Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene032126.t1 | XP_024632563.1 | 86.6 | 696 | 16 | 2 | 1 | 620 | 1 | 695 | 0.00E+00 | 1191 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene032126.t1 | Q6NQJ7 | 55.0 | 695 | 227 | 7 | 18 | 627 | 1 | 694 | 8.9e-209 | 728.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene032126.t1 | A0A396JDB2 | 86.6 | 696 | 16 | 2 | 1 | 620 | 1 | 695 | 0.0e+00 | 1191.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene032126.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene032126.t1 | MTR_1g008290 | 35.915 | 142 | 78 | 4 | 68 | 201 | 8 | 144 | 3.70e-21 | 90.5 |
MS.gene032126.t1 | MTR_3g006370 | 32.335 | 167 | 99 | 4 | 9 | 168 | 45 | 204 | 7.04e-19 | 86.7 |
MS.gene032126.t1 | MTR_0402s0040 | 34.848 | 132 | 79 | 4 | 7 | 133 | 21 | 150 | 2.15e-15 | 79.7 |
MS.gene032126.t1 | MTR_2g098880 | 36.634 | 101 | 59 | 1 | 18 | 113 | 65 | 165 | 3.20e-14 | 73.6 |
MS.gene032126.t1 | MTR_2g098880 | 36.634 | 101 | 59 | 1 | 18 | 113 | 77 | 177 | 3.73e-14 | 73.6 |
MS.gene032126.t1 | MTR_5g032260 | 41.975 | 81 | 41 | 2 | 49 | 124 | 302 | 381 | 2.17e-13 | 72.8 |
MS.gene032126.t1 | MTR_6g022070 | 24.519 | 208 | 142 | 3 | 223 | 420 | 1 | 203 | 4.34e-13 | 71.2 |
MS.gene032126.t1 | MTR_5g015480 | 27.830 | 212 | 136 | 6 | 14 | 214 | 56 | 261 | 1.15e-11 | 65.9 |
MS.gene032126.t1 | MTR_2g070590 | 33.636 | 110 | 67 | 3 | 7 | 112 | 12 | 119 | 3.01e-11 | 61.6 |
MS.gene032126.t1 | MTR_4g067290 | 33.036 | 112 | 69 | 3 | 10 | 117 | 112 | 221 | 3.79e-11 | 65.1 |
MS.gene032126.t1 | MTR_4g067290 | 33.036 | 112 | 69 | 3 | 10 | 117 | 52 | 161 | 4.19e-11 | 63.9 |
MS.gene032126.t1 | MTR_4g067290 | 33.036 | 112 | 69 | 3 | 10 | 117 | 72 | 181 | 4.39e-11 | 64.3 |
MS.gene032126.t1 | MTR_4g067290 | 33.036 | 112 | 69 | 3 | 10 | 117 | 52 | 161 | 4.56e-11 | 63.9 |
MS.gene032126.t1 | MTR_4g067290 | 33.036 | 112 | 69 | 3 | 10 | 117 | 70 | 179 | 4.56e-11 | 63.9 |
MS.gene032126.t1 | MTR_4g067290 | 33.036 | 112 | 69 | 3 | 10 | 117 | 72 | 181 | 4.67e-11 | 63.9 |
MS.gene032126.t1 | MTR_6g051425 | 24.171 | 211 | 138 | 6 | 21 | 213 | 24 | 230 | 6.15e-11 | 64.7 |
MS.gene032126.t1 | MTR_2g098920 | 33.036 | 112 | 69 | 3 | 10 | 117 | 76 | 185 | 7.85e-11 | 63.5 |
MS.gene032126.t1 | MTR_0856s0010 | 30.172 | 116 | 79 | 2 | 13 | 127 | 33 | 147 | 9.01e-11 | 61.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene032126.t1 | AT1G76320 | 56.132 | 424 | 177 | 5 | 214 | 629 | 274 | 696 | 3.99e-156 | 467 |
MS.gene032126.t1 | AT1G76320 | 73.232 | 198 | 52 | 1 | 18 | 214 | 1 | 198 | 2.10e-95 | 309 |
MS.gene032126.t1 | AT1G76320 | 56.132 | 424 | 177 | 5 | 214 | 629 | 274 | 696 | 3.99e-156 | 467 |
MS.gene032126.t1 | AT1G76320 | 73.232 | 198 | 52 | 1 | 18 | 214 | 1 | 198 | 2.10e-95 | 309 |
MS.gene032126.t1 | AT1G76320 | 56.265 | 423 | 176 | 5 | 214 | 629 | 274 | 694 | 7.33e-156 | 466 |
MS.gene032126.t1 | AT1G76320 | 73.232 | 198 | 52 | 1 | 18 | 214 | 1 | 198 | 2.42e-95 | 309 |
MS.gene032126.t1 | AT1G76320 | 57.214 | 402 | 157 | 3 | 214 | 611 | 274 | 664 | 7.60e-155 | 461 |
MS.gene032126.t1 | AT1G76320 | 73.232 | 198 | 52 | 1 | 18 | 214 | 1 | 198 | 4.56e-96 | 309 |
MS.gene032126.t1 | AT4G15090 | 45.995 | 387 | 193 | 2 | 178 | 548 | 286 | 672 | 2.72e-121 | 379 |
MS.gene032126.t1 | AT4G15090 | 47.257 | 237 | 105 | 5 | 13 | 234 | 50 | 281 | 7.06e-54 | 197 |
MS.gene032126.t1 | AT4G15090 | 45.995 | 387 | 193 | 2 | 178 | 548 | 286 | 672 | 2.72e-121 | 379 |
MS.gene032126.t1 | AT4G15090 | 47.257 | 237 | 105 | 5 | 13 | 234 | 50 | 281 | 7.06e-54 | 197 |
MS.gene032126.t1 | AT4G15090 | 45.995 | 387 | 193 | 2 | 178 | 548 | 286 | 672 | 2.72e-121 | 379 |
MS.gene032126.t1 | AT4G15090 | 47.257 | 237 | 105 | 5 | 13 | 234 | 50 | 281 | 7.06e-54 | 197 |
MS.gene032126.t1 | AT4G15090 | 45.995 | 387 | 193 | 2 | 178 | 548 | 286 | 672 | 2.72e-121 | 379 |
MS.gene032126.t1 | AT4G15090 | 47.257 | 237 | 105 | 5 | 13 | 234 | 50 | 281 | 7.06e-54 | 197 |
MS.gene032126.t1 | AT4G15090 | 45.995 | 387 | 193 | 2 | 178 | 548 | 286 | 672 | 2.72e-121 | 379 |
MS.gene032126.t1 | AT4G15090 | 47.257 | 237 | 105 | 5 | 13 | 234 | 50 | 281 | 7.06e-54 | 197 |
MS.gene032126.t1 | AT3G22170 | 48.649 | 333 | 169 | 2 | 214 | 545 | 346 | 677 | 7.57e-110 | 350 |
MS.gene032126.t1 | AT3G22170 | 44.954 | 218 | 88 | 3 | 13 | 214 | 69 | 270 | 7.15e-49 | 183 |
MS.gene032126.t1 | AT3G22170 | 48.649 | 333 | 169 | 2 | 214 | 545 | 346 | 677 | 7.57e-110 | 350 |
MS.gene032126.t1 | AT3G22170 | 44.954 | 218 | 88 | 3 | 13 | 214 | 69 | 270 | 7.15e-49 | 183 |
MS.gene032126.t1 | AT4G19990 | 47.788 | 339 | 173 | 3 | 214 | 548 | 228 | 566 | 1.76e-94 | 305 |
MS.gene032126.t1 | AT4G19990 | 42.135 | 178 | 56 | 5 | 54 | 214 | 4 | 151 | 2.40e-26 | 114 |
MS.gene032126.t1 | AT4G19990 | 47.788 | 339 | 173 | 3 | 214 | 548 | 285 | 623 | 3.29e-94 | 306 |
MS.gene032126.t1 | AT4G19990 | 45.070 | 213 | 70 | 5 | 19 | 214 | 26 | 208 | 4.43e-39 | 154 |
MS.gene032126.t1 | AT4G19990 | 47.788 | 339 | 173 | 3 | 214 | 548 | 285 | 623 | 3.29e-94 | 306 |
MS.gene032126.t1 | AT4G19990 | 45.070 | 213 | 70 | 5 | 19 | 214 | 26 | 208 | 4.43e-39 | 154 |
MS.gene032126.t1 | AT4G19990 | 47.788 | 339 | 173 | 3 | 214 | 548 | 285 | 623 | 3.81e-94 | 306 |
MS.gene032126.t1 | AT4G19990 | 45.070 | 213 | 70 | 5 | 19 | 214 | 26 | 208 | 4.37e-39 | 154 |
MS.gene032126.t1 | AT4G19990 | 47.788 | 339 | 173 | 3 | 214 | 548 | 285 | 623 | 5.40e-94 | 306 |
MS.gene032126.t1 | AT4G19990 | 45.070 | 213 | 70 | 5 | 19 | 214 | 26 | 208 | 8.91e-39 | 153 |
MS.gene032126.t1 | AT4G19990 | 47.788 | 339 | 173 | 3 | 214 | 548 | 285 | 623 | 5.40e-94 | 306 |
MS.gene032126.t1 | AT4G19990 | 45.070 | 213 | 70 | 5 | 19 | 214 | 26 | 208 | 8.91e-39 | 153 |
MS.gene032126.t1 | AT4G19990 | 47.788 | 339 | 173 | 3 | 214 | 548 | 299 | 637 | 7.07e-94 | 306 |
MS.gene032126.t1 | AT4G19990 | 45.070 | 213 | 70 | 5 | 19 | 214 | 40 | 222 | 4.86e-39 | 154 |
MS.gene032126.t1 | AT2G32250 | 41.742 | 333 | 193 | 1 | 214 | 545 | 240 | 572 | 2.03e-86 | 286 |
MS.gene032126.t1 | AT2G32250 | 42.523 | 214 | 90 | 3 | 18 | 231 | 1 | 181 | 1.33e-39 | 155 |
MS.gene032126.t1 | AT2G32250 | 41.742 | 333 | 193 | 1 | 214 | 545 | 240 | 572 | 2.16e-86 | 286 |
MS.gene032126.t1 | AT2G32250 | 42.523 | 214 | 90 | 3 | 18 | 231 | 1 | 181 | 1.49e-39 | 155 |
MS.gene032126.t1 | AT2G32250 | 41.742 | 333 | 193 | 1 | 214 | 545 | 281 | 613 | 2.53e-86 | 286 |
MS.gene032126.t1 | AT2G32250 | 40.789 | 228 | 102 | 3 | 4 | 231 | 28 | 222 | 4.56e-41 | 160 |
MS.gene032126.t1 | AT2G32250 | 41.742 | 333 | 193 | 1 | 214 | 545 | 281 | 613 | 3.01e-86 | 286 |
MS.gene032126.t1 | AT2G32250 | 40.789 | 228 | 102 | 3 | 4 | 231 | 28 | 222 | 5.78e-41 | 160 |
MS.gene032126.t1 | AT2G32250 | 41.742 | 333 | 193 | 1 | 214 | 545 | 281 | 613 | 3.01e-86 | 286 |
MS.gene032126.t1 | AT2G32250 | 40.789 | 228 | 102 | 3 | 4 | 231 | 28 | 222 | 5.78e-41 | 160 |
MS.gene032126.t1 | AT2G32250 | 41.742 | 333 | 193 | 1 | 214 | 545 | 281 | 613 | 3.69e-86 | 286 |
MS.gene032126.t1 | AT2G32250 | 40.789 | 228 | 102 | 3 | 4 | 231 | 28 | 222 | 6.21e-41 | 159 |
MS.gene032126.t1 | AT2G32250 | 41.742 | 333 | 193 | 1 | 214 | 545 | 281 | 613 | 3.69e-86 | 286 |
MS.gene032126.t1 | AT2G32250 | 40.789 | 228 | 102 | 3 | 4 | 231 | 28 | 222 | 6.21e-41 | 159 |
MS.gene032126.t1 | AT2G32250 | 41.742 | 333 | 193 | 1 | 214 | 545 | 281 | 613 | 3.69e-86 | 286 |
MS.gene032126.t1 | AT2G32250 | 40.789 | 228 | 102 | 3 | 4 | 231 | 28 | 222 | 6.21e-41 | 159 |
MS.gene032126.t1 | AT4G38180 | 36.937 | 333 | 203 | 3 | 215 | 540 | 362 | 694 | 6.21e-70 | 242 |
MS.gene032126.t1 | AT4G38180 | 38.813 | 219 | 110 | 7 | 13 | 213 | 72 | 284 | 3.36e-27 | 117 |
MS.gene032126.t1 | AT2G27110 | 35.294 | 340 | 214 | 4 | 215 | 550 | 164 | 501 | 9.84e-64 | 223 |
MS.gene032126.t1 | AT2G27110 | 35.294 | 340 | 214 | 4 | 215 | 550 | 309 | 646 | 3.63e-63 | 224 |
MS.gene032126.t1 | AT2G27110 | 30.942 | 223 | 121 | 9 | 1 | 214 | 34 | 232 | 1.86e-14 | 77.4 |
MS.gene032126.t1 | AT2G27110 | 35.294 | 340 | 214 | 4 | 215 | 550 | 309 | 646 | 3.63e-63 | 224 |
MS.gene032126.t1 | AT2G27110 | 30.942 | 223 | 121 | 9 | 1 | 214 | 34 | 232 | 1.86e-14 | 77.4 |
MS.gene032126.t1 | AT1G52520 | 31.563 | 339 | 216 | 6 | 214 | 538 | 358 | 694 | 6.52e-52 | 191 |
MS.gene032126.t1 | AT1G52520 | 31.579 | 209 | 123 | 6 | 14 | 213 | 85 | 282 | 5.75e-16 | 82.0 |
MS.gene032126.t1 | AT4G38170 | 29.688 | 384 | 258 | 5 | 215 | 588 | 127 | 508 | 9.83e-49 | 179 |
MS.gene032126.t1 | AT3G06250 | 36.101 | 277 | 159 | 5 | 215 | 484 | 438 | 703 | 5.80e-44 | 168 |
MS.gene032126.t1 | AT3G06250 | 25.616 | 203 | 120 | 4 | 13 | 214 | 189 | 361 | 2.30e-12 | 70.9 |
MS.gene032126.t1 | AT3G06250 | 36.101 | 277 | 159 | 5 | 215 | 484 | 438 | 703 | 5.80e-44 | 168 |
MS.gene032126.t1 | AT3G06250 | 25.616 | 203 | 120 | 4 | 13 | 214 | 189 | 361 | 2.30e-12 | 70.9 |
MS.gene032126.t1 | AT3G06250 | 36.101 | 277 | 159 | 5 | 215 | 484 | 438 | 703 | 5.80e-44 | 168 |
MS.gene032126.t1 | AT3G06250 | 25.616 | 203 | 120 | 4 | 13 | 214 | 189 | 361 | 2.30e-12 | 70.9 |
MS.gene032126.t1 | AT1G80010 | 30.792 | 341 | 215 | 8 | 214 | 541 | 383 | 715 | 3.00e-42 | 163 |
MS.gene032126.t1 | AT1G80010 | 29.091 | 220 | 130 | 4 | 14 | 214 | 95 | 307 | 1.08e-14 | 78.2 |
MS.gene032126.t1 | AT5G18960 | 33.456 | 272 | 173 | 4 | 215 | 484 | 462 | 727 | 4.70e-40 | 157 |
MS.gene032126.t1 | AT5G18960 | 27.619 | 210 | 120 | 5 | 8 | 214 | 205 | 385 | 3.59e-13 | 73.2 |
MS.gene032126.t1 | AT5G18960 | 33.456 | 272 | 173 | 4 | 215 | 484 | 462 | 727 | 4.70e-40 | 157 |
MS.gene032126.t1 | AT5G18960 | 27.619 | 210 | 120 | 5 | 8 | 214 | 205 | 385 | 3.59e-13 | 73.2 |
MS.gene032126.t1 | AT1G10240 | 26.706 | 337 | 213 | 7 | 194 | 507 | 305 | 630 | 9.10e-35 | 140 |
MS.gene032126.t1 | AT1G10240 | 26.706 | 337 | 213 | 7 | 194 | 507 | 305 | 630 | 9.10e-35 | 140 |
MS.gene032126.t1 | AT5G28530 | 24.808 | 520 | 323 | 13 | 9 | 480 | 50 | 549 | 4.78e-29 | 122 |
MS.gene032126.t1 | AT5G28530 | 24.618 | 524 | 323 | 13 | 9 | 480 | 50 | 553 | 5.29e-29 | 122 |
MS.gene032126.t1 | AT5G28530 | 25.868 | 317 | 208 | 6 | 181 | 480 | 306 | 612 | 7.52e-23 | 103 |
MS.gene032126.t1 | AT5G28530 | 25.868 | 317 | 208 | 6 | 181 | 480 | 306 | 612 | 7.52e-23 | 103 |
MS.gene032126.t1 | AT5G28530 | 25.545 | 321 | 208 | 6 | 181 | 480 | 306 | 616 | 7.58e-23 | 103 |
MS.gene032126.t1 | AT2G43280 | 31.544 | 149 | 96 | 2 | 13 | 155 | 21 | 169 | 3.97e-17 | 80.9 |
MS.gene032126.t1 | AT3G59470 | 39.806 | 103 | 56 | 3 | 19 | 117 | 75 | 175 | 1.78e-14 | 74.3 |
MS.gene032126.t1 | AT3G59470 | 39.806 | 103 | 56 | 3 | 19 | 117 | 75 | 175 | 1.78e-14 | 74.3 |
MS.gene032126.t1 | AT3G59470 | 39.806 | 103 | 56 | 3 | 19 | 117 | 87 | 187 | 1.80e-14 | 74.3 |
MS.gene032126.t1 | AT2G43280 | 30.827 | 133 | 86 | 2 | 29 | 155 | 2 | 134 | 3.45e-14 | 71.2 |
MS.gene032126.t1 | AT3G07500 | 37.288 | 118 | 71 | 1 | 8 | 122 | 27 | 144 | 3.87e-14 | 72.4 |
MS.gene032126.t1 | AT4G12850 | 35.294 | 102 | 66 | 0 | 11 | 112 | 8 | 109 | 3.41e-13 | 67.8 |
MS.gene032126.t1 | AT4G12850 | 35.294 | 102 | 66 | 0 | 11 | 112 | 8 | 109 | 3.96e-13 | 67.4 |
MS.gene032126.t1 | AT4G12850 | 35.294 | 102 | 66 | 0 | 11 | 112 | 8 | 109 | 1.52e-12 | 67.0 |
Find 109 sgRNAs with CRISPR-Local
Find 175 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCAAATTCCATTTCATTATT+AGG | 0.082825 | 2.1:-6076541 | None:intergenic |
TATGGATTCTTCTATTATTA+TGG | 0.187730 | 2.1:+6076501 | None:intergenic |
CTTCAACATTGCAACCAATA+TGG | 0.212680 | 2.1:-6078388 | None:intergenic |
ACCTTCTTCACCCAATATTA+TGG | 0.238949 | 2.1:-6078261 | None:intergenic |
AAAGTTTCAGTTCGAGGTTT+TGG | 0.254700 | 2.1:+6077914 | MS.gene032126:CDS |
CAAATTCCATTTCATTATTA+GGG | 0.256855 | 2.1:-6076540 | None:intergenic |
TGTCACTTGTTTGAATATAA+AGG | 0.267118 | 2.1:+6078065 | MS.gene032126:CDS |
TACATGGCATGATAGCTTTA+TGG | 0.278309 | 2.1:+6077494 | MS.gene032126:CDS |
CAGCTTTAATAGCATCATTT+TGG | 0.281024 | 2.1:-6077383 | None:intergenic |
GTTTATGAAGGATATTTCTT+TGG | 0.305630 | 2.1:+6077659 | MS.gene032126:CDS |
AAGCCATGTAGTAACTTTCT+TGG | 0.324064 | 2.1:-6078292 | None:intergenic |
ATGAATCGTCAACAAGATAA+AGG | 0.325098 | 2.1:+6076985 | MS.gene032126:CDS |
GATGGTGGAAGCTGGTTGAT+AGG | 0.330003 | 2.1:+6077571 | MS.gene032126:CDS |
AGTTAAGTAGTCGCCGATCT+AGG | 0.332224 | 2.1:+6076629 | MS.gene032126:CDS |
CTTAAGAACTCAAGCTGTTT+CGG | 0.341887 | 2.1:-6077471 | None:intergenic |
TCTTTGGCTGGCTTGTCTAC+TGG | 0.346615 | 2.1:+6077675 | MS.gene032126:CDS |
GGGGAAGGTGACTTTAATTC+AGG | 0.347918 | 2.1:-6077846 | None:intergenic |
CCAAGCATCAAAATTTGCTT+TGG | 0.356859 | 2.1:-6077814 | None:intergenic |
ACAAGATAAAGGGCGGAGTT+TGG | 0.376984 | 2.1:+6076996 | MS.gene032126:CDS |
TGTAGACGAGCCATAATATT+GGG | 0.380324 | 2.1:+6078251 | MS.gene032126:CDS |
GCAGCCTTAGCTACCCATAT+TGG | 0.380779 | 2.1:+6078374 | MS.gene032126:CDS |
ATCGGCTTAGAAATGTGTTC+TGG | 0.382613 | 2.1:+6077118 | MS.gene032126:CDS |
TTCAACATTGCAACCAATAT+GGG | 0.390404 | 2.1:-6078387 | None:intergenic |
GTATCAGAATATTGATTGTT+TGG | 0.395189 | 2.1:+6076954 | MS.gene032126:CDS |
TTCAAACAAGTGACAGGAAC+AGG | 0.401839 | 2.1:-6078057 | None:intergenic |
ATGTAGACGAGCCATAATAT+TGG | 0.410423 | 2.1:+6078250 | MS.gene032126:CDS |
AGCCATGTAGTAACTTTCTT+GGG | 0.412918 | 2.1:-6078291 | None:intergenic |
CCACGTCCTTCCCCGAAAAT+CGG | 0.415830 | 2.1:+6076730 | MS.gene032126:CDS |
TTAAACTTAGAGATGTTAAG+TGG | 0.419663 | 2.1:+6077595 | MS.gene032126:CDS |
TTGCTTTAGAGCCTCGCTTA+AGG | 0.423117 | 2.1:-6078321 | None:intergenic |
ATGAAGGATATTTCTTTGGC+TGG | 0.424174 | 2.1:+6077663 | MS.gene032126:CDS |
AGAGAAGACAGGATGGTAAA+TGG | 0.425700 | 2.1:+6076776 | MS.gene032126:CDS |
TCAAGACCCTAATAATGAAA+TGG | 0.426644 | 2.1:+6076534 | MS.gene032126:CDS |
CTATCAAAAGTTTCAGTTCG+AGG | 0.433567 | 2.1:+6077908 | MS.gene032126:CDS |
CTCTATCTTCAAGAATCAAT+TGG | 0.436835 | 2.1:-6077779 | None:intergenic |
TATGCAAAATCAGCAGGGTT+TGG | 0.440167 | 2.1:+6076598 | MS.gene032126:CDS |
AAAGAATATGCAAAATCAGC+AGG | 0.441479 | 2.1:+6076592 | MS.gene032126:CDS |
AGGAGGTGTTGAAGGAAGTA+AGG | 0.444639 | 2.1:+6078511 | MS.gene032126:CDS |
ATCATTTAATCTCCGGACCT+TGG | 0.446449 | 2.1:-6078225 | None:intergenic |
TTACTTCCTTCAACACCTCC+TGG | 0.448450 | 2.1:-6078509 | None:intergenic |
TAGCGATGGCTTTCAACAAA+TGG | 0.466048 | 2.1:+6078649 | MS.gene032126:CDS |
AGGAGTCCAGGAGGTGTTGA+AGG | 0.470185 | 2.1:+6078503 | MS.gene032126:CDS |
TGAATTGTTTATGCATATGC+AGG | 0.475105 | 2.1:+6077050 | MS.gene032126:CDS |
ATTGTTGTTCTACAAATGTC+TGG | 0.476184 | 2.1:+6078107 | MS.gene032126:CDS |
AGTAAGAAGGCTGCAAGGAC+TGG | 0.480356 | 2.1:+6078470 | MS.gene032126:CDS |
GTATCCTATTGGTGAAAACT+TGG | 0.480416 | 2.1:+6078190 | MS.gene032126:CDS |
GCCATATAGGTGCCTCAGCT+TGG | 0.482653 | 2.1:+6078611 | MS.gene032126:intron |
ATATGGTAATAAACAACAAT+CGG | 0.483815 | 2.1:+6076693 | MS.gene032126:CDS |
TACATAAATCATTTAATCTC+CGG | 0.485589 | 2.1:-6078232 | None:intergenic |
GCTGCAAGGACTGGTGTAGC+TGG | 0.488741 | 2.1:+6078479 | MS.gene032126:CDS |
TCTTGAAGATAGAGATGAAG+AGG | 0.488747 | 2.1:+6077788 | MS.gene032126:CDS |
TGAAAAGAGATGGTGGAAGC+TGG | 0.490757 | 2.1:+6077563 | MS.gene032126:CDS |
TATTATACCATCTAACGATA+AGG | 0.493893 | 2.1:+6078424 | MS.gene032126:CDS |
TTGGGTGCCAACGTTTATGA+AGG | 0.495738 | 2.1:+6077647 | MS.gene032126:CDS |
CGGAGGAAGAATTCGACTGC+AGG | 0.496134 | 2.1:+6076910 | MS.gene032126:CDS |
ATCAGAACTACATGGTAGAA+TGG | 0.499877 | 2.1:+6078012 | MS.gene032126:CDS |
TCGGAGACCTTATCGTTAGA+TGG | 0.500112 | 2.1:-6078431 | None:intergenic |
ACAAATGTATATATCAATCA+TGG | 0.501166 | 2.1:+6077526 | MS.gene032126:CDS |
GGTGTAGCTGGTAGGAGTCC+AGG | 0.504600 | 2.1:+6078491 | MS.gene032126:CDS |
TGAATCGTCAACAAGATAAA+GGG | 0.505965 | 2.1:+6076986 | MS.gene032126:CDS |
TCGGCTTAGAAATGTGTTCT+GGG | 0.507619 | 2.1:+6077119 | MS.gene032126:CDS |
GCTTTAAGTAGGTATCCTAT+TGG | 0.508050 | 2.1:+6078179 | MS.gene032126:CDS |
CAAAGTACATATTGAAAAGA+TGG | 0.509419 | 2.1:+6078147 | MS.gene032126:CDS |
GTATGATGATCGTGCATGTT+GGG | 0.511716 | 2.1:+6077629 | MS.gene032126:CDS |
GCCATAATATTGGGTGAAGA+AGG | 0.513780 | 2.1:+6078260 | MS.gene032126:CDS |
TTTATATTCAAACAAGTGAC+AGG | 0.515815 | 2.1:-6078063 | None:intergenic |
AGCAATTTGAAAAGAGATGG+TGG | 0.516518 | 2.1:+6077556 | MS.gene032126:CDS |
AGCTTGAGTTCTTAAGTACA+TGG | 0.520700 | 2.1:+6077478 | MS.gene032126:CDS |
ATCCCAAGAAAGTTACTACA+TGG | 0.521925 | 2.1:+6078289 | MS.gene032126:CDS |
ATTCTTTCGATGCCCTAGAT+CGG | 0.531419 | 2.1:-6076642 | None:intergenic |
AAGAGGTTCAATCCAAGGTC+CGG | 0.533736 | 2.1:+6078213 | MS.gene032126:CDS |
CAACAATTGCATGTCTACAT+AGG | 0.534107 | 2.1:-6078091 | None:intergenic |
TATTGGTGAAAACTTGGAAG+AGG | 0.534284 | 2.1:+6078196 | MS.gene032126:CDS |
GTTAAGTAGTCGCCGATCTA+GGG | 0.536955 | 2.1:+6076630 | MS.gene032126:CDS |
TTGATTTGAATGAAGAGCAT+CGG | 0.543981 | 2.1:+6077100 | MS.gene032126:CDS |
GAAATATCCTTCATAAACGT+TGG | 0.547589 | 2.1:-6077654 | None:intergenic |
GAAAATGAATATGAGTAAGA+AGG | 0.550824 | 2.1:+6078457 | MS.gene032126:CDS |
GGCTTTAAGTTCCTTAAGCG+AGG | 0.551032 | 2.1:+6078310 | MS.gene032126:CDS |
GTCTTAATGAAGTATCAACT+TGG | 0.551353 | 2.1:-6077740 | None:intergenic |
CGAAAATAATCAGAACTACA+TGG | 0.553895 | 2.1:+6078004 | MS.gene032126:CDS |
AGAAGCAATTGAGCATTCCC+CGG | 0.554547 | 2.1:-6077027 | None:intergenic |
CATCTAAAGAAAGAAAATGA+TGG | 0.556147 | 2.1:+6077951 | MS.gene032126:CDS |
GCAACCAATATGGGTAGCTA+AGG | 0.558177 | 2.1:-6078378 | None:intergenic |
CAAGGACTGGTGTAGCTGGT+AGG | 0.565226 | 2.1:+6078483 | MS.gene032126:CDS |
ATACGTTGAGTAATGATGTT+CGG | 0.569177 | 2.1:+6076881 | MS.gene032126:CDS |
AAGAATTCGACTGCAGGTGG+TGG | 0.578130 | 2.1:+6076916 | MS.gene032126:CDS |
TGTATGATGATCGTGCATGT+TGG | 0.580054 | 2.1:+6077628 | MS.gene032126:CDS |
AGGAGCAATTTGAAAAGAGA+TGG | 0.582141 | 2.1:+6077553 | MS.gene032126:CDS |
GGACAAACGTCGCTTTAAGT+AGG | 0.584827 | 2.1:+6078168 | MS.gene032126:CDS |
TAAACTTAGAGATGTTAAGT+GGG | 0.586727 | 2.1:+6077596 | MS.gene032126:CDS |
CTTGGAAGAGGTTCAATCCA+AGG | 0.589927 | 2.1:+6078208 | MS.gene032126:CDS |
TGTTGAAGGAAGTAAGGGAA+AGG | 0.609259 | 2.1:+6078517 | MS.gene032126:CDS |
GTAATGATGTTCGGATGAGA+CGG | 0.611128 | 2.1:+6076890 | MS.gene032126:CDS |
AAGAATATGCAAAATCAGCA+GGG | 0.611582 | 2.1:+6076593 | MS.gene032126:CDS |
TCAATCGCATAAAAGAACTT+CGG | 0.614970 | 2.1:-6077081 | None:intergenic |
TATGCATGTGAAGAGAAGAC+AGG | 0.617413 | 2.1:+6076765 | MS.gene032126:CDS |
AGGAAGAATTCGACTGCAGG+TGG | 0.619877 | 2.1:+6076913 | MS.gene032126:CDS |
CCGCTTACTGCTCCAAGCTG+AGG | 0.621278 | 2.1:-6078623 | None:intergenic |
GGAGGTGTTGAAGGAAGTAA+GGG | 0.627245 | 2.1:+6078512 | MS.gene032126:CDS |
GCAGTAAGCGGTAGTAGCGA+TGG | 0.628228 | 2.1:+6078635 | MS.gene032126:CDS |
AGAATGGAACACATCAAACT+CGG | 0.636732 | 2.1:+6078028 | MS.gene032126:CDS |
ATATGAGTAAGAAGGCTGCA+AGG | 0.649250 | 2.1:+6078465 | MS.gene032126:CDS |
ACATGCACGATCATCATACA+AGG | 0.650096 | 2.1:-6077625 | None:intergenic |
CATGTGAAGAGAAGACAGGA+TGG | 0.667982 | 2.1:+6076769 | MS.gene032126:CDS |
CCTCAGCTTGGAGCAGTAAG+CGG | 0.668712 | 2.1:+6078623 | MS.gene032126:CDS |
ATCGTCAACAAGATAAAGGG+CGG | 0.671459 | 2.1:+6076989 | MS.gene032126:CDS |
TATATATCAATCATGGACAG+AGG | 0.673001 | 2.1:+6077533 | MS.gene032126:CDS |
ATGATGTTCGGATGAGACGG+AGG | 0.681860 | 2.1:+6076893 | MS.gene032126:CDS |
GTAGCTGGTAGGAGTCCAGG+AGG | 0.701373 | 2.1:+6078494 | MS.gene032126:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACAAATGTATATATCAATCA+TGG | + | chr2.1:6077526-6077545 | MS.gene032126:CDS | 20.0% |
!! | ATATGGTAATAAACAACAAT+CGG | + | chr2.1:6076693-6076712 | MS.gene032126:CDS | 20.0% |
!! | CAAATTCCATTTCATTATTA+GGG | - | chr2.1:6076543-6076562 | None:intergenic | 20.0% |
!! | TACATAAATCATTTAATCTC+CGG | - | chr2.1:6078235-6078254 | None:intergenic | 20.0% |
!! | TCAAATTCCATTTCATTATT+AGG | - | chr2.1:6076544-6076563 | None:intergenic | 20.0% |
!!! | AAATTTTCGTGTATTAGATA+TGG | + | chr2.1:6076676-6076695 | MS.gene032126:CDS | 20.0% |
!!! | GTATGTTTATAGTTTTGTTA+AGG | + | chr2.1:6076798-6076817 | MS.gene032126:CDS | 20.0% |
!!! | TTCTTACTCATATTCATTTT+CGG | - | chr2.1:6078458-6078477 | None:intergenic | 20.0% |
! | CAAAGTACATATTGAAAAGA+TGG | + | chr2.1:6078147-6078166 | MS.gene032126:CDS | 25.0% |
! | CATCTAAAGAAAGAAAATGA+TGG | + | chr2.1:6077951-6077970 | MS.gene032126:CDS | 25.0% |
! | GAAAATGAATATGAGTAAGA+AGG | + | chr2.1:6078457-6078476 | MS.gene032126:CDS | 25.0% |
! | GTTTATGAAGGATATTTCTT+TGG | + | chr2.1:6077659-6077678 | MS.gene032126:CDS | 25.0% |
! | TAAACTTAGAGATGTTAAGT+GGG | + | chr2.1:6077596-6077615 | MS.gene032126:CDS | 25.0% |
! | TATTATACCATCTAACGATA+AGG | + | chr2.1:6078424-6078443 | MS.gene032126:CDS | 25.0% |
! | TTAAACTTAGAGATGTTAAG+TGG | + | chr2.1:6077595-6077614 | MS.gene032126:CDS | 25.0% |
! | TTTATATTCAAACAAGTGAC+AGG | - | chr2.1:6078066-6078085 | None:intergenic | 25.0% |
!! | CATCATTTTCTTTCTTTAGA+TGG | - | chr2.1:6077953-6077972 | None:intergenic | 25.0% |
!! | CATCTTTTCAATATGTACTT+TGG | - | chr2.1:6078149-6078168 | None:intergenic | 25.0% |
!! | GTATCAGAATATTGATTGTT+TGG | + | chr2.1:6076954-6076973 | MS.gene032126:CDS | 25.0% |
!! | TGTCACTTGTTTGAATATAA+AGG | + | chr2.1:6078065-6078084 | MS.gene032126:CDS | 25.0% |
AAAGAATATGCAAAATCAGC+AGG | + | chr2.1:6076592-6076611 | MS.gene032126:CDS | 30.0% | |
AAGAATATGCAAAATCAGCA+GGG | + | chr2.1:6076593-6076612 | MS.gene032126:CDS | 30.0% | |
ATACGTTGAGTAATGATGTT+CGG | + | chr2.1:6076881-6076900 | MS.gene032126:CDS | 30.0% | |
ATCTGACAGAATGTAATGAA+AGG | - | chr2.1:6078771-6078790 | None:intergenic | 30.0% | |
ATGAATCGTCAACAAGATAA+AGG | + | chr2.1:6076985-6077004 | MS.gene032126:CDS | 30.0% | |
ATGGCATTTAGACAAAACTA+AGG | - | chr2.1:6078740-6078759 | None:intergenic | 30.0% | |
CGAAAATAATCAGAACTACA+TGG | + | chr2.1:6078004-6078023 | MS.gene032126:CDS | 30.0% | |
CTCTATCTTCAAGAATCAAT+TGG | - | chr2.1:6077782-6077801 | None:intergenic | 30.0% | |
GAAATATCCTTCATAAACGT+TGG | - | chr2.1:6077657-6077676 | None:intergenic | 30.0% | |
TATATATCAATCATGGACAG+AGG | + | chr2.1:6077533-6077552 | MS.gene032126:CDS | 30.0% | |
TCAAGACCCTAATAATGAAA+TGG | + | chr2.1:6076534-6076553 | MS.gene032126:CDS | 30.0% | |
TCAATCGCATAAAAGAACTT+CGG | - | chr2.1:6077084-6077103 | None:intergenic | 30.0% | |
TCTGACAGAATGTAATGAAA+GGG | - | chr2.1:6078770-6078789 | None:intergenic | 30.0% | |
TCTTAAAATTGTCTCTGACT+TGG | + | chr2.1:6078578-6078597 | MS.gene032126:intron | 30.0% | |
TGAATCGTCAACAAGATAAA+GGG | + | chr2.1:6076986-6077005 | MS.gene032126:CDS | 30.0% | |
TGAATTGTTTATGCATATGC+AGG | + | chr2.1:6077050-6077069 | MS.gene032126:CDS | 30.0% | |
TGGCATTTAGACAAAACTAA+GGG | - | chr2.1:6078739-6078758 | None:intergenic | 30.0% | |
TTCAACATTGCAACCAATAT+GGG | - | chr2.1:6078390-6078409 | None:intergenic | 30.0% | |
! | ACTCATATTCATTTTCGGAT+CGG | - | chr2.1:6078453-6078472 | None:intergenic | 30.0% |
! | ATTGTTGTTCTACAAATGTC+TGG | + | chr2.1:6078107-6078126 | MS.gene032126:CDS | 30.0% |
! | CTTTTCAATATGTACTTTGG+CGG | - | chr2.1:6078146-6078165 | None:intergenic | 30.0% |
! | GTCTTAATGAAGTATCAACT+TGG | - | chr2.1:6077743-6077762 | None:intergenic | 30.0% |
! | TTGATTTGAATGAAGAGCAT+CGG | + | chr2.1:6077100-6077119 | MS.gene032126:CDS | 30.0% |
! | TTTTCAATATGTACTTTGGC+GGG | - | chr2.1:6078145-6078164 | None:intergenic | 30.0% |
!! | ACAATTTTAAGAGTACAAGG+AGG | - | chr2.1:6078570-6078589 | None:intergenic | 30.0% |
!! | AGACTGTATTTACTTTTGTG+TGG | + | chr2.1:6077301-6077320 | MS.gene032126:intron | 30.0% |
!! | CAGCTTTAATAGCATCATTT+TGG | - | chr2.1:6077386-6077405 | None:intergenic | 30.0% |
!! | GAGACAATTTTAAGAGTACA+AGG | - | chr2.1:6078573-6078592 | None:intergenic | 30.0% |
!! | TTTTTGTTTGTGGCATGTTT+TGG | + | chr2.1:6077440-6077459 | MS.gene032126:CDS | 30.0% |
AAGCAAGTATAAGATACCGT+TGG | + | chr2.1:6077212-6077231 | MS.gene032126:intron | 35.0% | |
AAGCCATGTAGTAACTTTCT+TGG | - | chr2.1:6078295-6078314 | None:intergenic | 35.0% | |
ACAAAAACAATGACGTGTTC+CGG | - | chr2.1:6077427-6077446 | None:intergenic | 35.0% | |
ACCTTCTTCACCCAATATTA+TGG | - | chr2.1:6078264-6078283 | None:intergenic | 35.0% | |
AGAATGGAACACATCAAACT+CGG | + | chr2.1:6078028-6078047 | MS.gene032126:CDS | 35.0% | |
AGCAATTTGAAAAGAGATGG+TGG | + | chr2.1:6077556-6077575 | MS.gene032126:CDS | 35.0% | |
AGCCATGTAGTAACTTTCTT+GGG | - | chr2.1:6078294-6078313 | None:intergenic | 35.0% | |
AGCTTGAGTTCTTAAGTACA+TGG | + | chr2.1:6077478-6077497 | MS.gene032126:CDS | 35.0% | |
AGGAGCAATTTGAAAAGAGA+TGG | + | chr2.1:6077553-6077572 | MS.gene032126:CDS | 35.0% | |
ATCAGAACTACATGGTAGAA+TGG | + | chr2.1:6078012-6078031 | MS.gene032126:CDS | 35.0% | |
ATCCCAAGAAAGTTACTACA+TGG | + | chr2.1:6078289-6078308 | MS.gene032126:CDS | 35.0% | |
ATGAAGGATATTTCTTTGGC+TGG | + | chr2.1:6077663-6077682 | MS.gene032126:CDS | 35.0% | |
ATGTAGACGAGCCATAATAT+TGG | + | chr2.1:6078250-6078269 | MS.gene032126:CDS | 35.0% | |
CAACAATTGCATGTCTACAT+AGG | - | chr2.1:6078094-6078113 | None:intergenic | 35.0% | |
CTATCAAAAGTTTCAGTTCG+AGG | + | chr2.1:6077908-6077927 | MS.gene032126:CDS | 35.0% | |
CTGACAGAATGTAATGAAAG+GGG | - | chr2.1:6078769-6078788 | None:intergenic | 35.0% | |
CTTAAGAACTCAAGCTGTTT+CGG | - | chr2.1:6077474-6077493 | None:intergenic | 35.0% | |
CTTCAACATTGCAACCAATA+TGG | - | chr2.1:6078391-6078410 | None:intergenic | 35.0% | |
GAACGCAATAGAAAAAGTCA+GGG | - | chr2.1:6078684-6078703 | None:intergenic | 35.0% | |
GGCATTTAGACAAAACTAAG+GGG | - | chr2.1:6078738-6078757 | None:intergenic | 35.0% | |
GTATCCTATTGGTGAAAACT+TGG | + | chr2.1:6078190-6078209 | MS.gene032126:CDS | 35.0% | |
TATTGGTGAAAACTTGGAAG+AGG | + | chr2.1:6078196-6078215 | MS.gene032126:CDS | 35.0% | |
TCTTGAAGATAGAGATGAAG+AGG | + | chr2.1:6077788-6077807 | MS.gene032126:CDS | 35.0% | |
TGAACGCAATAGAAAAAGTC+AGG | - | chr2.1:6078685-6078704 | None:intergenic | 35.0% | |
TGGCATTCTTTATGCCATAT+AGG | + | chr2.1:6078598-6078617 | MS.gene032126:intron | 35.0% | |
TGTAGACGAGCCATAATATT+GGG | + | chr2.1:6078251-6078270 | MS.gene032126:CDS | 35.0% | |
! | AAACATGGTTTGTAGCAATG+GGG | + | chr2.1:6077331-6077350 | MS.gene032126:intron | 35.0% |
! | AAAGTTTCAGTTCGAGGTTT+TGG | + | chr2.1:6077914-6077933 | MS.gene032126:CDS | 35.0% |
! | AAGTTTCAGTTCGAGGTTTT+GGG | + | chr2.1:6077915-6077934 | MS.gene032126:CDS | 35.0% |
! | CAAACATGGTTTGTAGCAAT+GGG | + | chr2.1:6077330-6077349 | MS.gene032126:intron | 35.0% |
! | CCAAGCATCAAAATTTGCTT+TGG | - | chr2.1:6077817-6077836 | None:intergenic | 35.0% |
! | GCTTTAAGTAGGTATCCTAT+TGG | + | chr2.1:6078179-6078198 | MS.gene032126:CDS | 35.0% |
! | TACATGGCATGATAGCTTTA+TGG | + | chr2.1:6077494-6077513 | MS.gene032126:CDS | 35.0% |
! | TCTTCCAAGTTTTCACCAAT+AGG | - | chr2.1:6078197-6078216 | None:intergenic | 35.0% |
!! | CCAAAGCAAATTTTGATGCT+TGG | + | chr2.1:6077814-6077833 | MS.gene032126:CDS | 35.0% |
!! | CTTGCTTTACAACCGATTTT+CGG | - | chr2.1:6076745-6076764 | None:intergenic | 35.0% |
!! | TGTTCTGGGTTGATTCTAAA+GGG | + | chr2.1:6077133-6077152 | MS.gene032126:intron | 35.0% |
!! | TTGCTTTACAACCGATTTTC+GGG | - | chr2.1:6076744-6076763 | None:intergenic | 35.0% |
!!! | AACAGCAGTTGTTTTTCGAA+AGG | - | chr2.1:6077870-6077889 | None:intergenic | 35.0% |
!!! | ACAGCAGTTGTTTTTCGAAA+GGG | - | chr2.1:6077869-6077888 | None:intergenic | 35.0% |
!!! | CACGTCATTGTTTTTGTTTG+TGG | + | chr2.1:6077430-6077449 | MS.gene032126:CDS | 35.0% |
!!! | CTCATTTTTTTCGGAGTCAT+AGG | + | chr2.1:6076851-6076870 | MS.gene032126:CDS | 35.0% |
!!! | CTGCTCAAGCTCATTTTTTT+CGG | + | chr2.1:6076842-6076861 | MS.gene032126:CDS | 35.0% |
AATGCACATCCAAGCAATGT+TGG | - | chr2.1:6077270-6077289 | None:intergenic | 40.0% | |
ACAGAATGTAATGAAAGGGG+AGG | - | chr2.1:6078766-6078785 | None:intergenic | 40.0% | |
ACATGCACGATCATCATACA+AGG | - | chr2.1:6077628-6077647 | None:intergenic | 40.0% | |
AGAGAAGACAGGATGGTAAA+TGG | + | chr2.1:6076776-6076795 | MS.gene032126:CDS | 40.0% | |
ATATGAGTAAGAAGGCTGCA+AGG | + | chr2.1:6078465-6078484 | MS.gene032126:CDS | 40.0% | |
ATCATTTAATCTCCGGACCT+TGG | - | chr2.1:6078228-6078247 | None:intergenic | 40.0% | |
ATCGTCAACAAGATAAAGGG+CGG | + | chr2.1:6076989-6077008 | MS.gene032126:CDS | 40.0% | |
ATTCTTTCGATGCCCTAGAT+CGG | - | chr2.1:6076645-6076664 | None:intergenic | 40.0% | |
CAAAAACAATGACGTGTTCC+GGG | - | chr2.1:6077426-6077445 | None:intergenic | 40.0% | |
CATGTTCAACCAACATTGCT+TGG | + | chr2.1:6077258-6077277 | MS.gene032126:intron | 40.0% | |
CGAAAAAAATGAGCTTGAGC+AGG | - | chr2.1:6076844-6076863 | None:intergenic | 40.0% | |
GCCATAATATTGGGTGAAGA+AGG | + | chr2.1:6078260-6078279 | MS.gene032126:CDS | 40.0% | |
GTAATGAAAGGGGAGGTTAA+TGG | - | chr2.1:6078759-6078778 | None:intergenic | 40.0% | |
GTAATGATGTTCGGATGAGA+CGG | + | chr2.1:6076890-6076909 | MS.gene032126:CDS | 40.0% | |
GTATGATGATCGTGCATGTT+GGG | + | chr2.1:6077629-6077648 | MS.gene032126:CDS | 40.0% | |
TAGCGATGGCTTTCAACAAA+TGG | + | chr2.1:6078649-6078668 | MS.gene032126:CDS | 40.0% | |
TATGCAAAATCAGCAGGGTT+TGG | + | chr2.1:6076598-6076617 | MS.gene032126:CDS | 40.0% | |
TATGCATGTGAAGAGAAGAC+AGG | + | chr2.1:6076765-6076784 | MS.gene032126:CDS | 40.0% | |
TCGGCTTAGAAATGTGTTCT+GGG | + | chr2.1:6077119-6077138 | MS.gene032126:CDS | 40.0% | |
TGTATGATGATCGTGCATGT+TGG | + | chr2.1:6077628-6077647 | MS.gene032126:CDS | 40.0% | |
TGTTGAAGGAAGTAAGGGAA+AGG | + | chr2.1:6078517-6078536 | MS.gene032126:CDS | 40.0% | |
TTCAAACAAGTGACAGGAAC+AGG | - | chr2.1:6078060-6078079 | None:intergenic | 40.0% | |
TTGTGTGGTTACTGCAAACA+TGG | + | chr2.1:6077316-6077335 | MS.gene032126:intron | 40.0% | |
! | AACATGGTTTGTAGCAATGG+GGG | + | chr2.1:6077332-6077351 | MS.gene032126:intron | 40.0% |
! | ATCGGCTTAGAAATGTGTTC+TGG | + | chr2.1:6077118-6077137 | MS.gene032126:CDS | 40.0% |
! | GCAAACATGGTTTGTAGCAA+TGG | + | chr2.1:6077329-6077348 | MS.gene032126:intron | 40.0% |
! | GCAATGTTGGTTGAACATGA+TGG | - | chr2.1:6077257-6077276 | None:intergenic | 40.0% |
! | TCTAAAGGGTTGGAGGATTT+TGG | + | chr2.1:6077147-6077166 | MS.gene032126:intron | 40.0% |
!! | ACTCCAACAAAAAGCACCAA+CGG | - | chr2.1:6077231-6077250 | None:intergenic | 40.0% |
!! | ATACCGTTGGTGCTTTTTGT+TGG | + | chr2.1:6077225-6077244 | MS.gene032126:intron | 40.0% |
!! | GTGTTCTGGGTTGATTCTAA+AGG | + | chr2.1:6077132-6077151 | MS.gene032126:intron | 40.0% |
!! | TGCTTTACAACCGATTTTCG+GGG | - | chr2.1:6076743-6076762 | None:intergenic | 40.0% |
!!! | AGTTGTTTTTCGAAAGGGGA+AGG | - | chr2.1:6077864-6077883 | None:intergenic | 40.0% |
!!! | CAGCAGTTGTTTTTCGAAAG+GGG | - | chr2.1:6077868-6077887 | None:intergenic | 40.0% |
AAGAGGTTCAATCCAAGGTC+CGG | + | chr2.1:6078213-6078232 | MS.gene032126:CDS | 45.0% | |
ACAAGATAAAGGGCGGAGTT+TGG | + | chr2.1:6076996-6077015 | MS.gene032126:CDS | 45.0% | |
AGAAGCAATTGAGCATTCCC+CGG | - | chr2.1:6077030-6077049 | None:intergenic | 45.0% | |
AGTTAAGTAGTCGCCGATCT+AGG | + | chr2.1:6076629-6076648 | MS.gene032126:CDS | 45.0% | |
CATGTGAAGAGAAGACAGGA+TGG | + | chr2.1:6076769-6076788 | MS.gene032126:CDS | 45.0% | |
CTTGGAAGAGGTTCAATCCA+AGG | + | chr2.1:6078208-6078227 | MS.gene032126:CDS | 45.0% | |
GAAGGAAGTAAGGGAAAGGT+TGG | + | chr2.1:6078521-6078540 | MS.gene032126:intron | 45.0% | |
GCAACCAATATGGGTAGCTA+AGG | - | chr2.1:6078381-6078400 | None:intergenic | 45.0% | |
GGGGAAGGTGACTTTAATTC+AGG | - | chr2.1:6077849-6077868 | None:intergenic | 45.0% | |
GTTAAGTAGTCGCCGATCTA+GGG | + | chr2.1:6076630-6076649 | MS.gene032126:CDS | 45.0% | |
TCGGAGACCTTATCGTTAGA+TGG | - | chr2.1:6078434-6078453 | None:intergenic | 45.0% | |
TGGTCAGTTAGAATCACCTG+CGG | - | chr2.1:6077366-6077385 | None:intergenic | 45.0% | |
TTACTTCCTTCAACACCTCC+TGG | - | chr2.1:6078512-6078531 | None:intergenic | 45.0% | |
TTGGGTGCCAACGTTTATGA+AGG | + | chr2.1:6077647-6077666 | MS.gene032126:CDS | 45.0% | |
! | GGACAAACGTCGCTTTAAGT+AGG | + | chr2.1:6078168-6078187 | MS.gene032126:CDS | 45.0% |
! | GGTTGATTCTAAAGGGTTGG+AGG | + | chr2.1:6077140-6077159 | MS.gene032126:intron | 45.0% |
!! | AGGAGGTGTTGAAGGAAGTA+AGG | + | chr2.1:6078511-6078530 | MS.gene032126:CDS | 45.0% |
!! | CTGGGTTGATTCTAAAGGGT+TGG | + | chr2.1:6077137-6077156 | MS.gene032126:intron | 45.0% |
!! | GGAGGTGTTGAAGGAAGTAA+GGG | + | chr2.1:6078512-6078531 | MS.gene032126:CDS | 45.0% |
!! | GGCTTTAAGTTCCTTAAGCG+AGG | + | chr2.1:6078310-6078329 | MS.gene032126:CDS | 45.0% |
!! | TGAAAAGAGATGGTGGAAGC+TGG | + | chr2.1:6077563-6077582 | MS.gene032126:CDS | 45.0% |
!! | TTACAACCGATTTTCGGGGA+AGG | - | chr2.1:6076739-6076758 | None:intergenic | 45.0% |
!! | TTGCTTTAGAGCCTCGCTTA+AGG | - | chr2.1:6078324-6078343 | None:intergenic | 45.0% |
!!! | CGGAGTTTGGTTTTAGAACC+GGG | + | chr2.1:6077009-6077028 | MS.gene032126:CDS | 45.0% |
!!! | GCGGAGTTTGGTTTTAGAAC+CGG | + | chr2.1:6077008-6077027 | MS.gene032126:CDS | 45.0% |
!!! | GGAGTTTGGTTTTAGAACCG+GGG | + | chr2.1:6077010-6077029 | MS.gene032126:CDS | 45.0% |
AAGAATTCGACTGCAGGTGG+TGG | + | chr2.1:6076916-6076935 | MS.gene032126:CDS | 50.0% | |
AGGAAGAATTCGACTGCAGG+TGG | + | chr2.1:6076913-6076932 | MS.gene032126:CDS | 50.0% | |
AGTAAGAAGGCTGCAAGGAC+TGG | + | chr2.1:6078470-6078489 | MS.gene032126:CDS | 50.0% | |
ATGATGTTCGGATGAGACGG+AGG | + | chr2.1:6076893-6076912 | MS.gene032126:CDS | 50.0% | |
GCAGCCTTAGCTACCCATAT+TGG | + | chr2.1:6078374-6078393 | MS.gene032126:CDS | 50.0% | |
! | TCCAAGCTGAGGCACCTATA+TGG | - | chr2.1:6078615-6078634 | None:intergenic | 50.0% |
!! | GATGGTGGAAGCTGGTTGAT+AGG | + | chr2.1:6077571-6077590 | MS.gene032126:CDS | 50.0% |
!! | TCTTTGGCTGGCTTGTCTAC+TGG | + | chr2.1:6077675-6077694 | MS.gene032126:CDS | 50.0% |
CCACGTCCTTCCCCGAAAAT+CGG | + | chr2.1:6076730-6076749 | MS.gene032126:CDS | 55.0% | |
CCTCAGCTTGGAGCAGTAAG+CGG | + | chr2.1:6078623-6078642 | MS.gene032126:CDS | 55.0% | |
CGGAGGAAGAATTCGACTGC+AGG | + | chr2.1:6076910-6076929 | MS.gene032126:CDS | 55.0% | |
GCAGTAAGCGGTAGTAGCGA+TGG | + | chr2.1:6078635-6078654 | MS.gene032126:CDS | 55.0% | |
GCCATATAGGTGCCTCAGCT+TGG | + | chr2.1:6078611-6078630 | MS.gene032126:intron | 55.0% | |
! | CAAGGACTGGTGTAGCTGGT+AGG | + | chr2.1:6078483-6078502 | MS.gene032126:CDS | 55.0% |
!! | AGGAGTCCAGGAGGTGTTGA+AGG | + | chr2.1:6078503-6078522 | MS.gene032126:CDS | 55.0% |
!! | CGATTTTCGGGGAAGGACGT+GGG | - | chr2.1:6076732-6076751 | None:intergenic | 55.0% |
!!! | GCTGTCGCTGCTGTTTTTCC+CGG | + | chr2.1:6077405-6077424 | MS.gene032126:CDS | 55.0% |
CCGCTTACTGCTCCAAGCTG+AGG | - | chr2.1:6078626-6078645 | None:intergenic | 60.0% | |
GGTGTAGCTGGTAGGAGTCC+AGG | + | chr2.1:6078491-6078510 | MS.gene032126:CDS | 60.0% | |
GTAGCTGGTAGGAGTCCAGG+AGG | + | chr2.1:6078494-6078513 | MS.gene032126:CDS | 60.0% | |
! | GCTGCAAGGACTGGTGTAGC+TGG | + | chr2.1:6078479-6078498 | MS.gene032126:CDS | 60.0% |
!! | CCGATTTTCGGGGAAGGACG+TGG | - | chr2.1:6076733-6076752 | None:intergenic | 60.0% |
AATGGGGGAACGTGCTCCGC+AGG | + | chr2.1:6077347-6077366 | MS.gene032126:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 6076502 | 6078818 | 6076502 | ID=MS.gene032126 |
chr2.1 | mRNA | 6076502 | 6078818 | 6076502 | ID=MS.gene032126.t1;Parent=MS.gene032126 |
chr2.1 | exon | 6076502 | 6077140 | 6076502 | ID=MS.gene032126.t1.exon1;Parent=MS.gene032126.t1 |
chr2.1 | CDS | 6076502 | 6077140 | 6076502 | ID=cds.MS.gene032126.t1;Parent=MS.gene032126.t1 |
chr2.1 | exon | 6077369 | 6078538 | 6077369 | ID=MS.gene032126.t1.exon2;Parent=MS.gene032126.t1 |
chr2.1 | CDS | 6077369 | 6078538 | 6077369 | ID=cds.MS.gene032126.t1;Parent=MS.gene032126.t1 |
chr2.1 | exon | 6078620 | 6078670 | 6078620 | ID=MS.gene032126.t1.exon3;Parent=MS.gene032126.t1 |
chr2.1 | CDS | 6078620 | 6078670 | 6078620 | ID=cds.MS.gene032126.t1;Parent=MS.gene032126.t1 |
chr2.1 | exon | 6078789 | 6078818 | 6078789 | ID=MS.gene032126.t1.exon4;Parent=MS.gene032126.t1 |
chr2.1 | CDS | 6078789 | 6078818 | 6078789 | ID=cds.MS.gene032126.t1;Parent=MS.gene032126.t1 |
Gene Sequence |
Protein sequence |