Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene032113.t1 | XP_024632639.1 | 95.5 | 694 | 31 | 0 | 1 | 694 | 1 | 694 | 0.00E+00 | 1349.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene032113.t1 | Q9SZL8 | 31.6 | 636 | 426 | 7 | 3 | 632 | 69 | 701 | 2.7e-97 | 357.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene032113.t1 | A0A2Z6MT37 | 66.5 | 693 | 127 | 1 | 1 | 693 | 1 | 588 | 9.6e-258 | 899.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene032113.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene032113.t1 | MTR_5g039760 | 44.221 | 199 | 84 | 4 | 6 | 202 | 9 | 182 | 4.59e-46 | 162 |
MS.gene032113.t1 | MTR_0558s0020 | 34.601 | 263 | 140 | 6 | 11 | 247 | 40 | 296 | 1.10e-38 | 145 |
MS.gene032113.t1 | MTR_6g051425 | 32.014 | 278 | 170 | 4 | 9 | 274 | 19 | 289 | 3.21e-38 | 145 |
MS.gene032113.t1 | MTR_0402s0040 | 40.887 | 203 | 108 | 3 | 4 | 204 | 23 | 215 | 3.59e-38 | 149 |
MS.gene032113.t1 | MTR_7g074790 | 45.029 | 171 | 74 | 3 | 6 | 175 | 9 | 160 | 1.32e-37 | 140 |
MS.gene032113.t1 | MTR_6g090505 | 35.417 | 240 | 129 | 5 | 35 | 254 | 5 | 238 | 9.12e-34 | 133 |
MS.gene032113.t1 | MTR_8g446020 | 38.202 | 178 | 108 | 1 | 72 | 247 | 79 | 256 | 5.53e-33 | 128 |
MS.gene032113.t1 | MTR_7g061980 | 47.826 | 115 | 58 | 2 | 3 | 116 | 6 | 119 | 1.93e-28 | 110 |
MS.gene032113.t1 | MTR_5g015480 | 47.541 | 122 | 62 | 1 | 7 | 126 | 56 | 177 | 3.13e-27 | 111 |
MS.gene032113.t1 | MTR_4g102720 | 35.928 | 167 | 73 | 2 | 6 | 172 | 6 | 138 | 1.42e-26 | 108 |
MS.gene032113.t1 | MTR_7g446520 | 30.085 | 236 | 150 | 2 | 2 | 237 | 83 | 303 | 7.38e-26 | 109 |
MS.gene032113.t1 | MTR_1g083640 | 29.832 | 238 | 135 | 6 | 11 | 222 | 55 | 286 | 2.87e-25 | 106 |
MS.gene032113.t1 | MTR_1g070355 | 28.163 | 245 | 165 | 6 | 11 | 248 | 78 | 318 | 3.97e-24 | 107 |
MS.gene032113.t1 | MTR_5g076070 | 27.273 | 231 | 159 | 5 | 10 | 235 | 56 | 282 | 3.06e-21 | 94.7 |
MS.gene032113.t1 | MTR_7g446510 | 30.636 | 173 | 120 | 0 | 83 | 255 | 157 | 329 | 3.97e-21 | 95.5 |
MS.gene032113.t1 | MTR_1g057920 | 44.086 | 93 | 50 | 1 | 4 | 94 | 31 | 123 | 9.37e-21 | 89.0 |
MS.gene032113.t1 | MTR_7g446480 | 30.636 | 173 | 120 | 0 | 83 | 255 | 142 | 314 | 3.90e-20 | 92.4 |
MS.gene032113.t1 | MTR_2g070590 | 42.991 | 107 | 59 | 1 | 4 | 108 | 14 | 120 | 6.73e-20 | 86.3 |
MS.gene032113.t1 | MTR_0337s0040 | 33.566 | 143 | 93 | 1 | 72 | 212 | 80 | 222 | 1.91e-19 | 88.2 |
MS.gene032113.t1 | MTR_6g017200 | 44.898 | 98 | 52 | 1 | 4 | 99 | 55 | 152 | 2.30e-19 | 85.9 |
MS.gene032113.t1 | MTR_7g113010 | 40.000 | 130 | 62 | 2 | 4 | 131 | 454 | 569 | 5.70e-19 | 91.7 |
MS.gene032113.t1 | MTR_2g099430 | 48.235 | 85 | 44 | 0 | 32 | 116 | 28 | 112 | 1.40e-17 | 79.3 |
MS.gene032113.t1 | MTR_4g035820 | 23.295 | 352 | 247 | 9 | 4 | 343 | 72 | 412 | 2.40e-17 | 86.7 |
MS.gene032113.t1 | MTR_1g086270 | 34.286 | 105 | 62 | 2 | 301 | 398 | 1 | 105 | 8.89e-16 | 73.9 |
MS.gene032113.t1 | MTR_6g022070 | 27.168 | 173 | 119 | 3 | 301 | 472 | 1 | 167 | 1.30e-15 | 79.3 |
MS.gene032113.t1 | MTR_4g067290 | 38.835 | 103 | 61 | 2 | 6 | 107 | 55 | 156 | 2.07e-14 | 73.9 |
MS.gene032113.t1 | MTR_4g067290 | 38.835 | 103 | 61 | 2 | 6 | 107 | 55 | 156 | 2.12e-14 | 73.6 |
MS.gene032113.t1 | MTR_2g014100 | 27.778 | 198 | 123 | 4 | 11 | 188 | 48 | 245 | 2.38e-14 | 73.9 |
MS.gene032113.t1 | MTR_4g067290 | 38.835 | 103 | 61 | 2 | 6 | 107 | 75 | 176 | 4.05e-14 | 73.2 |
MS.gene032113.t1 | MTR_4g067290 | 38.835 | 103 | 61 | 2 | 6 | 107 | 73 | 174 | 4.11e-14 | 73.2 |
MS.gene032113.t1 | MTR_4g067290 | 38.835 | 103 | 61 | 2 | 6 | 107 | 75 | 176 | 4.25e-14 | 73.2 |
MS.gene032113.t1 | MTR_4g067290 | 38.835 | 103 | 61 | 2 | 6 | 107 | 115 | 216 | 6.16e-14 | 73.6 |
MS.gene032113.t1 | MTR_6g022080 | 28.758 | 153 | 104 | 3 | 18 | 166 | 96 | 247 | 2.92e-13 | 70.9 |
MS.gene032113.t1 | MTR_1g013060 | 26.570 | 207 | 143 | 5 | 6 | 205 | 23 | 227 | 3.98e-13 | 69.7 |
MS.gene032113.t1 | MTR_2g098880 | 37.143 | 105 | 63 | 2 | 6 | 107 | 60 | 164 | 2.04e-12 | 68.2 |
MS.gene032113.t1 | MTR_2g098880 | 37.143 | 105 | 63 | 2 | 6 | 107 | 72 | 176 | 2.41e-12 | 68.2 |
MS.gene032113.t1 | MTR_7g028855 | 35.075 | 134 | 82 | 3 | 2 | 131 | 115 | 247 | 2.59e-12 | 70.1 |
MS.gene032113.t1 | MTR_2g098920 | 36.893 | 103 | 63 | 2 | 6 | 107 | 79 | 180 | 4.53e-12 | 67.4 |
MS.gene032113.t1 | MTR_1g055240 | 33.043 | 115 | 75 | 1 | 72 | 184 | 30 | 144 | 5.27e-12 | 64.7 |
MS.gene032113.t1 | MTR_3g006370 | 37.500 | 104 | 63 | 2 | 6 | 107 | 49 | 152 | 2.20e-11 | 64.7 |
MS.gene032113.t1 | MTR_1g008290 | 25.899 | 139 | 100 | 2 | 65 | 203 | 9 | 144 | 3.84e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene032113.t1 | AT4G38180 | 31.604 | 636 | 426 | 7 | 3 | 632 | 69 | 701 | 5.45e-111 | 353 |
MS.gene032113.t1 | AT4G15090 | 29.968 | 624 | 424 | 7 | 3 | 622 | 47 | 661 | 9.48e-98 | 320 |
MS.gene032113.t1 | AT4G15090 | 29.968 | 624 | 424 | 7 | 3 | 622 | 47 | 661 | 9.48e-98 | 320 |
MS.gene032113.t1 | AT4G15090 | 29.968 | 624 | 424 | 7 | 3 | 622 | 47 | 661 | 9.48e-98 | 320 |
MS.gene032113.t1 | AT4G15090 | 29.968 | 624 | 424 | 7 | 3 | 622 | 47 | 661 | 9.48e-98 | 320 |
MS.gene032113.t1 | AT4G15090 | 29.968 | 624 | 424 | 7 | 3 | 622 | 47 | 661 | 9.48e-98 | 320 |
MS.gene032113.t1 | AT3G22170 | 29.167 | 624 | 390 | 9 | 2 | 607 | 65 | 654 | 1.62e-88 | 295 |
MS.gene032113.t1 | AT3G22170 | 29.167 | 624 | 390 | 9 | 2 | 607 | 65 | 654 | 1.62e-88 | 295 |
MS.gene032113.t1 | AT1G76320 | 29.716 | 599 | 401 | 9 | 11 | 607 | 1 | 581 | 6.92e-82 | 273 |
MS.gene032113.t1 | AT1G76320 | 28.363 | 684 | 455 | 12 | 11 | 677 | 1 | 666 | 2.19e-81 | 273 |
MS.gene032113.t1 | AT1G76320 | 28.363 | 684 | 455 | 12 | 11 | 677 | 1 | 666 | 2.19e-81 | 273 |
MS.gene032113.t1 | AT1G76320 | 28.363 | 684 | 455 | 12 | 11 | 677 | 1 | 666 | 2.98e-81 | 273 |
MS.gene032113.t1 | AT2G27110 | 28.730 | 630 | 410 | 11 | 5 | 630 | 47 | 641 | 2.14e-75 | 259 |
MS.gene032113.t1 | AT2G27110 | 28.730 | 630 | 410 | 11 | 5 | 630 | 47 | 641 | 2.14e-75 | 259 |
MS.gene032113.t1 | AT3G06250 | 27.840 | 625 | 390 | 14 | 6 | 621 | 189 | 761 | 3.09e-75 | 258 |
MS.gene032113.t1 | AT3G06250 | 37.864 | 103 | 50 | 2 | 6 | 107 | 27 | 116 | 8.57e-14 | 75.5 |
MS.gene032113.t1 | AT3G06250 | 27.840 | 625 | 390 | 14 | 6 | 621 | 189 | 761 | 3.09e-75 | 258 |
MS.gene032113.t1 | AT3G06250 | 37.864 | 103 | 50 | 2 | 6 | 107 | 27 | 116 | 8.57e-14 | 75.5 |
MS.gene032113.t1 | AT3G06250 | 27.840 | 625 | 390 | 14 | 6 | 621 | 189 | 761 | 3.09e-75 | 258 |
MS.gene032113.t1 | AT3G06250 | 37.864 | 103 | 50 | 2 | 6 | 107 | 27 | 116 | 8.57e-14 | 75.5 |
MS.gene032113.t1 | AT5G18960 | 26.603 | 624 | 402 | 14 | 6 | 621 | 210 | 785 | 4.05e-69 | 241 |
MS.gene032113.t1 | AT5G18960 | 37.864 | 103 | 50 | 2 | 6 | 107 | 42 | 131 | 2.48e-13 | 73.9 |
MS.gene032113.t1 | AT5G18960 | 26.603 | 624 | 402 | 14 | 6 | 621 | 210 | 785 | 4.05e-69 | 241 |
MS.gene032113.t1 | AT5G18960 | 37.864 | 103 | 50 | 2 | 6 | 107 | 42 | 131 | 2.48e-13 | 73.9 |
MS.gene032113.t1 | AT2G27110 | 28.988 | 514 | 342 | 7 | 119 | 630 | 4 | 496 | 2.44e-67 | 235 |
MS.gene032113.t1 | AT4G19990 | 26.290 | 601 | 385 | 8 | 10 | 593 | 24 | 583 | 3.95e-66 | 232 |
MS.gene032113.t1 | AT4G19990 | 26.290 | 601 | 385 | 8 | 10 | 593 | 24 | 583 | 3.95e-66 | 232 |
MS.gene032113.t1 | AT1G52520 | 27.241 | 569 | 385 | 10 | 7 | 563 | 85 | 636 | 4.17e-66 | 231 |
MS.gene032113.t1 | AT4G19990 | 26.290 | 601 | 385 | 8 | 10 | 593 | 24 | 583 | 4.56e-66 | 232 |
MS.gene032113.t1 | AT4G19990 | 26.290 | 601 | 385 | 8 | 10 | 593 | 38 | 597 | 5.96e-66 | 232 |
MS.gene032113.t1 | AT4G19990 | 26.290 | 601 | 385 | 8 | 10 | 593 | 24 | 583 | 1.12e-65 | 231 |
MS.gene032113.t1 | AT4G19990 | 26.290 | 601 | 385 | 8 | 10 | 593 | 24 | 583 | 1.12e-65 | 231 |
MS.gene032113.t1 | AT4G38170 | 31.008 | 387 | 260 | 4 | 181 | 565 | 18 | 399 | 7.25e-63 | 219 |
MS.gene032113.t1 | AT4G19990 | 26.372 | 565 | 358 | 8 | 46 | 593 | 3 | 526 | 3.89e-61 | 218 |
MS.gene032113.t1 | AT2G32250 | 25.525 | 619 | 401 | 11 | 10 | 622 | 41 | 605 | 7.31e-60 | 215 |
MS.gene032113.t1 | AT2G32250 | 25.687 | 619 | 400 | 11 | 10 | 622 | 41 | 605 | 1.49e-59 | 215 |
MS.gene032113.t1 | AT2G32250 | 25.687 | 619 | 400 | 11 | 10 | 622 | 41 | 605 | 1.49e-59 | 215 |
MS.gene032113.t1 | AT2G32250 | 25.687 | 619 | 400 | 11 | 10 | 622 | 41 | 605 | 1.49e-59 | 215 |
MS.gene032113.t1 | AT2G32250 | 25.687 | 619 | 400 | 11 | 10 | 622 | 41 | 605 | 1.61e-59 | 215 |
MS.gene032113.t1 | AT2G32250 | 25.687 | 619 | 400 | 11 | 10 | 622 | 41 | 605 | 1.61e-59 | 215 |
MS.gene032113.t1 | AT2G32250 | 25.566 | 618 | 400 | 11 | 11 | 622 | 1 | 564 | 6.95e-59 | 212 |
MS.gene032113.t1 | AT2G32250 | 25.566 | 618 | 400 | 11 | 11 | 622 | 1 | 564 | 8.68e-59 | 212 |
MS.gene032113.t1 | AT1G80010 | 26.101 | 613 | 414 | 17 | 3 | 591 | 91 | 688 | 5.21e-58 | 209 |
MS.gene032113.t1 | AT1G10240 | 26.795 | 571 | 395 | 13 | 4 | 562 | 45 | 604 | 1.24e-55 | 202 |
MS.gene032113.t1 | AT1G10240 | 26.795 | 571 | 395 | 13 | 4 | 562 | 45 | 604 | 1.24e-55 | 202 |
MS.gene032113.t1 | AT5G28530 | 24.000 | 625 | 411 | 16 | 7 | 597 | 55 | 649 | 7.11e-47 | 177 |
MS.gene032113.t1 | AT5G28530 | 24.000 | 625 | 407 | 17 | 7 | 597 | 55 | 645 | 5.02e-46 | 174 |
MS.gene032113.t1 | AT5G28530 | 24.000 | 625 | 407 | 17 | 7 | 597 | 55 | 645 | 5.02e-46 | 174 |
MS.gene032113.t1 | AT5G28530 | 22.705 | 599 | 358 | 18 | 7 | 580 | 55 | 573 | 1.72e-30 | 127 |
MS.gene032113.t1 | AT5G28530 | 22.705 | 599 | 354 | 19 | 7 | 580 | 55 | 569 | 1.36e-29 | 125 |
MS.gene032113.t1 | AT3G59470 | 39.252 | 107 | 63 | 2 | 2 | 107 | 65 | 170 | 2.90e-14 | 73.6 |
MS.gene032113.t1 | AT3G59470 | 39.252 | 107 | 63 | 2 | 2 | 107 | 65 | 170 | 2.90e-14 | 73.6 |
MS.gene032113.t1 | AT3G59470 | 39.252 | 107 | 63 | 2 | 2 | 107 | 77 | 182 | 4.04e-14 | 73.6 |
MS.gene032113.t1 | AT3G07500 | 37.500 | 104 | 64 | 1 | 5 | 107 | 31 | 134 | 7.52e-13 | 68.9 |
MS.gene032113.t1 | AT2G43280 | 33.562 | 146 | 89 | 5 | 6 | 146 | 21 | 163 | 8.20e-12 | 65.5 |
Find 126 sgRNAs with CRISPR-Local
Find 150 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACAAATCACAAACATATTT+TGG | 0.063768 | 2.2:-14846905 | MS.gene032113:CDS |
TAGATACGACTTGGCAATTT+TGG | 0.122360 | 2.2:-14847481 | MS.gene032113:CDS |
CGATGTGTACTAAACAATTT+AGG | 0.280754 | 2.2:+14845787 | None:intergenic |
TTTGCTAGCAGCTAAGAATA+AGG | 0.286355 | 2.2:+14846086 | None:intergenic |
TTTCGGTGATGTAGTTTCTT+TGG | 0.287406 | 2.2:-14846850 | MS.gene032113:CDS |
GAAAGACAAAAGATCCTCTT+TGG | 0.289157 | 2.2:-14847342 | MS.gene032113:CDS |
GGCTGATGCAAGAATGATAT+TGG | 0.289765 | 2.2:-14846883 | MS.gene032113:CDS |
TTGATCTATTTGATAACAAT+TGG | 0.292503 | 2.2:-14846428 | MS.gene032113:CDS |
TGCGAAACCGATTGTTGGTT+TGG | 0.298872 | 2.2:-14847516 | MS.gene032113:CDS |
CATTCTCTATTTCTCGTAAC+CGG | 0.307524 | 2.2:+14845647 | None:intergenic |
ATATTGGATTATGGATATTT+CGG | 0.311385 | 2.2:-14846867 | MS.gene032113:CDS |
ACATGGCATTTGATGCAAAA+TGG | 0.313268 | 2.2:-14846576 | MS.gene032113:CDS |
CTTTAGCCATTGCTTGGGCT+TGG | 0.339011 | 2.2:+14846640 | None:intergenic |
ATCGAAATGGCAGAGGAATC+TGG | 0.346573 | 2.2:-14847140 | MS.gene032113:CDS |
GCAAGAATGATATTGGATTA+TGG | 0.358291 | 2.2:-14846876 | MS.gene032113:CDS |
GGTGTTATTATTGATCATAT+TGG | 0.368709 | 2.2:-14845829 | MS.gene032113:CDS |
AAAGGATTGTGCCTCTATAA+TGG | 0.369850 | 2.2:+14846769 | None:intergenic |
AGACGGAATGAAATTCTTAC+TGG | 0.375408 | 2.2:+14847284 | None:intergenic |
GGCTTAATCTTAAACCCCTT+TGG | 0.375508 | 2.2:+14845574 | None:intergenic |
TATGGTAAGAAATGTGGTTT+TGG | 0.376185 | 2.2:-14847452 | MS.gene032113:CDS |
TCTACATAAGCTTGTAGAAA+AGG | 0.378913 | 2.2:-14845704 | MS.gene032113:CDS |
TTGAACAAACGAAAGGTAGA+TGG | 0.405470 | 2.2:-14847413 | MS.gene032113:CDS |
CTAGTGCTTTAGCCATTGCT+TGG | 0.405838 | 2.2:+14846634 | None:intergenic |
TCTCATACAAGCCTTAAAAC+TGG | 0.407408 | 2.2:+14846302 | None:intergenic |
TAGTGCTTTAGCCATTGCTT+GGG | 0.410561 | 2.2:+14846635 | None:intergenic |
ATAGTAGTGCAGCCCCAAAA+AGG | 0.420352 | 2.2:+14846751 | None:intergenic |
ATGCTCCACTATGATTAGAT+TGG | 0.422356 | 2.2:-14845752 | MS.gene032113:CDS |
ACCTAGGTTGCTTGATGAAA+GGG | 0.423781 | 2.2:-14846545 | MS.gene032113:CDS |
TATTGATCATATTGGAAATG+AGG | 0.429689 | 2.2:-14845821 | MS.gene032113:CDS |
CATAACCCATGTCGAGTCTC+TGG | 0.431181 | 2.2:+14846600 | None:intergenic |
TCAGGCTTTAACCATTATAG+AGG | 0.434996 | 2.2:-14846780 | MS.gene032113:CDS |
CTACATAAGCTTGTAGAAAA+GGG | 0.435662 | 2.2:-14845703 | MS.gene032113:CDS |
TGATCTATTTGATAACAATT+GGG | 0.442178 | 2.2:-14846427 | MS.gene032113:CDS |
CATGATATAGAGAAAGTTGT+TGG | 0.444784 | 2.2:+14845979 | None:intergenic |
AAGGGGTTTAAGATTAAGCC+TGG | 0.452760 | 2.2:-14845571 | MS.gene032113:CDS |
TTTCAACCTACTGCCCTCCT+TGG | 0.458502 | 2.2:+14847361 | None:intergenic |
GACAACGTAGCATGGTGTAT+GGG | 0.459098 | 2.2:-14847013 | MS.gene032113:CDS |
CCTAGGGCTGATACGAGATC+AGG | 0.459959 | 2.2:-14847311 | MS.gene032113:CDS |
CATGGCATTTGATGCAAAAT+GGG | 0.461652 | 2.2:-14846575 | MS.gene032113:CDS |
TTTCTGTGTGTTGTAAAAGA+TGG | 0.462097 | 2.2:+14847216 | None:intergenic |
AGACAACGTAGCATGGTGTA+TGG | 0.465057 | 2.2:-14847014 | MS.gene032113:CDS |
TGTTATCACCATGTTTAAAG+TGG | 0.466829 | 2.2:-14846028 | MS.gene032113:CDS |
CAACAACTTTCTCAAAGTGT+TGG | 0.474048 | 2.2:+14846253 | None:intergenic |
CGGCAGATTTGTTTGTTCCA+AGG | 0.478536 | 2.2:-14847378 | MS.gene032113:CDS |
GTGTTGTAAAAGATGGTTGT+GGG | 0.481849 | 2.2:+14847223 | None:intergenic |
ATTTCATTCCGTCTAAGAGA+TGG | 0.482262 | 2.2:-14847275 | MS.gene032113:CDS |
CTCTGCCATTTCGATCTCAT+AGG | 0.485355 | 2.2:+14847148 | None:intergenic |
TTGGGCTTGGTCAGTGAACA+AGG | 0.489076 | 2.2:+14846653 | None:intergenic |
GAATGTTGATATCTTATCCT+TGG | 0.489846 | 2.2:+14846177 | None:intergenic |
TGGTCAGTGAACAAGGTTTG+AGG | 0.493511 | 2.2:+14846660 | None:intergenic |
AATTGGGTGAAATCAATGTA+TGG | 0.495445 | 2.2:-14846411 | MS.gene032113:CDS |
CTTAATGCGAAACCGATTGT+TGG | 0.498271 | 2.2:-14847521 | MS.gene032113:CDS |
TGTGCGAGTTGCATTAGAAT+CGG | 0.498318 | 2.2:+14846153 | None:intergenic |
TCAAATTCCAAACCAACAAT+CGG | 0.498729 | 2.2:+14847509 | None:intergenic |
ATCAATAATAACACCATCAC+GGG | 0.502589 | 2.2:+14845837 | None:intergenic |
GTAGATGGCTTGATTACATC+CGG | 0.508373 | 2.2:-14847398 | MS.gene032113:CDS |
GAATATGAGTCACAACCAAA+GGG | 0.510834 | 2.2:-14845589 | MS.gene032113:CDS |
ATGGTGATAACATATTCAAA+TGG | 0.513168 | 2.2:+14846039 | None:intergenic |
ATCACCATGTTTAAAGTGGA+AGG | 0.514926 | 2.2:-14846024 | MS.gene032113:CDS |
CTCGACATGGGTTATGTACA+TGG | 0.515437 | 2.2:-14846593 | MS.gene032113:CDS |
CACCTAGGTTGCTTGATGAA+AGG | 0.515698 | 2.2:-14846546 | MS.gene032113:CDS |
ATGATGGATTGTCCAACATC+TGG | 0.516109 | 2.2:+14846958 | None:intergenic |
GTATGTAATACATGAGTTTG+AGG | 0.516337 | 2.2:-14847249 | MS.gene032113:CDS |
CTCTCCTTCCACTTTAAACA+TGG | 0.523398 | 2.2:+14846020 | None:intergenic |
AAACCGCTGACTCATTCAAA+TGG | 0.528647 | 2.2:-14846722 | MS.gene032113:CDS |
AGGTGAAGTTTGAAGCAGCT+TGG | 0.529588 | 2.2:-14846470 | MS.gene032113:CDS |
TGATATGCGTGGTAAAATGA+TGG | 0.529588 | 2.2:+14846942 | None:intergenic |
TTTGTTCCAAGGAGGGCAGT+AGG | 0.531121 | 2.2:-14847367 | MS.gene032113:CDS |
TTTCATTCCGTCTAAGAGAT+GGG | 0.532627 | 2.2:-14847274 | MS.gene032113:CDS |
AGCATGGTGTATGGGGAAGT+TGG | 0.534278 | 2.2:-14847005 | MS.gene032113:CDS |
TTTGATCTTTGACGTGGTGT+AGG | 0.536468 | 2.2:+14845472 | None:intergenic |
TAATCTCGGATTTACACGAT+TGG | 0.536812 | 2.2:-14847063 | MS.gene032113:CDS |
CATACTTCCCATCTCTTAGA+CGG | 0.539409 | 2.2:+14847267 | None:intergenic |
CTTGGAACAAACAAATCTGC+CGG | 0.541110 | 2.2:+14847379 | None:intergenic |
AGCTGCCAATCTAATCATAG+TGG | 0.546809 | 2.2:+14845747 | None:intergenic |
ATTCTCTATTTCTCGTAACC+GGG | 0.548252 | 2.2:+14845648 | None:intergenic |
TGAAGCAGCTTGGAGCAAGT+TGG | 0.550033 | 2.2:-14846460 | MS.gene032113:CDS |
AGAATATGAGTCACAACCAA+AGG | 0.553725 | 2.2:-14845590 | MS.gene032113:CDS |
TCAAGCCTATGAGATCGAAA+TGG | 0.558373 | 2.2:-14847153 | MS.gene032113:CDS |
TTTGTATGACTTGTGTAAGC+TGG | 0.560502 | 2.2:-14845680 | MS.gene032113:CDS |
ACACTTTGAGAAAGTTGTTG+AGG | 0.561537 | 2.2:-14846250 | MS.gene032113:CDS |
CCTGATCTCGTATCAGCCCT+AGG | 0.564208 | 2.2:+14847311 | None:intergenic |
AGATTTGTTTGTTCCAAGGA+GGG | 0.566275 | 2.2:-14847374 | MS.gene032113:CDS |
CCCCTTTCATCAAGCAACCT+AGG | 0.566470 | 2.2:+14846544 | None:intergenic |
TGTGTTGTAAAAGATGGTTG+TGG | 0.567063 | 2.2:+14847222 | None:intergenic |
ATGAACAAAGCTATCACACT+TGG | 0.569240 | 2.2:-14846360 | MS.gene032113:CDS |
GTTGAATATGGTAAGAAATG+TGG | 0.571393 | 2.2:-14847458 | MS.gene032113:CDS |
CAGATTTGTTTGTTCCAAGG+AGG | 0.577739 | 2.2:-14847375 | MS.gene032113:CDS |
TCATGCATTAAAAGTCATTG+AGG | 0.578104 | 2.2:-14845917 | MS.gene032113:CDS |
TTGATAGCGTAGATACGACT+TGG | 0.578993 | 2.2:-14847490 | MS.gene032113:CDS |
TGTTTAAAGTGGAAGGAGAG+TGG | 0.579070 | 2.2:-14846017 | MS.gene032113:CDS |
CACAGTCCATTTGATATGCG+TGG | 0.579117 | 2.2:+14846931 | None:intergenic |
AGCAAGAAGACAACGTAGCA+TGG | 0.582684 | 2.2:-14847021 | MS.gene032113:CDS |
TTTAAGGCTTGTATGAGACC+TGG | 0.585363 | 2.2:-14846297 | MS.gene032113:CDS |
GCAGGAGGTAGAACTAATCT+CGG | 0.585710 | 2.2:-14847077 | MS.gene032113:CDS |
CATGTATGAATACGATCAAG+AGG | 0.589868 | 2.2:-14846490 | MS.gene032113:CDS |
CAACTTATGAGCACACAGGC+AGG | 0.592345 | 2.2:-14847095 | MS.gene032113:CDS |
AAGCCTGAAAATAATGCAAG+TGG | 0.596112 | 2.2:+14846795 | None:intergenic |
TGACTTGTGTAAGCTGGTGA+TGG | 0.596476 | 2.2:-14845674 | MS.gene032113:CDS |
CACTGACCAAGCCCAAGCAA+TGG | 0.599270 | 2.2:-14846646 | MS.gene032113:CDS |
ACAACGTAGCATGGTGTATG+GGG | 0.603463 | 2.2:-14847012 | MS.gene032113:CDS |
GATCAATAATAACACCATCA+CGG | 0.609274 | 2.2:+14845836 | None:intergenic |
TACACCTTTGATCTTTGACG+TGG | 0.609768 | 2.2:+14845466 | None:intergenic |
ATAGAGAATGCTGATGATGA+AGG | 0.609789 | 2.2:-14845634 | MS.gene032113:CDS |
TAACCATTTGAATGAGTCAG+CGG | 0.612529 | 2.2:+14846719 | None:intergenic |
GAAACATTTCTTGAAGCACA+TGG | 0.613854 | 2.2:-14846693 | MS.gene032113:CDS |
AAGTGGTCGATTAGCACGGT+TGG | 0.614021 | 2.2:+14846812 | None:intergenic |
CTATGAGATCGAAATGGCAG+AGG | 0.614810 | 2.2:-14847147 | MS.gene032113:CDS |
CCTAGGTTGCTTGATGAAAG+GGG | 0.618212 | 2.2:-14846544 | MS.gene032113:CDS |
ATGCAAGTGGTCGATTAGCA+CGG | 0.619115 | 2.2:+14846808 | None:intergenic |
GTAAGCTGGTGATGGAGGCC+CGG | 0.626121 | 2.2:-14845666 | MS.gene032113:CDS |
TACACCACGTCAAAGATCAA+AGG | 0.627890 | 2.2:-14845470 | MS.gene032113:CDS |
CTAGGGCTGATACGAGATCA+GGG | 0.628499 | 2.2:-14847310 | MS.gene032113:CDS |
CTTGTGTAAGCTGGTGATGG+AGG | 0.636254 | 2.2:-14845671 | MS.gene032113:CDS |
GTGATGCCAGAGACTCGACA+TGG | 0.645053 | 2.2:-14846606 | MS.gene032113:CDS |
CAAAATGGGATCAAACACCT+AGG | 0.665706 | 2.2:-14846561 | MS.gene032113:CDS |
TGATTACTTGAACAAACGAA+AGG | 0.666107 | 2.2:-14847420 | MS.gene032113:CDS |
CTAGGTTGCTTGATGAAAGG+GGG | 0.671384 | 2.2:-14846543 | MS.gene032113:CDS |
AATTGAATAACACTGATACC+AGG | 0.672015 | 2.2:+14846279 | None:intergenic |
ATTTCAACTTATGAGCACAC+AGG | 0.673642 | 2.2:-14847099 | MS.gene032113:CDS |
AATGGCTAAAGCACTAGTTG+AGG | 0.676750 | 2.2:-14846628 | MS.gene032113:CDS |
TGGACAAGAGATGCCCGTGA+TGG | 0.687751 | 2.2:-14845850 | MS.gene032113:CDS |
CTTATGAGCACACAGGCAGG+AGG | 0.695932 | 2.2:-14847092 | MS.gene032113:CDS |
AGTCTCGACATAAACTACCA+AGG | 0.709308 | 2.2:-14846194 | MS.gene032113:CDS |
AATATGAGTCACAACCAAAG+GGG | 0.711774 | 2.2:-14845588 | MS.gene032113:CDS |
TGATGCCAGAGACTCGACAT+GGG | 0.714570 | 2.2:-14846605 | MS.gene032113:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATTGGATTATGGATATTT+CGG | - | chr2.2:14846125-14846144 | MS.gene032113:CDS | 20.0% |
!! | ATCAATACATCTTAAAAAGA+TGG | - | chr2.2:14847122-14847141 | MS.gene032113:CDS | 20.0% |
!!! | AACAAATCACAAACATATTT+TGG | - | chr2.2:14846087-14846106 | MS.gene032113:CDS | 20.0% |
!!! | ACAAATCACAAACATATTTT+GGG | - | chr2.2:14846088-14846107 | MS.gene032113:CDS | 20.0% |
!!! | CTTTTTAAGATGTATTGATT+GGG | + | chr2.2:14847121-14847140 | None:intergenic | 20.0% |
!!! | TCTTTTTAAGATGTATTGAT+TGG | + | chr2.2:14847122-14847141 | None:intergenic | 20.0% |
!!! | TGATCTATTTGATAACAATT+GGG | - | chr2.2:14846565-14846584 | MS.gene032113:CDS | 20.0% |
!!! | TGTAAAAAATTTGAGACTTT+TGG | - | chr2.2:14847040-14847059 | MS.gene032113:CDS | 20.0% |
!!! | TTGATCTATTTGATAACAAT+TGG | - | chr2.2:14846564-14846583 | MS.gene032113:CDS | 20.0% |
!!! | TTTTTAAGATGTATTGATTG+GGG | + | chr2.2:14847120-14847139 | None:intergenic | 20.0% |
! | ATGGTGATAACATATTCAAA+TGG | + | chr2.2:14846956-14846975 | None:intergenic | 25.0% |
! | TATTGATCATATTGGAAATG+AGG | - | chr2.2:14847171-14847190 | MS.gene032113:CDS | 25.0% |
!! | ATATTCTTTTGTTACTGTTG+GGG | + | chr2.2:14847389-14847408 | None:intergenic | 25.0% |
!! | CATATTCTTTTGTTACTGTT+GGG | + | chr2.2:14847390-14847409 | None:intergenic | 25.0% |
!! | GAGTTTAAATTCCAGTTTTA+AGG | - | chr2.2:14846679-14846698 | MS.gene032113:CDS | 25.0% |
!! | TCATATTCTTTTGTTACTGT+TGG | + | chr2.2:14847391-14847410 | None:intergenic | 25.0% |
!!! | GGTGTTATTATTGATCATAT+TGG | - | chr2.2:14847163-14847182 | MS.gene032113:CDS | 25.0% |
AATTGAATAACACTGATACC+AGG | + | chr2.2:14846716-14846735 | None:intergenic | 30.0% | |
AATTGGGTGAAATCAATGTA+TGG | - | chr2.2:14846581-14846600 | MS.gene032113:CDS | 30.0% | |
ATCAATAATAACACCATCAC+GGG | + | chr2.2:14847158-14847177 | None:intergenic | 30.0% | |
CATGATATAGAGAAAGTTGT+TGG | + | chr2.2:14847016-14847035 | None:intergenic | 30.0% | |
CGATGTGTACTAAACAATTT+AGG | + | chr2.2:14847208-14847227 | None:intergenic | 30.0% | |
CTACATAAGCTTGTAGAAAA+GGG | - | chr2.2:14847289-14847308 | MS.gene032113:CDS | 30.0% | |
GAATGTTGATATCTTATCCT+TGG | + | chr2.2:14846818-14846837 | None:intergenic | 30.0% | |
GATCAATAATAACACCATCA+CGG | + | chr2.2:14847159-14847178 | None:intergenic | 30.0% | |
GCAAGAATGATATTGGATTA+TGG | - | chr2.2:14846116-14846135 | MS.gene032113:CDS | 30.0% | |
GTATGGTATCAAGCAAAAAT+GGG | - | chr2.2:14846598-14846617 | MS.gene032113:CDS | 30.0% | |
GTATGTAATACATGAGTTTG+AGG | - | chr2.2:14845743-14845762 | MS.gene032113:CDS | 30.0% | |
GTTGAATATGGTAAGAAATG+TGG | - | chr2.2:14845534-14845553 | MS.gene032113:CDS | 30.0% | |
TCAAATTCCAAACCAACAAT+CGG | + | chr2.2:14845486-14845505 | None:intergenic | 30.0% | |
TCATGCATTAAAAGTCATTG+AGG | - | chr2.2:14847075-14847094 | MS.gene032113:CDS | 30.0% | |
TCTACATAAGCTTGTAGAAA+AGG | - | chr2.2:14847288-14847307 | MS.gene032113:CDS | 30.0% | |
TGATTACTTGAACAAACGAA+AGG | - | chr2.2:14845572-14845591 | MS.gene032113:CDS | 30.0% | |
TGTATGGTATCAAGCAAAAA+TGG | - | chr2.2:14846597-14846616 | MS.gene032113:CDS | 30.0% | |
TGTTATCACCATGTTTAAAG+TGG | - | chr2.2:14846964-14846983 | MS.gene032113:CDS | 30.0% | |
TTTCTGTGTGTTGTAAAAGA+TGG | + | chr2.2:14845779-14845798 | None:intergenic | 30.0% | |
! | ATTTTACCACGCATATCAAA+TGG | - | chr2.2:14846055-14846074 | MS.gene032113:CDS | 30.0% |
! | TATGGTAAGAAATGTGGTTT+TGG | - | chr2.2:14845540-14845559 | MS.gene032113:CDS | 30.0% |
AAAGGATTGTGCCTCTATAA+TGG | + | chr2.2:14846226-14846245 | None:intergenic | 35.0% | |
AAGCCTGAAAATAATGCAAG+TGG | + | chr2.2:14846200-14846219 | None:intergenic | 35.0% | |
AATATGAGTCACAACCAAAG+GGG | - | chr2.2:14847404-14847423 | MS.gene032113:CDS | 35.0% | |
ACATGGCATTTGATGCAAAA+TGG | - | chr2.2:14846416-14846435 | MS.gene032113:CDS | 35.0% | |
AGAATATGAGTCACAACCAA+AGG | - | chr2.2:14847402-14847421 | MS.gene032113:CDS | 35.0% | |
AGACGGAATGAAATTCTTAC+TGG | + | chr2.2:14845711-14845730 | None:intergenic | 35.0% | |
ATGAACAAAGCTATCACACT+TGG | - | chr2.2:14846632-14846651 | MS.gene032113:CDS | 35.0% | |
ATGCTCCACTATGATTAGAT+TGG | - | chr2.2:14847240-14847259 | MS.gene032113:CDS | 35.0% | |
ATTTCAACTTATGAGCACAC+AGG | - | chr2.2:14845893-14845912 | MS.gene032113:CDS | 35.0% | |
ATTTCATTCCGTCTAAGAGA+TGG | - | chr2.2:14845717-14845736 | MS.gene032113:CDS | 35.0% | |
CAACAACTTTCTCAAAGTGT+TGG | + | chr2.2:14846742-14846761 | None:intergenic | 35.0% | |
CATGGCATTTGATGCAAAAT+GGG | - | chr2.2:14846417-14846436 | MS.gene032113:CDS | 35.0% | |
CATGTATGAATACGATCAAG+AGG | - | chr2.2:14846502-14846521 | MS.gene032113:CDS | 35.0% | |
CTCTTTGGTTAAAAAGCCTA+GGG | - | chr2.2:14845665-14845684 | MS.gene032113:CDS | 35.0% | |
GAAACATTTCTTGAAGCACA+TGG | - | chr2.2:14846299-14846318 | MS.gene032113:CDS | 35.0% | |
GAAAGACAAAAGATCCTCTT+TGG | - | chr2.2:14845650-14845669 | MS.gene032113:CDS | 35.0% | |
GAATATGAGTCACAACCAAA+GGG | - | chr2.2:14847403-14847422 | MS.gene032113:CDS | 35.0% | |
GTGTTGTAAAAGATGGTTGT+GGG | + | chr2.2:14845772-14845791 | None:intergenic | 35.0% | |
TAACCATTTGAATGAGTCAG+CGG | + | chr2.2:14846276-14846295 | None:intergenic | 35.0% | |
TAATCTCGGATTTACACGAT+TGG | - | chr2.2:14845929-14845948 | MS.gene032113:CDS | 35.0% | |
TCTCATACAAGCCTTAAAAC+TGG | + | chr2.2:14846693-14846712 | None:intergenic | 35.0% | |
TGATATGCGTGGTAAAATGA+TGG | + | chr2.2:14846053-14846072 | None:intergenic | 35.0% | |
TGTGTTGTAAAAGATGGTTG+TGG | + | chr2.2:14845773-14845792 | None:intergenic | 35.0% | |
TTGAACAAACGAAAGGTAGA+TGG | - | chr2.2:14845579-14845598 | MS.gene032113:CDS | 35.0% | |
TTTCATTCCGTCTAAGAGAT+GGG | - | chr2.2:14845718-14845737 | MS.gene032113:CDS | 35.0% | |
TTTCGGTGATGTAGTTTCTT+TGG | - | chr2.2:14846142-14846161 | MS.gene032113:CDS | 35.0% | |
TTTGCTAGCAGCTAAGAATA+AGG | + | chr2.2:14846909-14846928 | None:intergenic | 35.0% | |
! | ACACTTTGAGAAAGTTGTTG+AGG | - | chr2.2:14846742-14846761 | MS.gene032113:CDS | 35.0% |
! | AGATTTGTTTGTTCCAAGGA+GGG | - | chr2.2:14845618-14845637 | MS.gene032113:CDS | 35.0% |
! | ATAGAGAATGCTGATGATGA+AGG | - | chr2.2:14847358-14847377 | MS.gene032113:CDS | 35.0% |
! | ATCACCATGTTTAAAGTGGA+AGG | - | chr2.2:14846968-14846987 | MS.gene032113:CDS | 35.0% |
! | ATTCTCTATTTCTCGTAACC+GGG | + | chr2.2:14847347-14847366 | None:intergenic | 35.0% |
! | CATTCTCTATTTCTCGTAAC+CGG | + | chr2.2:14847348-14847367 | None:intergenic | 35.0% |
! | GTATTTTCAACACCAGATGT+TGG | - | chr2.2:14846022-14846041 | MS.gene032113:CDS | 35.0% |
! | TCAGGCTTTAACCATTATAG+AGG | - | chr2.2:14846212-14846231 | MS.gene032113:CDS | 35.0% |
! | TTTGTATGACTTGTGTAAGC+TGG | - | chr2.2:14847312-14847331 | MS.gene032113:CDS | 35.0% |
!! | AGATACGACTTGGCAATTTT+GGG | - | chr2.2:14845512-14845531 | MS.gene032113:CDS | 35.0% |
!! | ATAGAGGCACAATCCTTTTT+GGG | - | chr2.2:14846228-14846247 | MS.gene032113:CDS | 35.0% |
!! | TAGATACGACTTGGCAATTT+TGG | - | chr2.2:14845511-14845530 | MS.gene032113:CDS | 35.0% |
!! | TATAGAGGCACAATCCTTTT+TGG | - | chr2.2:14846227-14846246 | MS.gene032113:CDS | 35.0% |
!!! | TGGCAATTTTGGGTTGAATA+TGG | - | chr2.2:14845522-14845541 | MS.gene032113:CDS | 35.0% |
ACCTAGGTTGCTTGATGAAA+GGG | - | chr2.2:14846447-14846466 | MS.gene032113:CDS | 40.0% | |
AGCTGCCAATCTAATCATAG+TGG | + | chr2.2:14847248-14847267 | None:intergenic | 40.0% | |
AGTCTCGACATAAACTACCA+AGG | - | chr2.2:14846798-14846817 | MS.gene032113:CDS | 40.0% | |
CAAAATGGGATCAAACACCT+AGG | - | chr2.2:14846431-14846450 | MS.gene032113:CDS | 40.0% | |
CATACTTCCCATCTCTTAGA+CGG | + | chr2.2:14845728-14845747 | None:intergenic | 40.0% | |
CCTCTTTGGTTAAAAAGCCT+AGG | - | chr2.2:14845664-14845683 | MS.gene032113:CDS | 40.0% | |
CTCTCCTTCCACTTTAAACA+TGG | + | chr2.2:14846975-14846994 | None:intergenic | 40.0% | |
CTTAATGCGAAACCGATTGT+TGG | - | chr2.2:14845471-14845490 | MS.gene032113:CDS | 40.0% | |
CTTGGAACAAACAAATCTGC+CGG | + | chr2.2:14845616-14845635 | None:intergenic | 40.0% | |
GGCTGATGCAAGAATGATAT+TGG | - | chr2.2:14846109-14846128 | MS.gene032113:CDS | 40.0% | |
GGCTTAATCTTAAACCCCTT+TGG | + | chr2.2:14847421-14847440 | None:intergenic | 40.0% | |
GTAGATGGCTTGATTACATC+CGG | - | chr2.2:14845594-14845613 | MS.gene032113:CDS | 40.0% | |
TACACCACGTCAAAGATCAA+AGG | - | chr2.2:14847522-14847541 | MS.gene032113:CDS | 40.0% | |
TACACCTTTGATCTTTGACG+TGG | + | chr2.2:14847529-14847548 | None:intergenic | 40.0% | |
TAGTGCTTTAGCCATTGCTT+GGG | + | chr2.2:14846360-14846379 | None:intergenic | 40.0% | |
TCAAGCCTATGAGATCGAAA+TGG | - | chr2.2:14845839-14845858 | MS.gene032113:CDS | 40.0% | |
TGTGCGAGTTGCATTAGAAT+CGG | + | chr2.2:14846842-14846861 | None:intergenic | 40.0% | |
TTTGATCTTTGACGTGGTGT+AGG | + | chr2.2:14847523-14847542 | None:intergenic | 40.0% | |
! | AAGGGGTTTAAGATTAAGCC+TGG | - | chr2.2:14847421-14847440 | MS.gene032113:CDS | 40.0% |
! | AATGGCTAAAGCACTAGTTG+AGG | - | chr2.2:14846364-14846383 | MS.gene032113:CDS | 40.0% |
! | CAGATTTGTTTGTTCCAAGG+AGG | - | chr2.2:14845617-14845636 | MS.gene032113:CDS | 40.0% |
! | CCTAGGCTTTTTAACCAAAG+AGG | + | chr2.2:14845667-14845686 | None:intergenic | 40.0% |
! | CGACCACTTGCATTATTTTC+AGG | - | chr2.2:14846194-14846213 | MS.gene032113:CDS | 40.0% |
! | CGTCTACGATTTTGTAATCC+AGG | + | chr2.2:14847442-14847461 | None:intergenic | 40.0% |
! | TGTTTAAAGTGGAAGGAGAG+TGG | - | chr2.2:14846975-14846994 | MS.gene032113:CDS | 40.0% |
! | TTTAAGGCTTGTATGAGACC+TGG | - | chr2.2:14846695-14846714 | MS.gene032113:CDS | 40.0% |
!! | AAACCGCTGACTCATTCAAA+TGG | - | chr2.2:14846270-14846289 | MS.gene032113:CDS | 40.0% |
!! | ATGATGGATTGTCCAACATC+TGG | + | chr2.2:14846037-14846056 | None:intergenic | 40.0% |
!! | TAGAGGCACAATCCTTTTTG+GGG | - | chr2.2:14846229-14846248 | MS.gene032113:CDS | 40.0% |
!! | TTGATAGCGTAGATACGACT+TGG | - | chr2.2:14845502-14845521 | MS.gene032113:CDS | 40.0% |
ACAACGTAGCATGGTGTATG+GGG | - | chr2.2:14845980-14845999 | MS.gene032113:CDS | 45.0% | |
AGACAACGTAGCATGGTGTA+TGG | - | chr2.2:14845978-14845997 | MS.gene032113:CDS | 45.0% | |
AGCAAGAAGACAACGTAGCA+TGG | - | chr2.2:14845971-14845990 | MS.gene032113:CDS | 45.0% | |
ATAGTAGTGCAGCCCCAAAA+AGG | + | chr2.2:14846244-14846263 | None:intergenic | 45.0% | |
ATCGAAATGGCAGAGGAATC+TGG | - | chr2.2:14845852-14845871 | MS.gene032113:CDS | 45.0% | |
ATGCAAGTGGTCGATTAGCA+CGG | + | chr2.2:14846187-14846206 | None:intergenic | 45.0% | |
CACAGTCCATTTGATATGCG+TGG | + | chr2.2:14846064-14846083 | None:intergenic | 45.0% | |
CACCTAGGTTGCTTGATGAA+AGG | - | chr2.2:14846446-14846465 | MS.gene032113:CDS | 45.0% | |
CCTAGGTTGCTTGATGAAAG+GGG | - | chr2.2:14846448-14846467 | MS.gene032113:CDS | 45.0% | |
CTAGGTTGCTTGATGAAAGG+GGG | - | chr2.2:14846449-14846468 | MS.gene032113:CDS | 45.0% | |
CTAGTGCTTTAGCCATTGCT+TGG | + | chr2.2:14846361-14846380 | None:intergenic | 45.0% | |
CTATGAGATCGAAATGGCAG+AGG | - | chr2.2:14845845-14845864 | MS.gene032113:CDS | 45.0% | |
GACAACGTAGCATGGTGTAT+GGG | - | chr2.2:14845979-14845998 | MS.gene032113:CDS | 45.0% | |
GCAGGAGGTAGAACTAATCT+CGG | - | chr2.2:14845915-14845934 | MS.gene032113:CDS | 45.0% | |
TGGTCAGTGAACAAGGTTTG+AGG | + | chr2.2:14846335-14846354 | None:intergenic | 45.0% | |
! | AGGTGAAGTTTGAAGCAGCT+TGG | - | chr2.2:14846522-14846541 | MS.gene032113:CDS | 45.0% |
! | CGGCAGATTTGTTTGTTCCA+AGG | - | chr2.2:14845614-14845633 | MS.gene032113:CDS | 45.0% |
! | CTCGACATGGGTTATGTACA+TGG | - | chr2.2:14846399-14846418 | MS.gene032113:CDS | 45.0% |
! | CTCTGCCATTTCGATCTCAT+AGG | + | chr2.2:14845847-14845866 | None:intergenic | 45.0% |
! | TGACTTGTGTAAGCTGGTGA+TGG | - | chr2.2:14847318-14847337 | MS.gene032113:CDS | 45.0% |
! | TGCGAAACCGATTGTTGGTT+TGG | - | chr2.2:14845476-14845495 | MS.gene032113:CDS | 45.0% |
AAGTGGTCGATTAGCACGGT+TGG | + | chr2.2:14846183-14846202 | None:intergenic | 50.0% | |
AGCATGGTGTATGGGGAAGT+TGG | - | chr2.2:14845987-14846006 | MS.gene032113:CDS | 50.0% | |
CAACTTATGAGCACACAGGC+AGG | - | chr2.2:14845897-14845916 | MS.gene032113:CDS | 50.0% | |
CATAACCCATGTCGAGTCTC+TGG | + | chr2.2:14846395-14846414 | None:intergenic | 50.0% | |
CCCCTTTCATCAAGCAACCT+AGG | + | chr2.2:14846451-14846470 | None:intergenic | 50.0% | |
CTAGGGCTGATACGAGATCA+GGG | - | chr2.2:14845682-14845701 | MS.gene032113:CDS | 50.0% | |
CTTTAGCCATTGCTTGGGCT+TGG | + | chr2.2:14846355-14846374 | None:intergenic | 50.0% | |
TGAAGCAGCTTGGAGCAAGT+TGG | - | chr2.2:14846532-14846551 | MS.gene032113:CDS | 50.0% | |
TGATGCCAGAGACTCGACAT+GGG | - | chr2.2:14846387-14846406 | MS.gene032113:CDS | 50.0% | |
TTTCAACCTACTGCCCTCCT+TGG | + | chr2.2:14845634-14845653 | None:intergenic | 50.0% | |
TTTGTTCCAAGGAGGGCAGT+AGG | - | chr2.2:14845625-14845644 | MS.gene032113:CDS | 50.0% | |
! | TTGGGCTTGGTCAGTGAACA+AGG | + | chr2.2:14846342-14846361 | None:intergenic | 50.0% |
!! | CTTGTGTAAGCTGGTGATGG+AGG | - | chr2.2:14847321-14847340 | MS.gene032113:CDS | 50.0% |
CACTGACCAAGCCCAAGCAA+TGG | - | chr2.2:14846346-14846365 | MS.gene032113:CDS | 55.0% | |
CCTAGGGCTGATACGAGATC+AGG | - | chr2.2:14845681-14845700 | MS.gene032113:CDS | 55.0% | |
CCTGATCTCGTATCAGCCCT+AGG | + | chr2.2:14845684-14845703 | None:intergenic | 55.0% | |
CTTATGAGCACACAGGCAGG+AGG | - | chr2.2:14845900-14845919 | MS.gene032113:CDS | 55.0% | |
GTGATGCCAGAGACTCGACA+TGG | - | chr2.2:14846386-14846405 | MS.gene032113:CDS | 55.0% | |
TGGACAAGAGATGCCCGTGA+TGG | - | chr2.2:14847142-14847161 | MS.gene032113:CDS | 55.0% | |
!! | GTAAGCTGGTGATGGAGGCC+CGG | - | chr2.2:14847326-14847345 | MS.gene032113:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 14845465 | 14847549 | 14845465 | ID=MS.gene032113 |
chr2.2 | mRNA | 14845465 | 14847549 | 14845465 | ID=MS.gene032113.t1;Parent=MS.gene032113 |
chr2.2 | exon | 14845465 | 14847549 | 14845465 | ID=MS.gene032113.t1.exon1;Parent=MS.gene032113.t1 |
chr2.2 | CDS | 14845465 | 14847549 | 14845465 | ID=cds.MS.gene032113.t1;Parent=MS.gene032113.t1 |
Gene Sequence |
Protein sequence |