AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene032134

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032134.t1 MTR_2g098470 93.142 627 31 2 1 623 1 619 0.0 1171
MS.gene032134.t1 MTR_5g087790 63.312 308 102 4 24 329 35 333 2.92e-132 401
MS.gene032134.t1 MTR_3g078770 63.946 294 92 4 39 330 53 334 3.31e-125 383
MS.gene032134.t1 MTR_3g087530 58.238 261 94 5 35 288 29 281 1.93e-98 307
MS.gene032134.t1 MTR_6g460640 53.731 268 111 4 27 290 32 290 1.25e-94 305
MS.gene032134.t1 MTR_8g091370 56.716 268 94 6 32 288 16 272 7.59e-94 296
MS.gene032134.t1 MTR_6g060600 53.358 268 112 4 27 290 32 290 6.32e-93 300
MS.gene032134.t1 MTR_3g010790 55.882 204 78 3 94 290 1 199 2.74e-75 249
MS.gene032134.t1 MTR_2g098450 66.013 153 43 3 475 623 65 212 1.01e-62 206
MS.gene032134.t1 MTR_2g098450 79.032 62 13 0 16 77 3 64 1.37e-23 99.8
MS.gene032134.t1 MTR_1g024420 41.121 107 63 0 30 136 2 108 1.38e-24 99.4
MS.gene032134.t1 MTR_7g095580 55.385 65 29 0 83 147 1 65 6.95e-19 82.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032134.t1 AT1G73730 51.675 627 239 16 1 623 1 567 0.0 531
MS.gene032134.t1 AT1G73730 52.131 610 228 16 18 623 6 555 0.0 524
MS.gene032134.t1 AT3G20770 69.145 269 79 3 24 290 35 301 9.76e-129 392
MS.gene032134.t1 AT2G27050 67.778 270 81 4 25 290 36 303 3.32e-128 390
MS.gene032134.t1 AT5G10120 55.849 265 110 3 29 288 14 276 4.90e-96 303
MS.gene032134.t1 AT5G65100 52.190 274 112 4 33 288 33 305 1.03e-89 289
MS.gene032134.t1 AT5G21120 52.797 286 124 5 31 306 41 325 1.60e-89 287
MS.gene032134.t1 AT5G21120 52.797 286 124 5 31 306 41 325 1.60e-89 287
MS.gene032134.t1 AT5G21120 52.797 286 124 5 31 306 48 332 1.65e-89 287

Find 174 sgRNAs with CRISPR-Local

Find 235 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCATTCTCTGGTTGCCTAAT+TGG 0.150692 2.1:-5888287 None:intergenic
GGATCACCATTATTAGATTT+TGG 0.201596 2.1:+5888413 MS.gene032134:CDS
ATGGGTGAACTCGTTGAAAT+TGG 0.238500 2.1:+5885743 MS.gene032134:CDS
ATATTCGGCAGTTTACTTCT+AGG 0.240085 2.1:-5887843 None:intergenic
GGCCCCTCATGTCTTATTTC+CGG 0.240962 2.1:-5887951 None:intergenic
AAGTCATGTGGTTTCTTATA+AGG 0.251269 2.1:-5887327 None:intergenic
TTTAGATGATATCATGGGTT+TGG 0.262439 2.1:+5888469 MS.gene032134:CDS
GCAGGTCTTGGAGCGTGCTC+TGG 0.271067 2.1:-5887146 None:intergenic
AACCCATGATATCATCTAAA+AGG 0.274602 2.1:-5888466 None:intergenic
GTTGAAATTGGAGCTGATAT+TGG 0.286718 2.1:+5885755 MS.gene032134:CDS
AGACAGGAGCAATCAGTTTA+TGG 0.290050 2.1:+5887671 MS.gene032134:CDS
TCAGCTTCATGAGGCATAAC+AGG 0.297998 2.1:-5888173 None:intergenic
AGAGATTGAGGCAGAAGATT+TGG 0.298365 2.1:+5886753 MS.gene032134:CDS
CGGCAAAGGAAAGTTCAATT+TGG 0.299516 2.1:+5887463 MS.gene032134:CDS
CATGAGCCAGTTCATTTATC+AGG 0.301004 2.1:+5888017 MS.gene032134:CDS
CCAAACCTATCCAGCTCGTT+TGG 0.316285 2.1:-5888392 None:intergenic
TGTTGGTTCTGTTTCTTCTA+AGG 0.322080 2.1:+5887647 MS.gene032134:CDS
CCTGTTCATTCCCATGAATC+TGG 0.335499 2.1:-5887899 None:intergenic
ACCCGAGCGTTGCATCTTGC+AGG 0.344551 2.1:-5887164 None:intergenic
TCGTCTCTCTCATTCATATT+CGG 0.345135 2.1:-5887858 None:intergenic
GAACGTGGTCGTTTCTTCCT+AGG 0.356496 2.1:-5887759 None:intergenic
TTAGATGATATCATGGGTTT+GGG 0.360802 2.1:+5888470 MS.gene032134:CDS
TCTTAGCTCGATCGGAATCT+TGG 0.364311 2.1:-5887731 None:intergenic
TTGAAATTGGAGCTGATATT+GGG 0.378190 2.1:+5885756 MS.gene032134:CDS
AAAACTCCAAAATCTAATAA+TGG 0.379865 2.1:-5888419 None:intergenic
CCGGGTGCTGTTACATGAAC+TGG 0.385720 2.1:-5888050 None:intergenic
GCGTTGCATCTTGCAGGTCT+TGG 0.388206 2.1:-5887158 None:intergenic
TTGATGTTGCCCATCCTGAC+TGG 0.393798 2.1:-5888231 None:intergenic
GAGGAAATATCCATTGGAAA+AGG 0.394290 2.1:+5887227 MS.gene032134:CDS
TTATCAGAGGAACCACTAAC+TGG 0.402423 2.1:-5887003 None:intergenic
CTCCGCCTTGGTGGCCCACC+GGG 0.404229 2.1:+5887256 MS.gene032134:CDS
TGCTCTGGGAGTTCCCATTT+CGG 0.409722 2.1:-5887131 None:intergenic
AAGAAAAGGTGAAGTTTGAT+AGG 0.411593 2.1:+5887043 MS.gene032134:CDS
GAGGGGCCAAGTCATCTATC+TGG 0.415007 2.1:+5887966 MS.gene032134:CDS
CCTCCGCCTTGGTGGCCCAC+CGG 0.415149 2.1:+5887255 MS.gene032134:CDS
ATAGTTATTGCAGCATTCTC+TGG 0.415425 2.1:-5888299 None:intergenic
AAGGAAAGTTCAATTTGGTT+GGG 0.416475 2.1:+5887468 MS.gene032134:CDS
TCACTGTTCGCGGCGGGACC+AGG 0.419875 2.1:-5888263 None:intergenic
CCAAACGAGCTGGATAGGTT+TGG 0.422592 2.1:+5888392 MS.gene032134:CDS
GAGGCCGAAAATAACCGAAA+TGG 0.427774 2.1:+5887117 MS.gene032134:CDS
ATGAATGGTGATGAAATTAT+CGG 0.435300 2.1:+5888335 MS.gene032134:CDS
CCGCGAACAGTGAACCAATT+AGG 0.435891 2.1:+5888273 MS.gene032134:CDS
CCTAATTGGTTCACTGTTCG+CGG 0.440195 2.1:-5888273 None:intergenic
TCATACTTGGCTATGGCTGC+AGG 0.444642 2.1:-5887072 None:intergenic
CGACCACCAATCTTCATTCC+CGG 0.445023 2.1:-5887274 None:intergenic
CTGTTTCTTCTAAGGAAGAC+AGG 0.448155 2.1:+5887655 MS.gene032134:CDS
TACAATCCAGTCACAAGATA+TGG 0.449117 2.1:+5888206 MS.gene032134:CDS
GTAGCTGCACTCCAGATTCA+TGG 0.449306 2.1:+5887888 MS.gene032134:CDS
CAGGTCTTGGAGCGTGCTCT+GGG 0.450202 2.1:-5887145 None:intergenic
TATTAGATATCACAATATTC+CGG 0.450502 2.1:+5886711 MS.gene032134:CDS
CAAACCTATCCAGCTCGTTT+GGG 0.454172 2.1:-5888391 None:intergenic
AAAGGAAAGTTCAATTTGGT+TGG 0.458921 2.1:+5887467 MS.gene032134:CDS
AAGATTTGGAGAGGCGGATG+TGG 0.460361 2.1:+5886767 MS.gene032134:CDS
CACATCTTCTTCAAGTCATG+TGG 0.464103 2.1:-5887339 None:intergenic
GGCCCACCGGGAATGAAGAT+TGG 0.471569 2.1:+5887268 MS.gene032134:CDS
TCGCGAGTTATCTGATGGTT+CGG 0.474239 2.1:-5887697 None:intergenic
AGTAGCGATAACGGTACGTC+TGG 0.478350 2.1:+5887528 MS.gene032134:CDS
AAGACACTCTGCTTCATACT+TGG 0.479673 2.1:-5887085 None:intergenic
AGGCCGAAAATAACCGAAAT+GGG 0.482158 2.1:+5887118 MS.gene032134:CDS
TCACCATTCATATTTGCTGC+AGG 0.483300 2.1:-5888323 None:intergenic
CCAGATTCATGGGAATGAAC+AGG 0.489559 2.1:+5887899 MS.gene032134:CDS
AGGGTGTTCCTCCGCCTTGG+TGG 0.489757 2.1:+5887247 MS.gene032134:CDS
CCAGTTCATGTAACAGCACC+CGG 0.490378 2.1:+5888050 MS.gene032134:CDS
AAAAGGGTGTTCCTCCGCCT+TGG 0.490659 2.1:+5887244 MS.gene032134:CDS
CCGTGTCCTGATAAATGAAC+TGG 0.492744 2.1:-5888023 None:intergenic
AGGAAATATCCATTGGAAAA+GGG 0.497233 2.1:+5887228 MS.gene032134:CDS
CACAAGATATGGTCCCAGTC+AGG 0.497696 2.1:+5888217 MS.gene032134:CDS
ATTGGTTCACTGTTCGCGGC+GGG 0.497840 2.1:-5888269 None:intergenic
CATTCCCAAACGAGCTGGAT+AGG 0.500944 2.1:+5888387 MS.gene032134:CDS
TAAGTACATGCTGAAGCTCA+TGG 0.501457 2.1:+5886927 MS.gene032134:CDS
TCATCACTGACATCTTTCTC+CGG 0.504020 2.1:-5886730 None:intergenic
AAGAACACCAGTTGGCATAT+CGG 0.504528 2.1:-5887556 None:intergenic
ATTTCATTGTCAGATTGTGC+TGG 0.504859 2.1:-5887807 None:intergenic
GGAATTACCGATATGCCAAC+TGG 0.505544 2.1:+5887549 MS.gene032134:CDS
TCATGTCCTGGTAAATGAAC+TGG 0.506010 2.1:-5887999 None:intergenic
ACCTGCAAGATGCAACGCTC+GGG 0.506370 2.1:+5887163 MS.gene032134:CDS
AGGAAAGTTCAATTTGGTTG+GGG 0.508259 2.1:+5887469 MS.gene032134:CDS
GATGAAATGATGCAGTACTT+TGG 0.511735 2.1:+5888497 MS.gene032134:CDS
TAGAGCTTGGTGGAAAGAAA+AGG 0.512695 2.1:+5887029 MS.gene032134:CDS
GTCGAGAAGAAGCTCTCATT+AGG 0.512866 2.1:+5887499 MS.gene032134:CDS
ATATCATCTAAAAGGAATGA+TGG 0.513812 2.1:-5888458 None:intergenic
CTGATAACATTAGAGCTTGG+TGG 0.517273 2.1:+5887019 MS.gene032134:CDS
TGTCAGTGATGAAGAGATTG+AGG 0.518821 2.1:+5886741 MS.gene032134:CDS
GGAAGAAACGACCACGTTCG+AGG 0.522146 2.1:+5887763 MS.gene032134:CDS
TCCTCAGAGGAAATATCCAT+TGG 0.525115 2.1:+5887221 MS.gene032134:CDS
CTGGGACCATATCTTGTGAC+TGG 0.525198 2.1:-5888212 None:intergenic
GCTAGCAACTATGATGTTGA+TGG 0.525679 2.1:+5887612 MS.gene032134:CDS
CTCTGCTTCATACTTGGCTA+TGG 0.528334 2.1:-5887079 None:intergenic
AAATGAACTGGCTCATGTCC+TGG 0.529359 2.1:-5888011 None:intergenic
AAATGTCGAGGGCACAAGAT+GGG 0.530650 2.1:+5886899 MS.gene032134:CDS
CCAGTTCATTTATCAGGACA+CGG 0.530783 2.1:+5888023 MS.gene032134:CDS
GAGAAGGGAAAACCAGTTAG+TGG 0.532079 2.1:+5886991 MS.gene032134:CDS
TTCCTTCGCGAGTTATCTGA+TGG 0.548644 2.1:-5887702 None:intergenic
AGGCAGCCTAGTAGCGATAA+CGG 0.550005 2.1:+5887519 MS.gene032134:CDS
CAACATCAACATCTGCAGCC+TGG 0.553510 2.1:+5888245 MS.gene032134:CDS
CCGGTGGGCCACCAAGGCGG+AGG 0.554118 2.1:-5887255 None:intergenic
AGATATGGTCCCAGTCAGGA+TGG 0.555307 2.1:+5888221 MS.gene032134:CDS
TTTGGAGAGGCGGATGTGGA+AGG 0.556184 2.1:+5886771 MS.gene032134:CDS
AGACACATTCCCAAACGAGC+TGG 0.557596 2.1:+5888382 MS.gene032134:CDS
TAGCTGCACTCCAGATTCAT+GGG 0.558033 2.1:+5887889 MS.gene032134:CDS
TTGCTAGCACTACTAGCAGC+AGG 0.559279 2.1:-5887597 None:intergenic
CCACCGGGAATGAAGATTGG+TGG 0.559941 2.1:+5887271 MS.gene032134:CDS
CTTGAAGAAGATGTGGAAAG+TGG 0.561365 2.1:+5887347 MS.gene032134:CDS
CCTCTGATAACATTAGAGCT+TGG 0.561811 2.1:+5887016 MS.gene032134:CDS
CAGCTTCATGAGGCATAACA+GGG 0.562451 2.1:-5888172 None:intergenic
TGCAAACAGTATGATTTCCT+CGG 0.564591 2.1:+5888097 MS.gene032134:CDS
GACCTGCAAGATGCAACGCT+CGG 0.564854 2.1:+5887162 MS.gene032134:CDS
TGATGTTGCCCATCCTGACT+GGG 0.565505 2.1:-5888230 None:intergenic
AAAAGGAATGATGGTGATGG+TGG 0.567036 2.1:-5888449 None:intergenic
AGGATCGTATCAAACTCAAA+AGG 0.568104 2.1:+5886791 MS.gene032134:CDS
GTATGGAATCATTCCTGAGA+AGG 0.572173 2.1:+5886975 MS.gene032134:CDS
AAAGCTCGTGGATTTGTGTA+TGG 0.575890 2.1:+5886958 MS.gene032134:CDS
CACATGACTTGAAGAAGATG+TGG 0.577025 2.1:+5887340 MS.gene032134:CDS
AGGTTGCTTCTTAGCTCGAT+CGG 0.579443 2.1:-5887739 None:intergenic
CAGTTCATTTATCAGGACAC+GGG 0.580228 2.1:+5888024 MS.gene032134:CDS
TATGGAATCATTCCTGAGAA+GGG 0.580239 2.1:+5886976 MS.gene032134:CDS
TCCAATGGATATTTCCTCTG+AGG 0.580696 2.1:-5887222 None:intergenic
AATGGATATTTCCTCTGAGG+AGG 0.582773 2.1:-5887219 None:intergenic
GGTGATGAAATTATCGGAGG+AGG 0.587365 2.1:+5888341 MS.gene032134:CDS
TCGCTTCCAGATAGATGACT+TGG 0.588209 2.1:-5887972 None:intergenic
ATGGAAGTGTGCAAAGCTCG+TGG 0.588400 2.1:+5886946 MS.gene032134:CDS
CCACCAATCTTCATTCCCGG+TGG 0.588777 2.1:-5887271 None:intergenic
CCCTCATGTCTTATTTCCGG+CGG 0.590753 2.1:-5887948 None:intergenic
ATGCCTGCAGCAAATATGAA+TGG 0.596398 2.1:+5888320 MS.gene032134:CDS
TCATGTGGTTTCTTATAAGG+AGG 0.596463 2.1:-5887324 None:intergenic
GGAAAGTTCAATTTGGTTGG+GGG 0.600209 2.1:+5887470 MS.gene032134:CDS
GCAAGACAAGATGACGGCAA+AGG 0.603284 2.1:+5887449 MS.gene032134:CDS
GAGGTGCCAGTTCATTTACC+AGG 0.606226 2.1:+5887993 MS.gene032134:CDS
TTCCCGGTGGGCCACCAAGG+CGG 0.606722 2.1:-5887258 None:intergenic
ATAAGAGTAATGATCAAACC+CGG 0.606820 2.1:-5888069 None:intergenic
TCATTCCCGGTGGGCCACCA+AGG 0.607148 2.1:-5887261 None:intergenic
TTGAAGAAGATGTGGAAAGT+GGG 0.608760 2.1:+5887348 MS.gene032134:CDS
AAGGTGAAGTTTGATAGGAA+TGG 0.608844 2.1:+5887048 MS.gene032134:CDS
AAAATGTCGAGGGCACAAGA+TGG 0.611433 2.1:+5886898 MS.gene032134:CDS
AACTGAGAATAGTGCAGCGG+TGG 0.612241 2.1:-5888143 None:intergenic
CCCTAGAGAAGCAAAAGCCG+AGG 0.615253 2.1:+5886848 MS.gene032134:CDS
GATGGTACCGACGATGGTGT+TGG 0.615254 2.1:+5887630 MS.gene032134:CDS
CACCAATCTTCATTCCCGGT+GGG 0.616240 2.1:-5887270 None:intergenic
AAAGTGTGTATATGAGTAGA+CGG 0.616455 2.1:+5888120 MS.gene032134:CDS
GATATGGTCCCAGTCAGGAT+GGG 0.617269 2.1:+5888222 MS.gene032134:CDS
CCGCCGGAAATAAGACATGA+GGG 0.619238 2.1:+5887948 MS.gene032134:CDS
AATTGGTTCACTGTTCGCGG+CGG 0.624847 2.1:-5888270 None:intergenic
TATCAAACTCAAAAGGCTCA+AGG 0.625808 2.1:+5886798 MS.gene032134:CDS
CCAAGCTCTAATGTTATCAG+AGG 0.626452 2.1:-5887016 None:intergenic
TCAAGAAGAAGAACACCAGT+TGG 0.627033 2.1:-5887564 None:intergenic
AACAGAACCAACACCATCGT+CGG 0.629982 2.1:-5887637 None:intergenic
ACTCATATACACACTTTCCG+AGG 0.634311 2.1:-5888114 None:intergenic
AGGCAGAAGATTTGGAGAGG+CGG 0.634433 2.1:+5886761 MS.gene032134:CDS
GACGTACCGTTATCGCTACT+AGG 0.635231 2.1:-5887525 None:intergenic
GCCGCCGGAAATAAGACATG+AGG 0.637786 2.1:+5887947 MS.gene032134:CDS
GCTGCACTTGACCTCGAACG+TGG 0.640254 2.1:-5887774 None:intergenic
TTGAGGCAGAAGATTTGGAG+AGG 0.640791 2.1:+5886758 MS.gene032134:CDS
CGCGTAGGAAGAAAATGTCG+AGG 0.644606 2.1:+5886887 MS.gene032134:CDS
CAGTTCATGTAACAGCACCC+GGG 0.645071 2.1:+5888051 MS.gene032134:CDS
AGATTGTGCTGGTAATGTGT+CGG 0.646269 2.1:-5887796 None:intergenic
TCGCACTTGAATCTACCTCA+TGG 0.652796 2.1:+5887294 MS.gene032134:CDS
AGTCATCTGATCAAGCGCGT+AGG 0.654815 2.1:+5886872 MS.gene032134:CDS
AAGTCATCTATCTGGAAGCG+AGG 0.655312 2.1:+5887974 MS.gene032134:CDS
ATCGAGCTAAGAAGCAACCT+AGG 0.657044 2.1:+5887742 MS.gene032134:CDS
TGCAACTGAGAATAGTGCAG+CGG 0.657420 2.1:-5888146 None:intergenic
AACCATCAGATAACTCGCGA+AGG 0.657732 2.1:+5887700 MS.gene032134:CDS
ATGCTTGCAAGACAAGATGA+CGG 0.662559 2.1:+5887443 MS.gene032134:CDS
AGATTATAATCAGCTTCATG+AGG 0.669056 2.1:-5888182 None:intergenic
AACACTGTGATCCTCCTCAG+AGG 0.669904 2.1:+5887208 MS.gene032134:CDS
GCTTGATCAGATGACTGCCT+CGG 0.670144 2.1:-5886865 None:intergenic
CGCCGGAAATAAGACATGAG+GGG 0.670859 2.1:+5887949 MS.gene032134:CDS
TCTAAAAGGAATGATGGTGA+TGG 0.676090 2.1:-5888452 None:intergenic
TAAGAGTAATGATCAAACCC+GGG 0.678500 2.1:-5888068 None:intergenic
TAAGGAGGACTCTGACCATG+AGG 0.682592 2.1:-5887309 None:intergenic
AATGGTGATGAAATTATCGG+AGG 0.683666 2.1:+5888338 MS.gene032134:CDS
GCGTAGGAAGAAAATGTCGA+GGG 0.687094 2.1:+5886888 MS.gene032134:CDS
AGAGTGTCTTGCTATGAGCG+AGG 0.692638 2.1:+5887098 MS.gene032134:CDS
AGTTCATTTATCAGGACACG+GGG 0.707481 2.1:+5888025 MS.gene032134:CDS
GATGTTGATGGTACCGACGA+TGG 0.714346 2.1:+5887624 MS.gene032134:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACTCCAAAATCTAATAA+TGG - chr2.1:5888422-5888441 None:intergenic 20.0%
!! CACAGAACAATAAAATAAAT+TGG - chr2.1:5886617-5886636 None:intergenic 20.0%
!! TATTAGATATCACAATATTC+CGG + chr2.1:5886711-5886730 MS.gene032134:CDS 20.0%
!! TTATTAGGGTAGAAAAAATA+AGG + chr2.1:5886188-5886207 MS.gene032134:intron 20.0%
!! TTGTTAAAGTGTAAAAATGT+CGG + chr2.1:5886153-5886172 MS.gene032134:intron 20.0%
!!! ACTTATCAAATAAGTTGAAA+TGG - chr2.1:5886582-5886601 None:intergenic 20.0%
!!! ATGTGTTATGTGAAATTTTT+GGG + chr2.1:5886308-5886327 MS.gene032134:intron 20.0%
!!! ATGTTTTGTGTGAAATTTTT+GGG + chr2.1:5886120-5886139 MS.gene032134:intron 20.0%
!!! CAATTTATTTTATTGTTCTG+TGG + chr2.1:5886615-5886634 MS.gene032134:intron 20.0%
!!! GGTTTTTGTAAATTTTTTGT+GGG + chr2.1:5885891-5885910 MS.gene032134:intron 20.0%
!!! TATGTTTTCAATTTGATTGA+TGG + chr2.1:5886050-5886069 MS.gene032134:intron 20.0%
!!! TATTCTGAGAAATTGAATTT+AGG + chr2.1:5885819-5885838 MS.gene032134:intron 20.0%
!!! TGAATTTAGGTTTTTGTTTT+TGG + chr2.1:5885832-5885851 MS.gene032134:intron 20.0%
!!! TGGTTTTTGTAAATTTTTTG+TGG + chr2.1:5885890-5885909 MS.gene032134:intron 20.0%
! ATATCATCTAAAAGGAATGA+TGG - chr2.1:5888461-5888480 None:intergenic 25.0%
! ATTAAAACTTAGTGTGTGTT+TGG + chr2.1:5886211-5886230 MS.gene032134:intron 25.0%
! GGACTTTAATGTTGTTAAAT+TGG + chr2.1:5886330-5886349 MS.gene032134:intron 25.0%
! TGATCAAATCATGATTTAGT+TGG + chr2.1:5885973-5885992 MS.gene032134:intron 25.0%
! TGTTAAATTGGAAAAGATGT+CGG + chr2.1:5886342-5886361 MS.gene032134:intron 25.0%
!! ATGAATGGTGATGAAATTAT+CGG + chr2.1:5888335-5888354 MS.gene032134:CDS 25.0%
!! ATTCCTTTTAGATGATATCA+TGG + chr2.1:5888463-5888482 MS.gene032134:CDS 25.0%
!! CATGTGTTATGTGAAATTTT+TGG + chr2.1:5886307-5886326 MS.gene032134:intron 25.0%
!! CATGTTTTGTGTGAAATTTT+TGG + chr2.1:5886119-5886138 MS.gene032134:intron 25.0%
!! TGTGTTATGTGAAATTTTTG+GGG + chr2.1:5886309-5886328 MS.gene032134:intron 25.0%
!! TGTTTTGTGTGAAATTTTTG+GGG + chr2.1:5886121-5886140 MS.gene032134:intron 25.0%
!! TTCCTTTTAGATGATATCAT+GGG + chr2.1:5888464-5888483 MS.gene032134:CDS 25.0%
!!! TAAAAATGTCGGTTTATTGT+CGG + chr2.1:5886164-5886183 MS.gene032134:intron 25.0%
!!! TTCTGTGGATTTTAATTGAA+TGG + chr2.1:5886630-5886649 MS.gene032134:intron 25.0%
AAAGGAAAGTTCAATTTGGT+TGG + chr2.1:5887467-5887486 MS.gene032134:CDS 30.0%
AAAGTGTGTATATGAGTAGA+CGG + chr2.1:5888120-5888139 MS.gene032134:CDS 30.0%
AACATTAAACTGCAAGCTAT+CGG - chr2.1:5886505-5886524 None:intergenic 30.0%
AACCCATGATATCATCTAAA+AGG - chr2.1:5888469-5888488 None:intergenic 30.0%
AAGAAAAGGTGAAGTTTGAT+AGG + chr2.1:5887043-5887062 MS.gene032134:CDS 30.0%
AAGGAAAGTTCAATTTGGTT+GGG + chr2.1:5887468-5887487 MS.gene032134:CDS 30.0%
AAGTCATGTGGTTTCTTATA+AGG - chr2.1:5887330-5887349 None:intergenic 30.0%
AGATTATAATCAGCTTCATG+AGG - chr2.1:5888185-5888204 None:intergenic 30.0%
AGGAAATATCCATTGGAAAA+GGG + chr2.1:5887228-5887247 MS.gene032134:CDS 30.0%
AGTACATCACATTTAATCAG+AGG - chr2.1:5886661-5886680 None:intergenic 30.0%
ATAAGAGTAATGATCAAACC+CGG - chr2.1:5888072-5888091 None:intergenic 30.0%
ATCATGATTTGATCAAAACC+TGG - chr2.1:5885968-5885987 None:intergenic 30.0%
CACCTGATATTGCAAAAATA+AGG + chr2.1:5887400-5887419 MS.gene032134:CDS 30.0%
CTGATATTGCAAAAATAAGG+AGG + chr2.1:5887403-5887422 MS.gene032134:CDS 30.0%
GTTGATTAGGTTAACTCTAT+TGG + chr2.1:5886007-5886026 MS.gene032134:intron 30.0%
TTAGATGATATCATGGGTTT+GGG + chr2.1:5888470-5888489 MS.gene032134:CDS 30.0%
TTAGTTTCCTCAATGTCATT+CGG - chr2.1:5886280-5886299 None:intergenic 30.0%
TTGAAATTGGAGCTGATATT+GGG + chr2.1:5885756-5885775 MS.gene032134:CDS 30.0%
TTGAGAATTTGCAGAAATCA+CGG + chr2.1:5886403-5886422 MS.gene032134:intron 30.0%
TTTAGATGATATCATGGGTT+TGG + chr2.1:5888469-5888488 MS.gene032134:CDS 30.0%
! ATAGCTTGCAGTTTAATGTT+TGG + chr2.1:5886505-5886524 MS.gene032134:intron 30.0%
! GATTTTCCAAAATCACATTG+AGG - chr2.1:5886456-5886475 None:intergenic 30.0%
! GGATCACCATTATTAGATTT+TGG + chr2.1:5888413-5888432 MS.gene032134:CDS 30.0%
! GTTTTGTGATTCTCTGTTAT+TGG + chr2.1:5885870-5885889 MS.gene032134:intron 30.0%
!! AAAAATGTCGGTTTATTGTC+GGG + chr2.1:5886165-5886184 MS.gene032134:intron 30.0%
!!! CTCCTTATTTTTGCAATATC+AGG - chr2.1:5887405-5887424 None:intergenic 30.0%
AAGGTGAAGTTTGATAGGAA+TGG + chr2.1:5887048-5887067 MS.gene032134:CDS 35.0%
AGCTACAATCAGCGTTATTT+CGG - chr2.1:5886253-5886272 None:intergenic 35.0%
AGGAAAGTTCAATTTGGTTG+GGG + chr2.1:5887469-5887488 MS.gene032134:CDS 35.0%
AGGATCGTATCAAACTCAAA+AGG + chr2.1:5886791-5886810 MS.gene032134:CDS 35.0%
ATAGTTATTGCAGCATTCTC+TGG - chr2.1:5888302-5888321 None:intergenic 35.0%
ATATTCGGCAGTTTACTTCT+AGG - chr2.1:5887846-5887865 None:intergenic 35.0%
ATTTCATTGTCAGATTGTGC+TGG - chr2.1:5887810-5887829 None:intergenic 35.0%
CAAGTTCACTTGTACATCTT+TGG + chr2.1:5886553-5886572 MS.gene032134:intron 35.0%
GAGGAAATATCCATTGGAAA+AGG + chr2.1:5887227-5887246 MS.gene032134:CDS 35.0%
GATGAAATGATGCAGTACTT+TGG + chr2.1:5888497-5888516 MS.gene032134:CDS 35.0%
GGTTTATTGTCGGGTTATTA+GGG + chr2.1:5886174-5886193 MS.gene032134:intron 35.0%
GTGTATGTTTGGTATCAAAG+TGG - chr2.1:5886478-5886497 None:intergenic 35.0%
GTTGAAATTGGAGCTGATAT+TGG + chr2.1:5885755-5885774 MS.gene032134:CDS 35.0%
TAAGAGTAATGATCAAACCC+GGG - chr2.1:5888071-5888090 None:intergenic 35.0%
TACAATCCAGTCACAAGATA+TGG + chr2.1:5888206-5888225 MS.gene032134:CDS 35.0%
TATCAAACTCAAAAGGCTCA+AGG + chr2.1:5886798-5886817 MS.gene032134:CDS 35.0%
TATGGAATCATTCCTGAGAA+GGG + chr2.1:5886976-5886995 MS.gene032134:CDS 35.0%
TCATGTGGTTTCTTATAAGG+AGG - chr2.1:5887327-5887346 None:intergenic 35.0%
TCGTCTCTCTCATTCATATT+CGG - chr2.1:5887861-5887880 None:intergenic 35.0%
TGCAAACAGTATGATTTCCT+CGG + chr2.1:5888097-5888116 MS.gene032134:CDS 35.0%
TTGAAGAAGATGTGGAAAGT+GGG + chr2.1:5887348-5887367 MS.gene032134:CDS 35.0%
! AATGGTGATGAAATTATCGG+AGG + chr2.1:5888338-5888357 MS.gene032134:CDS 35.0%
! ATGAGACAGAATCTGTTTTG+AGG + chr2.1:5887925-5887944 MS.gene032134:CDS 35.0%
! CTATCGGTTAAGTGTATGTT+TGG - chr2.1:5886489-5886508 None:intergenic 35.0%
! TCTAAAAGGAATGATGGTGA+TGG - chr2.1:5888455-5888474 None:intergenic 35.0%
! TGTTCTGTGAATTTTTGACC+AGG + chr2.1:5885947-5885966 MS.gene032134:intron 35.0%
!! GGATTGTGTTTGTGTTGATT+AGG + chr2.1:5885994-5886013 MS.gene032134:intron 35.0%
!! GTTCCCATTTCGGTTATTTT+CGG - chr2.1:5887124-5887143 None:intergenic 35.0%
!! TGTCTTGCAAGCATTTTGAT+TGG - chr2.1:5887437-5887456 None:intergenic 35.0%
!! TGTTGGTTCTGTTTCTTCTA+AGG + chr2.1:5887647-5887666 MS.gene032134:CDS 35.0%
AAAGCTCGTGGATTTGTGTA+TGG + chr2.1:5886958-5886977 MS.gene032134:CDS 40.0%
AAGAACACCAGTTGGCATAT+CGG - chr2.1:5887559-5887578 None:intergenic 40.0%
AAGACACTCTGCTTCATACT+TGG - chr2.1:5887088-5887107 None:intergenic 40.0%
ACTCATATACACACTTTCCG+AGG - chr2.1:5888117-5888136 None:intergenic 40.0%
AGACAGGAGCAATCAGTTTA+TGG + chr2.1:5887671-5887690 MS.gene032134:CDS 40.0%
AGAGATTGAGGCAGAAGATT+TGG + chr2.1:5886753-5886772 MS.gene032134:CDS 40.0%
AGGCCGAAAATAACCGAAAT+GGG + chr2.1:5887118-5887137 MS.gene032134:CDS 40.0%
AGTTCATTTATCAGGACACG+GGG + chr2.1:5888025-5888044 MS.gene032134:CDS 40.0%
ATGCCTGCAGCAAATATGAA+TGG + chr2.1:5888320-5888339 MS.gene032134:CDS 40.0%
ATGCTTGCAAGACAAGATGA+CGG + chr2.1:5887443-5887462 MS.gene032134:CDS 40.0%
ATGGGTGAACTCGTTGAAAT+TGG + chr2.1:5885743-5885762 MS.gene032134:CDS 40.0%
CACATCTTCTTCAAGTCATG+TGG - chr2.1:5887342-5887361 None:intergenic 40.0%
CACATGACTTGAAGAAGATG+TGG + chr2.1:5887340-5887359 MS.gene032134:CDS 40.0%
CAGTTCATTTATCAGGACAC+GGG + chr2.1:5888024-5888043 MS.gene032134:CDS 40.0%
CATGAGCCAGTTCATTTATC+AGG + chr2.1:5888017-5888036 MS.gene032134:CDS 40.0%
CCAGTTCATTTATCAGGACA+CGG + chr2.1:5888023-5888042 MS.gene032134:CDS 40.0%
CCTCTGATAACATTAGAGCT+TGG + chr2.1:5887016-5887035 MS.gene032134:CDS 40.0%
CGGCAAAGGAAAGTTCAATT+TGG + chr2.1:5887463-5887482 MS.gene032134:CDS 40.0%
CGGTTTATTGTCGGGTTATT+AGG + chr2.1:5886173-5886192 MS.gene032134:intron 40.0%
CTGATAACATTAGAGCTTGG+TGG + chr2.1:5887019-5887038 MS.gene032134:CDS 40.0%
CTTGAAGAAGATGTGGAAAG+TGG + chr2.1:5887347-5887366 MS.gene032134:CDS 40.0%
GCTAGCAACTATGATGTTGA+TGG + chr2.1:5887612-5887631 MS.gene032134:CDS 40.0%
GGAAAGTTCAATTTGGTTGG+GGG + chr2.1:5887470-5887489 MS.gene032134:CDS 40.0%
GTATGGAATCATTCCTGAGA+AGG + chr2.1:5886975-5886994 MS.gene032134:CDS 40.0%
TAAGTACATGCTGAAGCTCA+TGG + chr2.1:5886927-5886946 MS.gene032134:CDS 40.0%
TCAAGAAGAAGAACACCAGT+TGG - chr2.1:5887567-5887586 None:intergenic 40.0%
TCATCACTGACATCTTTCTC+CGG - chr2.1:5886733-5886752 None:intergenic 40.0%
TCATGTCCTGGTAAATGAAC+TGG - chr2.1:5888002-5888021 None:intergenic 40.0%
TCCAATGGATATTTCCTCTG+AGG - chr2.1:5887225-5887244 None:intergenic 40.0%
TCCTCAGAGGAAATATCCAT+TGG + chr2.1:5887221-5887240 MS.gene032134:CDS 40.0%
TGTCAGTGATGAAGAGATTG+AGG + chr2.1:5886741-5886760 MS.gene032134:CDS 40.0%
TTATCAGAGGAACCACTAAC+TGG - chr2.1:5887006-5887025 None:intergenic 40.0%
! AATGGATATTTCCTCTGAGG+AGG - chr2.1:5887222-5887241 None:intergenic 40.0%
! AGATTGTGCTGGTAATGTGT+CGG - chr2.1:5887799-5887818 None:intergenic 40.0%
! CCAAGCTCTAATGTTATCAG+AGG - chr2.1:5887019-5887038 None:intergenic 40.0%
! CTGTTTCTTCTAAGGAAGAC+AGG + chr2.1:5887655-5887674 MS.gene032134:CDS 40.0%
! TAGAGCTTGGTGGAAAGAAA+AGG + chr2.1:5887029-5887048 MS.gene032134:CDS 40.0%
! TCACCATTCATATTTGCTGC+AGG - chr2.1:5888326-5888345 None:intergenic 40.0%
!! AAAAGGAATGATGGTGATGG+TGG - chr2.1:5888452-5888471 None:intergenic 40.0%
!! GGTTTGAAGTACTGTGCAAT+AGG + chr2.1:5886071-5886090 MS.gene032134:intron 40.0%
!! TTAGTGTGTGTTTGGTGTTG+TGG + chr2.1:5886219-5886238 MS.gene032134:intron 40.0%
!!! CTTGCAAGCATTTTGATTGG+CGG - chr2.1:5887434-5887453 None:intergenic 40.0%
AACAGAACCAACACCATCGT+CGG - chr2.1:5887640-5887659 None:intergenic 45.0%
AACCATCAGATAACTCGCGA+AGG + chr2.1:5887700-5887719 MS.gene032134:CDS 45.0%
AAGTCATCTATCTGGAAGCG+AGG + chr2.1:5887974-5887993 MS.gene032134:CDS 45.0%
ACTGTGCAATAGGTGTACTG+AGG + chr2.1:5886081-5886100 MS.gene032134:intron 45.0%
AGGTTGCTTCTTAGCTCGAT+CGG - chr2.1:5887742-5887761 None:intergenic 45.0%
ATCGAGCTAAGAAGCAACCT+AGG + chr2.1:5887742-5887761 MS.gene032134:CDS 45.0%
CAAAATCACATTGAGGCACG+TGG - chr2.1:5886449-5886468 None:intergenic 45.0%
CAAACCTATCCAGCTCGTTT+GGG - chr2.1:5888394-5888413 None:intergenic 45.0%
CAGCTTCATGAGGCATAACA+GGG - chr2.1:5888175-5888194 None:intergenic 45.0%
CCAGATTCATGGGAATGAAC+AGG + chr2.1:5887899-5887918 MS.gene032134:CDS 45.0%
CCGTGTCCTGATAAATGAAC+TGG - chr2.1:5888026-5888045 None:intergenic 45.0%
CCTGTTCATTCCCATGAATC+TGG - chr2.1:5887902-5887921 None:intergenic 45.0%
CTCTGCTTCATACTTGGCTA+TGG - chr2.1:5887082-5887101 None:intergenic 45.0%
GAGAAGGGAAAACCAGTTAG+TGG + chr2.1:5886991-5887010 MS.gene032134:CDS 45.0%
GAGGCCGAAAATAACCGAAA+TGG + chr2.1:5887117-5887136 MS.gene032134:CDS 45.0%
GCATTCTCTGGTTGCCTAAT+TGG - chr2.1:5888290-5888309 None:intergenic 45.0%
GCGTAGGAAGAAAATGTCGA+GGG + chr2.1:5886888-5886907 MS.gene032134:CDS 45.0%
GGAATTACCGATATGCCAAC+TGG + chr2.1:5887549-5887568 MS.gene032134:CDS 45.0%
GGTGATGAAATTATCGGAGG+AGG + chr2.1:5888341-5888360 MS.gene032134:CDS 45.0%
GTCGAGAAGAAGCTCTCATT+AGG + chr2.1:5887499-5887518 MS.gene032134:CDS 45.0%
TAGCTGCACTCCAGATTCAT+GGG + chr2.1:5887889-5887908 MS.gene032134:CDS 45.0%
TCAGCTTCATGAGGCATAAC+AGG - chr2.1:5888176-5888195 None:intergenic 45.0%
TCGCACTTGAATCTACCTCA+TGG + chr2.1:5887294-5887313 MS.gene032134:CDS 45.0%
TCGCGAGTTATCTGATGGTT+CGG - chr2.1:5887700-5887719 None:intergenic 45.0%
TCGCTTCCAGATAGATGACT+TGG - chr2.1:5887975-5887994 None:intergenic 45.0%
TCTTAGCTCGATCGGAATCT+TGG - chr2.1:5887734-5887753 None:intergenic 45.0%
TGCAACTGAGAATAGTGCAG+CGG - chr2.1:5888149-5888168 None:intergenic 45.0%
TTCCTTCGCGAGTTATCTGA+TGG - chr2.1:5887705-5887724 None:intergenic 45.0%
TTGAGGCAGAAGATTTGGAG+AGG + chr2.1:5886758-5886777 MS.gene032134:CDS 45.0%
! AAAATGTCGAGGGCACAAGA+TGG + chr2.1:5886898-5886917 MS.gene032134:CDS 45.0%
! AAATGAACTGGCTCATGTCC+TGG - chr2.1:5888014-5888033 None:intergenic 45.0%
! AAATGTCGAGGGCACAAGAT+GGG + chr2.1:5886899-5886918 MS.gene032134:CDS 45.0%
! CACGTGCCTCAATGTGATTT+TGG + chr2.1:5886447-5886466 MS.gene032134:intron 45.0%
! CCTAATTGGTTCACTGTTCG+CGG - chr2.1:5888276-5888295 None:intergenic 45.0%
! GCTTTTGCCGAATGACATTG+AGG + chr2.1:5886270-5886289 MS.gene032134:intron 45.0%
!!! CTAACTGGTTTTCCCTTCTC+AGG - chr2.1:5886991-5887010 None:intergenic 45.0%
AACACTGTGATCCTCCTCAG+AGG + chr2.1:5887208-5887227 MS.gene032134:CDS 50.0%
AACTGAGAATAGTGCAGCGG+TGG - chr2.1:5888146-5888165 None:intergenic 50.0%
AAGATTTGGAGAGGCGGATG+TGG + chr2.1:5886767-5886786 MS.gene032134:CDS 50.0%
AGACACATTCCCAAACGAGC+TGG + chr2.1:5888382-5888401 MS.gene032134:CDS 50.0%
AGATATGGTCCCAGTCAGGA+TGG + chr2.1:5888221-5888240 MS.gene032134:CDS 50.0%
AGGCAGAAGATTTGGAGAGG+CGG + chr2.1:5886761-5886780 MS.gene032134:CDS 50.0%
AGGCAGCCTAGTAGCGATAA+CGG + chr2.1:5887519-5887538 MS.gene032134:CDS 50.0%
AGTCATCTGATCAAGCGCGT+AGG + chr2.1:5886872-5886891 MS.gene032134:CDS 50.0%
CAACATCAACATCTGCAGCC+TGG + chr2.1:5888245-5888264 MS.gene032134:CDS 50.0%
CACAAGATATGGTCCCAGTC+AGG + chr2.1:5888217-5888236 MS.gene032134:CDS 50.0%
CACCAATCTTCATTCCCGGT+GGG - chr2.1:5887273-5887292 None:intergenic 50.0%
CAGTTCATGTAACAGCACCC+GGG + chr2.1:5888051-5888070 MS.gene032134:CDS 50.0%
CATTCCCAAACGAGCTGGAT+AGG + chr2.1:5888387-5888406 MS.gene032134:CDS 50.0%
CCAAACCTATCCAGCTCGTT+TGG - chr2.1:5888395-5888414 None:intergenic 50.0%
CCAAACGAGCTGGATAGGTT+TGG + chr2.1:5888392-5888411 MS.gene032134:CDS 50.0%
CCAGTTCATGTAACAGCACC+CGG + chr2.1:5888050-5888069 MS.gene032134:CDS 50.0%
CCGCCGGAAATAAGACATGA+GGG + chr2.1:5887948-5887967 MS.gene032134:CDS 50.0%
CCGCGAACAGTGAACCAATT+AGG + chr2.1:5888273-5888292 MS.gene032134:CDS 50.0%
CGACCACCAATCTTCATTCC+CGG - chr2.1:5887277-5887296 None:intergenic 50.0%
CGCCGGAAATAAGACATGAG+GGG + chr2.1:5887949-5887968 MS.gene032134:CDS 50.0%
CGCGTAGGAAGAAAATGTCG+AGG + chr2.1:5886887-5886906 MS.gene032134:CDS 50.0%
CTGGGACCATATCTTGTGAC+TGG - chr2.1:5888215-5888234 None:intergenic 50.0%
GAACGTGGTCGTTTCTTCCT+AGG - chr2.1:5887762-5887781 None:intergenic 50.0%
GACGTACCGTTATCGCTACT+AGG - chr2.1:5887528-5887547 None:intergenic 50.0%
GATATGGTCCCAGTCAGGAT+GGG + chr2.1:5888222-5888241 MS.gene032134:CDS 50.0%
GCTTGATCAGATGACTGCCT+CGG - chr2.1:5886868-5886887 None:intergenic 50.0%
GTAGCTGCACTCCAGATTCA+TGG + chr2.1:5887888-5887907 MS.gene032134:CDS 50.0%
TAAGGAGGACTCTGACCATG+AGG - chr2.1:5887312-5887331 None:intergenic 50.0%
TCATACTTGGCTATGGCTGC+AGG - chr2.1:5887075-5887094 None:intergenic 50.0%
TGATGTTGCCCATCCTGACT+GGG - chr2.1:5888233-5888252 None:intergenic 50.0%
TTGATGTTGCCCATCCTGAC+TGG - chr2.1:5888234-5888253 None:intergenic 50.0%
TTGCTAGCACTACTAGCAGC+AGG - chr2.1:5887600-5887619 None:intergenic 50.0%
! AATTGGTTCACTGTTCGCGG+CGG - chr2.1:5888273-5888292 None:intergenic 50.0%
! AGAGTGTCTTGCTATGAGCG+AGG + chr2.1:5887098-5887117 MS.gene032134:CDS 50.0%
! AGTAGCGATAACGGTACGTC+TGG + chr2.1:5887528-5887547 MS.gene032134:CDS 50.0%
! ATGGAAGTGTGCAAAGCTCG+TGG + chr2.1:5886946-5886965 MS.gene032134:CDS 50.0%
! CCTCGGCTTTTGCTTCTCTA+GGG - chr2.1:5886851-5886870 None:intergenic 50.0%
! GAGGTGCCAGTTCATTTACC+AGG + chr2.1:5887993-5888012 MS.gene032134:CDS 50.0%
! GCAAGACAAGATGACGGCAA+AGG + chr2.1:5887449-5887468 MS.gene032134:CDS 50.0%
! GGAGGAACACCCTTTTCCAA+TGG - chr2.1:5887240-5887259 None:intergenic 50.0%
!! CCCTCATGTCTTATTTCCGG+CGG - chr2.1:5887951-5887970 None:intergenic 50.0%
!! GATGTTGATGGTACCGACGA+TGG + chr2.1:5887624-5887643 MS.gene032134:CDS 50.0%
!! GGCCCCTCATGTCTTATTTC+CGG - chr2.1:5887954-5887973 None:intergenic 50.0%
!! GTGTGTGTTTGGTGTTGTGG+AGG + chr2.1:5886222-5886241 MS.gene032134:intron 50.0%
!! TGCTCTGGGAGTTCCCATTT+CGG - chr2.1:5887134-5887153 None:intergenic 50.0%
!!! AGAATCTGTTTTGAGGCCGC+CGG + chr2.1:5887932-5887951 MS.gene032134:CDS 50.0%
ACCTGCAAGATGCAACGCTC+GGG + chr2.1:5887163-5887182 MS.gene032134:CDS 55.0%
CCACCAATCTTCATTCCCGG+TGG - chr2.1:5887274-5887293 None:intergenic 55.0%
CCACCGGGAATGAAGATTGG+TGG + chr2.1:5887271-5887290 MS.gene032134:CDS 55.0%
CCCTAGAGAAGCAAAAGCCG+AGG + chr2.1:5886848-5886867 MS.gene032134:CDS 55.0%
GACCTGCAAGATGCAACGCT+CGG + chr2.1:5887162-5887181 MS.gene032134:CDS 55.0%
GAGGGGCCAAGTCATCTATC+TGG + chr2.1:5887966-5887985 MS.gene032134:CDS 55.0%
GCCGCCGGAAATAAGACATG+AGG + chr2.1:5887947-5887966 MS.gene032134:CDS 55.0%
GCGTTGCATCTTGCAGGTCT+TGG - chr2.1:5887161-5887180 None:intergenic 55.0%
GGAAGAAACGACCACGTTCG+AGG + chr2.1:5887763-5887782 MS.gene032134:CDS 55.0%
TTTGGAGAGGCGGATGTGGA+AGG + chr2.1:5886771-5886790 MS.gene032134:CDS 55.0%
! ATTGGTTCACTGTTCGCGGC+GGG - chr2.1:5888272-5888291 None:intergenic 55.0%
! GCCTCGGCTTTTGCTTCTCT+AGG - chr2.1:5886852-5886871 None:intergenic 55.0%
!! AAAAGGGTGTTCCTCCGCCT+TGG + chr2.1:5887244-5887263 MS.gene032134:CDS 55.0%
!! CCGGGTGCTGTTACATGAAC+TGG - chr2.1:5888053-5888072 None:intergenic 55.0%
!! GATGGTACCGACGATGGTGT+TGG + chr2.1:5887630-5887649 MS.gene032134:CDS 55.0%
CAGGTCTTGGAGCGTGCTCT+GGG - chr2.1:5887148-5887167 None:intergenic 60.0%
GCTGCACTTGACCTCGAACG+TGG - chr2.1:5887777-5887796 None:intergenic 60.0%
GGCCCACCGGGAATGAAGAT+TGG + chr2.1:5887268-5887287 MS.gene032134:CDS 60.0%
! ACCCGAGCGTTGCATCTTGC+AGG - chr2.1:5887167-5887186 None:intergenic 60.0%
GCAGGTCTTGGAGCGTGCTC+TGG - chr2.1:5887149-5887168 None:intergenic 65.0%
TCATTCCCGGTGGGCCACCA+AGG - chr2.1:5887264-5887283 None:intergenic 65.0%
! AGGGTGTTCCTCCGCCTTGG+TGG + chr2.1:5887247-5887266 MS.gene032134:CDS 65.0%
TCACTGTTCGCGGCGGGACC+AGG - chr2.1:5888266-5888285 None:intergenic 70.0%
TTCCCGGTGGGCCACCAAGG+CGG - chr2.1:5887261-5887280 None:intergenic 70.0%
! CCTCCGCCTTGGTGGCCCAC+CGG + chr2.1:5887255-5887274 MS.gene032134:CDS 75.0%
! CTCCGCCTTGGTGGCCCACC+GGG + chr2.1:5887256-5887275 MS.gene032134:CDS 75.0%
! CCGGTGGGCCACCAAGGCGG+AGG - chr2.1:5887258-5887277 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 5885743 5888526 5885743 ID=MS.gene032134
chr2.1 mRNA 5885743 5888526 5885743 ID=MS.gene032134.t1;Parent=MS.gene032134
chr2.1 exon 5885743 5885777 5885743 ID=MS.gene032134.t1.exon1;Parent=MS.gene032134.t1
chr2.1 CDS 5885743 5885777 5885743 ID=cds.MS.gene032134.t1;Parent=MS.gene032134.t1
chr2.1 exon 5886690 5888526 5886690 ID=MS.gene032134.t1.exon2;Parent=MS.gene032134.t1
chr2.1 CDS 5886690 5888526 5886690 ID=cds.MS.gene032134.t1;Parent=MS.gene032134.t1
Gene Sequence

>MS.gene032134

ATGGGTGAACTCGTTGAAATTGGAGCTGATATTGGGTATGTGTAAAAAATTCTCTCTCTCTTTTTTTTTTTTTTATTATTCTGAGAAATTGAATTTAGGTTTTTGTTTTTGGATTTATATGTAACATGTTTTGTGATTCTCTGTTATTGGTTTTTGTAAATTTTTTGTGGGTTTGTGTTTTTTTGTTCAATGATGTTTTTTTTGTGTTCTGTGAATTTTTGACCAGGTTTTGATCAAATCATGATTTAGTTGGATTGTGTTTGTGTTGATTAGGTTAACTCTATTGGAATTTACAATTGTTTGTAACTATGTTTTCAATTTGATTGATGGTTTGAAGTACTGTGCAATAGGTGTACTGAGGAATCTAAGAGAAGTACATGTTTTGTGTGAAATTTTTGGGGACTTTAATGTTGTTAAAGTGTAAAAATGTCGGTTTATTGTCGGGTTATTAGGGTAGAAAAAATAAGGATTAAAACTTAGTGTGTGTTTGGTGTTGTGGAGGATTTGCCGAAATAACGCTGATTGTAGCTTTTGCCGAATGACATTGAGGAAACTAAGAAATTACATGTGTTATGTGAAATTTTTGGGGACTTTAATGTTGTTAAATTGGAAAAGATGTCGGAAAAGTATGAATTGAAATTTAGTGTATGTTTAATGTCGTTGAGAATTTGCAGAAATCACGGTCATTGTAGCTTTTGCAAAACCACGTGCCTCAATGTGATTTTGGAAAATCCACTTTGATACCAAACATACACTTAACCGATAGCTTGCAGTTTAATGTTTGGTGTTTCAATAATCATTTAGAATATGCAAGTTCACTTGTACATCTTTGGATGCCATTTCAACTTATTTGATAAGTTCAAAGTATGTGCCAATTTATTTTATTGTTCTGTGGATTTTAATTGAATGGAGTATCCTCTGATTAAATGTGATGTACTGAATTACAGCTCAGATTTAGATGTCGACGATATTAGATATCACAATATTCCGGAGAAAGATGTCAGTGATGAAGAGATTGAGGCAGAAGATTTGGAGAGGCGGATGTGGAAGGATCGTATCAAACTCAAAAGGCTCAAGGAAAAACAAAAGCTTGCAGCACAGCAAGCCCTAGAGAAGCAAAAGCCGAGGCAGTCATCTGATCAAGCGCGTAGGAAGAAAATGTCGAGGGCACAAGATGGGATTCTTAAGTACATGCTGAAGCTCATGGAAGTGTGCAAAGCTCGTGGATTTGTGTATGGAATCATTCCTGAGAAGGGAAAACCAGTTAGTGGTTCCTCTGATAACATTAGAGCTTGGTGGAAAGAAAAGGTGAAGTTTGATAGGAATGGTCCTGCAGCCATAGCCAAGTATGAAGCAGAGTGTCTTGCTATGAGCGAGGCCGAAAATAACCGAAATGGGAACTCCCAGAGCACGCTCCAAGACCTGCAAGATGCAACGCTCGGGTCACTATTATCTTCTTTGATGCAACACTGTGATCCTCCTCAGAGGAAATATCCATTGGAAAAGGGTGTTCCTCCGCCTTGGTGGCCCACCGGGAATGAAGATTGGTGGTCGCACTTGAATCTACCTCATGGTCAGAGTCCTCCTTATAAGAAACCACATGACTTGAAGAAGATGTGGAAAGTGGGAGTGCTAACTGCTGTTATAAAGCACATGTCACCTGATATTGCAAAAATAAGGAGGCACGTCCGCCAATCAAAATGCTTGCAAGACAAGATGACGGCAAAGGAAAGTTCAATTTGGTTGGGGGTATTGAGTCGAGAAGAAGCTCTCATTAGGCAGCCTAGTAGCGATAACGGTACGTCTGGAATTACCGATATGCCAACTGGTGTTCTTCTTCTTGAGTATAAGCAACCTGCTGCTAGTAGTGCTAGCAACTATGATGTTGATGGTACCGACGATGGTGTTGGTTCTGTTTCTTCTAAGGAAGACAGGAGCAATCAGTTTATGGATGCCGAACCATCAGATAACTCGCGAAGGAATTCTGTCCAAGATTCCGATCGAGCTAAGAAGCAACCTAGGAAGAAACGACCACGTTCGAGGTCAAGTGCAGCCGACACATTACCAGCACAATCTGACAATGAAATTTTGCATGTTGAACCTAGAAGTAAACTGCCGAATATGAATGAGAGAGACGAAACACATGTAGCTGCACTCCAGATTCATGGGAATGAACAGGTCAATGAGACAGAATCTGTTTTGAGGCCGCCGGAAATAAGACATGAGGGGCCAAGTCATCTATCTGGAAGCGAGGTGCCAGTTCATTTACCAGGACATGAGCCAGTTCATTTATCAGGACACGGGGTGCCAGTTCATGTAACAGCACCCGGGTTTGATCATTACTCTTATATGCATGCAAACAGTATGATTTCCTCGGAAAGTGTGTATATGAGTAGACGGCCACCGCTGCACTATTCTCAGTTGCAAAACCCTGTTATGCCTCATGAAGCTGATTATAATCTGTACAATCCAGTCACAAGATATGGTCCCAGTCAGGATGGGCAACATCAACATCTGCAGCCTGGTCCCGCCGCGAACAGTGAACCAATTAGGCAACCAGAGAATGCTGCAATAACTATGCCTGCAGCAAATATGAATGGTGATGAAATTATCGGAGGAGGCATGAATTATCTTGCTAAAGACACATTCCCAAACGAGCTGGATAGGTTTGGATCACCATTATTAGATTTTGGAGTTTTTGAGAATCCACCATCACCATCATTCCTTTTAGATGATATCATGGGTTTGGGTGACGATGAAATGATGCAGTACTTTGGAGCATAG
Protein sequence

>MS.gene032134.t1

MGELVEIGADIGSDLDVDDIRYHNIPEKDVSDEEIEAEDLERRMWKDRIKLKRLKEKQKLAAQQALEKQKPRQSSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGSSDNIRAWWKEKVKFDRNGPAAIAKYEAECLAMSEAENNRNGNSQSTLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPTGNEDWWSHLNLPHGQSPPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRRHVRQSKCLQDKMTAKESSIWLGVLSREEALIRQPSSDNGTSGITDMPTGVLLLEYKQPAASSASNYDVDGTDDGVGSVSSKEDRSNQFMDAEPSDNSRRNSVQDSDRAKKQPRKKRPRSRSSAADTLPAQSDNEILHVEPRSKLPNMNERDETHVAALQIHGNEQVNETESVLRPPEIRHEGPSHLSGSEVPVHLPGHEPVHLSGHGVPVHVTAPGFDHYSYMHANSMISSESVYMSRRPPLHYSQLQNPVMPHEADYNLYNPVTRYGPSQDGQHQHLQPGPAANSEPIRQPENAAITMPAANMNGDEIIGGGMNYLAKDTFPNELDRFGSPLLDFGVFENPPSPSFLLDDIMGLGDDEMMQYFGA