AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene032313

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032313.t1 MTR_8g059170 97.264 329 9 0 1 329 1 329 0.0 670
MS.gene032313.t1 MTR_2g079990 63.584 346 101 8 1 326 3 343 2.15e-145 414
MS.gene032313.t1 MTR_2g079990 58.824 374 101 9 1 326 3 371 4.91e-139 399
MS.gene032313.t1 MTR_3g088110 70.552 163 46 2 10 171 3 164 1.55e-78 241
MS.gene032313.t1 MTR_2g080010 64.740 173 50 3 11 172 12 184 3.66e-74 233
MS.gene032313.t1 MTR_7g085220 46.233 292 112 10 1 266 1 273 4.50e-74 232
MS.gene032313.t1 MTR_4g089135 63.388 183 44 3 14 173 15 197 2.64e-73 230
MS.gene032313.t1 MTR_8g094580 68.944 161 47 2 12 170 5 164 2.69e-73 228
MS.gene032313.t1 MTR_3g096920 67.683 164 45 3 11 170 4 163 4.51e-73 228
MS.gene032313.t1 MTR_2157s0010 57.143 210 70 6 14 209 8 211 2.52e-71 222
MS.gene032313.t1 MTR_5g041940 62.500 160 58 1 12 169 1 160 2.90e-71 222
MS.gene032313.t1 MTR_4g081870 63.399 153 54 1 14 164 9 161 1.05e-69 218
MS.gene032313.t1 MTR_7g100990 57.436 195 73 4 5 195 2 190 4.94e-69 218
MS.gene032313.t1 MTR_3g096920 56.061 198 48 3 11 170 4 200 2.19e-67 214
MS.gene032313.t1 MTR_2g093810 59.770 174 61 3 10 174 10 183 7.56e-67 213
MS.gene032313.t1 MTR_2g064090 53.179 173 74 3 9 179 1 168 5.99e-60 196
MS.gene032313.t1 MTR_6g084430 56.962 158 64 2 13 170 4 157 3.01e-59 193
MS.gene032313.t1 MTR_6g012670 54.375 160 73 0 11 170 17 176 3.80e-59 193
MS.gene032313.t1 MTR_4g108760 55.625 160 71 0 11 170 14 173 6.41e-59 193
MS.gene032313.t1 MTR_5g076850 57.500 160 64 2 9 166 1 158 6.66e-59 200
MS.gene032313.t1 MTR_3g435150 53.073 179 84 0 11 189 13 191 8.75e-58 189
MS.gene032313.t1 MTR_7g085260 55.828 163 68 1 12 170 15 177 2.71e-57 190
MS.gene032313.t1 MTR_3g109340 54.375 160 68 2 13 170 21 177 4.01e-56 186
MS.gene032313.t1 MTR_3g064580 57.500 160 65 2 9 166 1 159 4.61e-56 193
MS.gene032313.t1 MTR_6g477900 52.830 159 71 2 9 165 1 157 7.28e-56 182
MS.gene032313.t1 MTR_3g070030 47.120 191 98 3 11 198 16 206 3.20e-55 184
MS.gene032313.t1 MTR_4g134460 58.000 150 58 2 16 164 56 201 5.85e-55 185
MS.gene032313.t1 MTR_3g109340 53.750 160 68 2 13 170 21 176 1.31e-54 182
MS.gene032313.t1 MTR_2g078700 55.769 156 67 1 14 167 23 178 2.94e-54 182
MS.gene032313.t1 MTR_1g008740 52.174 161 71 3 13 170 26 183 3.71e-54 181
MS.gene032313.t1 MTR_1g008740 52.174 161 71 3 13 170 12 169 4.21e-54 181
MS.gene032313.t1 MTR_5g040420 53.614 166 68 4 16 172 16 181 1.23e-53 181
MS.gene032313.t1 MTR_6g032770 52.695 167 77 1 12 176 16 182 2.78e-53 179
MS.gene032313.t1 MTR_2g064470 41.256 223 120 5 9 228 6 220 6.94e-53 176
MS.gene032313.t1 MTR_6g011860 52.469 162 69 2 14 167 15 176 1.31e-52 178
MS.gene032313.t1 MTR_4g035590 53.896 154 63 2 14 164 8 156 1.76e-52 176
MS.gene032313.t1 MTR_8g467490 51.497 167 71 5 16 172 16 182 3.12e-52 177
MS.gene032313.t1 MTR_7g011120 48.503 167 79 1 11 170 5 171 3.20e-52 174
MS.gene032313.t1 MTR_2g062730 50.296 169 73 4 11 172 7 171 3.52e-52 176
MS.gene032313.t1 MTR_7g011130 46.821 173 79 1 11 170 16 188 3.70e-51 173
MS.gene032313.t1 MTR_1g096430 40.724 221 109 4 14 231 7 208 5.62e-51 172
MS.gene032313.t1 MTR_5g014300 52.121 165 65 3 13 168 5 164 1.02e-50 171
MS.gene032313.t1 MTR_8g024480 48.780 164 74 3 11 164 12 175 3.42e-50 172
MS.gene032313.t1 MTR_7g005280 54.321 162 65 4 11 170 12 166 4.94e-50 167
MS.gene032313.t1 MTR_2g068920 45.411 207 95 6 16 207 23 226 7.15e-50 168
MS.gene032313.t1 MTR_4g036030 47.468 158 76 2 14 168 7 160 3.14e-49 168
MS.gene032313.t1 MTR_8g076110 48.428 159 75 2 14 169 6 160 3.49e-49 167
MS.gene032313.t1 MTR_4g101680 45.614 171 86 2 14 181 7 173 4.27e-49 168
MS.gene032313.t1 MTR_5g021710 46.875 160 78 2 14 170 8 163 1.77e-48 166
MS.gene032313.t1 MTR_2g068880 51.744 172 67 6 16 172 24 194 1.02e-47 163
MS.gene032313.t1 MTR_5g090970 45.596 193 95 2 16 198 20 212 1.42e-47 162
MS.gene032313.t1 MTR_4g098630 51.829 164 70 4 13 170 5 165 1.16e-46 160
MS.gene032313.t1 MTR_5g012080 48.387 155 73 3 14 164 7 158 1.85e-46 160
MS.gene032313.t1 MTR_8g094580 69.027 113 26 3 63 170 2 110 2.78e-46 157
MS.gene032313.t1 MTR_5g090970 45.596 193 94 3 16 198 20 211 6.08e-46 158
MS.gene032313.t1 MTR_3g093040 40.826 218 106 5 9 223 103 300 8.34e-46 158
MS.gene032313.t1 MTR_1g069805 43.956 182 92 3 13 192 9 182 3.19e-45 155
MS.gene032313.t1 MTR_4g075980 49.375 160 70 3 11 167 13 164 1.22e-44 154
MS.gene032313.t1 MTR_1g090720 50.000 160 74 2 13 166 41 200 1.92e-44 158
MS.gene032313.t1 MTR_5g069030 39.676 247 129 6 9 244 20 257 3.05e-44 160
MS.gene032313.t1 MTR_7g097090 48.684 152 70 2 13 162 9 154 3.21e-44 153
MS.gene032313.t1 MTR_2g086880 43.548 186 84 5 9 193 13 178 8.03e-44 157
MS.gene032313.t1 MTR_2g086880 44.505 182 80 5 13 193 17 178 8.40e-44 159
MS.gene032313.t1 MTR_3g093050 50.920 163 74 3 9 168 17 176 9.83e-44 158
MS.gene032313.t1 MTR_3g116070 56.589 129 53 2 14 139 23 151 1.17e-43 153
MS.gene032313.t1 MTR_3g093050 50.920 163 74 3 9 168 17 176 1.51e-43 158
MS.gene032313.t1 MTR_0036s0150 47.273 165 75 4 12 170 3 161 1.20e-42 154
MS.gene032313.t1 MTR_1g097300 46.795 156 79 3 12 165 17 170 1.52e-42 155
MS.gene032313.t1 MTR_3g098810 48.466 163 74 3 14 168 14 174 2.42e-42 147
MS.gene032313.t1 MTR_3g096140 45.695 151 78 2 16 164 9 157 2.73e-42 148
MS.gene032313.t1 MTR_8g063550 46.452 155 75 3 14 164 6 156 5.46e-42 149
MS.gene032313.t1 MTR_3g096140 45.695 151 78 2 16 164 9 157 1.16e-41 148
MS.gene032313.t1 MTR_8g063550 46.452 155 75 3 14 164 6 156 1.39e-41 150
MS.gene032313.t1 MTR_8g063550 46.452 155 75 3 14 164 6 156 1.72e-41 149
MS.gene032313.t1 MTR_8g099750 46.405 153 75 3 14 161 14 164 4.10e-41 143
MS.gene032313.t1 MTR_3g070040 41.622 185 101 4 18 198 12 193 2.76e-40 144
MS.gene032313.t1 MTR_1g090723 46.203 158 80 3 16 170 10 165 6.98e-40 148
MS.gene032313.t1 MTR_1g090723 46.203 158 79 3 16 170 10 164 1.00e-39 147
MS.gene032313.t1 MTR_1g090723 46.203 158 79 3 16 170 10 164 1.03e-39 147
MS.gene032313.t1 MTR_8g093580 43.791 153 82 2 14 164 6 156 5.07e-39 144
MS.gene032313.t1 MTR_3g098810 53.030 132 56 2 14 141 14 143 1.05e-37 132
MS.gene032313.t1 MTR_2g086690 46.795 156 75 5 15 162 5 160 2.33e-36 131
MS.gene032313.t1 MTR_4g094302 42.593 162 79 3 14 169 11 164 3.26e-36 129
MS.gene032313.t1 MTR_4g052620 43.671 158 78 5 14 162 5 160 5.27e-36 131
MS.gene032313.t1 MTR_7g105170 38.650 163 90 6 13 165 3 165 4.77e-34 125
MS.gene032313.t1 MTR_3g096140 43.382 136 73 2 31 164 3 136 6.52e-34 127
MS.gene032313.t1 MTR_8g023840 47.097 155 65 7 14 161 11 155 6.73e-34 129
MS.gene032313.t1 MTR_4g094302 46.094 128 59 2 14 139 11 130 7.02e-33 119
MS.gene032313.t1 MTR_8g023900 35.593 236 123 10 1 220 173 395 1.57e-30 120
MS.gene032313.t1 MTR_8g023900 40.373 161 75 7 14 164 12 161 2.05e-27 112
MS.gene032313.t1 MTR_8g023930 35.749 207 112 8 14 212 24 217 2.72e-30 120
MS.gene032313.t1 MTR_8g023860 35.945 217 123 8 14 224 12 218 4.53e-29 115
MS.gene032313.t1 MTR_8g093790 34.951 206 104 7 10 211 6 185 4.12e-25 100
MS.gene032313.t1 MTR_8g023880 37.931 174 77 8 10 164 3 164 2.08e-24 100
MS.gene032313.t1 MTR_3g096400 32.075 212 124 7 12 211 5 208 3.79e-22 92.8
MS.gene032313.t1 MTR_7g070140 58.667 75 29 2 67 139 17 91 3.81e-22 90.9
MS.gene032313.t1 MTR_7g083360 29.333 150 97 5 10 153 6 152 1.32e-18 81.6
MS.gene032313.t1 MTR_7g083330 33.077 130 79 5 12 137 16 141 9.17e-15 72.0
MS.gene032313.t1 MTR_8g102240 32.895 152 76 5 12 139 45 194 5.90e-13 69.7
MS.gene032313.t1 MTR_8g102240 32.895 152 76 5 12 139 45 194 5.91e-13 69.7
MS.gene032313.t1 MTR_7g070150 45.205 73 27 3 111 175 9 76 1.62e-12 63.2
MS.gene032313.t1 MTR_1g093680 33.333 141 78 6 14 139 58 197 2.59e-11 64.7
MS.gene032313.t1 MTR_4g078875 31.469 143 80 4 14 139 48 189 2.79e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032313.t1 AT4G27410 63.545 299 81 7 1 295 1 275 2.12e-119 346
MS.gene032313.t1 AT4G27410 60.443 316 80 8 1 295 1 292 1.06e-115 337
MS.gene032313.t1 AT1G52890 64.260 277 82 7 1 263 1 274 4.37e-114 333
MS.gene032313.t1 AT3G15500 64.773 264 76 4 1 251 1 260 1.10e-111 327
MS.gene032313.t1 AT1G01720 70.122 164 46 2 12 173 5 167 2.75e-78 241
MS.gene032313.t1 AT5G08790 61.749 183 66 2 10 189 3 184 6.80e-75 232
MS.gene032313.t1 AT3G04070 65.896 173 47 4 6 168 4 174 2.89e-73 230
MS.gene032313.t1 AT5G63790 61.081 185 62 3 10 188 46 226 1.32e-72 227
MS.gene032313.t1 AT5G63790 61.081 185 62 3 10 188 56 236 1.44e-72 228
MS.gene032313.t1 AT1G61110 63.889 180 48 3 14 179 16 192 6.31e-72 226
MS.gene032313.t1 AT1G77450 52.018 223 100 3 10 231 6 222 1.10e-71 223
MS.gene032313.t1 AT3G04070 60.317 189 47 4 6 168 4 190 9.88e-71 224
MS.gene032313.t1 AT1G69490 65.644 163 52 2 10 169 5 166 2.45e-70 220
MS.gene032313.t1 AT3G15510 65.455 165 42 4 18 169 21 183 1.33e-68 219
MS.gene032313.t1 AT1G52880 65.839 161 45 4 18 168 21 181 2.36e-62 201
MS.gene032313.t1 AT3G18400 47.525 202 97 3 13 214 4 196 2.14e-60 196
MS.gene032313.t1 AT5G07680 54.706 170 77 0 1 170 4 173 6.33e-60 195
MS.gene032313.t1 AT5G61430 56.627 166 71 1 11 176 13 177 1.22e-59 194
MS.gene032313.t1 AT5G07680 56.604 159 69 0 12 170 1 159 1.33e-58 191
MS.gene032313.t1 AT2G24430 55.556 162 67 2 13 172 15 173 1.56e-57 189
MS.gene032313.t1 AT2G24430 55.556 162 67 2 13 172 15 173 1.56e-57 189
MS.gene032313.t1 AT5G53950 50.262 191 87 2 14 196 17 207 3.27e-57 189
MS.gene032313.t1 AT5G39610 55.625 160 71 0 11 170 17 176 3.38e-57 187
MS.gene032313.t1 AT5G18270 50.802 187 90 2 12 197 19 204 5.98e-57 187
MS.gene032313.t1 AT2G02450 53.409 176 75 4 16 188 53 224 8.48e-57 189
MS.gene032313.t1 AT2G02450 53.409 176 75 4 16 188 53 224 1.01e-56 189
MS.gene032313.t1 AT5G18270 50.267 187 91 2 12 197 19 204 1.74e-56 186
MS.gene032313.t1 AT3G04060 50.267 187 86 2 12 197 18 198 2.41e-56 186
MS.gene032313.t1 AT1G65910 54.268 164 71 2 9 170 1 162 3.50e-56 192
MS.gene032313.t1 AT3G03200 54.430 158 69 2 9 164 1 157 3.49e-55 187
MS.gene032313.t1 AT3G15170 47.895 190 95 2 14 199 20 209 5.36e-55 182
MS.gene032313.t1 AT3G17730 49.718 177 83 3 9 181 1 175 5.79e-55 180
MS.gene032313.t1 AT5G17260 54.430 158 69 2 9 164 1 157 1.56e-54 185
MS.gene032313.t1 AT3G29035 54.037 161 74 0 11 171 21 181 3.35e-54 180
MS.gene032313.t1 AT5G39820 50.829 181 66 4 16 173 22 202 6.71e-54 180
MS.gene032313.t1 AT2G43000 48.705 193 88 3 16 199 20 210 1.29e-53 177
MS.gene032313.t1 AT2G33480 56.688 157 63 2 12 168 13 164 1.50e-53 177
MS.gene032313.t1 AT1G26870 53.659 164 67 3 14 168 16 179 3.80e-53 180
MS.gene032313.t1 AT2G33480 55.975 159 59 3 12 168 13 162 1.36e-52 174
MS.gene032313.t1 AT1G54330 54.088 159 66 2 9 165 1 154 9.10e-52 173
MS.gene032313.t1 AT4G17980 50.279 179 85 2 14 188 6 184 9.40e-52 172
MS.gene032313.t1 AT4G17980 50.279 179 85 2 14 188 6 184 1.35e-51 172
MS.gene032313.t1 AT5G13180 55.901 161 63 5 12 170 12 166 1.46e-51 171
MS.gene032313.t1 AT3G12977 42.051 195 103 4 9 203 13 197 1.88e-51 172
MS.gene032313.t1 AT4G10350 51.948 154 69 2 14 164 9 160 2.76e-51 173
MS.gene032313.t1 AT1G71930 45.562 169 85 2 7 172 2 166 4.71e-51 172
MS.gene032313.t1 AT1G71930 45.562 169 85 2 7 172 2 166 4.71e-51 172
MS.gene032313.t1 AT1G33280 51.282 156 68 2 14 166 8 158 8.77e-51 171
MS.gene032313.t1 AT2G46770 43.810 210 100 6 11 202 13 222 1.35e-50 172
MS.gene032313.t1 AT1G56010 48.447 161 79 3 9 166 14 173 1.77e-50 171
MS.gene032313.t1 AT2G18060 42.051 195 105 3 7 197 2 192 3.52e-50 171
MS.gene032313.t1 AT2G18060 42.051 195 105 3 7 197 2 192 3.52e-50 171
MS.gene032313.t1 AT1G79580 51.899 158 67 3 11 164 14 166 9.78e-50 170
MS.gene032313.t1 AT1G79580 51.899 158 67 3 11 164 14 166 9.78e-50 170
MS.gene032313.t1 AT1G79580 51.899 158 67 3 11 164 14 166 9.78e-50 170
MS.gene032313.t1 AT1G79580 51.899 158 67 3 11 164 14 166 9.78e-50 170
MS.gene032313.t1 AT1G79580 51.899 158 67 3 11 164 14 166 9.78e-50 170
MS.gene032313.t1 AT1G76420 49.714 175 73 4 1 164 1 171 1.87e-49 168
MS.gene032313.t1 AT5G66300 47.879 165 76 3 13 174 11 168 2.17e-49 167
MS.gene032313.t1 AT3G61910 40.654 214 99 5 11 206 8 211 4.34e-49 167
MS.gene032313.t1 AT5G46590 55.128 156 64 4 14 165 6 159 5.49e-49 166
MS.gene032313.t1 AT5G62380 42.381 210 106 5 14 219 7 205 3.28e-48 165
MS.gene032313.t1 AT5G62380 42.381 210 106 5 14 219 7 205 3.28e-48 165
MS.gene032313.t1 AT3G10480 50.625 160 75 2 9 166 22 179 5.37e-48 167
MS.gene032313.t1 AT1G12260 45.509 167 84 2 14 177 7 169 5.52e-48 164
MS.gene032313.t1 AT2G17040 41.704 223 104 6 16 223 8 219 5.91e-48 162
MS.gene032313.t1 AT3G10480 50.625 160 76 2 9 166 22 180 7.49e-48 167
MS.gene032313.t1 AT1G12260 45.509 167 84 2 14 177 7 169 8.43e-48 166
MS.gene032313.t1 AT1G32770 46.061 165 78 2 11 164 13 177 1.28e-47 164
MS.gene032313.t1 AT1G32510 48.837 172 78 3 14 176 6 176 1.28e-47 162
MS.gene032313.t1 AT4G36160 49.032 155 72 2 13 164 9 159 2.32e-47 164
MS.gene032313.t1 AT4G36160 49.032 155 72 2 13 164 9 159 2.32e-47 164
MS.gene032313.t1 AT4G36160 49.032 155 72 2 13 164 13 163 2.73e-47 164
MS.gene032313.t1 AT1G62700 48.701 154 72 2 14 164 7 156 3.92e-47 164
MS.gene032313.t1 AT1G62700 48.701 154 72 2 14 164 7 156 3.92e-47 164
MS.gene032313.t1 AT5G46590 58.779 131 51 2 14 141 6 136 1.54e-46 159
MS.gene032313.t1 AT3G10490 49.359 156 76 2 13 166 26 180 1.61e-46 157
MS.gene032313.t1 AT1G33060 48.795 166 81 2 5 168 15 178 2.33e-46 166
MS.gene032313.t1 AT1G33060 48.795 166 81 2 5 168 15 178 2.74e-46 166
MS.gene032313.t1 AT5G24590 46.597 191 95 4 9 195 8 195 7.46e-46 162
MS.gene032313.t1 AT4G35580 51.572 159 71 3 9 164 4 159 9.42e-46 163
MS.gene032313.t1 AT4G35580 51.572 159 71 3 9 164 4 159 9.77e-46 163
MS.gene032313.t1 AT4G35580 51.572 159 71 3 9 164 4 159 1.41e-45 162
MS.gene032313.t1 AT3G10490 49.359 156 76 2 13 166 26 180 1.63e-45 160
MS.gene032313.t1 AT3G12910 48.087 183 77 5 16 183 23 202 1.97e-45 157
MS.gene032313.t1 AT5G04410 49.080 163 79 2 10 170 5 165 8.09e-45 161
MS.gene032313.t1 AT1G34180 41.951 205 99 5 16 216 18 206 1.13e-44 158
MS.gene032313.t1 AT3G10500 48.485 165 77 3 10 170 5 165 1.61e-44 160
MS.gene032313.t1 AT1G34180 41.951 205 99 5 16 216 18 206 7.88e-44 158
MS.gene032313.t1 AT3G49530 50.000 160 73 4 9 164 8 164 5.12e-43 153
MS.gene032313.t1 AT1G34190 45.283 159 79 3 16 170 18 172 6.92e-43 155
MS.gene032313.t1 AT1G34180 40.183 219 95 6 16 216 18 218 9.00e-43 154
MS.gene032313.t1 AT3G10480 43.005 193 74 3 9 166 22 213 1.41e-42 154
MS.gene032313.t1 AT3G49530 50.000 160 73 4 9 164 8 164 1.66e-42 153
MS.gene032313.t1 AT2G27300 45.399 163 75 3 13 170 13 166 4.13e-42 149
MS.gene032313.t1 AT1G34180 40.183 219 95 6 16 216 18 218 5.96e-42 153
MS.gene032313.t1 AT5G64060 44.025 159 85 2 9 165 1 157 1.35e-41 148
MS.gene032313.t1 AT4G28530 45.665 173 70 5 14 168 10 176 3.57e-41 147
MS.gene032313.t1 AT1G32870 50.943 159 74 2 14 170 10 166 1.05e-40 149
MS.gene032313.t1 AT1G32870 50.943 159 74 2 14 170 10 166 1.05e-40 149
MS.gene032313.t1 AT1G32870 50.943 159 74 2 14 170 46 202 2.43e-40 149
MS.gene032313.t1 AT3G44290 43.871 155 76 3 16 169 16 160 1.84e-39 139
MS.gene032313.t1 AT5G22290 39.487 195 100 5 16 200 23 209 5.42e-39 141
MS.gene032313.t1 AT3G44290 43.871 155 76 3 16 169 16 160 1.40e-38 140
MS.gene032313.t1 AT5G61430 57.018 114 48 1 63 176 2 114 7.27e-38 136
MS.gene032313.t1 AT5G09330 42.138 159 88 2 9 165 1 157 7.82e-38 141
MS.gene032313.t1 AT5G09330 42.138 159 88 2 9 165 1 157 7.82e-38 141
MS.gene032313.t1 AT5G09330 42.138 159 88 2 9 165 1 157 7.82e-38 141
MS.gene032313.t1 AT5G09330 42.138 159 88 2 9 165 1 157 7.82e-38 141
MS.gene032313.t1 AT5G09330 42.138 159 88 2 9 165 1 157 7.82e-38 141
MS.gene032313.t1 AT5G64530 41.243 177 72 5 12 171 1 162 6.06e-35 126
MS.gene032313.t1 AT1G56010 53.774 106 46 2 63 166 2 106 2.14e-34 127
MS.gene032313.t1 AT3G12977 43.972 141 69 4 63 203 14 144 2.56e-34 125
MS.gene032313.t1 AT2G33480 55.882 102 43 1 67 168 8 107 1.88e-32 120
MS.gene032313.t1 AT4G10350 55.102 98 42 1 67 164 18 113 4.39e-32 121
MS.gene032313.t1 AT3G44350 39.024 164 89 5 14 169 5 165 1.40e-31 119
MS.gene032313.t1 AT5G22380 33.990 203 110 6 17 209 8 196 1.84e-31 118
MS.gene032313.t1 AT5G64530 46.970 132 56 3 12 141 1 120 4.78e-31 115
MS.gene032313.t1 AT3G44350 41.304 138 71 4 14 143 5 140 1.66e-28 108
MS.gene032313.t1 AT5G04395 40.411 146 71 2 10 139 24 169 4.62e-28 108
MS.gene032313.t1 AT2G43000 43.609 133 64 3 76 199 2 132 5.69e-26 102
MS.gene032313.t1 AT3G04420 41.732 127 70 2 15 137 4 130 1.20e-25 104
MS.gene032313.t1 AT4G28530 35.673 171 53 4 14 168 10 139 2.08e-25 104
MS.gene032313.t1 AT3G04420 41.732 127 70 2 15 137 4 130 3.11e-25 104
MS.gene032313.t1 AT4G01550 30.453 243 137 8 17 241 7 235 8.61e-25 104
MS.gene032313.t1 AT4G27410 43.976 166 65 7 134 295 1 142 1.17e-23 95.9
MS.gene032313.t1 AT4G01520 40.909 132 71 4 15 139 5 136 2.32e-23 98.2
MS.gene032313.t1 AT4G01540 41.538 130 69 4 17 139 7 136 7.81e-23 98.6
MS.gene032313.t1 AT4G01540 36.196 163 84 6 17 169 7 159 9.91e-23 97.8
MS.gene032313.t1 AT4G01540 41.538 130 69 4 17 139 7 136 1.13e-22 98.2
MS.gene032313.t1 AT4G01540 41.538 130 69 4 17 139 7 136 1.14e-22 98.6
MS.gene032313.t1 AT1G02230 40.769 130 67 5 15 137 4 130 1.03e-21 94.7
MS.gene032313.t1 AT1G02220 37.692 130 74 3 12 137 1 127 8.01e-21 92.4
MS.gene032313.t1 AT5G50820 34.054 185 100 7 12 185 15 188 1.11e-20 88.6
MS.gene032313.t1 AT1G02250 33.721 172 98 5 12 176 1 163 4.79e-20 90.1
MS.gene032313.t1 AT3G10490 48.750 80 40 1 87 166 2 80 1.87e-19 88.2
MS.gene032313.t1 AT3G10490 48.750 80 40 1 87 166 2 80 1.87e-19 88.2
MS.gene032313.t1 AT3G56530 34.194 155 95 4 11 162 49 199 4.49e-19 86.7
MS.gene032313.t1 AT1G01010 33.125 160 86 6 17 164 6 156 3.81e-17 82.0
MS.gene032313.t1 AT5G14000 31.288 163 101 4 12 171 13 167 3.89e-17 79.0
MS.gene032313.t1 AT2G18060 37.383 107 62 2 92 197 2 104 7.17e-17 79.7
MS.gene032313.t1 AT5G14000 34.286 140 86 3 12 147 13 150 9.44e-17 76.6
MS.gene032313.t1 AT3G55210 31.707 164 90 5 14 162 11 167 9.71e-17 79.3
MS.gene032313.t1 AT5G22290 36.752 117 57 4 93 200 2 110 4.52e-14 71.2
MS.gene032313.t1 AT4G29230 30.921 152 80 4 12 139 45 195 1.24e-12 68.9
MS.gene032313.t1 AT3G04430 35.606 132 71 5 20 138 6 136 2.23e-12 65.5
MS.gene032313.t1 AT5G56620 33.974 156 73 8 12 139 41 194 4.36e-12 67.0
MS.gene032313.t1 AT5G56620 33.974 156 73 8 12 139 41 194 5.49e-12 66.6
MS.gene032313.t1 AT1G28470 31.944 144 79 6 13 139 76 217 8.21e-12 65.5
MS.gene032313.t1 AT4G28500 36.806 144 71 7 14 139 59 200 1.04e-11 65.1
MS.gene032313.t1 AT5G56620 33.974 156 73 8 12 139 41 194 1.08e-11 65.9

Find 93 sgRNAs with CRISPR-Local

Find 117 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCATTTGGGTTTGGGTATT+CGG 0.141255 8.2:+47948994 MS.gene032313:CDS
CTCTTCGTCAGTGGGGTTCT+TGG 0.206001 8.2:-47948882 None:intergenic
GAGTTGCTGGTTCTGGTTAC+TGG 0.209450 8.2:+47948209 MS.gene032313:CDS
TTGGGTGACCCATTTGGGTT+TGG 0.232329 8.2:+47948986 MS.gene032313:CDS
GGTGCAGGCAAGGCGAATTT+TGG 0.246467 8.2:+47948121 MS.gene032313:intron
TGGGTGACCCATTTGGGTTT+GGG 0.283899 8.2:+47948987 MS.gene032313:CDS
AGAACCATTGCTGCATTCTT+TGG 0.294749 8.2:-47948564 None:intergenic
TCGGGCTTGGGTGACCCATT+TGG 0.306880 8.2:+47948980 MS.gene032313:CDS
TTTGATCCTTGGGTTCTTCC+AGG 0.310994 8.2:+47947794 MS.gene032313:CDS
CGGGCTTGGGTGACCCATTT+GGG 0.318140 8.2:+47948981 MS.gene032313:CDS
CTTGTACAAGTTTGATCCTT+GGG 0.318790 8.2:+47947784 MS.gene032313:CDS
ATTGAATCCTCACCGGAGTT+TGG 0.319990 8.2:+47948761 MS.gene032313:CDS
CCAAACAGAGTTGCTGGTTC+TGG 0.323652 8.2:+47948202 MS.gene032313:CDS
CCATTTGGGTTTGGGTATTC+GGG 0.326537 8.2:+47948995 MS.gene032313:CDS
AAGTCAATTTCAGCAATAAT+TGG 0.338246 8.2:-47947764 None:intergenic
CGAAATGTTGGACTCGTTCC+TGG 0.353931 8.2:+47948613 MS.gene032313:CDS
CTGTTTGGTCTAGAACCATT+TGG 0.354289 8.2:-47948187 None:intergenic
AGCTTTGATCATCAATTTCC+AGG 0.354718 8.2:-47948631 None:intergenic
TTATGTTGATATAAACTAGA+AGG 0.363334 8.2:-47948941 None:intergenic
TATCTATGTCGTAAAGTTGC+AGG 0.400628 8.2:+47947725 MS.gene032313:CDS
CATTCTTTGGTTGAAAATGT+TGG 0.404347 8.2:-47948551 None:intergenic
TTTGGATATTTCCTGTCCCT+TGG 0.404470 8.2:-47948169 None:intergenic
TCTCCTCTTGCTGTAGCATT+CGG 0.405277 8.2:-47948679 None:intergenic
AAAGCGGAATGAGGACTAAC+CGG 0.407018 8.2:+47948909 MS.gene032313:CDS
CTTTGAACCTCTTCGTCAGT+GGG 0.407280 8.2:-47948890 None:intergenic
TCCTCACCGGAGTTTGGATT+AGG 0.414541 8.2:+47948767 MS.gene032313:CDS
CCCGAATACCCAAACCCAAA+TGG 0.416032 8.2:-47948995 None:intergenic
CGTGCCACCGTTTGGTAACA+TGG 0.418390 8.2:+47948844 MS.gene032313:CDS
CCAGAACCAGCAACTCTGTT+TGG 0.423168 8.2:-47948202 None:intergenic
TCTAGACCAAACAGAGTTGC+TGG 0.423965 8.2:+47948196 MS.gene032313:CDS
ATTGATGCAGCTTGATGATT+GGG 0.428244 8.2:+47948481 MS.gene032313:intron
TATTGATGCAGCTTGATGAT+TGG 0.443903 8.2:+47948480 MS.gene032313:intron
TGGATTAGGAAACCAGAGTC+AGG 0.444473 8.2:+47948781 MS.gene032313:CDS
ACTTGTACAAGTTTGATCCT+TGG 0.451700 8.2:+47947783 MS.gene032313:CDS
CTACAGCAAGAGGAGAAGTT+CGG 0.456841 8.2:+47948686 MS.gene032313:CDS
TACAGCAAGAGGAGAAGTTC+GGG 0.459516 8.2:+47948687 MS.gene032313:CDS
GTTCCTTCCGTGCCACCGTT+TGG 0.466910 8.2:+47948836 MS.gene032313:CDS
AACAAGAAGCTCTTCATCAG+TGG 0.469107 8.2:-47947699 None:intergenic
CCGAATACCCAAACCCAAAT+GGG 0.471769 8.2:-47948994 None:intergenic
GGGTTTCACAACATGGGTGC+TGG 0.473359 8.2:+47948707 MS.gene032313:CDS
ACAACTGAAGGTAGAAAAGT+TGG 0.474990 8.2:+47948259 MS.gene032313:CDS
TTCGCCTTCATCGTCGTCCC+AGG 0.477914 8.2:+47948586 MS.gene032313:CDS
TGTGAAAGAGGATCTCTCTC+TGG 0.490458 8.2:-47947644 None:intergenic
AACTAGAAGGGTCGGTGACC+CGG 0.495029 8.2:-47948928 None:intergenic
AGTCAGGGGATGCTGAATTA+CGG 0.495349 8.2:+47948797 MS.gene032313:CDS
GCTTCGCGAAAACACAATCT+TGG 0.501596 8.2:+47948370 MS.gene032313:CDS
GAAGTTCGGGTTTCACAACA+TGG 0.506769 8.2:+47948700 MS.gene032313:CDS
TATATTGGCAAAGCACCAAA+AGG 0.512258 8.2:+47948304 MS.gene032313:CDS
GGTAAACTCAACTGTGAAAG+AGG 0.512342 8.2:-47947656 None:intergenic
ATTTCTTCAGTCCAAGGGAC+AGG 0.517559 8.2:+47948158 MS.gene032313:CDS
AATTCAGCATCCCCTGACTC+TGG 0.524401 8.2:-47948793 None:intergenic
GACAAAATTATCACAACTGA+AGG 0.526909 8.2:+47948247 MS.gene032313:CDS
GCTTTGAACCTCTTCGTCAG+TGG 0.531257 8.2:-47948891 None:intergenic
AGTCCAACATTTCGTCCACC+TGG 0.531736 8.2:-47948604 None:intergenic
TCAACCAAAGAATGCAGCAA+TGG 0.536044 8.2:+47948560 MS.gene032313:CDS
GTGAGGATTCAATATCTGTC+GGG 0.549879 8.2:-47948751 None:intergenic
ATCAAAGCTTTGCATTGCCG+CGG 0.551128 8.2:+47948645 MS.gene032313:CDS
ACAAGAAGCTCTTCATCAGT+GGG 0.551403 8.2:-47947698 None:intergenic
GTCCCAGGTGGACGAAATGT+TGG 0.553604 8.2:+47948601 MS.gene032313:CDS
AAGAGGTTCAAAGCGGAATG+AGG 0.554588 8.2:+47948900 MS.gene032313:CDS
AATGGTATTTCTTCAGTCCA+AGG 0.554883 8.2:+47948152 MS.gene032313:CDS
GACAAGTCCATGTTACCAAA+CGG 0.557895 8.2:-47948851 None:intergenic
TTGATATAAACTAGAAGGGT+CGG 0.560325 8.2:-47948936 None:intergenic
TCCACCTGGGACGACGATGA+AGG 0.560826 8.2:-47948590 None:intergenic
GGTGAGGATTCAATATCTGT+CGG 0.563156 8.2:-47948752 None:intergenic
TATGTTGATATAAACTAGAA+GGG 0.564471 8.2:-47948940 None:intergenic
AAGCGGAATGAGGACTAACC+GGG 0.566841 8.2:+47948910 MS.gene032313:CDS
ACTCCGAATGCTACAGCAAG+AGG 0.568493 8.2:+47948676 MS.gene032313:CDS
TCAAAGCTTTGCATTGCCGC+GGG 0.571006 8.2:+47948646 MS.gene032313:CDS
TTACCAAACGGTGGCACGGA+AGG 0.576728 8.2:-47948839 None:intergenic
GGATTAGGAAACCAGAGTCA+GGG 0.583546 8.2:+47948782 MS.gene032313:CDS
CAAGAACCCCACTGACGAAG+AGG 0.586015 8.2:+47948883 MS.gene032313:CDS
ATGGTATTTCTTCAGTCCAA+GGG 0.588129 8.2:+47948153 MS.gene032313:CDS
AGGGACAGGAAATATCCAAA+TGG 0.592563 8.2:+47948172 MS.gene032313:CDS
TCTGGTTACTGGAAAGCCAC+AGG 0.607999 8.2:+47948220 MS.gene032313:CDS
GCCTTCATCGTCGTCCCAGG+TGG 0.609301 8.2:+47948589 MS.gene032313:CDS
CATGTTACCAAACGGTGGCA+CGG 0.615690 8.2:-47948843 None:intergenic
TGGTAACATGGACTTGTCAG+CGG 0.622784 8.2:+47948856 MS.gene032313:CDS
GTCCAACATTTCGTCCACCT+GGG 0.623948 8.2:-47948603 None:intergenic
TAATTACCTGGAAGAACCCA+AGG 0.624355 8.2:-47947800 None:intergenic
GACAGATATTGAATCCTCAC+CGG 0.626126 8.2:+47948754 MS.gene032313:CDS
GATTAGGAAACCAGAGTCAG+GGG 0.641898 8.2:+47948783 MS.gene032313:CDS
GTGGGGAAGAATCTGAAACC+AGG 0.652605 8.2:-47947680 None:intergenic
TTTGAACCTCTTCGTCAGTG+GGG 0.654075 8.2:-47948889 None:intergenic
TCACAGTTGAGTTTACCACC+TGG 0.654718 8.2:+47947662 MS.gene032313:CDS
TGGTTTCCTAATCCAAACTC+CGG 0.659176 8.2:-47948773 None:intergenic
TCCTAATCCAAACTCCGGTG+AGG 0.662436 8.2:-47948768 None:intergenic
AAGTTCGGGTTTCACAACAT+GGG 0.678618 8.2:+47948701 MS.gene032313:CDS
ATTCGGAGTGATGTTACCCG+CGG 0.710388 8.2:-47948662 None:intergenic
AAGTCCATGTTACCAAACGG+TGG 0.727825 8.2:-47948848 None:intergenic
CAAGAAGCTCTTCATCAGTG+GGG 0.738513 8.2:-47947697 None:intergenic
GGGAAGAATCTGAAACCAGG+TGG 0.741808 8.2:-47947677 None:intergenic
ACTGACGAAGAGGTTCAAAG+CGG 0.781762 8.2:+47948893 MS.gene032313:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAATAATGTATTTTTATC+GGG + chr8.2:47948962-47948981 MS.gene032313:CDS 10.0%
!!! CAATTTTAATATTGTTGTTA+TGG + chr8.2:47948094-47948113 MS.gene032313:intron 15.0%
!! TATGTTGATATAAACTAGAA+GGG - chr8.2:47948943-47948962 None:intergenic 20.0%
!! TTATGTTGATATAAACTAGA+AGG - chr8.2:47948944-47948963 None:intergenic 20.0%
!!! TAATATTGTTGTTATGGTTT+TGG + chr8.2:47948100-47948119 MS.gene032313:intron 20.0%
! AAGTCAATTTCAGCAATAAT+TGG - chr8.2:47947767-47947786 None:intergenic 25.0%
! CAAAAGGAACAAAAACTAAT+TGG + chr8.2:47948320-47948339 MS.gene032313:CDS 25.0%
! CTGAAATTCTGACAATAATA+CGG + chr8.2:47947981-47948000 MS.gene032313:intron 25.0%
!!! AAAGCACTTGTTTTCTATAT+TGG + chr8.2:47948289-47948308 MS.gene032313:CDS 25.0%
!!! CAATTAGTTTTTGTTCCTTT+TGG - chr8.2:47948322-47948341 None:intergenic 25.0%
CAGGTAATTATCACCAATTT+AGG + chr8.2:47947813-47947832 MS.gene032313:intron 30.0%
CATTCTTTGGTTGAAAATGT+TGG - chr8.2:47948554-47948573 None:intergenic 30.0%
CTCATCAATAAAAATGAGCA+AGG - chr8.2:47948432-47948451 None:intergenic 30.0%
GACAAAATTATCACAACTGA+AGG + chr8.2:47948247-47948266 MS.gene032313:CDS 30.0%
TAACTATTGCAAAATCACAG+TGG - chr8.2:47947928-47947947 None:intergenic 30.0%
TTGATATAAACTAGAAGGGT+CGG - chr8.2:47948939-47948958 None:intergenic 30.0%
! CTAAATTGGTGATAATTACC+TGG - chr8.2:47947815-47947834 None:intergenic 30.0%
!! AATGTATTTTTATCGGGCTT+GGG + chr8.2:47948968-47948987 MS.gene032313:CDS 30.0%
!! TAATGTATTTTTATCGGGCT+TGG + chr8.2:47948967-47948986 MS.gene032313:CDS 30.0%
AATGGTATTTCTTCAGTCCA+AGG + chr8.2:47948152-47948171 MS.gene032313:CDS 35.0%
ACAACTGAAGGTAGAAAAGT+TGG + chr8.2:47948259-47948278 MS.gene032313:CDS 35.0%
ACTTGTACAAGTTTGATCCT+TGG + chr8.2:47947783-47947802 MS.gene032313:CDS 35.0%
ATGGTATTTCTTCAGTCCAA+GGG + chr8.2:47948153-47948172 MS.gene032313:CDS 35.0%
CTTGTACAAGTTTGATCCTT+GGG + chr8.2:47947784-47947803 MS.gene032313:CDS 35.0%
TATCTATGTCGTAAAGTTGC+AGG + chr8.2:47947725-47947744 MS.gene032313:CDS 35.0%
TCTGCAATTGCAACCTAAAT+TGG - chr8.2:47947829-47947848 None:intergenic 35.0%
! AGCTTTGATCATCAATTTCC+AGG - chr8.2:47948634-47948653 None:intergenic 35.0%
! ATTGATGCAGCTTGATGATT+GGG + chr8.2:47948481-47948500 MS.gene032313:intron 35.0%
! GATAATTTTGTCTGTTCCTG+TGG - chr8.2:47948239-47948258 None:intergenic 35.0%
! TATATTGGCAAAGCACCAAA+AGG + chr8.2:47948304-47948323 MS.gene032313:CDS 35.0%
! TATTGATGCAGCTTGATGAT+TGG + chr8.2:47948480-47948499 MS.gene032313:intron 35.0%
!! CGAATTTTGGTGAGAAAGAA+TGG + chr8.2:47948134-47948153 MS.gene032313:CDS 35.0%
AACAAGAAGCTCTTCATCAG+TGG - chr8.2:47947702-47947721 None:intergenic 40.0%
ACAAGAAGCTCTTCATCAGT+GGG - chr8.2:47947701-47947720 None:intergenic 40.0%
AGAACCATTGCTGCATTCTT+TGG - chr8.2:47948567-47948586 None:intergenic 40.0%
AGGGACAGGAAATATCCAAA+TGG + chr8.2:47948172-47948191 MS.gene032313:CDS 40.0%
CCGTAAGTTTGTCAGAATCA+CGG + chr8.2:47947898-47947917 MS.gene032313:intron 40.0%
CCGTGATTCTGACAAACTTA+CGG - chr8.2:47947901-47947920 None:intergenic 40.0%
GAAAAACTCAAGCTCGCAAA+AGG + chr8.2:47948523-47948542 MS.gene032313:CDS 40.0%
GACAAGTCCATGTTACCAAA+CGG - chr8.2:47948854-47948873 None:intergenic 40.0%
GACAGATATTGAATCCTCAC+CGG + chr8.2:47948754-47948773 MS.gene032313:CDS 40.0%
GGTAAACTCAACTGTGAAAG+AGG - chr8.2:47947659-47947678 None:intergenic 40.0%
GGTGAGGATTCAATATCTGT+CGG - chr8.2:47948755-47948774 None:intergenic 40.0%
GTGAGGATTCAATATCTGTC+GGG - chr8.2:47948754-47948773 None:intergenic 40.0%
TAATTACCTGGAAGAACCCA+AGG - chr8.2:47947803-47947822 None:intergenic 40.0%
TCAACCAAAGAATGCAGCAA+TGG + chr8.2:47948560-47948579 MS.gene032313:CDS 40.0%
TGGTTTCCTAATCCAAACTC+CGG - chr8.2:47948776-47948795 None:intergenic 40.0%
TTTGGATATTTCCTGTCCCT+TGG - chr8.2:47948172-47948191 None:intergenic 40.0%
! AAGTTCGGGTTTCACAACAT+GGG + chr8.2:47948701-47948720 MS.gene032313:CDS 40.0%
! CTGTTTGGTCTAGAACCATT+TGG - chr8.2:47948190-47948209 None:intergenic 40.0%
! TGCTGGACTTTTCTCTGATT+GGG + chr8.2:47948724-47948743 MS.gene032313:CDS 40.0%
!!! TGTTGTTATGGTTTTGGTGC+AGG + chr8.2:47948106-47948125 MS.gene032313:intron 40.0%
AAAGCGGAATGAGGACTAAC+CGG + chr8.2:47948909-47948928 MS.gene032313:CDS 45.0%
AAGAGGTTCAAAGCGGAATG+AGG + chr8.2:47948900-47948919 MS.gene032313:CDS 45.0%
AAGTCCATGTTACCAAACGG+TGG - chr8.2:47948851-47948870 None:intergenic 45.0%
ACTGACGAAGAGGTTCAAAG+CGG + chr8.2:47948893-47948912 MS.gene032313:CDS 45.0%
AGTCAGGGGATGCTGAATTA+CGG + chr8.2:47948797-47948816 MS.gene032313:CDS 45.0%
ATCAAAGCTTTGCATTGCCG+CGG + chr8.2:47948645-47948664 MS.gene032313:CDS 45.0%
ATTGAATCCTCACCGGAGTT+TGG + chr8.2:47948761-47948780 MS.gene032313:CDS 45.0%
ATTTCTTCAGTCCAAGGGAC+AGG + chr8.2:47948158-47948177 MS.gene032313:CDS 45.0%
CAAGAAGCTCTTCATCAGTG+GGG - chr8.2:47947700-47947719 None:intergenic 45.0%
CCGAATACCCAAACCCAAAT+GGG - chr8.2:47948997-47949016 None:intergenic 45.0%
CTACAGCAAGAGGAGAAGTT+CGG + chr8.2:47948686-47948705 MS.gene032313:CDS 45.0%
CTTTGAACCTCTTCGTCAGT+GGG - chr8.2:47948893-47948912 None:intergenic 45.0%
GATTAGGAAACCAGAGTCAG+GGG + chr8.2:47948783-47948802 MS.gene032313:CDS 45.0%
GCTTCGCGAAAACACAATCT+TGG + chr8.2:47948370-47948389 MS.gene032313:CDS 45.0%
GGATTAGGAAACCAGAGTCA+GGG + chr8.2:47948782-47948801 MS.gene032313:CDS 45.0%
TACAGCAAGAGGAGAAGTTC+GGG + chr8.2:47948687-47948706 MS.gene032313:CDS 45.0%
TCACAGTTGAGTTTACCACC+TGG + chr8.2:47947662-47947681 MS.gene032313:CDS 45.0%
TCTAGACCAAACAGAGTTGC+TGG + chr8.2:47948196-47948215 MS.gene032313:CDS 45.0%
TGGTAACATGGACTTGTCAG+CGG + chr8.2:47948856-47948875 MS.gene032313:CDS 45.0%
TGTGAAAGAGGATCTCTCTC+TGG - chr8.2:47947647-47947666 None:intergenic 45.0%
TTTGAACCTCTTCGTCAGTG+GGG - chr8.2:47948892-47948911 None:intergenic 45.0%
TTTGATCCTTGGGTTCTTCC+AGG + chr8.2:47947794-47947813 MS.gene032313:CDS 45.0%
! CCATTTGGGTTTGGGTATTC+GGG + chr8.2:47948995-47949014 MS.gene032313:CDS 45.0%
! CCCATTTGGGTTTGGGTATT+CGG + chr8.2:47948994-47949013 MS.gene032313:CDS 45.0%
! GAAGTTCGGGTTTCACAACA+TGG + chr8.2:47948700-47948719 MS.gene032313:CDS 45.0%
! GTGCTGGACTTTTCTCTGAT+TGG + chr8.2:47948723-47948742 MS.gene032313:CDS 45.0%
! TCTCCTCTTGCTGTAGCATT+CGG - chr8.2:47948682-47948701 None:intergenic 45.0%
! TGGATTAGGAAACCAGAGTC+AGG + chr8.2:47948781-47948800 MS.gene032313:CDS 45.0%
!!! TTATGGTTTTGGTGCAGGCA+AGG + chr8.2:47948111-47948130 MS.gene032313:intron 45.0%
!!! TAATAATAATGTATTTTTAT+CGG + chr8.2:47948961-47948980 MS.gene032313:CDS 5.0%
AAGCGGAATGAGGACTAACC+GGG + chr8.2:47948910-47948929 MS.gene032313:CDS 50.0%
AATTCAGCATCCCCTGACTC+TGG - chr8.2:47948796-47948815 None:intergenic 50.0%
ACTCCGAATGCTACAGCAAG+AGG + chr8.2:47948676-47948695 MS.gene032313:CDS 50.0%
AGTCCAACATTTCGTCCACC+TGG - chr8.2:47948607-47948626 None:intergenic 50.0%
ATTCGGAGTGATGTTACCCG+CGG - chr8.2:47948665-47948684 None:intergenic 50.0%
CATGTTACCAAACGGTGGCA+CGG - chr8.2:47948846-47948865 None:intergenic 50.0%
CCAGAACCAGCAACTCTGTT+TGG - chr8.2:47948205-47948224 None:intergenic 50.0%
CCCGAATACCCAAACCCAAA+TGG - chr8.2:47948998-47949017 None:intergenic 50.0%
CGAAATGTTGGACTCGTTCC+TGG + chr8.2:47948613-47948632 MS.gene032313:CDS 50.0%
GTCCAACATTTCGTCCACCT+GGG - chr8.2:47948606-47948625 None:intergenic 50.0%
TCAAAGCTTTGCATTGCCGC+GGG + chr8.2:47948646-47948665 MS.gene032313:CDS 50.0%
TCCTAATCCAAACTCCGGTG+AGG - chr8.2:47948771-47948790 None:intergenic 50.0%
TCCTCACCGGAGTTTGGATT+AGG + chr8.2:47948767-47948786 MS.gene032313:CDS 50.0%
TCTGGTTACTGGAAAGCCAC+AGG + chr8.2:47948220-47948239 MS.gene032313:CDS 50.0%
! GCTTTGAACCTCTTCGTCAG+TGG - chr8.2:47948894-47948913 None:intergenic 50.0%
! GGGAAGAATCTGAAACCAGG+TGG - chr8.2:47947680-47947699 None:intergenic 50.0%
! GTGGGGAAGAATCTGAAACC+AGG - chr8.2:47947683-47947702 None:intergenic 50.0%
! TGGGTGACCCATTTGGGTTT+GGG + chr8.2:47948987-47949006 MS.gene032313:CDS 50.0%
! TTGGGTGACCCATTTGGGTT+TGG + chr8.2:47948986-47949005 MS.gene032313:CDS 50.0%
!! CCAAACAGAGTTGCTGGTTC+TGG + chr8.2:47948202-47948221 MS.gene032313:CDS 50.0%
!! GAGTTGCTGGTTCTGGTTAC+TGG + chr8.2:47948209-47948228 MS.gene032313:CDS 50.0%
AACTAGAAGGGTCGGTGACC+CGG - chr8.2:47948931-47948950 None:intergenic 55.0%
CAAGAACCCCACTGACGAAG+AGG + chr8.2:47948883-47948902 MS.gene032313:CDS 55.0%
CTCTTCGTCAGTGGGGTTCT+TGG - chr8.2:47948885-47948904 None:intergenic 55.0%
GGGTTTCACAACATGGGTGC+TGG + chr8.2:47948707-47948726 MS.gene032313:CDS 55.0%
GTCCCAGGTGGACGAAATGT+TGG + chr8.2:47948601-47948620 MS.gene032313:CDS 55.0%
TTACCAAACGGTGGCACGGA+AGG - chr8.2:47948842-47948861 None:intergenic 55.0%
! CGTGCCACCGTTTGGTAACA+TGG + chr8.2:47948844-47948863 MS.gene032313:CDS 55.0%
! GGTGCAGGCAAGGCGAATTT+TGG + chr8.2:47948121-47948140 MS.gene032313:intron 55.0%
CGGGCTTGGGTGACCCATTT+GGG + chr8.2:47948981-47949000 MS.gene032313:CDS 60.0%
GTTCCTTCCGTGCCACCGTT+TGG + chr8.2:47948836-47948855 MS.gene032313:CDS 60.0%
TCCACCTGGGACGACGATGA+AGG - chr8.2:47948593-47948612 None:intergenic 60.0%
TCGGGCTTGGGTGACCCATT+TGG + chr8.2:47948980-47948999 MS.gene032313:CDS 60.0%
TTCGCCTTCATCGTCGTCCC+AGG + chr8.2:47948586-47948605 MS.gene032313:CDS 60.0%
GCCTTCATCGTCGTCCCAGG+TGG + chr8.2:47948589-47948608 MS.gene032313:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 47947635 47949024 47947635 ID=MS.gene032313
chr8.2 mRNA 47947635 47949024 47947635 ID=MS.gene032313.t1;Parent=MS.gene032313
chr8.2 exon 47947635 47947815 47947635 ID=MS.gene032313.t1.exon1;Parent=MS.gene032313.t1
chr8.2 CDS 47947635 47947815 47947635 ID=cds.MS.gene032313.t1;Parent=MS.gene032313.t1
chr8.2 exon 47948128 47948402 47948128 ID=MS.gene032313.t1.exon2;Parent=MS.gene032313.t1
chr8.2 CDS 47948128 47948402 47948128 ID=cds.MS.gene032313.t1;Parent=MS.gene032313.t1
chr8.2 exon 47948491 47949024 47948491 ID=MS.gene032313.t1.exon3;Parent=MS.gene032313.t1
chr8.2 CDS 47948491 47949024 47948491 ID=cds.MS.gene032313.t1;Parent=MS.gene032313.t1
Gene Sequence

>MS.gene032313

ATGGGAGTTCCAGAGAGAGATCCTCTTTCACAGTTGAGTTTACCACCTGGTTTCAGATTCTTCCCCACTGATGAAGAGCTTCTTGTTCAGTATCTATGTCGTAAAGTTGCAGGACATCATTTTTCTTTGCCAATTATTGCTGAAATTGACTTGTACAAGTTTGATCCTTGGGTTCTTCCAGGTAATTATCACCAATTTAGGTTGCAATTGCAGAATTGTTCATGTCTTTAAATTTTAAAATATTAAATGTATGTTTGATATTTCCGTAAGTTTGTCAGAATCACGGTGAACCACTGTGATTTTGCAATAGTTACACTTTCAAGCTTGTAACTTTTGCAAGATCACACTGAAATTCTGACAATAATACGGTAATATGAAACATGCACTAAAATCACAACTATGTTAATACTGTTGCTAAATATTTTGTGTTGTTTATATTTAATTTGTTTAATTGAGATGCAATTTTAATATTGTTGTTATGGTTTTGGTGCAGGCAAGGCGAATTTTGGTGAGAAAGAATGGTATTTCTTCAGTCCAAGGGACAGGAAATATCCAAATGGTTCTAGACCAAACAGAGTTGCTGGTTCTGGTTACTGGAAAGCCACAGGAACAGACAAAATTATCACAACTGAAGGTAGAAAAGTTGGCATAAAAAAAGCACTTGTTTTCTATATTGGCAAAGCACCAAAAGGAACAAAAACTAATTGGATTATGCATGAGTATCGTCTTCTTGATGCTTCGCGAAAACACAATCTTGGTAGCTCAAAAGTAAGCAACACAATCGTATTATATTTCCTTGCTCATTTTTATTGATGAGAAAAGTAAAGAATCTAACTTATTTGATTTATTGATGCAGCTTGATGATTGGGTTTTGTGTCGAATATACAAGAAAAACTCAAGCTCGCAAAAGGAAATTCCAACATTTTCAACCAAAGAATGCAGCAATGGTTCTTCGCCTTCATCGTCGTCCCAGGTGGACGAAATGTTGGACTCGTTCCTGGAAATTGATGATCAAAGCTTTGCATTGCCGCGGGTAACATCACTCCGAATGCTACAGCAAGAGGAGAAGTTCGGGTTTCACAACATGGGTGCTGGACTTTTCTCTGATTGGGTTAACCCGACAGATATTGAATCCTCACCGGAGTTTGGATTAGGAAACCAGAGTCAGGGGATGCTGAATTACGGTTGTAATGACTATTGTGTTCCTTCCGTGCCACCGTTTGGTAACATGGACTTGTCAGCGGAGTCCAAGAACCCCACTGACGAAGAGGTTCAAAGCGGAATGAGGACTAACCGGGTCACCGACCCTTCTAGTTTATATCAACATAATAATAATGTATTTTTATCGGGCTTGGGTGACCCATTTGGGTTTGGGTATTCGGGTCATTAA
Protein sequence

>MS.gene032313.t1

MGVPERDPLSQLSLPPGFRFFPTDEELLVQYLCRKVAGHHFSLPIIAEIDLYKFDPWVLPGKANFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYIGKAPKGTKTNWIMHEYRLLDASRKHNLGSSKLDDWVLCRIYKKNSSSQKEIPTFSTKECSNGSSPSSSSQVDEMLDSFLEIDDQSFALPRVTSLRMLQQEEKFGFHNMGAGLFSDWVNPTDIESSPEFGLGNQSQGMLNYGCNDYCVPSVPPFGNMDLSAESKNPTDEEVQSGMRTNRVTDPSSLYQHNNNVFLSGLGDPFGFGYSGH