AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene032055

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032055.t1 MTR_2g082090 98.446 579 9 0 1 579 1 579 0.0 1184
MS.gene032055.t1 MTR_5g097480 63.824 387 137 1 195 578 157 543 0.0 523
MS.gene032055.t1 MTR_3g056110 58.602 372 154 0 207 578 170 541 2.04e-167 487
MS.gene032055.t1 MTR_5g094450 49.307 505 210 6 79 578 68 531 1.84e-164 479
MS.gene032055.t1 MTR_4g133660 48.596 463 199 2 117 578 118 542 2.27e-157 461
MS.gene032055.t1 MTR_1g029420 53.050 377 176 1 202 578 216 591 2.22e-145 432
MS.gene032055.t1 MTR_2g026250 53.439 378 169 2 205 578 221 595 7.96e-143 426
MS.gene032055.t1 MTR_3g089055 52.973 370 174 0 210 579 196 565 7.88e-142 422
MS.gene032055.t1 MTR_3g089055 52.973 370 174 0 210 579 201 570 8.92e-142 422
MS.gene032055.t1 MTR_7g027190 34.394 503 275 9 113 578 188 672 1.01e-77 259
MS.gene032055.t1 MTR_4g064150 33.245 376 246 3 208 578 357 732 2.48e-68 235
MS.gene032055.t1 MTR_4g064160 32.258 372 251 1 208 578 312 683 1.18e-66 229
MS.gene032055.t1 MTR_2g097410 33.245 376 244 4 208 578 367 740 1.80e-65 228
MS.gene032055.t1 MTR_7g057230 36.267 375 223 6 210 578 292 656 7.37e-65 224
MS.gene032055.t1 MTR_3g065980 32.594 451 250 11 148 578 123 539 2.68e-64 220
MS.gene032055.t1 MTR_4g064180 28.780 549 358 9 40 577 98 624 3.63e-64 222
MS.gene032055.t1 MTR_4g064120 29.401 551 352 11 40 577 98 624 4.06e-64 221
MS.gene032055.t1 MTR_8g442410 35.142 387 224 7 208 579 151 525 4.82e-62 214
MS.gene032055.t1 MTR_4g097080 32.368 380 238 6 210 578 131 502 2.09e-61 211
MS.gene032055.t1 MTR_7g062120 31.720 372 253 1 208 578 368 739 4.77e-61 215
MS.gene032055.t1 MTR_6g047750 36.364 385 215 10 210 579 293 662 1.00e-60 213
MS.gene032055.t1 MTR_4g104020 31.593 383 240 5 209 578 146 519 2.87e-60 209
MS.gene032055.t1 MTR_7g074650 35.422 367 216 7 216 578 442 791 7.91e-60 213
MS.gene032055.t1 MTR_4g064200 32.172 373 248 4 208 578 280 649 1.33e-58 207
MS.gene032055.t1 MTR_2g097350 32.361 377 242 7 208 578 270 639 4.75e-58 205
MS.gene032055.t1 MTR_2g097310 31.016 374 251 3 208 578 268 637 8.44e-58 204
MS.gene032055.t1 MTR_2g097390 31.830 377 244 4 208 578 271 640 9.42e-58 204
MS.gene032055.t1 MTR_2g097473 32.048 415 269 7 166 578 250 653 5.63e-57 202
MS.gene032055.t1 MTR_2g097467 31.948 385 258 3 195 578 272 653 1.16e-56 202
MS.gene032055.t1 MTR_2g097463 30.935 417 280 4 163 578 245 654 8.28e-55 197
MS.gene032055.t1 MTR_3g022830 30.529 416 233 6 213 578 26 435 1.18e-54 191
MS.gene032055.t1 MTR_4g076140 31.163 430 230 8 209 578 45 468 2.62e-54 191
MS.gene032055.t1 MTR_4g077760 37.607 351 194 11 238 578 219 554 1.43e-53 191
MS.gene032055.t1 MTR_5g015490 32.199 382 238 8 212 578 114 489 3.06e-52 186
MS.gene032055.t1 MTR_4g102790 31.959 388 233 11 208 578 288 661 2.79e-50 184
MS.gene032055.t1 MTR_4g076020 33.333 369 214 9 216 579 88 429 2.73e-49 177
MS.gene032055.t1 MTR_1g069725 32.283 381 225 12 208 578 105 462 7.26e-47 171
MS.gene032055.t1 MTR_2g097380 28.650 363 227 5 217 578 229 560 1.70e-43 164
MS.gene032055.t1 MTR_1g096030 29.399 466 253 19 162 579 22 459 2.10e-42 159
MS.gene032055.t1 MTR_2g099110 29.381 388 244 8 211 578 73 450 7.96e-42 157
MS.gene032055.t1 MTR_5g058860 30.928 388 243 10 209 578 116 496 1.21e-40 154
MS.gene032055.t1 MTR_3g072710 31.566 396 232 13 209 578 117 499 1.01e-39 152
MS.gene032055.t1 MTR_2g089100 25.124 402 261 7 209 578 49 442 8.84e-37 142
MS.gene032055.t1 MTR_5g015950 25.527 427 248 11 209 578 32 445 2.70e-33 132
MS.gene032055.t1 MTR_3g053270 25.527 427 248 11 209 578 32 445 2.70e-33 132
MS.gene032055.t1 MTR_2g034250 25.831 391 256 10 209 578 207 584 7.25e-32 130
MS.gene032055.t1 MTR_5g009080 34.762 210 130 2 209 417 53 256 2.39e-31 127
MS.gene032055.t1 MTR_5g009080 41.611 149 86 1 431 578 329 477 2.93e-28 118
MS.gene032055.t1 MTR_4g095500 24.197 467 299 9 166 578 2 467 1.31e-30 125
MS.gene032055.t1 MTR_2g034260 25.781 384 264 9 209 578 207 583 6.67e-29 121
MS.gene032055.t1 MTR_2g034280 25.131 382 267 9 209 578 200 574 1.60e-27 117
MS.gene032055.t1 MTR_7g109580 24.545 440 289 13 151 578 145 553 6.21e-27 115
MS.gene032055.t1 MTR_8g093070 27.543 403 246 17 190 578 125 495 1.28e-26 114
MS.gene032055.t1 MTR_0092s0100 26.042 384 268 8 197 578 358 727 1.92e-26 114
MS.gene032055.t1 MTR_0092s0100 26.042 384 268 8 197 578 361 730 1.95e-26 114
MS.gene032055.t1 MTR_4g026485 25.000 352 220 10 243 578 300 623 3.33e-25 110
MS.gene032055.t1 MTR_1g086970 25.424 354 231 12 243 578 139 477 6.39e-24 105
MS.gene032055.t1 MTR_3g022580 38.532 109 67 0 470 578 74 182 2.80e-16 77.8
MS.gene032055.t1 MTR_3g022005 41.304 92 54 0 487 578 33 124 2.07e-13 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032055.t1 AT1G50600 62.797 379 141 0 200 578 147 525 1.01e-174 505
MS.gene032055.t1 AT1G50600 62.797 379 141 0 200 578 218 596 2.58e-174 507
MS.gene032055.t1 AT1G50600 62.797 379 141 0 200 578 222 600 3.69e-174 506
MS.gene032055.t1 AT5G48150 61.942 381 144 1 199 578 109 489 2.04e-169 490
MS.gene032055.t1 AT5G48150 61.942 381 144 1 199 578 109 489 2.04e-169 490
MS.gene032055.t1 AT5G48150 61.942 381 144 1 199 578 109 489 2.04e-169 490
MS.gene032055.t1 AT5G48150 61.942 381 144 1 199 578 109 489 2.04e-169 490
MS.gene032055.t1 AT2G04890 60.053 378 144 1 201 578 42 412 1.39e-162 470
MS.gene032055.t1 AT4G17230 54.011 374 172 0 205 578 151 524 1.39e-143 426
MS.gene032055.t1 AT4G17230 54.011 374 172 0 205 578 151 524 1.39e-143 426
MS.gene032055.t1 AT1G21450 45.824 467 228 7 114 579 151 593 4.22e-136 409
MS.gene032055.t1 AT1G07530 33.333 375 248 2 206 578 390 764 1.86e-68 236
MS.gene032055.t1 AT3G03450 35.294 374 229 7 209 578 180 544 2.07e-66 226
MS.gene032055.t1 AT5G52510 35.584 385 223 6 210 579 266 640 2.80e-65 225
MS.gene032055.t1 AT2G29060 33.600 375 245 3 208 578 280 654 2.83e-64 223
MS.gene032055.t1 AT2G29060 33.600 375 245 3 208 578 317 691 6.18e-64 223
MS.gene032055.t1 AT1G66350 34.667 375 219 9 209 578 152 505 6.28e-64 218
MS.gene032055.t1 AT5G17490 33.957 374 228 8 209 578 157 515 6.00e-63 216
MS.gene032055.t1 AT3G46600 34.140 372 241 4 209 578 1 370 4.46e-62 209
MS.gene032055.t1 AT1G14920 35.809 377 218 10 209 578 169 528 5.10e-62 214
MS.gene032055.t1 AT3G46600 34.316 373 241 4 208 578 208 578 8.28e-62 214
MS.gene032055.t1 AT3G46600 34.316 373 241 4 208 578 176 546 9.62e-62 213
MS.gene032055.t1 AT5G59450 33.333 378 242 6 208 578 223 597 1.11e-60 212
MS.gene032055.t1 AT3G54220 34.383 413 250 9 172 578 252 649 5.57e-60 211
MS.gene032055.t1 AT2G01570 35.092 379 218 11 209 578 221 580 2.47e-59 207
MS.gene032055.t1 AT1G50420 31.090 431 230 5 209 578 54 478 1.48e-58 203
MS.gene032055.t1 AT2G37650 31.452 372 252 2 208 578 331 700 2.97e-56 201
MS.gene032055.t1 AT2G37650 31.452 372 252 2 208 578 343 712 3.72e-56 201
MS.gene032055.t1 AT1G07520 31.053 380 252 6 208 578 150 528 3.70e-55 195
MS.gene032055.t1 AT1G07520 31.053 380 252 6 208 578 150 528 3.70e-55 195
MS.gene032055.t1 AT1G07520 30.607 379 255 4 208 578 315 693 1.18e-54 197
MS.gene032055.t1 AT1G07520 30.607 379 255 4 208 578 314 692 1.19e-54 197
MS.gene032055.t1 AT5G66770 34.908 381 225 10 209 579 217 584 4.08e-54 193
MS.gene032055.t1 AT2G29065 31.234 381 251 6 208 578 248 627 1.15e-52 190
MS.gene032055.t1 AT3G50650 34.726 383 225 10 208 578 172 541 2.69e-52 187
MS.gene032055.t1 AT5G41920 31.738 397 245 8 191 578 20 399 4.66e-48 173
MS.gene032055.t1 AT1G55580 33.981 309 180 6 285 578 145 444 6.97e-48 173
MS.gene032055.t1 AT4G37650 29.847 392 241 10 212 578 146 528 1.14e-46 172
MS.gene032055.t1 AT1G63100 31.877 389 239 8 208 578 273 653 1.40e-46 174
MS.gene032055.t1 AT1G63100 31.877 389 239 8 208 578 248 628 1.43e-46 173
MS.gene032055.t1 AT4G08250 28.906 384 248 12 209 578 104 476 7.07e-34 135
MS.gene032055.t1 AT3G49950 24.031 387 271 9 209 578 27 407 2.62e-30 123
MS.gene032055.t1 AT2G45160 26.171 363 218 12 237 578 305 638 7.03e-24 106
MS.gene032055.t1 AT3G60630 27.723 303 188 8 291 578 335 621 5.16e-23 103
MS.gene032055.t1 AT3G13840 24.945 457 303 15 135 578 80 509 9.87e-21 96.3
MS.gene032055.t1 AT5G67411 34.821 112 71 2 405 516 89 198 2.03e-11 63.9

Find 0 sgRNAs with CRISPR-Local

Find 165 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGTAACCAAATTTTAAGTA+GGG - 14509:22249-22268 MS.gene032055:intergenic 20.0%
! AGAAACTTTAGATTACTACT+TGG + 14509:22758-22777 MS.gene032055:CDS 25.0%
! ATTTGTCCCTACTTAAAATT+TGG + 14509:22240-22259 MS.gene032055:CDS 25.0%
! CTACTTAAAATTTGGTTACA+TGG + 14509:22248-22267 MS.gene032055:CDS 25.0%
!!! CATGTAACCAAATTTTAAGT+AGG - 14509:22250-22269 MS.gene032055:intergenic 25.0%
ACCACATCTAATTCTTCATT+GGG + 14509:21775-21794 MS.gene032055:CDS 30.0%
AGAATGATCTTTGCGTATAA+TGG - 14509:21621-21640 MS.gene032055:intergenic 30.0%
AGTATCAGAATCAAAATGAG+AGG - 14509:21506-21525 MS.gene032055:intergenic 30.0%
ATACACTAGTTGAGAAAGAT+GGG + 14509:23027-23046 MS.gene032055:CDS 30.0%
GAATCAAAATGAGAGGAAAA+CGG - 14509:21499-21518 MS.gene032055:intergenic 30.0%
TACCACATCTAATTCTTCAT+TGG + 14509:21774-21793 MS.gene032055:CDS 30.0%
TATACACTAGTTGAGAAAGA+TGG + 14509:23026-23045 MS.gene032055:CDS 30.0%
TCAAGTGATGAGTTATAAGA+GGG - 14509:21592-21611 MS.gene032055:intergenic 30.0%
TGTTGATGTGAATAATCCAA+GGG + 14509:22635-22654 MS.gene032055:CDS 30.0%
TTCAAGTGATGAGTTATAAG+AGG - 14509:21593-21612 MS.gene032055:intergenic 30.0%
TTCTAGCCATTTCTATCAAT+CGG - 14509:22056-22075 MS.gene032055:intergenic 30.0%
TTTGAATATATTGTGACCCT+TGG - 14509:21858-21877 MS.gene032055:intergenic 30.0%
! TTTTGACCGATTGATAGAAA+TGG + 14509:22047-22066 MS.gene032055:CDS 30.0%
AAATGCTGTGTCTATCAATG+GGG + 14509:22074-22093 MS.gene032055:CDS 35.0%
AAGAGGATTCATCTCTACAA+GGG + 14509:21953-21972 MS.gene032055:CDS 35.0%
AAGGATCCAAACAAACCATT+TGG - 14509:21445-21464 MS.gene032055:intergenic 35.0%
ACCCAATGAAGAATTAGATG+TGG - 14509:21779-21798 MS.gene032055:intergenic 35.0%
AGAAATGCTGTGTCTATCAA+TGG + 14509:22072-22091 MS.gene032055:CDS 35.0%
AGTTACAGTATGAGTAATGC+AGG + 14509:21388-21407 MS.gene032055:CDS 35.0%
ATAGACTTTCAGATTGCTCA+AGG + 14509:22324-22343 MS.gene032055:CDS 35.0%
ATTCACATCAACACTCTCAT+CGG - 14509:22628-22647 MS.gene032055:intergenic 35.0%
ATTTGATATCTGCTTCAGCT+TGG + 14509:23078-23097 MS.gene032055:CDS 35.0%
CAAGTGATGAGTTATAAGAG+GGG - 14509:21591-21610 MS.gene032055:intergenic 35.0%
GAAATGCTGTGTCTATCAAT+GGG + 14509:22073-22092 MS.gene032055:CDS 35.0%
GATGGAAAAGTTGACATGTA+AGG - 14509:21418-21437 MS.gene032055:intergenic 35.0%
GCCTTGATGTCTAAGAAATT+CGG + 14509:22483-22502 MS.gene032055:CDS 35.0%
GTTACAGTATGAGTAATGCA+GGG + 14509:21389-21408 MS.gene032055:CDS 35.0%
GTTTGATTCTTGTTCCACAA+GGG - 14509:22706-22725 MS.gene032055:intergenic 35.0%
TACACTAGTTGAGAAAGATG+GGG + 14509:23028-23047 MS.gene032055:CDS 35.0%
TCTATGAACCTGTTGAAGAA+AGG - 14509:22741-22760 MS.gene032055:intergenic 35.0%
TGATCTTTGCGTATAATGGT+TGG - 14509:21617-21636 MS.gene032055:intergenic 35.0%
TGTGGTAACTTCGTTATCAT+CGG - 14509:21761-21780 MS.gene032055:intergenic 35.0%
TGTTTGATTCTTGTTCCACA+AGG - 14509:22707-22726 MS.gene032055:intergenic 35.0%
TTGCTCCATGATCTATATCT+CGG - 14509:21829-21848 MS.gene032055:intergenic 35.0%
TTGTTTGGATCCTTGAAAGT+TGG + 14509:21451-21470 MS.gene032055:CDS 35.0%
! GTGTTGATGTGAATAATCCA+AGG + 14509:22634-22653 MS.gene032055:CDS 35.0%
! TTTCATGGGATTCCTGTTTT+TGG + 14509:22519-22538 MS.gene032055:CDS 35.0%
AACAAACCATTTGGCAGTGA+TGG - 14509:21436-21455 MS.gene032055:intergenic 40.0%
AACTCAGGAGAAATTCTCTC+TGG + 14509:21559-21578 MS.gene032055:CDS 40.0%
AAGCAGTGCATGTAGAGAAA+CGG + 14509:21920-21939 MS.gene032055:CDS 40.0%
AATCTCAAAAGTCCATCCCT+TGG - 14509:22654-22673 MS.gene032055:intergenic 40.0%
ACACAACACCTTTCTTCAAC+AGG + 14509:22730-22749 MS.gene032055:CDS 40.0%
AGAAGTAGTTGGAGAGAGAT+TGG + 14509:22461-22480 MS.gene032055:CDS 40.0%
AGATTGCTCAAGGAACTCAA+TGG + 14509:22334-22353 MS.gene032055:CDS 40.0%
ATCTCTACAAGGGTTTCCAT+CGG + 14509:21963-21982 MS.gene032055:CDS 40.0%
ATGAGAGGAAAACGGTGAAT+CGG - 14509:21491-21510 MS.gene032055:intergenic 40.0%
CTAGGTGCTTATATGGTAGA+AGG + 14509:22111-22130 MS.gene032055:CDS 40.0%
GAAGAGGATTCATCTCTACA+AGG + 14509:21952-21971 MS.gene032055:CDS 40.0%
GAAGTCTCTTTCTCCTAAAG+TGG + 14509:22677-22696 MS.gene032055:CDS 40.0%
GACATGCTTGATATCAGACA+CGG + 14509:22558-22577 MS.gene032055:CDS 40.0%
GATGTGAATAATCCAAGGGA+TGG + 14509:22639-22658 MS.gene032055:CDS 40.0%
GCCGAATTTCTTAGACATCA+AGG - 14509:22487-22506 MS.gene032055:intergenic 40.0%
GTGGTAACTTCGTTATCATC+GGG - 14509:21760-21779 MS.gene032055:intergenic 40.0%
GTTTCCAAAGCCAACTTTCA+AGG - 14509:21464-21483 MS.gene032055:intergenic 40.0%
TAATGTGGAGCAGCATTGTT+TGG + 14509:22833-22852 MS.gene032055:CDS 40.0%
TACTTGGTAAGTGGAAGTCT+AGG + 14509:22916-22935 MS.gene032055:CDS 40.0%
TAGCAAGGAGAGGATTAATG+TGG + 14509:22818-22837 MS.gene032055:CDS 40.0%
TCTCAAGAAATAGCAAGGAG+AGG + 14509:22808-22827 MS.gene032055:CDS 40.0%
TGCTCCATGATCTATATCTC+GGG - 14509:21828-21847 MS.gene032055:intergenic 40.0%
TGGTAACTTCGTTATCATCG+GGG - 14509:21759-21778 MS.gene032055:intergenic 40.0%
! ACTTTTCCATCACTGCCAAA+TGG + 14509:21427-21446 MS.gene032055:CDS 40.0%
!! AGCAGTTTCTAGTTCCAACA+AGG - 14509:21728-21747 MS.gene032055:intergenic 40.0%
!! CTCCTTGCTATTTCTTGAGA+GGG - 14509:22808-22827 MS.gene032055:intergenic 40.0%
!! TCACTGCCAAATGGTTTGTT+TGG + 14509:21436-21455 MS.gene032055:CDS 40.0%
!! TCTCCTTGCTATTTCTTGAG+AGG - 14509:22809-22828 MS.gene032055:intergenic 40.0%
!!! AAGGGATGGACTTTTGAGAT+TGG + 14509:22653-22672 MS.gene032055:CDS 40.0%
!!! TGTCGGATTTTCTGGTTACT+TGG - 14509:21703-21722 MS.gene032055:intergenic 40.0%
!!! TTCTGTGTTGTTTTCAGCCA+TGG - 14509:22025-22044 MS.gene032055:intergenic 40.0%
AAAGATGGGGCAATGCTCTT+AGG + 14509:23041-23060 MS.gene032055:CDS 45.0%
AAGATGGGGCAATGCTCTTA+GGG + 14509:23042-23061 MS.gene032055:CDS 45.0%
AATTGCTTCAAATCGCCCGA+TGG - 14509:21982-22001 MS.gene032055:intergenic 45.0%
AGCATCAAGGAAACAGCATC+CGG + 14509:21802-21821 MS.gene032055:CDS 45.0%
ATCCTCATTCCTGCATGCTT+CGG - 14509:22292-22311 MS.gene032055:intergenic 45.0%
ATTTGATTGCCTGCTACTGC+TGG - 14509:21899-21918 MS.gene032055:intergenic 45.0%
CACCCTCTCAAGAAATAGCA+AGG + 14509:22803-22822 MS.gene032055:CDS 45.0%
GAATCCCATGAAACTCAACC+GGG - 14509:22512-22531 MS.gene032055:intergenic 45.0%
GACACGAACTACTTGGTAAG+TGG + 14509:22907-22926 MS.gene032055:CDS 45.0%
GGAACTAGAAACTGCTCTGA+TGG + 14509:21732-21751 MS.gene032055:CDS 45.0%
GGAATCCCATGAAACTCAAC+CGG - 14509:22513-22532 MS.gene032055:intergenic 45.0%
GGTAACTTCGTTATCATCGG+GGG - 14509:21758-21777 MS.gene032055:intergenic 45.0%
GTCAATGTCATTGCATGCGA+AGG + 14509:22867-22886 MS.gene032055:CDS 45.0%
GTCTAAGAAATTCGGCATCC+CGG + 14509:22491-22510 MS.gene032055:CDS 45.0%
GTGAGTAATTCTTCGCCTTC+AGG - 14509:22198-22217 MS.gene032055:intergenic 45.0%
TATCAGACACGGAGAAGCTT+TGG + 14509:22569-22588 MS.gene032055:CDS 45.0%
TCTAAATATGCCCGTGGCAA+GGG + 14509:22435-22454 MS.gene032055:CDS 45.0%
TCTCTACAAGGGTTTCCATC+GGG + 14509:21964-21983 MS.gene032055:CDS 45.0%
TGAGAGGAAAACGGTGAATC+GGG - 14509:21490-21509 MS.gene032055:intergenic 45.0%
TGCATGCGAAGGTAAGGAAA+GGG + 14509:22878-22897 MS.gene032055:CDS 45.0%
TGTCATTGCATGCGAAGGTA+AGG + 14509:22872-22891 MS.gene032055:CDS 45.0%
TTCAGGCTCTCTGCACTTAA+GGG - 14509:22181-22200 MS.gene032055:intergenic 45.0%
TTGCATGCGAAGGTAAGGAA+AGG + 14509:22877-22896 MS.gene032055:CDS 45.0%
TTTGGTTACATGGCTGCCAA+TGG + 14509:22258-22277 MS.gene032055:CDS 45.0%
! AAGTCTAGGTTGACAATGGC+TGG + 14509:22930-22949 MS.gene032055:CDS 45.0%
! GCTCTGAATAGCATCTCAGA+AGG - 14509:23004-23023 MS.gene032055:intergenic 45.0%
! GGATCCTTGAAAGTTGGCTT+TGG + 14509:21457-21476 MS.gene032055:CDS 45.0%
! GTGGAAGTCTAGGTTGACAA+TGG + 14509:22926-22945 MS.gene032055:CDS 45.0%
!! AGAAGGTCTTGTTGCAAGGA+CGG + 14509:22128-22147 MS.gene032055:CDS 45.0%
!! GTTGTTTTCAGCCATGGCTT+TGG - 14509:22019-22038 MS.gene032055:intergenic 45.0%
!! TGGTAGAAGGTCTTGTTGCA+AGG + 14509:22124-22143 MS.gene032055:CDS 45.0%
!! TTCATTGGGTGAGAGCATCA+AGG + 14509:21789-21808 MS.gene032055:CDS 45.0%
AGCATGTCTCTTGTCACGTC+TGG - 14509:22546-22565 MS.gene032055:intergenic 50.0%
ATTCCTGCATGCTTCGGCAA+TGG - 14509:22286-22305 MS.gene032055:intergenic 50.0%
CAGTGCATGTAGAGAAACGG+CGG + 14509:21923-21942 MS.gene032055:CDS 50.0%
CATGGAGCAATGAGCACCAA+GGG + 14509:21839-21858 MS.gene032055:CDS 50.0%
CCACGGGCATATTTAGAGAC+TGG - 14509:22432-22451 MS.gene032055:intergenic 50.0%
CCAGAGGCTAGGTGCTTATA+TGG + 14509:22104-22123 MS.gene032055:CDS 50.0%
CCAGTCTCTAAATATGCCCG+TGG + 14509:22429-22448 MS.gene032055:CDS 50.0%
CCATATAAGCACCTAGCCTC+TGG - 14509:22107-22126 MS.gene032055:intergenic 50.0%
CCATGATCTATATCTCGGGC+CGG - 14509:21824-21843 MS.gene032055:intergenic 50.0%
CTACTGCTGGTAACATGCGA+CGG - 14509:21886-21905 MS.gene032055:intergenic 50.0%
CTACTTCTAGTCCCTTGCCA+CGG - 14509:22449-22468 MS.gene032055:intergenic 50.0%
CTAGTTCCAACAAGGCGTGT+CGG - 14509:21720-21739 MS.gene032055:intergenic 50.0%
CTCTAAATATGCCCGTGGCA+AGG + 14509:22434-22453 MS.gene032055:CDS 50.0%
CTTAAGTGCAGAGAGCCTGA+AGG + 14509:22180-22199 MS.gene032055:CDS 50.0%
CTTCAGGCTCTCTGCACTTA+AGG - 14509:22182-22201 MS.gene032055:intergenic 50.0%
GAAAATCCGACACGCCTTGT+TGG + 14509:21711-21730 MS.gene032055:CDS 50.0%
GATTGCATGTGCCAAAGCCA+TGG + 14509:22005-22024 MS.gene032055:CDS 50.0%
GCATCCCGGTTGAGTTTCAT+GGG + 14509:22505-22524 MS.gene032055:CDS 50.0%
GGCAAGGGACTAGAAGTAGT+TGG + 14509:22450-22469 MS.gene032055:CDS 50.0%
GTCACGTCTGGACCAAAAAC+AGG - 14509:22534-22553 MS.gene032055:intergenic 50.0%
TAAGCACCTAGCCTCTGGAT+TGG - 14509:22102-22121 MS.gene032055:intergenic 50.0%
TACTTCTAGTCCCTTGCCAC+GGG - 14509:22448-22467 MS.gene032055:intergenic 50.0%
TCAATGGGGAACCAATCCAG+AGG + 14509:22088-22107 MS.gene032055:CDS 50.0%
TCATGGAGCAATGAGCACCA+AGG + 14509:21838-21857 MS.gene032055:CDS 50.0%
TCCACAAGGGTGACCACTTT+AGG - 14509:22693-22712 MS.gene032055:intergenic 50.0%
TCCTAAAGTGGTCACCCTTG+TGG + 14509:22689-22708 MS.gene032055:CDS 50.0%
TCTTGAGAGGGTGACATCGA+TGG - 14509:22796-22815 MS.gene032055:intergenic 50.0%
TGGAGCAGCATTGTTTGGCT+CGG + 14509:22838-22857 MS.gene032055:CDS 50.0%
TGTAGAGAAACGGCGGAAGT+TGG + 14509:21930-21949 MS.gene032055:CDS 50.0%
! ACAAGGCGTGTCGGATTTTC+TGG - 14509:21711-21730 MS.gene032055:intergenic 50.0%
! CTGTGTGATGGAGTTGCAGT+GGG - 14509:22605-22624 MS.gene032055:intergenic 50.0%
AGCCACGAGCAACACAACTC+AGG + 14509:21544-21563 MS.gene032055:CDS 55.0%
ATGGGGCAATGCTCTTAGGG+TGG + 14509:23045-23064 MS.gene032055:CDS 55.0%
ATTCCTGTGATCCGCACGTG+GGG - 14509:22402-22421 MS.gene032055:intergenic 55.0%
CCGGCCCGAGATATAGATCA+TGG + 14509:21821-21840 MS.gene032055:CDS 55.0%
CGCATGTTACCAGCAGTAGC+AGG + 14509:21887-21906 MS.gene032055:CDS 55.0%
GAAACGGCGGAAGTTGGAAG+AGG + 14509:21936-21955 MS.gene032055:CDS 55.0%
GATTCCTGTGATCCGCACGT+GGG - 14509:22403-22422 MS.gene032055:intergenic 55.0%
GGCATCCCGGTTGAGTTTCA+TGG + 14509:22504-22523 MS.gene032055:CDS 55.0%
GTCGAGCGACACGAACTACT+TGG + 14509:22900-22919 MS.gene032055:CDS 55.0%
TGCCGAAGCATGCAGGAATG+AGG + 14509:22287-22306 MS.gene032055:CDS 55.0%
TGCTTCGGCAATGGCTCCAT+TGG - 14509:22277-22296 MS.gene032055:intergenic 55.0%
! CACTCTCATCGGCTGTGTGA+TGG - 14509:22617-22636 MS.gene032055:intergenic 55.0%
! CAGACACGGAGAAGCTTTGG+CGG + 14509:22572-22591 MS.gene032055:CDS 55.0%
! CTCCTGAGTTGTGTTGCTCG+TGG - 14509:21549-21568 MS.gene032055:intergenic 55.0%
! GCTGTGTGATGGAGTTGCAG+TGG - 14509:22606-22625 MS.gene032055:intergenic 55.0%
! GGAGCAGCATTGTTTGGCTC+GGG + 14509:22839-22858 MS.gene032055:CDS 55.0%
!! TTGCAAGGACGGAAGCGTCA+GGG + 14509:22139-22158 MS.gene032055:CDS 55.0%
CAAGCTCTTGCCGCAAGACC+TGG + 14509:22369-22388 MS.gene032055:CDS 60.0%
CGATTCCTGTGATCCGCACG+TGG - 14509:22404-22423 MS.gene032055:intergenic 60.0%
CTCTTGCCGCAAGACCTGGT+GGG + 14509:22373-22392 MS.gene032055:CDS 60.0%
GAGCCATTGCCGAAGCATGC+AGG + 14509:22280-22299 MS.gene032055:CDS 60.0%
GGGGAACCAATCCAGAGGCT+AGG + 14509:22093-22112 MS.gene032055:CDS 60.0%
TCTTGCCGCAAGACCTGGTG+GGG + 14509:22374-22393 MS.gene032055:CDS 60.0%
!! GTTGCAAGGACGGAAGCGTC+AGG + 14509:22138-22157 MS.gene032055:CDS 60.0%
GCTCTTGCCGCAAGACCTGG+TGG + 14509:22372-22391 MS.gene032055:CDS 65.0%
GCACCCCACGTGCGGATCAC+AGG + 14509:22396-22415 MS.gene032055:CDS 70.0%
GGGTGCCCCACCAGGTCTTG+CGG - 14509:22382-22401 MS.gene032055:intergenic 70.0%
! CTGGTGGGGCACCCCACGTG+CGG + 14509:22388-22407 MS.gene032055:CDS 75.0%
!! CGCACGTGGGGTGCCCCACC+AGG - 14509:22390-22409 MS.gene032055:intergenic 80.0%


Chromosome Type Strat End Strand Name
14509 gene 21367 23106 21367 ID=MS.gene032055
14509 mRNA 21367 23106 21367 ID=MS.gene032055.t1;Parent=MS.gene032055
14509 exon 21367 23106 21367 ID=MS.gene032055.t1.exon1;Parent=MS.gene032055.t1
14509 CDS 21367 23106 21367 ID=cds.MS.gene032055.t1;Parent=MS.gene032055.t1
Gene Sequence

>MS.gene032055

ATGGACTCGCAGCAACTTTACAGTTACAGTATGAGTAATGCAGGGTTACCTTACATGTCAACTTTTCCATCACTGCCAAATGGTTTGTTTGGATCCTTGAAAGTTGGCTTTGGAAACTCACCCGATTCACCGTTTTCCTCTCATTTTGATTCTGATACTCTTTCTGCATTTAGCGATAGCCACGAGCAACACAACTCAGGAGAAATTCTCTCTGGTATAAGCCCCTCTTATAACTCATCACTTGAAACCAACCATTATACGCAAAGATCATTCTCTTCGATCAACAGTCTCAAAGACAGTTTGCAACTATATTCTGCTAGAAATTCTTTTCTACCAAGTAACCAGAAAATCCGACACGCCTTGTTGGAACTAGAAACTGCTCTGATGGCCCCCGATGATAACGAAGTTACCACATCTAATTCTTCATTGGGTGAGAGCATCAAGGAAACAGCATCCGGCCCGAGATATAGATCATGGAGCAATGAGCACCAAGGGTCACAATATATTCAAAGTCAACCGTCGCATGTTACCAGCAGTAGCAGGCAATCAAATGAAGCAGTGCATGTAGAGAAACGGCGGAAGTTGGAAGAGGATTCATCTCTACAAGGGTTTCCATCGGGCGATTTGAAGCAATTACTGATTGCATGTGCCAAAGCCATGGCTGAAAACAACACAGAAGATTTTGACCGATTGATAGAAATGGCTAGAAATGCTGTGTCTATCAATGGGGAACCAATCCAGAGGCTAGGTGCTTATATGGTAGAAGGTCTTGTTGCAAGGACGGAAGCGTCAGGGAATAGTATCTATCACGCCCTTAAGTGCAGAGAGCCTGAAGGCGAAGAATTACTCACTTACATGCAACTGCTTTTTGAAATTTGTCCCTACTTAAAATTTGGTTACATGGCTGCCAATGGAGCCATTGCCGAAGCATGCAGGAATGAGGATCACATACACATCATAGACTTTCAGATTGCTCAAGGAACTCAATGGATGACACTTCTTCAAGCTCTTGCCGCAAGACCTGGTGGGGCACCCCACGTGCGGATCACAGGAATCGACGATCCAGTCTCTAAATATGCCCGTGGCAAGGGACTAGAAGTAGTTGGAGAGAGATTGGCCTTGATGTCTAAGAAATTCGGCATCCCGGTTGAGTTTCATGGGATTCCTGTTTTTGGTCCAGACGTGACAAGAGACATGCTTGATATCAGACACGGAGAAGCTTTGGCGGTGAATTTCCCACTGCAACTCCATCACACAGCCGATGAGAGTGTTGATGTGAATAATCCAAGGGATGGACTTTTGAGATTGGTGAAGTCTCTTTCTCCTAAAGTGGTCACCCTTGTGGAACAAGAATCAAACACAAACACAACACCTTTCTTCAACAGGTTCATAGAAACTTTAGATTACTACTTGGCAATCTTCGAGTCCATCGATGTCACCCTCTCAAGAAATAGCAAGGAGAGGATTAATGTGGAGCAGCATTGTTTGGCTCGGGATATCGTCAATGTCATTGCATGCGAAGGTAAGGAAAGGGTCGAGCGACACGAACTACTTGGTAAGTGGAAGTCTAGGTTGACAATGGCTGGATTTCGTCAATGTCATTTGAGTTCTTATGTGAATTCTGTTATAAGAAGCCTTCTGAGATGCTATTCAGAGCACTATACACTAGTTGAGAAAGATGGGGCAATGCTCTTAGGGTGGAAGAACAGAAATTTGATATCTGCTTCAGCTTGGCATTGA
Protein sequence

>MS.gene032055.t1

MDSQQLYSYSMSNAGLPYMSTFPSLPNGLFGSLKVGFGNSPDSPFSSHFDSDTLSAFSDSHEQHNSGEILSGISPSYNSSLETNHYTQRSFSSINSLKDSLQLYSARNSFLPSNQKIRHALLELETALMAPDDNEVTTSNSSLGESIKETASGPRYRSWSNEHQGSQYIQSQPSHVTSSSRQSNEAVHVEKRRKLEEDSSLQGFPSGDLKQLLIACAKAMAENNTEDFDRLIEMARNAVSINGEPIQRLGAYMVEGLVARTEASGNSIYHALKCREPEGEELLTYMQLLFEICPYLKFGYMAANGAIAEACRNEDHIHIIDFQIAQGTQWMTLLQALAARPGGAPHVRITGIDDPVSKYARGKGLEVVGERLALMSKKFGIPVEFHGIPVFGPDVTRDMLDIRHGEALAVNFPLQLHHTADESVDVNNPRDGLLRLVKSLSPKVVTLVEQESNTNTTPFFNRFIETLDYYLAIFESIDVTLSRNSKERINVEQHCLARDIVNVIACEGKERVERHELLGKWKSRLTMAGFRQCHLSSYVNSVIRSLLRCYSEHYTLVEKDGAMLLGWKNRNLISASAWH