AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene032314

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032314.t1 MTR_8g059170 88.608 237 12 2 1 222 63 299 2.33e-147 413
MS.gene032314.t1 MTR_2g079990 58.800 250 72 8 1 222 65 311 2.54e-83 252
MS.gene032314.t1 MTR_2g079990 52.878 278 72 8 1 222 65 339 2.47e-79 243
MS.gene032314.t1 MTR_3g088110 71.818 110 25 2 1 105 56 164 1.31e-49 163
MS.gene032314.t1 MTR_2g080010 62.810 121 30 2 1 106 64 184 4.59e-48 161
MS.gene032314.t1 MTR_7g085220 56.944 144 34 4 1 129 57 187 9.93e-48 160
MS.gene032314.t1 MTR_8g094580 64.228 123 33 3 1 113 2 123 2.82e-47 155
MS.gene032314.t1 MTR_4g089135 58.824 136 29 3 1 109 64 199 4.11e-47 159
MS.gene032314.t1 MTR_8g094580 64.228 123 33 3 1 113 56 177 1.67e-46 155
MS.gene032314.t1 MTR_3g096920 71.429 105 24 2 5 104 60 163 1.00e-45 154
MS.gene032314.t1 MTR_2157s0010 67.257 113 23 3 1 99 57 169 2.13e-45 152
MS.gene032314.t1 MTR_4g081870 50.000 158 67 3 1 148 58 213 3.50e-45 152
MS.gene032314.t1 MTR_5g041940 49.359 156 69 3 1 148 52 205 8.18e-45 150
MS.gene032314.t1 MTR_2g093810 63.551 107 31 2 3 101 65 171 1.63e-42 146
MS.gene032314.t1 MTR_7g100990 56.204 137 46 4 1 129 60 190 1.12e-41 144
MS.gene032314.t1 MTR_3g096920 52.113 142 25 2 5 104 60 200 4.14e-39 137
MS.gene032314.t1 MTR_6g084430 56.731 104 45 0 1 104 54 157 6.65e-37 132
MS.gene032314.t1 MTR_6g012670 56.481 108 43 2 1 104 69 176 1.21e-35 128
MS.gene032314.t1 MTR_2g064090 52.727 110 45 2 7 113 63 168 1.83e-35 128
MS.gene032314.t1 MTR_6g477900 56.842 95 39 1 7 99 63 157 2.01e-35 125
MS.gene032314.t1 MTR_4g134460 60.606 99 38 1 1 98 103 201 2.77e-35 129
MS.gene032314.t1 MTR_2g062730 53.774 106 45 2 5 106 66 171 1.04e-34 126
MS.gene032314.t1 MTR_5g076850 58.163 98 39 1 5 100 61 158 1.36e-34 130
MS.gene032314.t1 MTR_3g109340 54.717 106 46 1 1 104 71 176 2.39e-34 125
MS.gene032314.t1 MTR_5g040420 53.782 119 42 5 1 106 63 181 7.24e-34 125
MS.gene032314.t1 MTR_3g109340 55.140 107 45 2 1 104 71 177 1.17e-33 124
MS.gene032314.t1 MTR_4g035590 58.511 94 38 1 5 98 64 156 1.68e-33 123
MS.gene032314.t1 MTR_4g108760 53.097 113 39 2 1 104 66 173 2.51e-33 123
MS.gene032314.t1 MTR_8g467490 52.500 120 43 6 1 106 63 182 4.51e-33 123
MS.gene032314.t1 MTR_6g011860 52.212 113 42 2 1 101 64 176 7.20e-33 122
MS.gene032314.t1 MTR_3g064580 57.732 97 38 1 7 100 63 159 8.15e-33 125
MS.gene032314.t1 MTR_6g032770 53.846 117 46 3 1 110 67 182 1.23e-32 121
MS.gene032314.t1 MTR_4g036030 39.264 163 86 4 5 157 63 222 1.40e-32 120
MS.gene032314.t1 MTR_1g096430 51.000 100 49 0 5 104 63 162 1.67e-32 120
MS.gene032314.t1 MTR_2g064470 46.457 127 55 2 1 119 58 179 1.93e-32 119
MS.gene032314.t1 MTR_3g435150 54.128 109 44 2 1 104 65 172 1.97e-32 119
MS.gene032314.t1 MTR_8g024480 49.524 105 42 1 5 98 71 175 2.67e-32 121
MS.gene032314.t1 MTR_1g008740 53.271 107 47 2 1 104 77 183 2.82e-32 120
MS.gene032314.t1 MTR_1g008740 53.271 107 47 2 1 104 63 169 3.07e-32 120
MS.gene032314.t1 MTR_4g075980 53.846 104 42 2 1 101 64 164 3.25e-32 119
MS.gene032314.t1 MTR_3g070030 50.893 112 49 2 1 106 68 179 3.65e-32 120
MS.gene032314.t1 MTR_7g085260 53.571 112 44 2 1 104 66 177 4.29e-32 120
MS.gene032314.t1 MTR_7g005280 50.000 128 57 4 5 129 65 188 4.86e-32 117
MS.gene032314.t1 MTR_2g068920 46.099 141 59 3 4 127 74 214 2.84e-31 116
MS.gene032314.t1 MTR_2g078700 54.128 109 40 3 1 101 72 178 5.62e-31 117
MS.gene032314.t1 MTR_4g101680 45.536 112 59 2 5 115 63 173 7.19e-31 116
MS.gene032314.t1 MTR_8g076110 34.359 195 120 3 2 189 59 252 9.30e-31 115
MS.gene032314.t1 MTR_7g011120 46.087 115 51 2 1 104 57 171 1.90e-30 114
MS.gene032314.t1 MTR_3g093040 40.845 142 76 2 7 146 165 300 2.88e-30 114
MS.gene032314.t1 MTR_3g093050 41.667 144 81 2 5 146 77 219 5.81e-30 116
MS.gene032314.t1 MTR_5g069030 54.082 98 43 1 7 102 82 179 7.30e-30 116
MS.gene032314.t1 MTR_3g093050 41.667 144 81 2 5 146 77 219 8.08e-30 116
MS.gene032314.t1 MTR_7g011130 44.628 121 50 2 1 104 68 188 1.93e-29 112
MS.gene032314.t1 MTR_5g021710 47.000 100 53 0 5 104 64 163 2.37e-29 112
MS.gene032314.t1 MTR_2g068880 50.000 120 43 3 4 106 75 194 4.26e-29 110
MS.gene032314.t1 MTR_8g063550 47.423 97 49 1 4 98 60 156 2.52e-28 109
MS.gene032314.t1 MTR_8g063550 47.423 97 49 1 4 98 60 156 4.53e-28 110
MS.gene032314.t1 MTR_8g063550 47.423 97 49 1 4 98 60 156 4.93e-28 110
MS.gene032314.t1 MTR_0036s0150 49.495 99 49 1 7 104 63 161 8.45e-28 110
MS.gene032314.t1 MTR_5g014300 50.980 102 42 2 5 99 61 161 1.10e-27 107
MS.gene032314.t1 MTR_5g090970 43.704 135 62 2 4 124 70 204 1.43e-27 107
MS.gene032314.t1 MTR_5g090970 43.704 135 62 2 4 124 69 203 1.48e-27 107
MS.gene032314.t1 MTR_1g069805 43.511 131 68 3 1 129 59 185 2.50e-27 105
MS.gene032314.t1 MTR_1g097300 47.423 97 49 1 4 98 73 169 2.72e-27 108
MS.gene032314.t1 MTR_5g012080 50.000 96 46 2 5 98 63 158 3.29e-27 106
MS.gene032314.t1 MTR_3g116070 59.494 79 30 1 1 77 73 151 8.19e-27 105
MS.gene032314.t1 MTR_7g097090 50.505 99 45 2 1 97 59 155 1.37e-26 103
MS.gene032314.t1 MTR_1g090723 47.000 100 51 1 7 104 66 165 1.72e-26 107
MS.gene032314.t1 MTR_1g090723 47.475 99 51 1 7 104 66 164 3.25e-26 106
MS.gene032314.t1 MTR_1g090723 47.475 99 51 1 7 104 66 164 3.37e-26 105
MS.gene032314.t1 MTR_3g096140 46.392 97 50 1 4 98 61 157 3.48e-26 102
MS.gene032314.t1 MTR_2g086880 42.520 127 57 4 5 131 72 182 4.60e-26 105
MS.gene032314.t1 MTR_2g086880 42.520 127 57 4 5 131 72 182 6.69e-26 105
MS.gene032314.t1 MTR_3g096140 46.392 97 50 1 4 98 40 136 6.79e-26 102
MS.gene032314.t1 MTR_3g096140 46.392 97 50 1 4 98 61 157 8.29e-26 103
MS.gene032314.t1 MTR_4g098630 48.544 103 48 2 7 104 63 165 1.22e-25 102
MS.gene032314.t1 MTR_8g093580 43.878 98 51 2 4 98 60 156 6.19e-25 102
MS.gene032314.t1 MTR_1g090720 47.115 104 47 1 5 100 97 200 6.79e-25 102
MS.gene032314.t1 MTR_3g070040 47.000 100 41 2 15 105 68 164 1.86e-24 99.0
MS.gene032314.t1 MTR_3g098810 44.737 114 51 2 1 102 61 174 3.59e-23 94.0
MS.gene032314.t1 MTR_2g086690 46.392 97 46 2 6 96 64 160 4.24e-23 94.0
MS.gene032314.t1 MTR_7g070140 54.217 83 36 2 5 85 17 99 5.32e-23 90.5
MS.gene032314.t1 MTR_8g099750 45.000 100 46 3 5 95 65 164 8.68e-22 89.7
MS.gene032314.t1 MTR_4g052620 42.857 98 50 2 5 96 63 160 2.68e-21 89.4
MS.gene032314.t1 MTR_7g105170 40.196 102 53 3 6 99 64 165 4.42e-21 88.6
MS.gene032314.t1 MTR_8g023840 49.451 91 40 3 7 95 69 155 3.73e-20 88.2
MS.gene032314.t1 MTR_3g098810 52.439 82 35 1 1 78 61 142 4.61e-20 84.0
MS.gene032314.t1 MTR_8g023900 38.400 125 63 5 5 124 249 364 1.49e-17 80.9
MS.gene032314.t1 MTR_8g023900 37.624 101 49 4 5 98 68 161 2.87e-14 71.2
MS.gene032314.t1 MTR_8g023860 42.553 94 42 4 7 95 70 156 4.37e-17 79.3
MS.gene032314.t1 MTR_8g023930 37.097 124 66 5 5 124 80 195 9.24e-17 78.6
MS.gene032314.t1 MTR_4g094302 35.514 107 51 3 7 103 66 164 2.09e-16 74.7
MS.gene032314.t1 MTR_7g070150 47.826 69 27 2 49 109 9 76 4.57e-15 68.6
MS.gene032314.t1 MTR_4g094302 42.466 73 32 2 7 77 66 130 1.34e-13 66.6
MS.gene032314.t1 MTR_8g023880 38.182 110 44 5 5 98 63 164 2.04e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032314.t1 AT1G52890 54.930 213 68 7 1 186 63 274 3.54e-64 202
MS.gene032314.t1 AT4G27410 53.191 235 71 8 1 218 63 275 5.23e-64 201
MS.gene032314.t1 AT4G27410 53.191 235 71 8 1 218 80 292 1.42e-63 200
MS.gene032314.t1 AT3G15500 55.446 202 62 4 1 176 63 262 5.68e-62 196
MS.gene032314.t1 AT1G01720 46.262 214 75 8 1 187 56 256 4.23e-50 165
MS.gene032314.t1 AT1G61110 62.500 128 33 2 1 113 65 192 2.23e-48 161
MS.gene032314.t1 AT5G08790 61.719 128 41 2 3 123 58 184 2.60e-48 160
MS.gene032314.t1 AT5G63790 61.240 129 42 2 1 122 99 226 3.45e-47 158
MS.gene032314.t1 AT5G63790 61.240 129 42 2 1 122 109 236 3.89e-47 158
MS.gene032314.t1 AT3G15510 63.559 118 28 3 1 103 66 183 6.98e-47 159
MS.gene032314.t1 AT3G04070 41.870 246 106 9 1 222 59 291 8.61e-47 158
MS.gene032314.t1 AT1G77450 69.725 109 27 2 1 104 59 166 1.72e-46 154
MS.gene032314.t1 AT3G04070 40.076 262 104 10 1 222 59 307 2.15e-45 154
MS.gene032314.t1 AT1G69490 65.421 107 31 1 3 103 60 166 4.34e-45 151
MS.gene032314.t1 AT1G52880 66.379 116 25 3 1 102 66 181 9.76e-42 144
MS.gene032314.t1 AT2G02450 53.600 125 55 3 1 122 100 224 1.07e-36 132
MS.gene032314.t1 AT2G02450 53.600 125 55 3 1 122 100 224 1.11e-36 133
MS.gene032314.t1 AT3G18400 46.154 143 71 2 1 137 54 196 2.28e-36 130
MS.gene032314.t1 AT3G12977 48.800 125 57 4 1 121 14 135 6.70e-35 124
MS.gene032314.t1 AT3G17730 46.825 126 60 3 7 129 63 184 7.29e-35 124
MS.gene032314.t1 AT2G24430 55.963 109 45 2 1 106 65 173 9.28e-35 126
MS.gene032314.t1 AT2G24430 55.963 109 45 2 1 106 65 173 9.28e-35 126
MS.gene032314.t1 AT2G33480 57.143 98 42 0 5 102 65 162 2.26e-34 124
MS.gene032314.t1 AT5G61430 55.263 114 46 3 1 110 2 114 2.89e-34 123
MS.gene032314.t1 AT3G04060 47.651 149 68 4 1 143 69 213 4.25e-34 124
MS.gene032314.t1 AT3G12977 48.800 125 57 4 1 121 67 188 7.41e-34 122
MS.gene032314.t1 AT2G33480 56.000 100 42 1 5 102 8 107 8.67e-34 120
MS.gene032314.t1 AT5G18270 43.590 156 81 3 1 149 70 225 9.03e-34 124
MS.gene032314.t1 AT5G18270 43.590 156 81 3 1 149 70 225 9.62e-34 124
MS.gene032314.t1 AT5G61430 55.263 114 46 3 1 110 65 177 1.62e-33 123
MS.gene032314.t1 AT1G65910 54.000 100 44 1 7 104 63 162 1.80e-33 127
MS.gene032314.t1 AT1G33280 57.447 94 39 1 5 98 64 156 1.98e-33 122
MS.gene032314.t1 AT5G39820 48.507 134 42 4 1 107 69 202 2.22e-33 122
MS.gene032314.t1 AT5G07680 55.046 109 43 2 1 104 52 159 2.73e-33 122
MS.gene032314.t1 AT4G10350 56.250 96 40 1 5 98 18 113 2.76e-33 121
MS.gene032314.t1 AT5G07680 55.046 109 43 2 1 104 66 173 3.19e-33 122
MS.gene032314.t1 AT1G56010 52.381 105 45 2 1 100 2 106 3.35e-33 120
MS.gene032314.t1 AT5G39610 42.135 178 79 5 1 159 69 241 3.40e-33 121
MS.gene032314.t1 AT5G62380 43.537 147 70 3 5 142 63 205 3.92e-33 122
MS.gene032314.t1 AT5G62380 43.537 147 70 3 5 142 63 205 3.92e-33 122
MS.gene032314.t1 AT1G79580 57.895 95 38 2 5 98 73 166 5.48e-33 122
MS.gene032314.t1 AT1G79580 57.895 95 38 2 5 98 73 166 5.48e-33 122
MS.gene032314.t1 AT1G79580 57.895 95 38 2 5 98 73 166 5.48e-33 122
MS.gene032314.t1 AT1G79580 57.895 95 38 2 5 98 73 166 5.48e-33 122
MS.gene032314.t1 AT1G79580 57.895 95 38 2 5 98 73 166 5.48e-33 122
MS.gene032314.t1 AT1G26870 53.571 112 39 3 4 102 68 179 8.18e-33 122
MS.gene032314.t1 AT2G33480 56.000 100 42 1 5 102 65 164 8.69e-33 119
MS.gene032314.t1 AT4G10350 56.250 96 40 1 5 98 65 160 1.07e-32 121
MS.gene032314.t1 AT1G76420 55.446 101 42 2 1 98 71 171 1.32e-32 120
MS.gene032314.t1 AT1G56010 52.381 105 45 2 1 100 69 173 1.79e-32 120
MS.gene032314.t1 AT1G71930 46.078 102 55 0 5 106 65 166 1.06e-31 118
MS.gene032314.t1 AT1G71930 46.078 102 55 0 5 106 65 166 1.06e-31 118
MS.gene032314.t1 AT2G46770 43.662 142 57 4 5 126 72 210 1.08e-31 119
MS.gene032314.t1 AT2G17040 46.617 133 58 4 1 125 55 182 1.74e-31 116
MS.gene032314.t1 AT1G62700 51.546 97 47 0 2 98 60 156 2.30e-31 118
MS.gene032314.t1 AT1G62700 51.546 97 47 0 2 98 60 156 2.30e-31 118
MS.gene032314.t1 AT5G13180 56.311 103 42 3 5 104 64 166 2.71e-31 115
MS.gene032314.t1 AT2G43000 51.887 106 48 1 1 103 67 172 3.18e-31 115
MS.gene032314.t1 AT5G53950 45.652 138 63 3 1 126 66 203 4.80e-31 117
MS.gene032314.t1 AT3G10480 53.061 98 44 1 5 100 82 179 4.84e-31 118
MS.gene032314.t1 AT3G03200 53.608 97 42 1 5 98 61 157 5.25e-31 119
MS.gene032314.t1 AT4G35580 57.447 94 38 1 7 98 66 159 8.86e-31 118
MS.gene032314.t1 AT4G35580 57.447 94 38 1 7 98 66 159 9.47e-31 118
MS.gene032314.t1 AT5G17260 52.577 97 43 1 5 98 61 157 9.66e-31 118
MS.gene032314.t1 AT4G35580 57.447 94 38 1 7 98 66 159 1.21e-30 118
MS.gene032314.t1 AT3G10480 51.515 99 45 1 5 100 82 180 1.53e-30 117
MS.gene032314.t1 AT1G12260 44.860 107 59 0 5 111 63 169 2.69e-30 114
MS.gene032314.t1 AT1G33060 40.667 150 80 3 5 152 79 221 3.38e-30 117
MS.gene032314.t1 AT3G29035 52.727 110 46 2 1 105 73 181 3.41e-30 114
MS.gene032314.t1 AT3G10480 51.515 99 45 1 5 100 115 213 3.59e-30 117
MS.gene032314.t1 AT1G12260 44.860 107 59 0 5 111 63 169 3.63e-30 115
MS.gene032314.t1 AT1G33060 40.667 150 80 3 5 152 79 221 3.69e-30 117
MS.gene032314.t1 AT2G18060 43.089 123 69 1 5 126 65 187 4.90e-30 114
MS.gene032314.t1 AT2G18060 43.089 123 69 1 5 126 65 187 4.90e-30 114
MS.gene032314.t1 AT3G15170 50.893 112 47 3 1 105 69 179 8.30e-30 112
MS.gene032314.t1 AT1G32770 47.170 106 44 2 5 98 72 177 8.81e-30 114
MS.gene032314.t1 AT1G54330 54.737 95 42 1 5 99 61 154 1.80e-29 112
MS.gene032314.t1 AT5G66300 47.619 105 50 2 5 108 68 168 1.85e-29 111
MS.gene032314.t1 AT4G36160 52.174 92 44 0 7 98 68 159 2.02e-29 113
MS.gene032314.t1 AT4G36160 52.174 92 44 0 7 98 68 159 2.02e-29 113
MS.gene032314.t1 AT4G36160 52.174 92 44 0 7 98 72 163 2.35e-29 113
MS.gene032314.t1 AT3G61910 41.791 134 53 3 5 123 67 190 2.38e-29 112
MS.gene032314.t1 AT3G12910 47.692 130 49 4 5 117 75 202 3.58e-29 111
MS.gene032314.t1 AT5G24590 44.615 130 65 3 5 129 68 195 9.38e-29 112
MS.gene032314.t1 AT3G10490 48.485 99 48 1 5 100 82 180 9.49e-29 108
MS.gene032314.t1 AT3G10500 51.000 100 47 1 7 104 66 165 1.02e-28 113
MS.gene032314.t1 AT4G17980 52.525 99 41 2 7 99 63 161 2.47e-28 107
MS.gene032314.t1 AT3G10490 50.505 99 46 2 5 100 82 180 3.25e-28 110
MS.gene032314.t1 AT4G17980 52.525 99 41 2 7 99 63 161 3.65e-28 108
MS.gene032314.t1 AT4G28530 51.923 104 46 2 1 102 75 176 3.87e-28 109
MS.gene032314.t1 AT1G32510 45.690 116 53 2 5 110 61 176 9.83e-28 107
MS.gene032314.t1 AT1G34180 45.631 103 54 1 4 104 70 172 1.03e-27 109
MS.gene032314.t1 AT1G34180 45.631 103 54 1 4 104 82 184 1.16e-27 109
MS.gene032314.t1 AT5G04410 50.000 100 48 1 7 104 66 165 1.24e-27 110
MS.gene032314.t1 AT1G34180 45.631 103 54 1 4 104 70 172 2.00e-27 109
MS.gene032314.t1 AT1G34180 45.631 103 54 1 4 104 82 184 2.29e-27 109
MS.gene032314.t1 AT5G46590 53.465 101 39 3 5 99 61 159 2.84e-27 105
MS.gene032314.t1 AT1G34190 55.405 74 33 0 4 77 70 143 2.29e-26 106
MS.gene032314.t1 AT3G49530 49.485 97 46 2 5 98 68 164 1.62e-25 103
MS.gene032314.t1 AT3G49530 49.485 97 46 2 5 98 68 164 2.27e-25 103
MS.gene032314.t1 AT5G46590 59.211 76 30 1 5 79 61 136 3.35e-25 100
MS.gene032314.t1 AT2G43000 50.538 93 43 1 14 103 2 94 4.06e-25 97.8
MS.gene032314.t1 AT1G32870 49.038 104 47 2 5 104 65 166 1.44e-24 101
MS.gene032314.t1 AT1G32870 49.038 104 47 2 5 104 65 166 1.50e-24 101
MS.gene032314.t1 AT1G32870 49.038 104 47 2 5 104 101 202 1.87e-24 101
MS.gene032314.t1 AT5G64060 41.837 98 55 1 4 99 60 157 1.96e-24 99.4
MS.gene032314.t1 AT3G44350 47.059 102 50 3 6 103 64 165 3.75e-24 96.7
MS.gene032314.t1 AT2G27300 44.231 104 49 2 5 104 68 166 7.07e-24 97.4
MS.gene032314.t1 AT3G44290 43.434 99 50 2 5 103 68 160 7.78e-24 95.5
MS.gene032314.t1 AT5G09330 41.837 98 55 1 4 99 60 157 8.19e-24 99.0
MS.gene032314.t1 AT5G09330 41.837 98 55 1 4 99 60 157 8.19e-24 99.0
MS.gene032314.t1 AT5G09330 41.837 98 55 1 4 99 60 157 8.19e-24 99.0
MS.gene032314.t1 AT5G09330 41.837 98 55 1 4 99 60 157 8.19e-24 99.0
MS.gene032314.t1 AT5G09330 41.837 98 55 1 4 99 60 157 8.19e-24 99.0
MS.gene032314.t1 AT5G22290 41.509 106 55 2 5 107 75 176 4.16e-23 95.5
MS.gene032314.t1 AT3G44290 43.434 99 50 2 5 103 68 160 4.64e-23 95.5
MS.gene032314.t1 AT5G22380 44.660 103 52 3 6 103 65 167 6.95e-23 92.8
MS.gene032314.t1 AT3G44350 48.780 82 40 2 6 85 64 145 3.51e-20 84.0
MS.gene032314.t1 AT3G10490 49.367 79 37 2 25 100 2 80 7.96e-20 86.7
MS.gene032314.t1 AT3G10490 49.367 79 37 2 25 100 2 80 7.96e-20 86.7
MS.gene032314.t1 AT4G01540 31.548 168 97 4 7 171 63 215 3.00e-19 85.9
MS.gene032314.t1 AT4G01540 31.548 168 97 4 7 171 63 215 3.28e-19 85.9
MS.gene032314.t1 AT4G01540 31.548 168 97 4 7 171 63 215 3.38e-19 85.5
MS.gene032314.t1 AT4G01540 31.548 168 97 4 7 171 63 215 3.58e-19 85.1
MS.gene032314.t1 AT4G01520 30.952 168 98 4 7 171 63 215 4.93e-19 84.0
MS.gene032314.t1 AT2G18060 39.796 98 58 1 30 126 2 99 2.36e-18 81.6
MS.gene032314.t1 AT3G04420 37.500 96 57 1 3 98 58 150 6.17e-16 75.1
MS.gene032314.t1 AT3G04420 37.500 96 57 1 3 98 58 150 1.12e-15 75.1
MS.gene032314.t1 AT4G01550 42.268 97 44 4 8 98 63 153 1.80e-15 75.1
MS.gene032314.t1 AT5G04395 44.737 76 39 1 5 77 94 169 9.43e-15 70.1
MS.gene032314.t1 AT5G22290 37.624 101 51 3 31 123 2 98 2.20e-14 70.1
MS.gene032314.t1 AT5G64530 33.898 118 48 4 6 105 57 162 3.96e-13 65.9
MS.gene032314.t1 AT1G02230 32.812 128 65 5 8 132 63 172 2.44e-12 65.5
MS.gene032314.t1 AT1G02250 35.514 107 61 3 5 108 60 161 2.90e-12 65.5
MS.gene032314.t1 AT1G02220 36.364 88 50 3 8 95 63 144 5.77e-12 64.7
MS.gene032314.t1 AT4G27410 35.976 164 66 8 72 218 1 142 6.64e-12 62.0
MS.gene032314.t1 AT4G28530 36.275 102 28 2 1 102 75 139 2.20e-11 62.8

Find 64 sgRNAs with CRISPR-Local

Find 74 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTTCGTCAGTGGGGTTCT+TGG 0.206001 8.2:-47999137 None:intergenic
GAGTTGCTGGTTCTGGTTAC+TGG 0.209450 8.2:+47998466 MS.gene032314:CDS
GGTGCAGGCAAGGCGAATTT+TGG 0.246467 8.2:+47998378 None:intergenic
AGAACCATTGCTGCATTCTT+TGG 0.294749 8.2:-47998820 None:intergenic
ATTGAATCCTCACCGGAGTT+TGG 0.319990 8.2:+47999016 MS.gene032314:CDS
CCAAACAGAGTTGCTGGTTC+TGG 0.323652 8.2:+47998459 MS.gene032314:CDS
CTGTTTGGTCTAGAACCATT+TGG 0.354289 8.2:-47998444 None:intergenic
CATTCTTTGGTTGAAAATGT+TGG 0.404347 8.2:-47998807 None:intergenic
TTTGGATATTTCCTGTCCCT+TGG 0.404470 8.2:-47998426 None:intergenic
TCTCCTCTTGCTGTAGCATT+CGG 0.405277 8.2:-47998934 None:intergenic
AAAGCGGAATGAGGACTAAC+CGG 0.407018 8.2:+47999164 MS.gene032314:CDS
CTTTGAACCTCTTCGTCAGT+GGG 0.407280 8.2:-47999145 None:intergenic
TCCTCACCGGAGTTTGGATT+AGG 0.414541 8.2:+47999022 MS.gene032314:CDS
CGTGCCACCGTTTGGTAACA+TGG 0.418390 8.2:+47999099 MS.gene032314:CDS
CCAGAACCAGCAACTCTGTT+TGG 0.423168 8.2:-47998459 None:intergenic
TCTAGACCAAACAGAGTTGC+TGG 0.423965 8.2:+47998453 MS.gene032314:CDS
ATTGATGCAGCTTGATGATT+GGG 0.428244 8.2:+47998737 MS.gene032314:intron
TATTGATGCAGCTTGATGAT+TGG 0.443903 8.2:+47998736 MS.gene032314:intron
TGGATTAGGAAACCAGAGTC+AGG 0.444473 8.2:+47999036 MS.gene032314:CDS
CTACAGCAAGAGGAGAAGTT+CGG 0.456841 8.2:+47998941 MS.gene032314:CDS
TACAGCAAGAGGAGAAGTTC+GGG 0.459516 8.2:+47998942 MS.gene032314:CDS
GTTCCTTCCGTGCCACCGTT+TGG 0.466910 8.2:+47999091 MS.gene032314:CDS
GGGTTTCACAACATGGGTGC+TGG 0.473359 8.2:+47998962 MS.gene032314:CDS
ACAACTGAAGGTAGAAAAGT+TGG 0.474990 8.2:+47998516 MS.gene032314:CDS
TTCGCCTTCATCGTCGTCCC+AGG 0.477914 8.2:+47998842 MS.gene032314:CDS
TGCTTCGCGAAACACAATCT+TGG 0.494215 8.2:+47998626 MS.gene032314:CDS
AGTCAGGGGATGCTGAATTA+CGG 0.495349 8.2:+47999052 MS.gene032314:CDS
GAAGTTCGGGTTTCACAACA+TGG 0.506769 8.2:+47998955 MS.gene032314:CDS
TATATTGGCAAAGCACCAAA+AGG 0.512258 8.2:+47998561 MS.gene032314:CDS
ATTTCTTCAGTCCAAGGGAC+AGG 0.517559 8.2:+47998415 MS.gene032314:CDS
AATTCAGCATCCCCTGACTC+TGG 0.524401 8.2:-47999048 None:intergenic
GACAAAATTATCACAACTGA+AGG 0.526909 8.2:+47998504 MS.gene032314:CDS
GCTTTGAACCTCTTCGTCAG+TGG 0.531257 8.2:-47999146 None:intergenic
AGTCCAACATTTCGTCCACC+TGG 0.531736 8.2:-47998860 None:intergenic
TCAACCAAAGAATGCAGCAA+TGG 0.536044 8.2:+47998816 MS.gene032314:CDS
GTGAGGATTCAATATCTGTC+GGG 0.549879 8.2:-47999006 None:intergenic
ATCAAAGCTTTGCATTGCCG+CGG 0.551128 8.2:+47998900 MS.gene032314:intron
AAGAGGTTCAAAGCGGAATG+AGG 0.554588 8.2:+47999155 MS.gene032314:CDS
AATGGTATTTCTTCAGTCCA+AGG 0.554883 8.2:+47998409 MS.gene032314:CDS
GACAAGTCCATGTTACCAAA+CGG 0.557895 8.2:-47999106 None:intergenic
TCCACCTGGGACGACGATGA+AGG 0.560826 8.2:-47998846 None:intergenic
GGTGAGGATTCAATATCTGT+CGG 0.563156 8.2:-47999007 None:intergenic
AAGCGGAATGAGGACTAACC+GGG 0.566841 8.2:+47999165 MS.gene032314:CDS
ACTCCGAATGCTACAGCAAG+AGG 0.568493 8.2:+47998931 MS.gene032314:CDS
TCAAAGCTTTGCATTGCCGC+GGG 0.571006 8.2:+47998901 MS.gene032314:intron
TTACCAAACGGTGGCACGGA+AGG 0.576728 8.2:-47999094 None:intergenic
GGATTAGGAAACCAGAGTCA+GGG 0.583546 8.2:+47999037 MS.gene032314:CDS
CAAGAACCCCACTGACGAAG+AGG 0.586015 8.2:+47999138 MS.gene032314:CDS
ATGGTATTTCTTCAGTCCAA+GGG 0.588129 8.2:+47998410 MS.gene032314:CDS
AGGGACAGGAAATATCCAAA+TGG 0.592563 8.2:+47998429 MS.gene032314:CDS
TCTGGTTACTGGAAAGCCAC+AGG 0.607999 8.2:+47998477 MS.gene032314:CDS
GCCTTCATCGTCGTCCCAGG+TGG 0.609301 8.2:+47998845 MS.gene032314:CDS
CATGTTACCAAACGGTGGCA+CGG 0.615690 8.2:-47999098 None:intergenic
TGGTAACATGGACTTGTCAG+CGG 0.622784 8.2:+47999111 MS.gene032314:CDS
GTCCAACATTTCGTCCACCT+GGG 0.623948 8.2:-47998859 None:intergenic
GACAGATATTGAATCCTCAC+CGG 0.626126 8.2:+47999009 MS.gene032314:CDS
GATTAGGAAACCAGAGTCAG+GGG 0.641898 8.2:+47999038 MS.gene032314:CDS
TTTGAACCTCTTCGTCAGTG+GGG 0.654075 8.2:-47999144 None:intergenic
TGGTTTCCTAATCCAAACTC+CGG 0.659176 8.2:-47999028 None:intergenic
TCCTAATCCAAACTCCGGTG+AGG 0.662436 8.2:-47999023 None:intergenic
AAGTTCGGGTTTCACAACAT+GGG 0.678618 8.2:+47998956 MS.gene032314:CDS
ATTCGGAGTGATGTTACCCG+CGG 0.710388 8.2:-47998917 None:intergenic
AAGTCCATGTTACCAAACGG+TGG 0.727825 8.2:-47999103 None:intergenic
ACTGACGAAGAGGTTCAAAG+CGG 0.781762 8.2:+47999148 MS.gene032314:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! CAAAAGGAACAAAAACTAAT+TGG + chr8.2:47998577-47998596 MS.gene032314:CDS 25.0%
!!! AAAGCACTTGTTTTCTATAT+TGG + chr8.2:47998546-47998565 MS.gene032314:CDS 25.0%
!!! CAATTAGTTTTTGTTCCTTT+TGG - chr8.2:47998579-47998598 None:intergenic 25.0%
CATTCTTTGGTTGAAAATGT+TGG - chr8.2:47998810-47998829 None:intergenic 30.0%
CTCATCAATAAAAATGAGCA+AGG - chr8.2:47998688-47998707 None:intergenic 30.0%
GACAAAATTATCACAACTGA+AGG + chr8.2:47998504-47998523 MS.gene032314:CDS 30.0%
AATGGTATTTCTTCAGTCCA+AGG + chr8.2:47998409-47998428 MS.gene032314:CDS 35.0%
ACAACTGAAGGTAGAAAAGT+TGG + chr8.2:47998516-47998535 MS.gene032314:CDS 35.0%
ATGGTATTTCTTCAGTCCAA+GGG + chr8.2:47998410-47998429 MS.gene032314:CDS 35.0%
! ATTGATGCAGCTTGATGATT+GGG + chr8.2:47998737-47998756 MS.gene032314:intron 35.0%
! GATAATTTTGTCTGTTCCTG+TGG - chr8.2:47998496-47998515 None:intergenic 35.0%
! TATATTGGCAAAGCACCAAA+AGG + chr8.2:47998561-47998580 MS.gene032314:CDS 35.0%
! TATTGATGCAGCTTGATGAT+TGG + chr8.2:47998736-47998755 MS.gene032314:intron 35.0%
!! CGAATTTTGGTGAGAAAGAA+TGG + chr8.2:47998391-47998410 MS.gene032314:CDS 35.0%
AGAACCATTGCTGCATTCTT+TGG - chr8.2:47998823-47998842 None:intergenic 40.0%
AGGGACAGGAAATATCCAAA+TGG + chr8.2:47998429-47998448 MS.gene032314:CDS 40.0%
GAAAAACTCAAGCTCGCAAA+AGG + chr8.2:47998779-47998798 MS.gene032314:CDS 40.0%
GACAAGTCCATGTTACCAAA+CGG - chr8.2:47999109-47999128 None:intergenic 40.0%
GACAGATATTGAATCCTCAC+CGG + chr8.2:47999009-47999028 MS.gene032314:CDS 40.0%
GGTGAGGATTCAATATCTGT+CGG - chr8.2:47999010-47999029 None:intergenic 40.0%
GTGAGGATTCAATATCTGTC+GGG - chr8.2:47999009-47999028 None:intergenic 40.0%
TCAACCAAAGAATGCAGCAA+TGG + chr8.2:47998816-47998835 MS.gene032314:CDS 40.0%
TGGTTTCCTAATCCAAACTC+CGG - chr8.2:47999031-47999050 None:intergenic 40.0%
TTTGGATATTTCCTGTCCCT+TGG - chr8.2:47998429-47998448 None:intergenic 40.0%
! AAGTTCGGGTTTCACAACAT+GGG + chr8.2:47998956-47998975 MS.gene032314:CDS 40.0%
! CTGTTTGGTCTAGAACCATT+TGG - chr8.2:47998447-47998466 None:intergenic 40.0%
! TGCTGGACTTTTCTCTGATT+GGG + chr8.2:47998979-47998998 MS.gene032314:CDS 40.0%
AAAGCGGAATGAGGACTAAC+CGG + chr8.2:47999164-47999183 MS.gene032314:CDS 45.0%
AAGAGGTTCAAAGCGGAATG+AGG + chr8.2:47999155-47999174 MS.gene032314:CDS 45.0%
AAGTCCATGTTACCAAACGG+TGG - chr8.2:47999106-47999125 None:intergenic 45.0%
ACGAAATGTTGGACTCGTTC+TGG + chr8.2:47998868-47998887 MS.gene032314:intron 45.0%
ACTGACGAAGAGGTTCAAAG+CGG + chr8.2:47999148-47999167 MS.gene032314:CDS 45.0%
AGTCAGGGGATGCTGAATTA+CGG + chr8.2:47999052-47999071 MS.gene032314:CDS 45.0%
ATCAAAGCTTTGCATTGCCG+CGG + chr8.2:47998900-47998919 MS.gene032314:intron 45.0%
ATTGAATCCTCACCGGAGTT+TGG + chr8.2:47999016-47999035 MS.gene032314:CDS 45.0%
ATTTCTTCAGTCCAAGGGAC+AGG + chr8.2:47998415-47998434 MS.gene032314:CDS 45.0%
CTACAGCAAGAGGAGAAGTT+CGG + chr8.2:47998941-47998960 MS.gene032314:CDS 45.0%
CTTTGAACCTCTTCGTCAGT+GGG - chr8.2:47999148-47999167 None:intergenic 45.0%
GATTAGGAAACCAGAGTCAG+GGG + chr8.2:47999038-47999057 MS.gene032314:CDS 45.0%
GGATTAGGAAACCAGAGTCA+GGG + chr8.2:47999037-47999056 MS.gene032314:CDS 45.0%
TACAGCAAGAGGAGAAGTTC+GGG + chr8.2:47998942-47998961 MS.gene032314:CDS 45.0%
TCTAGACCAAACAGAGTTGC+TGG + chr8.2:47998453-47998472 MS.gene032314:CDS 45.0%
TGCTTCGCGAAACACAATCT+TGG + chr8.2:47998626-47998645 MS.gene032314:CDS 45.0%
TGGTAACATGGACTTGTCAG+CGG + chr8.2:47999111-47999130 MS.gene032314:CDS 45.0%
TTTGAACCTCTTCGTCAGTG+GGG - chr8.2:47999147-47999166 None:intergenic 45.0%
! GAAGTTCGGGTTTCACAACA+TGG + chr8.2:47998955-47998974 MS.gene032314:CDS 45.0%
! GTGCTGGACTTTTCTCTGAT+TGG + chr8.2:47998978-47998997 MS.gene032314:CDS 45.0%
! TCTCCTCTTGCTGTAGCATT+CGG - chr8.2:47998937-47998956 None:intergenic 45.0%
! TGGATTAGGAAACCAGAGTC+AGG + chr8.2:47999036-47999055 MS.gene032314:CDS 45.0%
AAGCGGAATGAGGACTAACC+GGG + chr8.2:47999165-47999184 MS.gene032314:CDS 50.0%
AATTCAGCATCCCCTGACTC+TGG - chr8.2:47999051-47999070 None:intergenic 50.0%
ACTCCGAATGCTACAGCAAG+AGG + chr8.2:47998931-47998950 MS.gene032314:CDS 50.0%
AGTCCAACATTTCGTCCACC+TGG - chr8.2:47998863-47998882 None:intergenic 50.0%
ATTCGGAGTGATGTTACCCG+CGG - chr8.2:47998920-47998939 None:intergenic 50.0%
CATGTTACCAAACGGTGGCA+CGG - chr8.2:47999101-47999120 None:intergenic 50.0%
CCAGAACCAGCAACTCTGTT+TGG - chr8.2:47998462-47998481 None:intergenic 50.0%
GTCCAACATTTCGTCCACCT+GGG - chr8.2:47998862-47998881 None:intergenic 50.0%
TCAAAGCTTTGCATTGCCGC+GGG + chr8.2:47998901-47998920 MS.gene032314:intron 50.0%
TCCTAATCCAAACTCCGGTG+AGG - chr8.2:47999026-47999045 None:intergenic 50.0%
TCCTCACCGGAGTTTGGATT+AGG + chr8.2:47999022-47999041 MS.gene032314:CDS 50.0%
TCTGGTTACTGGAAAGCCAC+AGG + chr8.2:47998477-47998496 MS.gene032314:CDS 50.0%
! GCTTTGAACCTCTTCGTCAG+TGG - chr8.2:47999149-47999168 None:intergenic 50.0%
!! CCAAACAGAGTTGCTGGTTC+TGG + chr8.2:47998459-47998478 MS.gene032314:CDS 50.0%
!! GAGTTGCTGGTTCTGGTTAC+TGG + chr8.2:47998466-47998485 MS.gene032314:CDS 50.0%
CAAGAACCCCACTGACGAAG+AGG + chr8.2:47999138-47999157 MS.gene032314:CDS 55.0%
CTCTTCGTCAGTGGGGTTCT+TGG - chr8.2:47999140-47999159 None:intergenic 55.0%
GGGTTTCACAACATGGGTGC+TGG + chr8.2:47998962-47998981 MS.gene032314:CDS 55.0%
GTCCCAGGTGGACGAAATGT+TGG + chr8.2:47998857-47998876 MS.gene032314:intron 55.0%
TTACCAAACGGTGGCACGGA+AGG - chr8.2:47999097-47999116 None:intergenic 55.0%
! CGTGCCACCGTTTGGTAACA+TGG + chr8.2:47999099-47999118 MS.gene032314:CDS 55.0%
GTTCCTTCCGTGCCACCGTT+TGG + chr8.2:47999091-47999110 MS.gene032314:CDS 60.0%
TCCACCTGGGACGACGATGA+AGG - chr8.2:47998849-47998868 None:intergenic 60.0%
TTCGCCTTCATCGTCGTCCC+AGG + chr8.2:47998842-47998861 MS.gene032314:CDS 60.0%
GCCTTCATCGTCGTCCCAGG+TGG + chr8.2:47998845-47998864 MS.gene032314:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 47998390 47999186 47998390 ID=MS.gene032314
chr8.2 mRNA 47998390 47999186 47998390 ID=MS.gene032314.t1;Parent=MS.gene032314
chr8.2 exon 47998390 47998647 47998390 ID=MS.gene032314.t1.exon1;Parent=MS.gene032314.t1
chr8.2 CDS 47998390 47998647 47998390 ID=cds.MS.gene032314.t1;Parent=MS.gene032314.t1
chr8.2 exon 47998747 47998874 47998747 ID=MS.gene032314.t1.exon2;Parent=MS.gene032314.t1
chr8.2 CDS 47998747 47998874 47998747 ID=cds.MS.gene032314.t1;Parent=MS.gene032314.t1
chr8.2 exon 47998907 47999186 47998907 ID=MS.gene032314.t1.exon3;Parent=MS.gene032314.t1
chr8.2 CDS 47998907 47999186 47998907 ID=cds.MS.gene032314.t1;Parent=MS.gene032314.t1
Gene Sequence

>MS.gene032314

GCGAATTTTGGTGAGAAAGAATGGTATTTCTTCAGTCCAAGGGACAGGAAATATCCAAATGGTTCTAGACCAAACAGAGTTGCTGGTTCTGGTTACTGGAAAGCCACAGGAACAGACAAAATTATCACAACTGAAGGTAGAAAAGTTGGCATAAAAAAAGCACTTGTTTTCTATATTGGCAAAGCACCAAAAGGAACAAAAACTAATTGGATTATGCATGAGTATCGTCTTCTTGATGCTTCGCGAAACACAATCTTGGTAGCTCAAAAGTAAGCAACACAATCGTATTATATTTCCTTGCTCATTTTTATTGATGAGAAAAGTAAAGAATCTAACTTATTTGATTTATTGATGCAGCTTGATGATTGGGTTTTGTGTCGAATATACAAGAAAAACTCAAGCTCGCAAAAGGAAATTCCAACATTTTCAACCAAAGAATGCAGCAATGGTTCTTCGCCTTCATCGTCGTCCCAGGTGGACGAAATGTTGGACTCGTTCTGGAAATTGATGATCAAAGCTTTGCATTGCCGCGGGTAACATCACTCCGAATGCTACAGCAAGAGGAGAAGTTCGGGTTTCACAACATGGGTGCTGGACTTTTCTCTGATTGGGTTAACCCGACAGATATTGAATCCTCACCGGAGTTTGGATTAGGAAACCAGAGTCAGGGGATGCTGAATTACGGTTGTAATGACTATTGTGTTCCTTCCGTGCCACCGTTTGGTAACATGGACTTGTCAGCGGAGTCCAAGAACCCCACTGACGAAGAGGTTCAAAGCGGAATGAGGACTAACCGG
Protein sequence

>MS.gene032314.t1

ANFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYIGKAPKGTKTNWIMHEYRLLDASRNTILLDDWVLCRIYKKNSSSQKEIPTFSTKECSNGSSPSSSSQVDEIFALPRVTSLRMLQQEEKFGFHNMGAGLFSDWVNPTDIESSPEFGLGNQSQGMLNYGCNDYCVPSVPPFGNMDLSAESKNPTDEEVQSGMRTNR