Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031943.t1 | XP_003600955.1 | 99.2 | 119 | 1 | 0 | 1 | 119 | 1 | 119 | 1.90E-60 | 241.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031943.t1 | Q9SRL8 | 78.4 | 111 | 24 | 0 | 4 | 114 | 1 | 111 | 8.4e-46 | 184.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031943.t1 | G7JBW6 | 99.2 | 119 | 1 | 0 | 1 | 119 | 1 | 119 | 1.3e-60 | 241.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene031943.t1 | TF | LOB |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031943.t1 | MTR_3g071420 | 91.275 | 149 | 8 | 1 | 1 | 144 | 1 | 149 | 1.62e-80 | 235 |
| MS.gene031943.t1 | MTR_5g083010 | 76.596 | 141 | 33 | 0 | 4 | 144 | 1 | 141 | 1.05e-74 | 220 |
| MS.gene031943.t1 | MTR_7g033800 | 64.151 | 106 | 38 | 0 | 11 | 116 | 8 | 113 | 1.04e-46 | 149 |
| MS.gene031943.t1 | MTR_6g005070 | 65.094 | 106 | 37 | 0 | 11 | 116 | 6 | 111 | 2.54e-46 | 147 |
| MS.gene031943.t1 | MTR_5g083230 | 64.078 | 103 | 37 | 0 | 12 | 114 | 4 | 106 | 1.54e-44 | 144 |
| MS.gene031943.t1 | MTR_3g031660 | 52.000 | 125 | 59 | 1 | 12 | 136 | 5 | 128 | 7.36e-44 | 142 |
| MS.gene031943.t1 | MTR_4g105170 | 60.952 | 105 | 41 | 0 | 12 | 116 | 9 | 113 | 8.36e-44 | 142 |
| MS.gene031943.t1 | MTR_3g071590 | 61.905 | 105 | 40 | 0 | 10 | 114 | 4 | 108 | 8.37e-44 | 141 |
| MS.gene031943.t1 | MTR_6g005080 | 62.264 | 106 | 40 | 0 | 11 | 116 | 7 | 112 | 9.23e-44 | 141 |
| MS.gene031943.t1 | MTR_4g083680 | 52.846 | 123 | 58 | 0 | 11 | 133 | 12 | 134 | 1.35e-43 | 141 |
| MS.gene031943.t1 | MTR_3g077240 | 61.905 | 105 | 40 | 0 | 12 | 116 | 8 | 112 | 1.47e-43 | 142 |
| MS.gene031943.t1 | MTR_5g083960 | 49.630 | 135 | 62 | 1 | 11 | 145 | 36 | 164 | 1.23e-42 | 140 |
| MS.gene031943.t1 | MTR_3g073690 | 61.905 | 105 | 40 | 0 | 11 | 115 | 6 | 110 | 2.46e-42 | 139 |
| MS.gene031943.t1 | MTR_2g068760 | 58.491 | 106 | 44 | 0 | 6 | 111 | 5 | 110 | 4.58e-41 | 134 |
| MS.gene031943.t1 | MTR_5g017950 | 56.303 | 119 | 52 | 0 | 11 | 129 | 5 | 123 | 6.77e-41 | 139 |
| MS.gene031943.t1 | MTR_3g452660 | 60.000 | 105 | 42 | 0 | 11 | 115 | 4 | 108 | 1.29e-40 | 137 |
| MS.gene031943.t1 | MTR_8g040900 | 58.120 | 117 | 47 | 1 | 11 | 125 | 4 | 120 | 1.80e-39 | 132 |
| MS.gene031943.t1 | MTR_3g094690 | 55.046 | 109 | 49 | 0 | 15 | 123 | 48 | 156 | 1.15e-37 | 128 |
| MS.gene031943.t1 | MTR_5g075020 | 55.263 | 114 | 51 | 0 | 15 | 128 | 44 | 157 | 9.21e-37 | 126 |
| MS.gene031943.t1 | MTR_5g075020 | 54.310 | 116 | 53 | 0 | 13 | 128 | 46 | 161 | 1.55e-36 | 125 |
| MS.gene031943.t1 | MTR_2g093310 | 54.902 | 102 | 46 | 0 | 13 | 114 | 32 | 133 | 4.63e-36 | 123 |
| MS.gene031943.t1 | MTR_3g094690 | 54.128 | 109 | 49 | 1 | 15 | 123 | 48 | 155 | 3.90e-35 | 122 |
| MS.gene031943.t1 | MTR_1g095850 | 46.923 | 130 | 66 | 2 | 15 | 141 | 73 | 202 | 9.73e-35 | 120 |
| MS.gene031943.t1 | MTR_1g070220 | 50.435 | 115 | 55 | 2 | 1 | 113 | 1 | 115 | 1.65e-34 | 119 |
| MS.gene031943.t1 | MTR_7g096530 | 47.863 | 117 | 60 | 1 | 1 | 116 | 1 | 117 | 1.80e-34 | 119 |
| MS.gene031943.t1 | MTR_4g060950 | 56.701 | 97 | 41 | 1 | 13 | 108 | 23 | 119 | 2.29e-34 | 119 |
| MS.gene031943.t1 | MTR_8g036085 | 52.941 | 102 | 47 | 1 | 15 | 115 | 24 | 125 | 3.70e-34 | 119 |
| MS.gene031943.t1 | MTR_8g036105 | 49.558 | 113 | 56 | 1 | 4 | 115 | 8 | 120 | 5.05e-34 | 118 |
| MS.gene031943.t1 | MTR_7g074990 | 51.485 | 101 | 48 | 1 | 15 | 114 | 21 | 121 | 8.07e-34 | 118 |
| MS.gene031943.t1 | MTR_6g027710 | 41.985 | 131 | 73 | 2 | 15 | 144 | 41 | 169 | 1.02e-32 | 115 |
| MS.gene031943.t1 | MTR_7g096610 | 49.541 | 109 | 53 | 2 | 11 | 117 | 5 | 113 | 3.30e-32 | 114 |
| MS.gene031943.t1 | MTR_7g028905 | 44.660 | 103 | 57 | 0 | 13 | 115 | 4 | 106 | 7.37e-32 | 110 |
| MS.gene031943.t1 | MTR_1g070205 | 48.544 | 103 | 52 | 1 | 15 | 116 | 13 | 115 | 7.73e-31 | 110 |
| MS.gene031943.t1 | MTR_5g080470 | 45.283 | 106 | 57 | 1 | 12 | 116 | 5 | 110 | 8.09e-31 | 109 |
| MS.gene031943.t1 | MTR_5g093010 | 43.564 | 101 | 57 | 0 | 15 | 115 | 6 | 106 | 8.85e-30 | 105 |
| MS.gene031943.t1 | MTR_7g075230 | 50.000 | 104 | 49 | 2 | 15 | 115 | 13 | 116 | 7.11e-29 | 105 |
| MS.gene031943.t1 | MTR_8g079660 | 48.039 | 102 | 53 | 0 | 15 | 116 | 9 | 110 | 4.43e-28 | 104 |
| MS.gene031943.t1 | MTR_6g027700 | 40.517 | 116 | 68 | 1 | 15 | 129 | 8 | 123 | 6.23e-27 | 100 |
| MS.gene031943.t1 | MTR_8g079620 | 44.118 | 102 | 57 | 0 | 15 | 116 | 9 | 110 | 1.85e-24 | 94.7 |
| MS.gene031943.t1 | MTR_4g107450 | 39.815 | 108 | 65 | 0 | 11 | 118 | 7 | 114 | 1.09e-23 | 93.6 |
| MS.gene031943.t1 | MTR_6g011230 | 35.484 | 124 | 79 | 1 | 11 | 133 | 8 | 131 | 1.78e-22 | 88.6 |
| MS.gene031943.t1 | MTR_8g079580 | 37.600 | 125 | 75 | 2 | 15 | 138 | 9 | 131 | 4.35e-22 | 88.2 |
| MS.gene031943.t1 | MTR_6g011200 | 37.273 | 110 | 68 | 1 | 10 | 118 | 5 | 114 | 1.76e-21 | 87.0 |
| MS.gene031943.t1 | MTR_6g011250 | 36.364 | 110 | 69 | 1 | 10 | 118 | 5 | 114 | 1.37e-20 | 83.2 |
| MS.gene031943.t1 | MTR_2g100020 | 32.727 | 110 | 74 | 0 | 11 | 120 | 16 | 125 | 2.03e-20 | 84.7 |
| MS.gene031943.t1 | MTR_8g017090 | 33.333 | 108 | 72 | 0 | 11 | 118 | 9 | 116 | 7.79e-20 | 83.6 |
| MS.gene031943.t1 | MTR_4g099230 | 32.231 | 121 | 73 | 3 | 15 | 130 | 3 | 119 | 5.19e-19 | 78.6 |
| MS.gene031943.t1 | MTR_5g085390 | 34.400 | 125 | 73 | 3 | 10 | 129 | 5 | 125 | 7.54e-18 | 77.0 |
| MS.gene031943.t1 | MTR_4g088035 | 31.111 | 90 | 62 | 0 | 11 | 100 | 3 | 92 | 7.59e-14 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031943.t1 | AT3G11090 | 66.667 | 138 | 46 | 0 | 4 | 141 | 1 | 138 | 9.85e-63 | 190 |
| MS.gene031943.t1 | AT3G27650 | 64.151 | 106 | 38 | 0 | 11 | 116 | 36 | 141 | 2.37e-45 | 145 |
| MS.gene031943.t1 | AT5G66870 | 62.857 | 105 | 39 | 0 | 11 | 115 | 4 | 108 | 1.02e-43 | 146 |
| MS.gene031943.t1 | AT5G63090 | 58.407 | 113 | 47 | 0 | 12 | 124 | 9 | 121 | 2.89e-43 | 141 |
| MS.gene031943.t1 | AT5G63090 | 58.407 | 113 | 47 | 0 | 12 | 124 | 9 | 121 | 2.89e-43 | 141 |
| MS.gene031943.t1 | AT5G63090 | 58.407 | 113 | 47 | 0 | 12 | 124 | 9 | 121 | 2.89e-43 | 141 |
| MS.gene031943.t1 | AT5G63090 | 58.407 | 113 | 47 | 0 | 12 | 124 | 9 | 121 | 2.89e-43 | 141 |
| MS.gene031943.t1 | AT2G23660 | 60.577 | 104 | 41 | 0 | 11 | 114 | 2 | 105 | 2.04e-42 | 142 |
| MS.gene031943.t1 | AT2G23660 | 60.577 | 104 | 41 | 0 | 11 | 114 | 2 | 105 | 2.04e-42 | 142 |
| MS.gene031943.t1 | AT2G23660 | 60.577 | 104 | 41 | 0 | 11 | 114 | 2 | 105 | 2.04e-42 | 142 |
| MS.gene031943.t1 | AT2G30130 | 59.615 | 104 | 42 | 0 | 11 | 114 | 5 | 108 | 6.75e-42 | 138 |
| MS.gene031943.t1 | AT1G16530 | 49.630 | 135 | 61 | 2 | 10 | 137 | 10 | 144 | 3.81e-40 | 132 |
| MS.gene031943.t1 | AT2G30340 | 55.263 | 114 | 50 | 1 | 15 | 128 | 54 | 166 | 4.85e-39 | 133 |
| MS.gene031943.t1 | AT2G30340 | 55.263 | 114 | 50 | 1 | 15 | 128 | 53 | 165 | 5.05e-39 | 132 |
| MS.gene031943.t1 | AT1G65620 | 56.140 | 114 | 50 | 0 | 11 | 124 | 6 | 119 | 9.03e-39 | 130 |
| MS.gene031943.t1 | AT1G65620 | 56.140 | 114 | 50 | 0 | 11 | 124 | 6 | 119 | 9.03e-39 | 130 |
| MS.gene031943.t1 | AT1G65620 | 56.140 | 114 | 50 | 0 | 11 | 124 | 6 | 119 | 9.03e-39 | 130 |
| MS.gene031943.t1 | AT1G65620 | 56.140 | 114 | 50 | 0 | 11 | 124 | 6 | 119 | 9.03e-39 | 130 |
| MS.gene031943.t1 | AT1G65620 | 56.140 | 114 | 50 | 0 | 11 | 124 | 6 | 119 | 9.03e-39 | 130 |
| MS.gene031943.t1 | AT1G31320 | 60.000 | 90 | 36 | 0 | 11 | 100 | 10 | 99 | 1.54e-37 | 126 |
| MS.gene031943.t1 | AT2G40470 | 53.846 | 117 | 54 | 0 | 15 | 131 | 21 | 137 | 1.60e-37 | 127 |
| MS.gene031943.t1 | AT2G40470 | 53.846 | 117 | 54 | 0 | 15 | 131 | 46 | 162 | 2.80e-37 | 127 |
| MS.gene031943.t1 | AT1G07900 | 58.586 | 99 | 41 | 0 | 13 | 111 | 32 | 130 | 3.66e-37 | 125 |
| MS.gene031943.t1 | AT2G28500 | 58.333 | 96 | 40 | 0 | 13 | 108 | 54 | 149 | 6.64e-36 | 124 |
| MS.gene031943.t1 | AT4G00210 | 52.336 | 107 | 50 | 1 | 15 | 120 | 12 | 118 | 4.38e-35 | 121 |
| MS.gene031943.t1 | AT3G03760 | 48.649 | 111 | 56 | 1 | 13 | 122 | 50 | 160 | 7.91e-35 | 122 |
| MS.gene031943.t1 | AT4G00220 | 43.056 | 144 | 65 | 2 | 17 | 143 | 20 | 163 | 1.25e-33 | 118 |
| MS.gene031943.t1 | AT3G26660 | 48.515 | 101 | 52 | 0 | 15 | 115 | 6 | 106 | 1.64e-33 | 114 |
| MS.gene031943.t1 | AT2G42430 | 47.500 | 120 | 62 | 1 | 5 | 123 | 6 | 125 | 1.66e-33 | 118 |
| MS.gene031943.t1 | AT3G26620 | 48.515 | 101 | 52 | 0 | 15 | 115 | 6 | 106 | 2.04e-33 | 114 |
| MS.gene031943.t1 | AT2G45420 | 50.000 | 100 | 49 | 1 | 17 | 115 | 40 | 139 | 1.38e-32 | 116 |
| MS.gene031943.t1 | AT3G58190 | 43.443 | 122 | 65 | 2 | 15 | 135 | 12 | 130 | 2.29e-31 | 112 |
| MS.gene031943.t1 | AT2G42440 | 47.115 | 104 | 54 | 1 | 11 | 113 | 4 | 107 | 9.55e-31 | 110 |
| MS.gene031943.t1 | AT5G06080 | 45.631 | 103 | 55 | 1 | 13 | 114 | 6 | 108 | 1.97e-30 | 108 |
| MS.gene031943.t1 | AT2G45410 | 51.000 | 100 | 48 | 1 | 17 | 115 | 19 | 118 | 2.46e-30 | 108 |
| MS.gene031943.t1 | AT2G31310 | 43.396 | 106 | 59 | 1 | 12 | 116 | 5 | 110 | 1.16e-29 | 106 |
| MS.gene031943.t1 | AT3G50510 | 47.115 | 104 | 55 | 0 | 12 | 115 | 10 | 113 | 2.78e-28 | 103 |
| MS.gene031943.t1 | AT3G50510 | 47.115 | 104 | 55 | 0 | 12 | 115 | 10 | 113 | 2.78e-28 | 103 |
| MS.gene031943.t1 | AT5G35900 | 36.000 | 125 | 80 | 0 | 11 | 135 | 2 | 126 | 3.48e-27 | 100 |
| MS.gene031943.t1 | AT3G13850 | 37.963 | 108 | 67 | 0 | 14 | 121 | 36 | 143 | 1.59e-23 | 92.8 |
| MS.gene031943.t1 | AT1G72980 | 34.677 | 124 | 81 | 0 | 11 | 134 | 10 | 133 | 2.62e-22 | 88.6 |
| MS.gene031943.t1 | AT3G47870 | 34.862 | 109 | 71 | 0 | 11 | 119 | 33 | 141 | 2.44e-19 | 82.4 |
| MS.gene031943.t1 | AT4G22700 | 39.252 | 107 | 61 | 3 | 11 | 115 | 2 | 106 | 6.90e-19 | 79.0 |
| MS.gene031943.t1 | AT1G06280 | 44.872 | 78 | 43 | 0 | 14 | 91 | 24 | 101 | 2.56e-18 | 77.8 |
| MS.gene031943.t1 | AT2G19820 | 35.632 | 87 | 55 | 1 | 15 | 100 | 13 | 99 | 9.46e-13 | 61.2 |
| MS.gene031943.t1 | AT5G15060 | 39.474 | 76 | 42 | 2 | 13 | 85 | 16 | 90 | 1.01e-12 | 61.6 |
Find 22 sgRNAs with CRISPR-Local
Find 42 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTAAAGTTCACAAAGTATT+TGG | 0.136847 | 3.4:-70666231 | MS.gene031943:CDS |
| TAATTTCATGGTCAGGATTC+AGG | 0.234257 | 3.4:+70665575 | None:intergenic |
| AGGCTTAAAGACCCAGTTTA+TGG | 0.242004 | 3.4:-70666120 | MS.gene031943:CDS |
| GAACCAATGCATCCATAAAC+TGG | 0.317210 | 3.4:+70666108 | None:intergenic |
| GATGGAACTTCAACATGATT+TGG | 0.337444 | 3.4:-70666061 | MS.gene031943:CDS |
| AAGTGAAATGAAAGGCATAA+AGG | 0.382977 | 3.4:-70666367 | None:intergenic |
| ATTTCTTGCACTCGTTAGAA+TGG | 0.427400 | 3.4:+70666256 | None:intergenic |
| GACCCAGTTTATGGATGCAT+TGG | 0.436697 | 3.4:-70666111 | MS.gene031943:CDS |
| AGTGAAATGAAAGGCATAAA+GGG | 0.450119 | 3.4:-70666366 | None:intergenic |
| TAAGGTGCAAATAAGCAATC+TGG | 0.484939 | 3.4:+70666282 | None:intergenic |
| CTTCCTTTGCAACATAGCTA+TGG | 0.497960 | 3.4:+70666086 | None:intergenic |
| ACATGATTTGGCCATTGCTA+AGG | 0.501000 | 3.4:-70666049 | MS.gene031943:CDS |
| CACTCGTTAGAATGGAAGTA+AGG | 0.514845 | 3.4:+70666264 | None:intergenic |
| TATGTTGCAAAGGAAGATGA+TGG | 0.575914 | 3.4:-70666079 | MS.gene031943:CDS |
| GTTCCATAGCTATGTTGCAA+AGG | 0.579187 | 3.4:-70666089 | MS.gene031943:CDS |
| AGCAAGACGTTCCTTAGCAA+TGG | 0.581078 | 3.4:+70666038 | None:intergenic |
| AATTACAGAAGGAGTTGTTG+TGG | 0.604155 | 3.4:+70665978 | None:intergenic |
| TTGCTTATGAAGCAGAAGCA+AGG | 0.610245 | 3.4:-70666140 | MS.gene031943:CDS |
| AACCAATGCATCCATAAACT+GGG | 0.613188 | 3.4:+70666109 | None:intergenic |
| GTGCACACAAGTGAAATGAA+AGG | 0.632849 | 3.4:-70666375 | None:intergenic |
| GCACAAGATGAGCTTGAACG+TGG | 0.651989 | 3.4:+70666336 | None:intergenic |
| TACAGAAGGAGTTGTTGTGG+TGG | 0.695339 | 3.4:+70665981 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTAATTCACAAAAAAG+GGG | + | chr3.4:70666158-70666177 | None:intergenic | 15.0% |
| !!! | ACAATTTTAATTCACAAAAA+AGG | + | chr3.4:70666160-70666179 | None:intergenic | 15.0% |
| !!! | CAATTTTAATTCACAAAAAA+GGG | + | chr3.4:70666159-70666178 | None:intergenic | 15.0% |
| !! | TTATCTCTTATAACAATTAC+CGG | + | chr3.4:70666271-70666290 | None:intergenic | 20.0% |
| !!! | ATTTTAATTCACAAAAAAGG+GGG | + | chr3.4:70666157-70666176 | None:intergenic | 20.0% |
| ! | CCATATGATCAAAATGTATA+AGG | + | chr3.4:70666132-70666151 | None:intergenic | 25.0% |
| ! | GTGTTAATACATAATTTCCA+TGG | - | chr3.4:70666243-70666262 | MS.gene031943:CDS | 25.0% |
| !!! | CCTTATACATTTTGATCATA+TGG | - | chr3.4:70666129-70666148 | MS.gene031943:CDS | 25.0% |
| !!! | GCTGGAAAATATTGTTTTTT+TGG | - | chr3.4:70666296-70666315 | MS.gene031943:CDS | 25.0% |
| !!! | TTTTAATTCACAAAAAAGGG+GGG | + | chr3.4:70666156-70666175 | None:intergenic | 25.0% |
| ATACATAATTTCCATGGTTC+CGG | - | chr3.4:70666249-70666268 | MS.gene031943:CDS | 30.0% | |
| TGCAAACTATCAATTACAGA+AGG | + | chr3.4:70665982-70666001 | None:intergenic | 30.0% | |
| TTATAAGAGATAAGAACTGC+TGG | - | chr3.4:70666278-70666297 | MS.gene031943:CDS | 30.0% | |
| ! | CTCAATGATATCTTTTGTCA+TGG | - | chr3.4:70666051-70666070 | MS.gene031943:CDS | 30.0% |
| ! | GCTAAAGTTCACAAAGTATT+TGG | - | chr3.4:70665715-70665734 | MS.gene031943:intron | 30.0% |
| AACCAATGCATCCATAAACT+GGG | + | chr3.4:70665840-70665859 | None:intergenic | 35.0% | |
| AATTACAGAAGGAGTTGTTG+TGG | + | chr3.4:70665971-70665990 | None:intergenic | 35.0% | |
| ATCATTGAGATCGTTAGAAG+TGG | + | chr3.4:70666040-70666059 | None:intergenic | 35.0% | |
| ATTTCTTGCACTCGTTAGAA+TGG | + | chr3.4:70665693-70665712 | None:intergenic | 35.0% | |
| GATGGAACTTCAACATGATT+TGG | - | chr3.4:70665885-70665904 | MS.gene031943:intron | 35.0% | |
| TAAGGTGCAAATAAGCAATC+TGG | + | chr3.4:70665667-70665686 | None:intergenic | 35.0% | |
| TATAACAATTACCGGAACCA+TGG | + | chr3.4:70666263-70666282 | None:intergenic | 35.0% | |
| TATGTTGCAAAGGAAGATGA+TGG | - | chr3.4:70665867-70665886 | MS.gene031943:intron | 35.0% | |
| TTTGGGTCGAAATGAAACAA+TGG | - | chr3.4:70666089-70666108 | MS.gene031943:CDS | 35.0% | |
| ! | GCGATATGATTTTTCACTGT+TGG | - | chr3.4:70666343-70666362 | MS.gene031943:CDS | 35.0% |
| !!! | GTGTCTTCTCTTTGTTTTTC+TGG | + | chr3.4:70665775-70665794 | None:intergenic | 35.0% |
| AGGCTTAAAGACCCAGTTTA+TGG | - | chr3.4:70665826-70665845 | MS.gene031943:intron | 40.0% | |
| CACTCGTTAGAATGGAAGTA+AGG | + | chr3.4:70665685-70665704 | None:intergenic | 40.0% | |
| CTTCCTTTGCAACATAGCTA+TGG | + | chr3.4:70665863-70665882 | None:intergenic | 40.0% | |
| GAACCAATGCATCCATAAAC+TGG | + | chr3.4:70665841-70665860 | None:intergenic | 40.0% | |
| GAAGTGGAAAACTCAGGAAA+TGG | + | chr3.4:70666024-70666043 | None:intergenic | 40.0% | |
| GTTCCATAGCTATGTTGCAA+AGG | - | chr3.4:70665857-70665876 | MS.gene031943:intron | 40.0% | |
| TCGTTAGAAGTGGAAAACTC+AGG | + | chr3.4:70666030-70666049 | None:intergenic | 40.0% | |
| TTGCTTATGAAGCAGAAGCA+AGG | - | chr3.4:70665806-70665825 | MS.gene031943:intron | 40.0% | |
| ! | ACATGATTTGGCCATTGCTA+AGG | - | chr3.4:70665897-70665916 | MS.gene031943:intron | 40.0% |
| ! | GGCTCTTCTTCGCAATTTTT+GGG | - | chr3.4:70666072-70666091 | MS.gene031943:CDS | 40.0% |
| ! | TGGCTCTTCTTCGCAATTTT+TGG | - | chr3.4:70666071-70666090 | MS.gene031943:CDS | 40.0% |
| AGCAAGACGTTCCTTAGCAA+TGG | + | chr3.4:70665911-70665930 | None:intergenic | 45.0% | |
| GACCCAGTTTATGGATGCAT+TGG | - | chr3.4:70665835-70665854 | MS.gene031943:intron | 45.0% | |
| GTGGAAAACTCAGGAAATGG+AGG | + | chr3.4:70666021-70666040 | None:intergenic | 45.0% | |
| TACAGAAGGAGTTGTTGTGG+TGG | + | chr3.4:70665968-70665987 | None:intergenic | 45.0% | |
| GCACAAGATGAGCTTGAACG+TGG | + | chr3.4:70665613-70665632 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 70665586 | 70666382 | 70665586 | ID=MS.gene031943 |
| chr3.4 | mRNA | 70665586 | 70666382 | 70665586 | ID=MS.gene031943.t1;Parent=MS.gene031943 |
| chr3.4 | exon | 70665984 | 70666382 | 70665984 | ID=MS.gene031943.t1.exon1;Parent=MS.gene031943.t1 |
| chr3.4 | CDS | 70665984 | 70666382 | 70665984 | ID=cds.MS.gene031943.t1;Parent=MS.gene031943.t1 |
| chr3.4 | exon | 70665586 | 70665624 | 70665586 | ID=MS.gene031943.t1.exon2;Parent=MS.gene031943.t1 |
| chr3.4 | CDS | 70665586 | 70665624 | 70665586 | ID=cds.MS.gene031943.t1;Parent=MS.gene031943.t1 |
| Gene Sequence |
| Protein sequence |
