AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene032015

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032015.t1 MTR_3g070030 86.316 190 26 0 1 190 1 190 3.56e-123 352
MS.gene032015.t1 MTR_7g011130 76.279 215 37 2 1 203 1 213 8.10e-116 333
MS.gene032015.t1 MTR_3g070040 83.333 180 26 2 12 190 1 177 1.64e-108 314
MS.gene032015.t1 MTR_7g011120 80.447 179 29 1 12 184 1 179 1.27e-104 304
MS.gene032015.t1 MTR_6g012670 68.539 178 55 1 1 178 2 178 7.19e-84 251
MS.gene032015.t1 MTR_4g108760 69.942 173 50 2 5 176 2 173 2.55e-82 249
MS.gene032015.t1 MTR_3g435150 66.860 172 56 1 5 176 2 172 1.45e-77 234
MS.gene032015.t1 MTR_2g078700 69.620 158 45 2 19 174 23 179 1.03e-75 233
MS.gene032015.t1 MTR_6g032770 62.130 169 61 2 14 180 13 180 5.22e-73 226
MS.gene032015.t1 MTR_7g085260 56.436 202 76 3 5 202 3 196 8.52e-73 225
MS.gene032015.t1 MTR_6g084430 64.557 158 51 2 19 176 5 157 1.84e-69 215
MS.gene032015.t1 MTR_1g008740 61.818 165 56 3 19 180 13 173 2.45e-67 210
MS.gene032015.t1 MTR_1g008740 61.818 165 56 3 19 180 27 187 3.20e-67 210
MS.gene032015.t1 MTR_3g109340 60.625 160 57 2 19 176 22 177 5.10e-66 207
MS.gene032015.t1 MTR_3g109340 60.000 160 57 2 19 176 22 176 8.80e-65 204
MS.gene032015.t1 MTR_3g116070 63.333 150 51 3 7 153 12 160 4.89e-62 197
MS.gene032015.t1 MTR_4g035590 51.852 189 75 5 20 202 9 187 7.29e-56 181
MS.gene032015.t1 MTR_8g059170 51.553 161 77 1 16 176 11 170 9.43e-56 180
MS.gene032015.t1 MTR_4g036030 50.857 175 76 4 20 189 8 177 2.23e-55 179
MS.gene032015.t1 MTR_2g064470 55.422 166 66 4 7 171 1 159 6.52e-55 177
MS.gene032015.t1 MTR_5g012080 49.714 175 80 3 19 189 7 177 6.63e-55 178
MS.gene032015.t1 MTR_8g094580 47.959 196 89 5 17 203 5 196 7.32e-55 176
MS.gene032015.t1 MTR_7g100990 48.168 191 89 3 11 198 3 186 9.44e-55 177
MS.gene032015.t1 MTR_4g101680 54.140 157 58 3 20 170 8 156 1.29e-54 178
MS.gene032015.t1 MTR_3g088110 50.000 162 80 1 16 177 4 164 1.79e-54 175
MS.gene032015.t1 MTR_5g041940 51.875 160 76 1 17 175 1 160 1.93e-54 174
MS.gene032015.t1 MTR_1g069805 50.909 165 69 3 19 181 10 164 2.36e-54 174
MS.gene032015.t1 MTR_3g096920 52.903 155 72 1 16 170 4 157 2.54e-54 175
MS.gene032015.t1 MTR_8g024480 49.171 181 82 3 14 184 10 190 7.24e-54 178
MS.gene032015.t1 MTR_2g079990 50.932 161 76 1 16 176 13 170 1.83e-53 174
MS.gene032015.t1 MTR_4g081870 50.588 170 79 2 18 182 8 177 1.88e-53 172
MS.gene032015.t1 MTR_3g093040 50.595 168 71 3 17 175 106 270 7.05e-53 172
MS.gene032015.t1 MTR_2g062730 51.829 164 70 4 16 175 7 165 1.32e-52 172
MS.gene032015.t1 MTR_7g085220 48.555 173 79 2 12 174 1 173 2.54e-52 171
MS.gene032015.t1 MTR_1g096430 46.486 185 81 5 12 190 1 173 1.81e-51 169
MS.gene032015.t1 MTR_7g097090 51.974 152 64 2 19 168 10 154 2.11e-51 167
MS.gene032015.t1 MTR_8g076110 51.948 154 66 3 20 170 7 155 4.80e-51 167
MS.gene032015.t1 MTR_6g477900 52.229 157 70 2 17 171 4 157 4.97e-51 165
MS.gene032015.t1 MTR_3g093050 53.846 156 67 2 19 172 22 174 5.99e-51 173
MS.gene032015.t1 MTR_5g021710 44.330 194 100 3 12 202 1 189 1.05e-50 167
MS.gene032015.t1 MTR_3g093050 53.846 156 67 2 19 172 22 174 1.24e-50 173
MS.gene032015.t1 MTR_2g080010 45.556 180 86 3 15 184 11 188 2.30e-50 167
MS.gene032015.t1 MTR_2g064090 52.532 158 63 3 19 170 6 157 2.41e-50 166
MS.gene032015.t1 MTR_3g096920 58.915 129 52 1 16 144 4 131 5.86e-50 165
MS.gene032015.t1 MTR_5g069030 51.205 166 69 3 19 175 25 187 9.19e-50 171
MS.gene032015.t1 MTR_3g096140 44.565 184 95 4 12 193 1 179 1.84e-49 162
MS.gene032015.t1 MTR_2157s0010 48.810 168 77 2 12 170 1 168 3.14e-49 161
MS.gene032015.t1 MTR_8g063550 45.556 180 91 4 20 197 8 182 3.81e-49 163
MS.gene032015.t1 MTR_2g079990 57.364 129 55 0 16 144 13 141 4.35e-49 164
MS.gene032015.t1 MTR_5g076850 47.429 175 87 2 17 189 4 175 4.81e-49 169
MS.gene032015.t1 MTR_3g064580 48.214 168 83 2 17 182 4 169 7.68e-49 169
MS.gene032015.t1 MTR_4g089135 45.763 177 74 3 19 173 15 191 9.47e-49 162
MS.gene032015.t1 MTR_7g005280 50.575 174 69 6 13 183 9 168 1.41e-48 159
MS.gene032015.t1 MTR_3g096140 44.565 184 95 4 12 193 1 179 2.00e-48 162
MS.gene032015.t1 MTR_8g063550 45.556 180 91 4 20 197 8 182 2.04e-48 164
MS.gene032015.t1 MTR_2g093810 50.968 155 73 2 19 170 14 168 2.29e-48 160
MS.gene032015.t1 MTR_8g063550 45.556 180 91 4 20 197 8 182 3.49e-48 163
MS.gene032015.t1 MTR_8g467490 45.029 171 85 3 15 177 11 180 1.68e-46 157
MS.gene032015.t1 MTR_5g014300 43.523 193 94 3 17 200 4 190 1.84e-46 156
MS.gene032015.t1 MTR_8g093580 44.444 180 93 4 20 197 8 182 1.94e-46 159
MS.gene032015.t1 MTR_6g011860 46.243 173 79 5 11 172 6 175 2.63e-46 157
MS.gene032015.t1 MTR_5g040420 46.471 170 83 4 15 177 11 179 5.03e-46 156
MS.gene032015.t1 MTR_1g097300 48.000 175 80 5 20 190 21 188 1.82e-45 158
MS.gene032015.t1 MTR_1g090723 47.701 174 82 5 20 190 10 177 3.61e-45 157
MS.gene032015.t1 MTR_4g098630 42.132 197 101 4 15 201 2 195 4.26e-45 152
MS.gene032015.t1 MTR_0036s0150 48.276 174 81 5 20 190 7 174 4.41e-45 157
MS.gene032015.t1 MTR_1g090723 47.701 174 83 5 20 190 10 178 4.51e-45 158
MS.gene032015.t1 MTR_1g090723 47.701 174 82 5 20 190 10 177 5.42e-45 157
MS.gene032015.t1 MTR_2g068920 41.969 193 95 6 1 177 1 192 8.11e-43 145
MS.gene032015.t1 MTR_2g086880 55.200 125 54 2 19 142 19 142 9.82e-43 151
MS.gene032015.t1 MTR_2g086880 55.200 125 54 2 19 142 19 142 1.14e-42 150
MS.gene032015.t1 MTR_5g090970 44.068 177 88 4 9 176 10 184 1.40e-42 145
MS.gene032015.t1 MTR_2g068880 43.299 194 91 7 1 177 1 192 3.10e-42 144
MS.gene032015.t1 MTR_4g134460 47.097 155 75 3 17 170 53 201 4.25e-42 147
MS.gene032015.t1 MTR_1g090720 46.857 175 86 4 20 189 44 216 7.46e-42 147
MS.gene032015.t1 MTR_5g090970 44.068 177 87 5 9 176 10 183 9.87e-41 140
MS.gene032015.t1 MTR_3g096140 43.478 161 85 3 35 193 2 158 1.40e-40 141
MS.gene032015.t1 MTR_4g075980 45.695 151 75 3 1 148 1 147 5.73e-39 135
MS.gene032015.t1 MTR_8g099750 40.909 176 93 4 12 183 7 175 9.62e-38 130
MS.gene032015.t1 MTR_8g023840 54.962 131 51 5 18 142 10 138 5.22e-37 133
MS.gene032015.t1 MTR_3g098810 40.964 166 89 4 12 170 7 170 7.84e-36 126
MS.gene032015.t1 MTR_8g023860 53.488 129 52 5 20 142 13 139 2.52e-35 129
MS.gene032015.t1 MTR_8g094580 47.260 146 64 5 67 203 1 142 1.47e-34 122
MS.gene032015.t1 MTR_3g098810 43.796 137 71 2 12 144 7 141 1.24e-33 118
MS.gene032015.t1 MTR_2g086690 41.667 156 84 4 20 168 5 160 4.99e-33 119
MS.gene032015.t1 MTR_4g052620 39.490 157 87 4 19 168 5 160 3.19e-32 117
MS.gene032015.t1 MTR_8g023900 39.153 189 88 8 23 194 197 375 1.90e-30 116
MS.gene032015.t1 MTR_8g023900 47.287 129 62 4 19 142 12 139 4.72e-29 112
MS.gene032015.t1 MTR_8g023930 49.231 130 58 5 19 142 24 151 3.89e-30 115
MS.gene032015.t1 MTR_7g105170 38.012 171 93 6 19 178 4 172 1.54e-29 110
MS.gene032015.t1 MTR_4g094302 36.310 168 94 3 19 181 11 170 3.92e-28 105
MS.gene032015.t1 MTR_4g094302 39.844 128 67 2 19 144 11 130 3.92e-26 99.0
MS.gene032015.t1 MTR_8g023880 43.357 143 59 6 19 142 7 146 5.91e-26 101
MS.gene032015.t1 MTR_7g070140 48.936 94 43 2 72 160 17 110 1.81e-24 94.0
MS.gene032015.t1 MTR_3g096400 36.747 166 86 6 15 169 3 160 5.50e-21 86.7
MS.gene032015.t1 MTR_8g093790 37.013 154 74 5 17 170 8 138 7.20e-20 83.2
MS.gene032015.t1 MTR_7g083360 34.328 134 82 5 12 142 3 133 2.86e-17 75.9
MS.gene032015.t1 MTR_2g014680 31.148 183 102 5 2 168 36 210 2.31e-14 70.5
MS.gene032015.t1 MTR_7g083330 31.034 145 93 6 1 142 1 141 8.90e-14 67.4
MS.gene032015.t1 MTR_4g078875 31.081 148 84 4 14 144 43 189 3.14e-13 67.0
MS.gene032015.t1 MTR_7g083370 29.286 140 93 4 14 150 5 141 3.22e-12 62.0
MS.gene032015.t1 MTR_7g070150 43.836 73 29 2 111 180 4 67 5.00e-12 60.1
MS.gene032015.t1 MTR_1g093680 30.526 190 106 9 7 178 46 227 4.64e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032015.t1 AT5G61430 64.737 190 60 2 13 202 10 192 3.50e-81 245
MS.gene032015.t1 AT5G07680 68.675 166 51 1 11 176 9 173 2.95e-79 240
MS.gene032015.t1 AT5G07680 70.000 160 47 1 17 176 1 159 8.22e-78 236
MS.gene032015.t1 AT3G29035 66.092 174 58 1 3 176 8 180 4.66e-77 234
MS.gene032015.t1 AT5G39610 68.293 164 51 1 13 176 14 176 1.59e-75 229
MS.gene032015.t1 AT5G53950 70.779 154 42 2 19 170 17 169 6.45e-74 228
MS.gene032015.t1 AT3G04060 64.848 165 56 2 7 170 8 171 3.91e-72 222
MS.gene032015.t1 AT5G18270 66.667 159 51 2 15 172 17 174 6.37e-72 221
MS.gene032015.t1 AT5G18270 66.667 159 51 2 15 172 17 174 7.58e-72 221
MS.gene032015.t1 AT3G18400 63.924 158 53 1 19 176 5 158 2.09e-71 219
MS.gene032015.t1 AT2G24430 59.770 174 64 2 5 176 2 171 3.16e-68 211
MS.gene032015.t1 AT2G24430 59.770 174 64 2 5 176 2 171 3.16e-68 211
MS.gene032015.t1 AT3G15170 64.780 159 52 3 11 167 13 169 3.30e-68 211
MS.gene032015.t1 AT1G76420 58.621 174 64 3 1 170 2 171 1.04e-64 203
MS.gene032015.t1 AT3G12977 51.250 160 76 1 19 178 18 175 8.93e-58 183
MS.gene032015.t1 AT1G56010 48.045 179 84 3 1 174 1 175 4.35e-57 183
MS.gene032015.t1 AT4G10350 49.749 199 84 3 20 205 10 205 1.20e-55 180
MS.gene032015.t1 AT1G12260 50.000 176 77 4 20 189 8 178 2.04e-55 179
MS.gene032015.t1 AT2G46770 48.571 175 77 2 14 175 11 185 2.79e-55 179
MS.gene032015.t1 AT1G12260 50.000 176 77 4 20 189 8 178 5.12e-55 180
MS.gene032015.t1 AT1G77450 50.311 161 79 1 17 177 8 167 1.71e-54 174
MS.gene032015.t1 AT4G35580 54.487 156 66 2 19 172 9 161 2.19e-54 181
MS.gene032015.t1 AT4G35580 54.487 156 66 2 19 172 9 161 3.40e-54 181
MS.gene032015.t1 AT4G35580 54.487 156 66 2 19 172 9 161 3.63e-54 181
MS.gene032015.t1 AT1G52890 50.000 176 82 3 16 188 11 183 7.60e-54 174
MS.gene032015.t1 AT3G15500 51.852 162 75 2 16 177 11 169 9.33e-54 174
MS.gene032015.t1 AT5G61430 72.727 110 29 1 67 176 1 109 1.36e-53 172
MS.gene032015.t1 AT1G01720 49.091 165 82 2 14 177 2 165 1.46e-53 173
MS.gene032015.t1 AT4G27410 50.909 165 72 3 16 177 11 169 2.20e-53 173
MS.gene032015.t1 AT1G62700 48.087 183 76 4 18 189 6 180 4.30e-53 175
MS.gene032015.t1 AT1G62700 48.087 183 76 4 18 189 6 180 4.30e-53 175
MS.gene032015.t1 AT1G33280 54.717 159 63 3 20 175 9 161 7.77e-53 172
MS.gene032015.t1 AT5G08790 50.920 163 77 2 16 176 4 165 1.22e-52 171
MS.gene032015.t1 AT1G61110 46.961 181 86 3 5 175 2 182 2.23e-52 171
MS.gene032015.t1 AT1G33060 55.195 154 64 2 19 170 24 174 3.49e-52 177
MS.gene032015.t1 AT1G33060 55.195 154 64 2 19 170 24 174 3.81e-52 177
MS.gene032015.t1 AT3G61910 47.429 175 79 4 14 175 6 180 6.08e-52 170
MS.gene032015.t1 AT3G04070 51.744 172 72 4 13 174 4 174 6.77e-52 170
MS.gene032015.t1 AT2G18060 48.503 167 78 3 15 178 5 166 8.38e-52 171
MS.gene032015.t1 AT2G18060 48.503 167 78 3 15 178 5 166 8.38e-52 171
MS.gene032015.t1 AT5G63790 50.292 171 75 4 11 176 43 208 3.98e-51 167
MS.gene032015.t1 AT5G63790 50.292 171 75 4 11 176 53 218 4.83e-51 167
MS.gene032015.t1 AT5G66300 50.318 157 71 2 19 172 12 164 5.57e-51 166
MS.gene032015.t1 AT4G36160 50.625 160 71 3 14 170 5 159 6.04e-51 169
MS.gene032015.t1 AT4G36160 50.625 160 71 3 14 170 5 159 6.04e-51 169
MS.gene032015.t1 AT4G36160 50.625 160 71 3 14 170 9 163 6.69e-51 169
MS.gene032015.t1 AT1G32770 47.191 178 84 2 14 181 11 188 1.01e-50 167
MS.gene032015.t1 AT1G71930 49.677 155 70 3 19 170 9 158 1.16e-50 167
MS.gene032015.t1 AT1G71930 49.677 155 70 3 19 170 9 158 1.16e-50 167
MS.gene032015.t1 AT3G17730 50.955 157 72 2 17 171 4 157 1.17e-50 164
MS.gene032015.t1 AT1G65910 47.059 187 88 4 17 196 4 186 1.58e-50 173
MS.gene032015.t1 AT5G62380 46.995 183 80 5 19 189 7 184 1.94e-50 167
MS.gene032015.t1 AT5G62380 46.995 183 80 5 19 189 7 184 1.94e-50 167
MS.gene032015.t1 AT3G03200 54.140 157 66 3 17 170 4 157 4.70e-50 169
MS.gene032015.t1 AT1G79580 52.174 161 67 4 16 172 14 168 1.42e-49 165
MS.gene032015.t1 AT1G79580 52.174 161 67 4 16 172 14 168 1.42e-49 165
MS.gene032015.t1 AT1G79580 52.174 161 67 4 16 172 14 168 1.42e-49 165
MS.gene032015.t1 AT1G79580 52.174 161 67 4 16 172 14 168 1.42e-49 165
MS.gene032015.t1 AT1G79580 52.174 161 67 4 16 172 14 168 1.42e-49 165
MS.gene032015.t1 AT1G54330 51.515 165 72 2 17 179 4 162 1.81e-49 163
MS.gene032015.t1 AT3G04070 45.455 187 77 3 13 174 4 190 2.47e-49 164
MS.gene032015.t1 AT5G17260 53.503 157 67 3 17 170 4 157 2.48e-49 167
MS.gene032015.t1 AT1G69490 50.000 158 78 1 19 175 9 166 3.96e-49 161
MS.gene032015.t1 AT3G10480 50.575 174 75 5 20 189 29 195 8.96e-49 165
MS.gene032015.t1 AT4G27410 46.154 182 72 4 16 177 11 186 9.52e-49 161
MS.gene032015.t1 AT5G04410 48.571 175 79 5 20 190 11 178 1.17e-48 167
MS.gene032015.t1 AT3G15510 46.154 169 81 2 23 181 21 189 1.88e-48 162
MS.gene032015.t1 AT3G10490 50.289 173 78 5 20 189 29 196 3.08e-48 158
MS.gene032015.t1 AT4G28530 46.199 171 67 3 18 170 9 172 3.25e-48 161
MS.gene032015.t1 AT3G10480 50.286 175 75 5 20 189 29 196 3.65e-48 163
MS.gene032015.t1 AT3G10500 47.929 169 81 4 20 186 11 174 6.88e-48 164
MS.gene032015.t1 AT2G27300 56.589 129 54 2 19 146 15 142 9.01e-48 159
MS.gene032015.t1 AT1G26870 45.946 185 89 4 1 177 1 182 1.03e-47 161
MS.gene032015.t1 AT5G64060 44.571 175 90 4 20 192 8 177 2.50e-47 159
MS.gene032015.t1 AT2G33480 51.948 154 66 3 17 170 13 158 2.88e-47 156
MS.gene032015.t1 AT2G33480 51.613 155 67 3 17 170 13 160 3.04e-47 156
MS.gene032015.t1 AT2G43000 42.353 170 95 2 1 170 1 167 4.75e-47 156
MS.gene032015.t1 AT3G10490 50.289 173 78 5 20 189 29 196 5.28e-47 160
MS.gene032015.t1 AT5G39820 44.086 186 83 4 8 173 10 194 2.33e-46 156
MS.gene032015.t1 AT3G49530 47.953 171 77 5 4 170 2 164 3.06e-46 157
MS.gene032015.t1 AT5G46590 48.718 156 75 3 19 171 6 159 5.98e-46 154
MS.gene032015.t1 AT3G49530 47.953 171 77 5 4 170 2 164 8.62e-46 157
MS.gene032015.t1 AT5G09330 42.373 177 96 3 16 190 3 175 8.79e-46 158
MS.gene032015.t1 AT5G09330 42.373 177 96 3 16 190 3 175 8.79e-46 158
MS.gene032015.t1 AT5G09330 42.373 177 96 3 16 190 3 175 8.79e-46 158
MS.gene032015.t1 AT5G09330 42.373 177 96 3 16 190 3 175 8.79e-46 158
MS.gene032015.t1 AT5G09330 42.373 177 96 3 16 190 3 175 8.79e-46 158
MS.gene032015.t1 AT5G13180 46.707 167 80 3 12 176 7 166 1.21e-45 152
MS.gene032015.t1 AT1G52880 46.341 164 79 2 23 177 21 184 2.31e-45 153
MS.gene032015.t1 AT5G46590 51.471 136 63 2 19 151 6 141 7.01e-45 150
MS.gene032015.t1 AT5G24590 47.771 157 76 3 19 172 13 166 3.17e-44 153
MS.gene032015.t1 AT5G22290 49.645 141 68 3 12 151 16 154 3.42e-43 148
MS.gene032015.t1 AT2G02450 47.712 153 73 3 19 170 52 198 4.54e-43 148
MS.gene032015.t1 AT2G02450 47.712 153 73 3 19 170 52 198 5.48e-43 149
MS.gene032015.t1 AT3G10480 42.788 208 74 5 20 189 29 229 2.37e-42 149
MS.gene032015.t1 AT1G32510 45.963 161 76 3 19 170 6 164 2.90e-42 144
MS.gene032015.t1 AT1G34180 41.799 189 103 4 16 202 14 197 2.93e-42 147
MS.gene032015.t1 AT4G17980 52.308 130 58 2 19 144 6 135 3.65e-42 143
MS.gene032015.t1 AT1G34190 44.068 177 92 4 16 190 14 185 4.07e-42 149
MS.gene032015.t1 AT3G44290 50.758 132 63 2 19 149 15 145 6.54e-42 141
MS.gene032015.t1 AT4G17980 52.308 130 58 2 19 144 6 135 8.46e-42 143
MS.gene032015.t1 AT1G34180 41.799 189 103 4 16 202 14 197 1.65e-41 147
MS.gene032015.t1 AT2G17040 50.000 134 63 2 17 147 5 137 5.73e-41 140
MS.gene032015.t1 AT3G44290 50.758 132 63 2 19 149 15 145 1.18e-40 141
MS.gene032015.t1 AT1G34180 39.303 201 103 4 16 202 14 209 2.22e-40 143
MS.gene032015.t1 AT1G34180 39.303 201 103 4 16 202 14 209 9.38e-40 143
MS.gene032015.t1 AT3G12910 42.697 178 86 6 13 176 16 191 9.97e-39 135
MS.gene032015.t1 AT3G12977 54.783 115 50 1 64 178 10 122 6.18e-38 131
MS.gene032015.t1 AT1G56010 56.250 112 41 2 67 174 1 108 1.54e-37 131
MS.gene032015.t1 AT4G10350 47.742 155 65 3 64 205 7 158 1.51e-35 127
MS.gene032015.t1 AT1G32870 45.665 173 79 6 20 186 12 175 1.81e-35 130
MS.gene032015.t1 AT1G32870 45.665 173 79 6 20 186 12 175 1.90e-35 130
MS.gene032015.t1 AT1G32870 45.665 173 79 6 20 186 48 211 2.26e-35 130
MS.gene032015.t1 AT5G04395 42.857 154 70 3 12 147 19 172 3.03e-31 112
MS.gene032015.t1 AT2G33480 56.000 100 39 2 72 170 8 103 5.33e-31 113
MS.gene032015.t1 AT5G22380 37.640 178 103 5 23 193 9 185 2.24e-30 112
MS.gene032015.t1 AT4G28530 45.872 109 43 1 18 110 9 117 6.74e-29 110
MS.gene032015.t1 AT3G44350 44.094 127 65 4 23 143 9 135 3.16e-28 104
MS.gene032015.t1 AT3G44350 44.094 127 65 4 23 143 9 135 1.39e-27 105
MS.gene032015.t1 AT4G01550 46.094 128 63 3 23 144 8 135 2.00e-27 108
MS.gene032015.t1 AT1G02230 44.615 130 62 4 20 142 4 130 3.15e-27 106
MS.gene032015.t1 AT3G04420 40.769 130 73 2 17 142 1 130 1.10e-25 101
MS.gene032015.t1 AT3G04420 40.769 130 73 2 17 142 1 130 1.69e-25 101
MS.gene032015.t1 AT4G01520 40.152 132 72 4 20 144 5 136 1.24e-24 98.6
MS.gene032015.t1 AT3G10490 53.535 99 41 3 92 189 2 96 1.37e-24 99.4
MS.gene032015.t1 AT3G10490 53.535 99 41 3 92 189 2 96 1.37e-24 99.4
MS.gene032015.t1 AT4G01540 41.085 129 69 4 23 144 8 136 9.29e-24 97.4
MS.gene032015.t1 AT4G01540 41.085 129 69 4 23 144 8 136 1.31e-23 97.4
MS.gene032015.t1 AT4G01540 40.741 135 61 5 23 144 8 136 1.64e-23 97.4
MS.gene032015.t1 AT4G01540 41.085 129 69 4 23 144 8 136 1.69e-23 97.1
MS.gene032015.t1 AT5G64530 33.908 174 87 7 19 178 3 162 1.77e-23 92.8
MS.gene032015.t1 AT5G64530 36.641 131 67 5 17 144 1 118 7.89e-22 87.8
MS.gene032015.t1 AT1G02250 40.000 130 68 4 20 142 4 130 1.20e-21 91.3
MS.gene032015.t1 AT1G02220 38.462 130 73 3 17 142 1 127 2.22e-21 90.9
MS.gene032015.t1 AT2G18060 50.000 82 36 2 97 178 2 78 1.45e-20 87.0
MS.gene032015.t1 AT5G14000 30.556 180 114 4 7 183 3 174 2.22e-19 82.4
MS.gene032015.t1 AT1G01010 37.324 142 73 5 23 152 7 144 2.61e-19 85.5
MS.gene032015.t1 AT2G43000 41.758 91 51 1 80 170 1 89 2.62e-19 82.0
MS.gene032015.t1 AT5G14000 32.394 142 92 2 7 146 3 142 3.69e-18 78.2
MS.gene032015.t1 AT3G56530 30.000 150 102 2 19 165 52 201 2.63e-17 79.0
MS.gene032015.t1 AT5G22290 57.407 54 23 0 98 151 2 55 7.68e-17 76.6
MS.gene032015.t1 AT3G04430 36.154 130 71 3 25 142 6 135 4.31e-16 73.6
MS.gene032015.t1 AT5G50820 33.553 152 73 7 6 144 2 138 5.52e-16 73.2
MS.gene032015.t1 AT1G28470 30.857 175 94 7 19 174 77 243 5.83e-14 69.3
MS.gene032015.t1 AT3G55210 30.872 149 86 4 19 153 11 156 1.74e-13 67.8
MS.gene032015.t1 AT5G18300 36.090 133 67 6 21 147 16 136 4.07e-13 64.7
MS.gene032015.t1 AT4G28500 30.682 176 94 7 19 174 59 226 6.53e-12 63.5

Find 43 sgRNAs with CRISPR-Local

Find 162 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAAGGTAAATGCATTAAT+TGG 0.096517 3.1:-57389696 MS.gene032015:CDS
AAATGAAAAGGTCGAATTTC+CGG 0.216715 3.1:-57390878 MS.gene032015:CDS
GAGCTACTAATGCTGGATAT+TGG 0.349984 3.1:-57389746 MS.gene032015:CDS
AATGAAAAGGTCGAATTTCC+GGG 0.351715 3.1:-57390877 MS.gene032015:CDS
TCCAGCATTAGTAGCTCTAT+TGG 0.388516 3.1:+57389752 None:intergenic
AGCATAATTGTGGAAAGAAA+AGG 0.396360 3.1:-57388602 MS.gene032015:CDS
TCAAGGTAAATGCATTAATT+GGG 0.407011 3.1:-57389695 MS.gene032015:CDS
TATTGGTCCTTTGACCAGTT+GGG 0.417126 3.1:+57389769 None:intergenic
CGAGTGGTGAAAAGACCAAT+TGG 0.426528 3.1:-57389635 MS.gene032015:CDS
CTATTGGTCCTTTGACCAGT+TGG 0.441493 3.1:+57389768 None:intergenic
ACCAATAGAGCTACTAATGC+TGG 0.453301 3.1:-57389753 MS.gene032015:CDS
GCATAATTGTGGAAAGAAAA+GGG 0.463486 3.1:-57388601 MS.gene032015:CDS
GCTGGATATTGGAAAGCAAC+AGG 0.464158 3.1:-57389735 MS.gene032015:CDS
TTATTCAGAGATGGCTAAGA+TGG 0.464239 3.1:-57389835 MS.gene032015:intron
GAATTGTCATCAGCTTCTAC+TGG 0.476260 3.1:-57388124 MS.gene032015:CDS
GTATTCATGCATGACCCAAT+TGG 0.496635 3.1:+57389620 None:intergenic
AGGGAGAGAAAATACCCAAC+TGG 0.524633 3.1:-57389783 MS.gene032015:CDS
TTACCATTCCATGTGTGGAT+AGG 0.526862 3.1:+57389565 None:intergenic
ATGATTTATAAGCTCTTCAT+CGG 0.528076 3.1:+57390834 None:intergenic
TTTATAAGCTCTTCATCGGT+CGG 0.530344 3.1:+57390838 None:intergenic
AAAAGGGATGGTTCAAAACA+TGG 0.533594 3.1:-57388585 MS.gene032015:CDS
AATTGGGATGAAGAAAACAT+TGG 0.537739 3.1:-57389679 MS.gene032015:CDS
GAGTGGTGAAAAGACCAATT+GGG 0.539850 3.1:-57389634 MS.gene032015:CDS
CAACCTATCCACACATGGAA+TGG 0.547037 3.1:-57389568 MS.gene032015:intron
AATTTACCTGGCAAATCCCA+TGG 0.560572 3.1:+57390736 None:intergenic
TGTGAACCATGGGATTTGCC+AGG 0.562377 3.1:-57390742 MS.gene032015:intron
CAATATTACCATTCCATGTG+TGG 0.569497 3.1:+57389560 None:intergenic
GTCTTTGAGAAGCATAATTG+TGG 0.576940 3.1:-57388612 MS.gene032015:CDS
GGTCATGCATGAATACCGAT+TGG 0.581760 3.1:-57389613 MS.gene032015:CDS
TATTCAGAGATGGCTAAGAT+GGG 0.583546 3.1:-57389834 MS.gene032015:intron
AGAGTGTGTTACCCTCCAAT+CGG 0.588761 3.1:+57389598 None:intergenic
CATGCATGAATACCGATTGG+AGG 0.592763 3.1:-57389610 MS.gene032015:CDS
CTGGACATAATGATAGCTTG+TGG 0.595183 3.1:-57388105 MS.gene032015:CDS
GAAAATACCCAACTGGTCAA+AGG 0.598845 3.1:-57389776 MS.gene032015:CDS
CTAAGATGGGAGAAGCAGAA+TGG 0.606331 3.1:-57389821 MS.gene032015:CDS
AATTGTGGAAAGAAAAGGGA+TGG 0.607650 3.1:-57388597 MS.gene032015:CDS
ATGCATGAATACCGATTGGA+GGG 0.621001 3.1:-57389609 MS.gene032015:CDS
GGGATGGTTCAAAACATGGA+AGG 0.624676 3.1:-57388581 MS.gene032015:intron
TATGAATAAGTGTGAACCAT+GGG 0.641317 3.1:-57390752 MS.gene032015:CDS
GAGCACAACCTATCCACACA+TGG 0.663138 3.1:-57389573 MS.gene032015:CDS
ATATGAATAAGTGTGAACCA+TGG 0.681966 3.1:-57390753 MS.gene032015:CDS
GGATAGAATCGAAAACAACC+CGG 0.686902 3.1:+57390859 None:intergenic
TACATAGGAAGAGCTCCGAG+TGG 0.745847 3.1:-57389651 MS.gene032015:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAAATTAAAATAAACATAA+GGG - chr3.1:57390160-57390179 MS.gene032015:intron 10.0%
!! TGAAAATTAAAATAAACATA+AGG - chr3.1:57390159-57390178 MS.gene032015:intron 10.0%
!!! TAAGTTTTATAAAAAATCAA+TGG - chr3.1:57389734-57389753 MS.gene032015:CDS 10.0%
!!! TATAAAACTTATTTTTATGA+TGG + chr3.1:57389725-57389744 None:intergenic 10.0%
!! AAAAAAACATTAAATTTACC+TGG + chr3.1:57388291-57388310 None:intergenic 15.0%
!! AAAAAGAAAGAAAAACAATT+TGG - chr3.1:57388786-57388805 MS.gene032015:intron 15.0%
!! CCAAAAAAAAAATAGTAATA+TGG - chr3.1:57388356-57388375 MS.gene032015:intron 15.0%
!! GAAAACTAAAATAAACATAA+GGG - chr3.1:57390010-57390029 MS.gene032015:intron 15.0%
!! GAAAACTAAAATAAACATAA+GGG + chr3.1:57390029-57390010 None:intergenic 15.0%
!! TGAAAACTAAAATAAACATA+AGG - chr3.1:57390009-57390028 MS.gene032015:intron 15.0%
!! TGAAAACTAAAATAAACATA+AGG + chr3.1:57390028-57390009 None:intergenic 15.0%
!!! AATTATGCTTTCTTATTTTT+TGG - chr3.1:57389153-57389172 MS.gene032015:intron 15.0%
!!! CCATATTACTATTTTTTTTT+TGG + chr3.1:57388359-57388378 None:intergenic 15.0%
!!! GTTTATTTTAATTTTCAAGT+TGG + chr3.1:57390156-57390175 None:intergenic 15.0%
!!! TAAAGTTTTTGTCAAAATTA+CGG + chr3.1:57389589-57389608 None:intergenic 15.0%
!!! TTAGGTTTTTTAATTGATTT+TGG + chr3.1:57390204-57390223 None:intergenic 15.0%
!! ATGAAAAAGAAGAAGAAAAA+TGG - chr3.1:57388864-57388883 MS.gene032015:intron 20.0%
!! GAAAACTAAAATAAACGTAT+GGG + chr3.1:57389838-57389857 None:intergenic 20.0%
!! TCAAAAAATGGAAAATGAAA+AGG - chr3.1:57388122-57388141 MS.gene032015:CDS 20.0%
!! TGAAAACTAAAATAAACGTA+TGG + chr3.1:57389839-57389858 None:intergenic 20.0%
!! TTGAAACTTTCAAAACATAA+GGG + chr3.1:57389809-57389828 None:intergenic 20.0%
!!! GTTTATTTTAGTTTTCAAGT+CGG + chr3.1:57389801-57389782 None:intergenic 20.0%
!!! GTTTATTTTAGTTTTCAAGT+TGG - chr3.1:57389782-57389801 MS.gene032015:CDS 20.0%
!!! GTTTATTTTAGTTTTCAAGT+TGG + chr3.1:57389801-57389782 None:intergenic 20.0%
!!! TGAAAACTTTTAAAACGTAA+GGG - chr3.1:57390100-57390119 MS.gene032015:intron 20.0%
!!! TTCATTTTCCATTTTTTGAT+TGG + chr3.1:57388121-57388140 None:intergenic 20.0%
!!! TTGAAAACTTTTAAAACGTA+AGG - chr3.1:57390099-57390118 MS.gene032015:intron 20.0%
! ACACATGAATATAGTCATAT+TGG + chr3.1:57388521-57388540 None:intergenic 25.0%
! ATGATTTATAAGCTCTTCAT+CGG + chr3.1:57388181-57388200 None:intergenic 25.0%
! CAAAGAAGACTTAATTTATG+TGG - chr3.1:57388743-57388762 MS.gene032015:intron 25.0%
! CACATAAATTAAGTCTTCTT+TGG + chr3.1:57388745-57388764 None:intergenic 25.0%
! CTTGAAACTTTCAAAACATA+AGG + chr3.1:57389810-57389829 None:intergenic 25.0%
! GAAAGAAAAACAATTTGGAA+TGG - chr3.1:57388791-57388810 MS.gene032015:intron 25.0%
! GAATGTTTCCAATCAAAAAA+TGG - chr3.1:57388110-57388129 MS.gene032015:CDS 25.0%
! TCAAGGTAAATGCATTAATT+GGG - chr3.1:57389317-57389336 MS.gene032015:intron 25.0%
! TTCAAGGTAAATGCATTAAT+TGG - chr3.1:57389316-57389335 MS.gene032015:intron 25.0%
! TTGAAACTTTCAAAACGTAA+GGG - chr3.1:57390070-57390089 MS.gene032015:intron 25.0%
! TTGAAACTTTCAAAACGTAA+GGG + chr3.1:57390089-57390070 None:intergenic 25.0%
!! AATGTATGTACTATGTCTTT+TGG - chr3.1:57389117-57389136 MS.gene032015:intron 25.0%
!! CAAAGACAAAGATATTTTCA+AGG - chr3.1:57389300-57389319 MS.gene032015:intron 25.0%
!! CTAAACCAATAGTTTTCTTT+CGG - chr3.1:57390792-57390811 MS.gene032015:CDS 25.0%
!! TAAACCAATAGTTTTCTTTC+GGG - chr3.1:57390793-57390812 MS.gene032015:CDS 25.0%
!! TGATAACGACAATATTTCTA+AGG + chr3.1:57388936-57388955 None:intergenic 25.0%
!! TGGTTTTCATTAGTATTTGA+TGG + chr3.1:57390478-57390497 None:intergenic 25.0%
!!! AAAACATTGGTTTTCTACAT+AGG - chr3.1:57389346-57389365 MS.gene032015:intron 25.0%
!!! ACCTTTTTTTTTAGAGTGAA+TGG - chr3.1:57390365-57390384 MS.gene032015:intron 25.0%
!!! ATGTTTTGAAAGTTTCAAGT+TGG - chr3.1:57389811-57389830 MS.gene032015:CDS 25.0%
!!! CCTTTTTTTTTAGAGTGAAT+GGG - chr3.1:57390366-57390385 MS.gene032015:intron 25.0%
!!! CGTTTTAAAAGTTTTCAAGT+TGG + chr3.1:57390097-57390116 None:intergenic 25.0%
!!! TTTTAAAGTTATTACGAGTG+TGG - chr3.1:57389075-57389094 MS.gene032015:intron 25.0%
!!! TTTTGTTTCTCTGTTTGATT+TGG + chr3.1:57390549-57390568 None:intergenic 25.0%
!!! TTTTTTGGTTTATTCAGAGA+TGG - chr3.1:57389168-57389187 MS.gene032015:intron 25.0%
AAATCAGACATATAGTGGTT+TGG + chr3.1:57390498-57390517 None:intergenic 30.0%
AAATGAAAAGGTCGAATTTC+CGG - chr3.1:57388134-57388153 MS.gene032015:CDS 30.0%
AATTGGGATGAAGAAAACAT+TGG - chr3.1:57389333-57389352 MS.gene032015:intron 30.0%
ACAGATGAATTTGCGAAAAA+AGG - chr3.1:57388476-57388495 MS.gene032015:intron 30.0%
AGATGAATTTGCGAAAAAAG+GGG - chr3.1:57388478-57388497 MS.gene032015:intron 30.0%
AGCATAATTGTGGAAAGAAA+AGG - chr3.1:57390410-57390429 MS.gene032015:intron 30.0%
AGGTAATTCTATCAAACACA+TGG + chr3.1:57389559-57389578 None:intergenic 30.0%
ATAGATCGTCAATGAATGTT+TGG + chr3.1:57389665-57389684 None:intergenic 30.0%
ATATGAATAAGTGTGAACCA+TGG - chr3.1:57388259-57388278 MS.gene032015:intron 30.0%
CAGATGAATTTGCGAAAAAA+GGG - chr3.1:57388477-57388496 MS.gene032015:intron 30.0%
CATCAATGTTACAGATATGT+AGG + chr3.1:57388558-57388577 None:intergenic 30.0%
CCTTACACATTATGATGTAT+CGG + chr3.1:57389004-57389023 None:intergenic 30.0%
CTTGAAACTTTCAAAACGTA+AGG - chr3.1:57390069-57390088 MS.gene032015:intron 30.0%
CTTGAAACTTTCAAAACGTA+AGG + chr3.1:57390088-57390069 None:intergenic 30.0%
GCAATTATTACTTCAGCTAA+AGG + chr3.1:57390654-57390673 None:intergenic 30.0%
GCATAATTGTGGAAAGAAAA+GGG - chr3.1:57390411-57390430 MS.gene032015:intron 30.0%
GTCAAAATTACGGTAACATA+AGG + chr3.1:57389579-57389598 None:intergenic 30.0%
TATGAATAAGTGTGAACCAT+GGG - chr3.1:57388260-57388279 MS.gene032015:intron 30.0%
TCGTTATCATCTTACTTTGA+TGG - chr3.1:57388947-57388966 MS.gene032015:intron 30.0%
TTAGCTGAAGTAATAATTGC+TGG - chr3.1:57390654-57390673 MS.gene032015:intron 30.0%
TTCATCCTCTTCAAAACAAA+TGG - chr3.1:57390620-57390639 MS.gene032015:intron 30.0%
! ACAATTTGGAATGGTGATTA+CGG - chr3.1:57388800-57388819 MS.gene032015:intron 30.0%
! CAGTAGTTTCTCTAAAAGTT+AGG + chr3.1:57390222-57390241 None:intergenic 30.0%
! CCCATTCACTCTAAAAAAAA+AGG + chr3.1:57390369-57390388 None:intergenic 30.0%
! TACCAATGAAGGATGTTTTA+GGG + chr3.1:57388837-57388856 None:intergenic 30.0%
! TTTTCGCAAATTCATCTGTT+TGG + chr3.1:57388475-57388494 None:intergenic 30.0%
!! CGAAAGAAAACTATTGGTTT+AGG + chr3.1:57390794-57390813 None:intergenic 30.0%
!! CTAACTTTTAGAGAAACTAC+TGG - chr3.1:57390220-57390239 MS.gene032015:intron 30.0%
!! TTTCTCTGTTTGATTTGGAT+TGG + chr3.1:57390544-57390563 None:intergenic 30.0%
!!! AATGGTATTTTTTCTGTGTG+AGG - chr3.1:57389209-57389228 MS.gene032015:intron 30.0%
!!! ACGTTTTGAAAGTTTCAAGT+TGG + chr3.1:57389890-57389871 None:intergenic 30.0%
!!! ATGGTATTTTTTCTGTGTGA+GGG - chr3.1:57389210-57389229 MS.gene032015:intron 30.0%
!!! TGTCATCAACTTTTTTGACA+AGG + chr3.1:57388206-57388225 None:intergenic 30.0%
!!! TTTTGGCTTAATTGCATGTT+TGG + chr3.1:57390187-57390206 None:intergenic 30.0%
AAAAGGGATGGTTCAAAACA+TGG - chr3.1:57390427-57390446 MS.gene032015:intron 35.0%
AACCCTAAAACATCCTTCAT+TGG - chr3.1:57388832-57388851 MS.gene032015:intron 35.0%
AAGAAAAATGGTGACCACTA+GGG - chr3.1:57388876-57388895 MS.gene032015:intron 35.0%
AATGAAAAGGTCGAATTTCC+GGG - chr3.1:57388135-57388154 MS.gene032015:CDS 35.0%
AATGTCCTACTAAGACAAGA+CGG - chr3.1:57388701-57388720 MS.gene032015:intron 35.0%
AATTGTGGAAAGAAAAGGGA+TGG - chr3.1:57390415-57390434 MS.gene032015:intron 35.0%
ATGCAGTGTTTATTTGACTC+AGG + chr3.1:57388631-57388650 None:intergenic 35.0%
CAATATTACCATTCCATGTG+TGG + chr3.1:57389455-57389474 None:intergenic 35.0%
CAATGGCTTAATTGCATGTT+TGG - chr3.1:57389751-57389770 MS.gene032015:CDS 35.0%
CCAGATCTAATCAATGACTT+TGG + chr3.1:57388584-57388603 None:intergenic 35.0%
CCGATACATCATAATGTGTA+AGG - chr3.1:57389001-57389020 MS.gene032015:intron 35.0%
GAGAGAAATCAGACATATAG+TGG + chr3.1:57390503-57390522 None:intergenic 35.0%
GATATCTCATCTGTGGTATA+TGG - chr3.1:57390831-57390850 MS.gene032015:CDS 35.0%
TATTCAGAGATGGCTAAGAT+GGG - chr3.1:57389178-57389197 MS.gene032015:intron 35.0%
TCATCTGTGGTATATGGAAA+TGG - chr3.1:57390837-57390856 MS.gene032015:CDS 35.0%
TTATTCAGAGATGGCTAAGA+TGG - chr3.1:57389177-57389196 MS.gene032015:intron 35.0%
TTTATAAGCTCTTCATCGGT+CGG + chr3.1:57388177-57388196 None:intergenic 35.0%
! CAATTTGGAATGGTGATTAC+GGG - chr3.1:57388801-57388820 MS.gene032015:intron 35.0%
! CCAAAGTCATTGATTAGATC+TGG - chr3.1:57388581-57388600 MS.gene032015:intron 35.0%
! CTACCAATGAAGGATGTTTT+AGG + chr3.1:57388838-57388857 None:intergenic 35.0%
! GTCTTTGAGAAGCATAATTG+TGG - chr3.1:57390400-57390419 MS.gene032015:intron 35.0%
! TTGGTTTAGGCTTTGTATTG+AGG + chr3.1:57390781-57390800 None:intergenic 35.0%
!! ATGGAAATGGCTTGTTTCAA+AGG - chr3.1:57390850-57390869 MS.gene032015:CDS 35.0%
!!! CACATCCATTTGTTTTGAAG+AGG + chr3.1:57390628-57390647 None:intergenic 35.0%
AATTCCTGACCATTGAGGTT+TGG + chr3.1:57390686-57390705 None:intergenic 40.0%
AATTTACCTGGCAAATCCCA+TGG + chr3.1:57388279-57388298 None:intergenic 40.0%
ACATCCTTCATTGGTAGATC+TGG - chr3.1:57388841-57388860 MS.gene032015:intron 40.0%
ACCAATAGAGCTACTAATGC+TGG - chr3.1:57389259-57389278 MS.gene032015:intron 40.0%
CAACATGACACTATCAGATG+TGG - chr3.1:57389033-57389052 MS.gene032015:intron 40.0%
CAAGTCGGTCCAAAACATAA+GGG + chr3.1:57389991-57390010 None:intergenic 40.0%
CTCAAGAACAATCACTGTTG+AGG - chr3.1:57390724-57390743 MS.gene032015:intron 40.0%
CTCTCCCGAAAGAAAACTAT+TGG + chr3.1:57390800-57390819 None:intergenic 40.0%
CTGGACATAATGATAGCTTG+TGG - chr3.1:57390907-57390926 MS.gene032015:CDS 40.0%
CTGTTGGAGAATGAGAATCT+TGG - chr3.1:57390750-57390769 MS.gene032015:CDS 40.0%
GAAAATACCCAACTGGTCAA+AGG - chr3.1:57389236-57389255 MS.gene032015:intron 40.0%
GAAGAAAAATGGTGACCACT+AGG - chr3.1:57388875-57388894 MS.gene032015:intron 40.0%
GAATTGTCATCAGCTTCTAC+TGG - chr3.1:57390888-57390907 MS.gene032015:CDS 40.0%
GAGCTACTAATGCTGGATAT+TGG - chr3.1:57389266-57389285 MS.gene032015:intron 40.0%
GAGTGGTGAAAAGACCAATT+GGG - chr3.1:57389378-57389397 MS.gene032015:intron 40.0%
GGATAGAATCGAAAACAACC+CGG + chr3.1:57388156-57388175 None:intergenic 40.0%
GTATTCATGCATGACCCAAT+TGG + chr3.1:57389395-57389414 None:intergenic 40.0%
TATTGGTCCTTTGACCAGTT+GGG + chr3.1:57389246-57389265 None:intergenic 40.0%
TCAAGTCGGTCCAAAACATA+AGG + chr3.1:57389992-57390011 None:intergenic 40.0%
TCATCCAGATCTACCAATGA+AGG + chr3.1:57388848-57388867 None:intergenic 40.0%
TGATGCTGATATCTCATCTG+TGG - chr3.1:57390824-57390843 MS.gene032015:CDS 40.0%
TTACCATTCCATGTGTGGAT+AGG + chr3.1:57389450-57389469 None:intergenic 40.0%
TTTCACCGTCTTGTCTTAGT+AGG + chr3.1:57388709-57388728 None:intergenic 40.0%
! AGGTTAAACACCTCTAGAGA+AGG - chr3.1:57390451-57390470 MS.gene032015:intron 40.0%
! ATGCATGAATACCGATTGGA+GGG - chr3.1:57389403-57389422 MS.gene032015:intron 40.0%
! ATTTGATGGTCCTTCTCTAG+AGG + chr3.1:57390464-57390483 None:intergenic 40.0%
! CACATCTGATAGTGTCATGT+TGG + chr3.1:57389035-57389054 None:intergenic 40.0%
! TCCAGCATTAGTAGCTCTAT+TGG + chr3.1:57389263-57389282 None:intergenic 40.0%
!! GAAATGGCTTGTTTCAAAGG+TGG - chr3.1:57390853-57390872 MS.gene032015:CDS 40.0%
!!! CAAGTTGGTCCCTTATGTTT+TGG - chr3.1:57389797-57389816 MS.gene032015:CDS 40.0%
!!! CAATTGGTCTTTTCACCACT+CGG + chr3.1:57389379-57389398 None:intergenic 40.0%
AAATGGTGACCACTAGGGTT+TGG - chr3.1:57388881-57388900 MS.gene032015:intron 45.0%
AGAGTGTGTTACCCTCCAAT+CGG + chr3.1:57389417-57389436 None:intergenic 45.0%
AGGGAGAGAAAATACCCAAC+TGG - chr3.1:57389229-57389248 MS.gene032015:intron 45.0%
ATCACTGTTGAGGATGCTGT+TGG - chr3.1:57390734-57390753 MS.gene032015:intron 45.0%
CAACCTATCCACACATGGAA+TGG - chr3.1:57389444-57389463 MS.gene032015:intron 45.0%
CGAGTGGTGAAAAGACCAAT+TGG - chr3.1:57389377-57389396 MS.gene032015:intron 45.0%
CTAAGATGGGAGAAGCAGAA+TGG - chr3.1:57389191-57389210 MS.gene032015:intron 45.0%
CTATTGGTCCTTTGACCAGT+TGG + chr3.1:57389247-57389266 None:intergenic 45.0%
GCTGGATATTGGAAAGCAAC+AGG - chr3.1:57389277-57389296 MS.gene032015:intron 45.0%
GGGATGGTTCAAAACATGGA+AGG - chr3.1:57390431-57390450 MS.gene032015:intron 45.0%
GGTCATGCATGAATACCGAT+TGG - chr3.1:57389399-57389418 MS.gene032015:intron 45.0%
TGAACCAAACCTCAATGGTC+AGG - chr3.1:57390679-57390698 MS.gene032015:intron 45.0%
TGACGAATTCCTGACCATTG+AGG + chr3.1:57390691-57390710 None:intergenic 45.0%
TGGCTTGAACCAAACCTCAA+TGG - chr3.1:57390674-57390693 MS.gene032015:intron 45.0%
! CATGCATGAATACCGATTGG+AGG - chr3.1:57389402-57389421 MS.gene032015:intron 45.0%
GAGCACAACCTATCCACACA+TGG - chr3.1:57389439-57389458 MS.gene032015:intron 50.0%
TACATAGGAAGAGCTCCGAG+TGG - chr3.1:57389361-57389380 MS.gene032015:intron 50.0%
TGTGAACCATGGGATTTGCC+AGG - chr3.1:57388270-57388289 MS.gene032015:intron 50.0%
TTCTCCTTGCCAAACCCTAG+TGG + chr3.1:57388893-57388912 None:intergenic 50.0%
TTGGCAAGGAGAAAAGCGAG+TGG - chr3.1:57388900-57388919 MS.gene032015:intron 50.0%
GTGACCACTAGGGTTTGGCA+AGG - chr3.1:57388886-57388905 MS.gene032015:intron 55.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 57388096 57390938 57388096 ID=MS.gene032015
chr3.1 mRNA 57388096 57390938 57388096 ID=MS.gene032015.t1;Parent=MS.gene032015
chr3.1 exon 57390743 57390938 57390743 ID=MS.gene032015.t1.exon1;Parent=MS.gene032015.t1
chr3.1 CDS 57390743 57390938 57390743 ID=cds.MS.gene032015.t1;Parent=MS.gene032015.t1
chr3.1 exon 57389569 57389849 57389569 ID=MS.gene032015.t1.exon2;Parent=MS.gene032015.t1
chr3.1 CDS 57389569 57389849 57389569 ID=cds.MS.gene032015.t1;Parent=MS.gene032015.t1
chr3.1 exon 57388582 57388655 57388582 ID=MS.gene032015.t1.exon3;Parent=MS.gene032015.t1
chr3.1 CDS 57388582 57388655 57388582 ID=cds.MS.gene032015.t1;Parent=MS.gene032015.t1
chr3.1 exon 57388096 57388162 57388096 ID=MS.gene032015.t1.exon4;Parent=MS.gene032015.t1
chr3.1 CDS 57388096 57388162 57388096 ID=cds.MS.gene032015.t1;Parent=MS.gene032015.t1
Gene Sequence

>MS.gene032015

ATGGGATCAAATGAGAATGTTTCCAATCAAAAAATGGAAAATGAAAAGGTCGAATTTCCGGGTTGTTTTCGATTCTATCCGACCGATGAAGAGCTTATAAATCATTACCTTGTCAAAAAAGTTGATGACAATAGCTTCTCTGCTATAGCTATTGCTGAAGTTGATATGAATAAGTGTGAACCATGGGATTTGCCAGGTAAATTTAATGTTTTTTTTATAAGTAAATACTAGTTGTTATTATATTATATTAGTATGTCTAACCAAAAAAAAAATAGTAATATGGATATGAAAAACTATGCGTTGAAGTATTTTTTTTTTTAAATAAACGATGTTGATAGAGTGCGTCGATAACACATACATTTAAAGTCATTATAAACCAAACAGATGAATTTGCGAAAAAAGGGGCAAAATACACAAGACTACCAATATGACTATATTCATGTGTCAAAAATATTGATGCCTACATATCTGTAACATTGATGACACCAAAGTCATTGATTAGATCTGGACTAGATCAAAGCTAATCTTTCAACCTGAGTCAAATAAACACTGCATTAAGATGAAAAATCATGAAAACACTACAACAACGAGAAATCATAACAAACAATGTCCTACTAAGACAAGACGGTGAAATCATAAAAACGTACCAAAGAAGACTTAATTTATGTGGAAATCACTTATTTAACTAAAAAAAAGAAAGAAAAACAATTTGGAATGGTGATTACGGGACAAAATTAACCCTAAAACATCCTTCATTGGTAGATCTGGATGAAAAAGAAGAAGAAAAATGGTGACCACTAGGGTTTGGCAAGGAGAAAAGCGAGTGGTTTAATTACGCCTTAGAAATATTGTCGTTATCATCTTACTTTGATGGTTATATATTTTCTCTTAATTACTATGTATCACCGATACATCATAATGTGTAAGGTATGCACACCAACATGACACTATCAGATGTGGTTAAATTTATTATTTTATTTTTTAAAGTTATTACGAGTGTGGATTTGTCAGTGTCATGTCTAATGTATGTACTATGTCTTTTGGTGTTTCATAACTTAATTATGCTTTCTTATTTTTTGGTTTATTCAGAGATGGCTAAGATGGGAGAAGCAGAATGGTATTTTTTCTGTGTGAGGGAGAGAAAATACCCAACTGGTCAAAGGACCAATAGAGCTACTAATGCTGGATATTGGAAAGCAACAGGCAAAGACAAAGATATTTTCAAGGTAAATGCATTAATTGGGATGAAGAAAACATTGGTTTTCTACATAGGAAGAGCTCCGAGTGGTGAAAAGACCAATTGGGTCATGCATGAATACCGATTGGAGGGTAACACACTCTCTGAGCACAACCTATCCACACATGGAATGGTAATATTGCTATAATTTTTTTTATTTGTTTTTGTCTATGATTTCTACTCTTACTACATGTGAAAATTTGTTAGTGTATGTTCACATTGACCATGTGTTTGATAGAATTACCTTATGTTACCGTAATTTTGACAAAAACTTTACTTTTGAATTTTAACAAAATTATTGTGTCATTATTGTCAAACTTATCGTCGATCCAAACATTCATTGACGATCTATTTGTAATAAATAAAGTAAACTATTGTATGTTTGATTACCATCATAAAAATAAGTTTTATAAAAAATCAATGGCTTAATTGCATGTTTGGTCCCTTATGTTTATTTTAGTTTTCAAGTTGGTCCCTTATGTTTTGAAAGTTTCAAGTTGGTCCCATACGTTTATTTTAGTTTTCAAGTTGGTCCCTTACGTTTTGAAAGTTTCAAGTTAGTCCCTTATGTTTATTTTAGTTTTCAAGTTGGTCCCTTATGTTTATTTTAGTTTTCAAGTTGGTCCCTTATGTTTATTTTAGTTTTCAAGTTGGTCCCTTATGTTTTGGACCGACTTGAAAACTAAAATAAACATAAGGGACCAACTTGAAAACTAAAATAAACATAAGGGACCAACTTGAAACTTTCAAAACGTAAGGGACCAACTTGAAAACTTTTAAAACGTAAGGGACCAACTTGAAACTTTCAAAACGTAAGGGACCAACTTGAAAATTAAAATAAACATAAGGGACCAAACATGCAATTAAGCCAAAATCAATTAAAAAACCTAACTTTTAGAGAAACTACTGGAAACAACTTTTTGTTTGAATTCTTTCAAATACTAGTATTCTAAAAAATATGTAGAAAATGAATAAAAAGAAGAAGATTGTTTTGTTAAAAATAATGTTTTTTCATCTAATATTAATGTGTTAACCTTTTTTTTTAGAGTGAATGGGTTCTCAGTAGAGTCTTTGAGAAGCATAATTGTGGAAAGAAAAGGGATGGTTCAAAACATGGAAGGTTAAACACCTCTAGAGAAGGACCATCAAATACTAATGAAAACCAAACCACTATATGTCTGATTTCTCTCATGTGTTCAATTCATTCTCCAATCCAAATCAAACAGAGAAACAAAAAACACAAAATGACAACATTGTTCATAATAATGAAACTAGTATCTTGAACATTTCATCCTCTTCAAAACAAATGGATGTGTATCCTTTAGCTGAAGTAATAATTGCTGGCTTGAACCAAACCTCAATGGTCAGGAATTCGTCAAACTTTTTCTTCTCTCAAGAACAATCACTGTTGAGGATGCTGTTGGAGAATGAGAATCTTGGAACAACCTCAATACAAAGCCTAAACCAATAGTTTTCTTTCGGGAGAGACACTGATGCTGATATCTCATCTGTGGTATATGGAAATGGCTTGTTTCAAAGGTGGTTTGAGAATCAAGAATTGTCATCAGCTTCTACTGGACATAATGATAGCTTGTGGAATTTCTGA
Protein sequence

>MS.gene032015.t1

MGSNENVSNQKMENEKVEFPGCFRFYPTDEELINHYLVKKVDDNSFSAIAIAEVDMNKCEPWDLPEMAKMGEAEWYFFCVRERKYPTGQRTNRATNAGYWKATGKDKDIFKVNALIGMKKTLVFYIGRAPSGEKTNWVMHEYRLEGNTLSEHNLSTHGMSEWVLSRVFEKHNCGKKRDGSKHGRWFENQELSSASTGHNDSLWNF