Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene032109.t1 | KEH26852.1 | 75.3 | 81 | 20 | 0 | 179 | 259 | 64 | 144 | 1.70E-27 | 133.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene032109.t1 | A0A072UB72 | 75.3 | 81 | 20 | 0 | 179 | 259 | 64 | 144 | 1.2e-27 | 133.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene032109.t1 | TF | B3 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene032109.t1 | MTR_6g477950 | 75.309 | 81 | 20 | 0 | 179 | 259 | 64 | 144 | 4.95e-37 | 133 |
MS.gene032109.t1 | MTR_5g071410 | 30.350 | 257 | 174 | 1 | 9 | 260 | 13 | 269 | 5.06e-30 | 114 |
MS.gene032109.t1 | MTR_7g117585 | 42.718 | 103 | 59 | 0 | 158 | 260 | 44 | 146 | 1.51e-20 | 85.5 |
MS.gene032109.t1 | MTR_8g069780 | 33.113 | 151 | 94 | 2 | 116 | 259 | 5 | 155 | 3.78e-17 | 76.6 |
MS.gene032109.t1 | MTR_3g117130 | 45.783 | 83 | 45 | 0 | 180 | 262 | 199 | 281 | 1.76e-15 | 75.1 |
MS.gene032109.t1 | MTR_2g437520 | 45.783 | 83 | 42 | 1 | 180 | 259 | 121 | 203 | 7.70e-14 | 68.9 |
MS.gene032109.t1 | MTR_2g062330 | 33.333 | 105 | 67 | 2 | 155 | 259 | 37 | 138 | 8.28e-14 | 67.4 |
MS.gene032109.t1 | MTR_2g012700 | 35.802 | 81 | 52 | 0 | 179 | 259 | 39 | 119 | 2.80e-13 | 65.5 |
MS.gene032109.t1 | MTR_6g018740 | 44.615 | 65 | 36 | 0 | 173 | 237 | 45 | 109 | 1.37e-11 | 61.6 |
MS.gene032109.t1 | MTR_0131s0030 | 29.457 | 129 | 80 | 4 | 130 | 252 | 28 | 151 | 4.94e-11 | 60.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 58 sgRNAs with CRISPR-Local
Find 103 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTAACAAACAAGGATTTCTT+AGG | 0.186123 | 2.2:-14813718 | MS.gene032109:CDS |
GTGGATTGTCTTGGTTGATA+TGG | 0.259052 | 2.2:-14812867 | MS.gene032109:CDS |
GGGACCTAGATATTCAAATT+TGG | 0.262728 | 2.2:+14813583 | None:intergenic |
GCAATTAGTGTCTGCTACTC+TGG | 0.356766 | 2.2:-14813354 | MS.gene032109:CDS |
GCATCAATCGCGCGGAAGTT+TGG | 0.361192 | 2.2:-14813626 | MS.gene032109:CDS |
GAAGTGTGTCTTGATTTCTT+AGG | 0.406606 | 2.2:+14813744 | None:intergenic |
TAATATCGATGACTTCTTGA+TGG | 0.426992 | 2.2:+14813435 | None:intergenic |
TTCGTTCAGCCGTGTTGAGC+CGG | 0.427766 | 2.2:+14812822 | None:intergenic |
TCCACATTCTTTGCAACTTG+TGG | 0.429875 | 2.2:+14813521 | None:intergenic |
TATTCAAATTTGGCAATAGT+AGG | 0.446916 | 2.2:+14813593 | None:intergenic |
ATTGCCAAATTTGAATATCT+AGG | 0.447321 | 2.2:-14813587 | MS.gene032109:CDS |
TGACAGACTTTGCTTTGAGT+TGG | 0.449602 | 2.2:-14812732 | MS.gene032109:CDS |
TAACAAACAAGGATTTCTTA+GGG | 0.461413 | 2.2:-14813717 | MS.gene032109:CDS |
TGGATTGTCTTGGTTGATAT+GGG | 0.462523 | 2.2:-14812866 | MS.gene032109:CDS |
GACTTTGCTTTGAGTTGGAT+CGG | 0.463082 | 2.2:-14812727 | MS.gene032109:CDS |
TATTGACTGTTCCAAGGAAG+TGG | 0.465191 | 2.2:-14812886 | MS.gene032109:CDS |
TTCGCAGCAATGGGCGGCAA+AGG | 0.466913 | 2.2:-14814108 | MS.gene032109:intron |
GGAGGCATAATATTGCTTGA+TGG | 0.477612 | 2.2:-14812673 | None:intergenic |
TCGCAGCAATGGGCGGCAAA+GGG | 0.484684 | 2.2:-14814107 | MS.gene032109:intron |
ACCAAGACAATCCACTTCCT+TGG | 0.486425 | 2.2:+14812875 | None:intergenic |
CATTGTTTGTTACTGTGGTT+AGG | 0.486806 | 2.2:-14812694 | MS.gene032109:CDS |
AATATCGATGACTTCTTGAT+GGG | 0.497783 | 2.2:+14813436 | None:intergenic |
ATCTCTCTAGAAACACGGTT+GGG | 0.497985 | 2.2:+14812908 | None:intergenic |
TCCAAGGAAGTGGATTGTCT+TGG | 0.506695 | 2.2:-14812876 | MS.gene032109:CDS |
TACGACATTGTTTGTTACTG+TGG | 0.524239 | 2.2:-14812699 | MS.gene032109:CDS |
TCAGATGAAGAGCAAGATGA+AGG | 0.545162 | 2.2:-14813410 | MS.gene032109:CDS |
CAGATTGATCCATATCAAAA+CGG | 0.545197 | 2.2:+14813669 | None:intergenic |
CAATGTCAACAACCTCCTGC+GGG | 0.550886 | 2.2:+14813465 | None:intergenic |
AAGCGAGGTCAACCCGGAAG+AGG | 0.558187 | 2.2:-14814074 | MS.gene032109:intron |
TTCTTAGGAGAAAGTACCTG+TGG | 0.560267 | 2.2:-14813780 | MS.gene032109:intron |
ACTCTGGCTCAGTCTGTACA+TGG | 0.560923 | 2.2:-14813338 | MS.gene032109:CDS |
CAGGAAAATATATAACATCA+TGG | 0.561252 | 2.2:+14814413 | None:intergenic |
CACTAATTGCTCAAAACAGT+AGG | 0.563543 | 2.2:+14813367 | None:intergenic |
AGAGACCGTCGCCTAAAAGA+AGG | 0.564376 | 2.2:-14812755 | MS.gene032109:CDS |
CACTCAAAGAGTACAAGTGC+CGG | 0.570685 | 2.2:-14812841 | MS.gene032109:CDS |
TGTTTGTTACTGTGGTTAGG+AGG | 0.575982 | 2.2:-14812691 | MS.gene032109:CDS |
TATCTCTCTAGAAACACGGT+TGG | 0.578750 | 2.2:+14812907 | None:intergenic |
TCCACAAGTTGCAAAGAATG+TGG | 0.584254 | 2.2:-14813522 | MS.gene032109:CDS |
GTCTGTACATGGTCAACCAA+TGG | 0.590393 | 2.2:-14813327 | MS.gene032109:intron |
TCAATGTCAACAACCTCCTG+CGG | 0.599707 | 2.2:+14813464 | None:intergenic |
AGGTAGAATTGAAAATCCAC+AGG | 0.601572 | 2.2:+14813764 | None:intergenic |
ACAGTAACAAACAATGTCGT+AGG | 0.611776 | 2.2:+14812701 | None:intergenic |
ACTAATTGCTCAAAACAGTA+GGG | 0.614808 | 2.2:+14813368 | None:intergenic |
GAGAGATATTGACTGTTCCA+AGG | 0.614814 | 2.2:-14812892 | MS.gene032109:CDS |
TCTGGAATTTCAATGAAGAA+CGG | 0.620632 | 2.2:-14813650 | MS.gene032109:CDS |
TGAAAATCAACAAGTCCCGC+AGG | 0.625029 | 2.2:-14813480 | MS.gene032109:CDS |
ACACTTCAAGTTAACAAACA+AGG | 0.635666 | 2.2:-14813728 | MS.gene032109:CDS |
AGATGAAGGTGAGCAACAAG+AGG | 0.637779 | 2.2:-14813396 | MS.gene032109:CDS |
CTTAGGGATCACGATGACAG+AGG | 0.638563 | 2.2:-14813701 | MS.gene032109:CDS |
TTTCATAAGCGAGGTCAACC+CGG | 0.644372 | 2.2:-14814080 | MS.gene032109:CDS |
GTAACAAACAATGTCGTAGG+AGG | 0.644906 | 2.2:+14812704 | None:intergenic |
TTGTGGATTAGCATCAGCCA+AGG | 0.656841 | 2.2:+14813538 | None:intergenic |
GTACAAGTGCCGGCTCAACA+CGG | 0.672301 | 2.2:-14812831 | MS.gene032109:CDS |
TGGATTAGCATCAGCCAAGG+AGG | 0.673979 | 2.2:+14813541 | None:intergenic |
ATATCGATGACTTCTTGATG+GGG | 0.679737 | 2.2:+14813437 | None:intergenic |
AAATCAACAAGTCCCGCAGG+AGG | 0.691078 | 2.2:-14813477 | MS.gene032109:CDS |
TCAATATCTCTCTAGAAACA+CGG | 0.691358 | 2.2:+14812903 | None:intergenic |
AGAACGGTGCATCAATCGCG+CGG | 0.707547 | 2.2:-14813634 | MS.gene032109:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTACATTAATATATAGA+AGG | - | chr2.2:14812851-14812870 | MS.gene032109:CDS | 10.0% |
!! | AAAAAATTTGAATTAAGATC+AGG | - | chr2.2:14813894-14813913 | MS.gene032109:intron | 15.0% |
!! | AAACAATATCTTTATTATGT+TGG | - | chr2.2:14813201-14813220 | MS.gene032109:intron | 15.0% |
!!! | AATTCAAATTTTTTCCTAAA+AGG | + | chr2.2:14813888-14813907 | None:intergenic | 15.0% |
!!! | AATTTTTTTTAAGAACTTAC+AGG | + | chr2.2:14812696-14812715 | None:intergenic | 15.0% |
!!! | GGTTGAATTATAATTATTTT+GGG | - | chr2.2:14813222-14813241 | MS.gene032109:intron | 15.0% |
!!! | TGGTTGAATTATAATTATTT+TGG | - | chr2.2:14813221-14813240 | MS.gene032109:intron | 15.0% |
!! | AACATATGATGTATTCTATA+TGG | - | chr2.2:14813259-14813278 | MS.gene032109:intron | 20.0% |
!! | CTAAGAACAACAAATATAAA+GGG | + | chr2.2:14813294-14813313 | None:intergenic | 20.0% |
!! | TCATTTAATGAAATGACTAA+AGG | - | chr2.2:14812818-14812837 | MS.gene032109:CDS | 20.0% |
!! | TTTATTGTATAACTTACCAT+TGG | + | chr2.2:14813779-14813798 | None:intergenic | 20.0% |
!!! | GAATTTTAATTATAAGGAGA+AGG | + | chr2.2:14813805-14813824 | None:intergenic | 20.0% |
! | AACAAATGCGAAAAATCATT+AGG | - | chr2.2:14814287-14814306 | MS.gene032109:intron | 25.0% |
! | ATGATGTTCAGATAAATGTA+AGG | - | chr2.2:14813178-14813197 | MS.gene032109:intron | 25.0% |
! | ATTGCCAAATTTGAATATCT+AGG | - | chr2.2:14813500-14813519 | MS.gene032109:CDS | 25.0% |
! | CCTAAGAACAACAAATATAA+AGG | + | chr2.2:14813295-14813314 | None:intergenic | 25.0% |
! | GATGTACATATGATTCAAAT+TGG | - | chr2.2:14814108-14814127 | MS.gene032109:intron | 25.0% |
! | GTAACAAAAAACATGTTCAA+GGG | + | chr2.2:14813527-14813546 | None:intergenic | 25.0% |
! | TAACAAACAAGGATTTCTTA+GGG | - | chr2.2:14813370-14813389 | MS.gene032109:CDS | 25.0% |
! | TATTCAAATTTGGCAATAGT+AGG | + | chr2.2:14813497-14813516 | None:intergenic | 25.0% |
! | TTAAAAGATTAACCTTCCTA+GGG | + | chr2.2:14813967-14813986 | None:intergenic | 25.0% |
! | TTAACAAACAAGGATTTCTT+AGG | - | chr2.2:14813369-14813388 | MS.gene032109:CDS | 25.0% |
!! | AATATTTTACATACCTCTTC+CGG | + | chr2.2:14813029-14813048 | None:intergenic | 25.0% |
!! | CAAATATGCAAAATCCTTTT+AGG | - | chr2.2:14813871-14813890 | MS.gene032109:intron | 25.0% |
!!! | CCTTTATATTTGTTGTTCTT+AGG | - | chr2.2:14813292-14813311 | MS.gene032109:intron | 25.0% |
AAAAATCATTAGGAAGAGGA+TGG | - | chr2.2:14814297-14814316 | MS.gene032109:intron | 30.0% | |
AATATCGATGACTTCTTGAT+GGG | + | chr2.2:14813654-14813673 | None:intergenic | 30.0% | |
ACTAATTGCTCAAAACAGTA+GGG | + | chr2.2:14813722-14813741 | None:intergenic | 30.0% | |
CAGATTGATCCATATCAAAA+CGG | + | chr2.2:14813421-14813440 | None:intergenic | 30.0% | |
GGTAACAAAAAACATGTTCA+AGG | + | chr2.2:14813528-14813547 | None:intergenic | 30.0% | |
GTAGTTCAAGTGTTACAATT+TGG | - | chr2.2:14813055-14813074 | MS.gene032109:intron | 30.0% | |
GTTAAAAGATTAACCTTCCT+AGG | + | chr2.2:14813968-14813987 | None:intergenic | 30.0% | |
TAATATCGATGACTTCTTGA+TGG | + | chr2.2:14813655-14813674 | None:intergenic | 30.0% | |
TTGGTATGTGCAATTTACTA+AGG | - | chr2.2:14814127-14814146 | MS.gene032109:intron | 30.0% | |
! | ACACTTCAAGTTAACAAACA+AGG | - | chr2.2:14813359-14813378 | MS.gene032109:CDS | 30.0% |
! | ATATTTTACATACCTCTTCC+GGG | + | chr2.2:14813028-14813047 | None:intergenic | 30.0% |
! | TCAATATCTCTCTAGAAACA+CGG | + | chr2.2:14814187-14814206 | None:intergenic | 30.0% |
! | TCTGGAATTTCAATGAAGAA+CGG | - | chr2.2:14813437-14813456 | MS.gene032109:CDS | 30.0% |
!! | CATTGTTATCCGTTTTGATA+TGG | - | chr2.2:14813409-14813428 | MS.gene032109:CDS | 30.0% |
!!! | TAAGGTGTTTTTGTCACTTT+TGG | - | chr2.2:14814145-14814164 | MS.gene032109:intron | 30.0% |
ACAGTAACAAACAATGTCGT+AGG | + | chr2.2:14814389-14814408 | None:intergenic | 35.0% | |
ACCACAAGATGAGACATATT+CGG | - | chr2.2:14814052-14814071 | MS.gene032109:intron | 35.0% | |
AGGTAGAATTGAAAATCCAC+AGG | + | chr2.2:14813326-14813345 | None:intergenic | 35.0% | |
ATATCGATGACTTCTTGATG+GGG | + | chr2.2:14813653-14813672 | None:intergenic | 35.0% | |
CACTAATTGCTCAAAACAGT+AGG | + | chr2.2:14813723-14813742 | None:intergenic | 35.0% | |
GAAGTGTGTCTTGATTTCTT+AGG | + | chr2.2:14813346-14813365 | None:intergenic | 35.0% | |
GGGACCTAGATATTCAAATT+TGG | + | chr2.2:14813507-14813526 | None:intergenic | 35.0% | |
TGCGAAAAATCATTAGGAAG+AGG | - | chr2.2:14814293-14814312 | MS.gene032109:intron | 35.0% | |
! | AAAGTCTGTCACCTTCTTTT+AGG | + | chr2.2:14814346-14814365 | None:intergenic | 35.0% |
! | CATTGTTTGTTACTGTGGTT+AGG | - | chr2.2:14814393-14814412 | MS.gene032109:intron | 35.0% |
! | TACGACATTGTTTGTTACTG+TGG | - | chr2.2:14814388-14814407 | MS.gene032109:intron | 35.0% |
! | TGGATTGTCTTGGTTGATAT+GGG | - | chr2.2:14814221-14814240 | MS.gene032109:intron | 35.0% |
!! | CGTTTTGATATGGATCAATC+TGG | - | chr2.2:14813419-14813438 | MS.gene032109:CDS | 35.0% |
!!! | AAGGGATTTTTTCATAAGCG+AGG | - | chr2.2:14812998-14813017 | MS.gene032109:intron | 35.0% |
!!! | CATGTTTTTTGTTACCTCCT+TGG | - | chr2.2:14813532-14813551 | MS.gene032109:CDS | 35.0% |
!!! | TCATTGATTTTCGCAGCAAT+GGG | - | chr2.2:14812970-14812989 | MS.gene032109:intron | 35.0% |
!!! | TTCATTGATTTTCGCAGCAA+TGG | - | chr2.2:14812969-14812988 | MS.gene032109:intron | 35.0% |
ACCGAATATGTCTCATCTTG+TGG | + | chr2.2:14814056-14814075 | None:intergenic | 40.0% | |
ATTAACCTTCCTAGGGATCA+TGG | + | chr2.2:14813960-14813979 | None:intergenic | 40.0% | |
GTAACAAACAATGTCGTAGG+AGG | + | chr2.2:14814386-14814405 | None:intergenic | 40.0% | |
TATGTTGTTCCATGATCCCT+AGG | - | chr2.2:14813948-14813967 | MS.gene032109:intron | 40.0% | |
TCAGATGAAGAGCAAGATGA+AGG | - | chr2.2:14813677-14813696 | MS.gene032109:CDS | 40.0% | |
TCCACAAGTTGCAAAGAATG+TGG | - | chr2.2:14813565-14813584 | MS.gene032109:CDS | 40.0% | |
TCCACATTCTTTGCAACTTG+TGG | + | chr2.2:14813569-14813588 | None:intergenic | 40.0% | |
! | ATCTCTCTAGAAACACGGTT+GGG | + | chr2.2:14814182-14814201 | None:intergenic | 40.0% |
! | GAGAGATATTGACTGTTCCA+AGG | - | chr2.2:14814195-14814214 | MS.gene032109:intron | 40.0% |
! | GTGGATTGTCTTGGTTGATA+TGG | - | chr2.2:14814220-14814239 | MS.gene032109:intron | 40.0% |
! | TATCTCTCTAGAAACACGGT+TGG | + | chr2.2:14814183-14814202 | None:intergenic | 40.0% |
! | TATTGACTGTTCCAAGGAAG+TGG | - | chr2.2:14814201-14814220 | MS.gene032109:intron | 40.0% |
! | TGACAGACTTTGCTTTGAGT+TGG | - | chr2.2:14814355-14814374 | MS.gene032109:intron | 40.0% |
! | TGTTTGTTACTGTGGTTAGG+AGG | - | chr2.2:14814396-14814415 | MS.gene032109:intron | 40.0% |
!! | GACTTTGCTTTGAGTTGGAT+CGG | - | chr2.2:14814360-14814379 | MS.gene032109:intron | 40.0% |
!! | TTCTTAGGAGAAAGTACCTG+TGG | - | chr2.2:14813307-14813326 | MS.gene032109:intron | 40.0% |
ACCAAGACAATCCACTTCCT+TGG | + | chr2.2:14814215-14814234 | None:intergenic | 45.0% | |
AGATGAAGGTGAGCAACAAG+AGG | - | chr2.2:14813691-14813710 | MS.gene032109:CDS | 45.0% | |
GCAATTAGTGTCTGCTACTC+TGG | - | chr2.2:14813733-14813752 | MS.gene032109:CDS | 45.0% | |
GTCTGTACATGGTCAACCAA+TGG | - | chr2.2:14813760-14813779 | MS.gene032109:CDS | 45.0% | |
TCAATGTCAACAACCTCCTG+CGG | + | chr2.2:14813626-14813645 | None:intergenic | 45.0% | |
TGAAAATCAACAAGTCCCGC+AGG | - | chr2.2:14813607-14813626 | MS.gene032109:CDS | 45.0% | |
TTGTTCCATGATCCCTAGGA+AGG | - | chr2.2:14813952-14813971 | MS.gene032109:intron | 45.0% | |
TTTCATAAGCGAGGTCAACC+CGG | - | chr2.2:14813007-14813026 | MS.gene032109:intron | 45.0% | |
! | CACTCAAAGAGTACAAGTGC+CGG | - | chr2.2:14814246-14814265 | MS.gene032109:intron | 45.0% |
! | TGTCACCTTCTTTTAGGCGA+CGG | + | chr2.2:14814340-14814359 | None:intergenic | 45.0% |
! | TTGATTTTCGCAGCAATGGG+CGG | - | chr2.2:14812973-14812992 | MS.gene032109:intron | 45.0% |
!! | TCCAAGGAAGTGGATTGTCT+TGG | - | chr2.2:14814211-14814230 | MS.gene032109:intron | 45.0% |
!! | TTGTGGATTAGCATCAGCCA+AGG | + | chr2.2:14813552-14813571 | None:intergenic | 45.0% |
!!! | AAAAAAATTGTTATTATTTT+TGG | - | chr2.2:14812707-14812726 | MS.gene032109:CDS | 5.0% |
!!! | AAAATAGAATTTTAATTATA+AGG | + | chr2.2:14813811-14813830 | None:intergenic | 5.0% |
!!! | ATTTTATATATAAAATTAAG+TGG | - | chr2.2:14812767-14812786 | MS.gene032109:CDS | 5.0% |
!!! | TTTTATATATAAAATTAAGT+GGG | - | chr2.2:14812768-14812787 | MS.gene032109:CDS | 5.0% |
AAATCAACAAGTCCCGCAGG+AGG | - | chr2.2:14813610-14813629 | MS.gene032109:CDS | 50.0% | |
AGAGACCGTCGCCTAAAAGA+AGG | - | chr2.2:14814332-14814351 | MS.gene032109:intron | 50.0% | |
CAATGTCAACAACCTCCTGC+GGG | + | chr2.2:14813625-14813644 | None:intergenic | 50.0% | |
CTTAGGGATCACGATGACAG+AGG | - | chr2.2:14813386-14813405 | MS.gene032109:CDS | 50.0% | |
! | ACTCTGGCTCAGTCTGTACA+TGG | - | chr2.2:14813749-14813768 | MS.gene032109:CDS | 50.0% |
!! | TGGATTAGCATCAGCCAAGG+AGG | + | chr2.2:14813549-14813568 | None:intergenic | 50.0% |
AGAACGGTGCATCAATCGCG+CGG | - | chr2.2:14813453-14813472 | MS.gene032109:CDS | 55.0% | |
GCATCAATCGCGCGGAAGTT+TGG | - | chr2.2:14813461-14813480 | MS.gene032109:CDS | 55.0% | |
TTCGTTCAGCCGTGTTGAGC+CGG | + | chr2.2:14814268-14814287 | None:intergenic | 55.0% | |
!! | GTACAAGTGCCGGCTCAACA+CGG | - | chr2.2:14814256-14814275 | MS.gene032109:intron | 55.0% |
AAGCGAGGTCAACCCGGAAG+AGG | - | chr2.2:14813013-14813032 | MS.gene032109:intron | 60.0% | |
TCGCAGCAATGGGCGGCAAA+GGG | - | chr2.2:14812980-14812999 | MS.gene032109:intron | 60.0% | |
TTCGCAGCAATGGGCGGCAA+AGG | - | chr2.2:14812979-14812998 | MS.gene032109:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 14812676 | 14814433 | 14812676 | ID=MS.gene032109 |
chr2.2 | mRNA | 14812676 | 14814433 | 14812676 | ID=MS.gene032109.t1;Parent=MS.gene032109 |
chr2.2 | exon | 14814414 | 14814433 | 14814414 | ID=MS.gene032109.t1.exon1;Parent=MS.gene032109.t1 |
chr2.2 | CDS | 14814414 | 14814433 | 14814414 | ID=cds.MS.gene032109.t1;Parent=MS.gene032109.t1 |
chr2.2 | exon | 14814075 | 14814123 | 14814075 | ID=MS.gene032109.t1.exon2;Parent=MS.gene032109.t1 |
chr2.2 | CDS | 14814075 | 14814123 | 14814075 | ID=cds.MS.gene032109.t1;Parent=MS.gene032109.t1 |
chr2.2 | exon | 14813328 | 14813795 | 14813328 | ID=MS.gene032109.t1.exon3;Parent=MS.gene032109.t1 |
chr2.2 | CDS | 14813328 | 14813795 | 14813328 | ID=cds.MS.gene032109.t1;Parent=MS.gene032109.t1 |
chr2.2 | exon | 14812676 | 14812936 | 14812676 | ID=MS.gene032109.t1.exon4;Parent=MS.gene032109.t1 |
chr2.2 | CDS | 14812676 | 14812936 | 14812676 | ID=cds.MS.gene032109.t1;Parent=MS.gene032109.t1 |
Gene Sequence |
Protein sequence |