAGGGTCC+GGG | - | chr3.4:70952835-70952854 | MS.gene031921:intron | 65.0% | |
GCTCCCGCATATGCAGGGTC+CGG | - | chr3.4:70952834-70952853 | MS.gene031921:intron | 65.0% | |
! | CGTATGGTGGGACCCCTTCC+CGG | + | chr3.4:70952856-70952875 | None:intergenic | 65.0% |
! | TGCGGGAGCTCTAGTGCACC+GGG | + | chr3.4:70952823-70952842 | None:intergenic | 65.0% |
CATGGCCGTCGAACCTCCCC+AGG | - | chr3.4:70955876-70955895 | MS.gene031921:intron | 70.0% | |
CTGGGGAGGTTCGACGGCCA+TGG | + | chr3.4:70955878-70955897 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.4 | gene | 70950796 | 70957360 | 70950796 | ID=MS.gene031921 |
chr3.4 | mRNA | 70950796 | 70957360 | 70950796 | ID=MS.gene031921.t1;Parent=MS.gene031921 |
chr3.4 | exon | 70957355 | 70957360 | 70957355 | ID=MS.gene031921.t1.exon1;Parent=MS.gene031921.t1 |
chr3.4 | CDS | 70957355 | 70957360 | 70957355 | ID=cds.MS.gene031921.t1;Parent=MS.gene031921.t1 |
chr3.4 | exon | 70957141 | 70957148 | 70957141 | ID=MS.gene031921.t1.exon2;Parent=MS.gene031921.t1 |
chr3.4 | CDS | 70957141 | 70957148 | 70957141 | ID=cds.MS.gene031921.t1;Parent=MS.gene031921.t1 |
chr3.4 | exon | 70956623 | 70956675 | 70956623 | ID=MS.gene031921.t1.exon3;Parent=MS.gene031921.t1 |
chr3.4 | CDS | 70956623 | 70956675 | 70956623 | ID=cds.MS.gene031921.t1;Parent=MS.gene031921.t1 |
chr3.4 | exon | 70955435 | 70955679 | 70955435 | ID=MS.gene031921.t1.exon4;Parent=MS.gene031921.t1 |
chr3.4 | CDS | 70955435 | 70955679 | 70955435 | ID=cds.MS.gene031921.t1;Parent=MS.gene031921.t1 |
chr3.4 | exon | 70953519 | 70954919 | 70953519 | ID=MS.gene031921.t1.exon5;Parent=MS.gene031921.t1 |
chr3.4 | CDS | 70953519 | 70954919 | 70953519 | ID=cds.MS.gene031921.t1;Parent=MS.gene031921.t1 |
chr3.4 | exon | 70953085 | 70953231 | 70953085 | ID=MS.gene031921.t1.exon6;Parent=MS.gene031921.t1 |
chr3.4 | CDS | 70953085 | 70953231 | 70953085 | ID=cds.MS.gene031921.t1;Parent=MS.gene031921.t1 |
chr3.4 | exon | 70950796 | 70952748 | 70950796 | ID=MS.gene031921.t1.exon7;Parent=MS.gene031921.t1 |
chr3.4 | CDS | 70950796 | 70952748 | 70950796 | ID=cds.MS.gene031921.t1;Parent=MS.gene031921.t1 |
Gene Sequence |
Protein sequence |