Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032357.t1 | KEH19503.1 | 96.8 | 710 | 22 | 1 | 1 | 709 | 1 | 710 | 0.00E+00 | 1399 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032357.t1 | Q56XZ1 | 48.8 | 705 | 304 | 12 | 10 | 709 | 10 | 662 | 2.1e-177 | 624.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032357.t1 | A0A072TRN9 | 96.8 | 710 | 22 | 1 | 1 | 709 | 1 | 710 | 0.0e+00 | 1399.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene032357.t1 | TF | STAT |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032357.t1 | MTR_8g461480 | 96.761 | 710 | 22 | 1 | 1 | 709 | 1 | 710 | 0.0 | 1418 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032357.t1 | AT1G78540 | 48.319 | 714 | 312 | 12 | 1 | 709 | 1 | 662 | 0.0 | 628 |
| MS.gene032357.t1 | AT1G78540 | 48.319 | 714 | 312 | 12 | 1 | 709 | 1 | 662 | 0.0 | 627 |
| MS.gene032357.t1 | AT1G17040 | 47.133 | 715 | 292 | 10 | 1 | 709 | 1 | 635 | 0.0 | 616 |
| MS.gene032357.t1 | AT1G17040 | 46.621 | 725 | 291 | 11 | 1 | 709 | 1 | 645 | 0.0 | 608 |
| MS.gene032357.t1 | AT1G78540 | 47.453 | 687 | 304 | 12 | 1 | 682 | 1 | 635 | 0.0 | 591 |
| MS.gene032357.t1 | AT1G17040 | 46.366 | 688 | 283 | 10 | 1 | 682 | 1 | 608 | 0.0 | 583 |
Find 178 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAACTTTCTCTTTCTGCTTT+TGG | 0.137670 | 8.2:+48685451 | MS.gene032357:CDS |
| AAAGGATAATCTCCTAATTT+TGG | 0.151104 | 8.2:-48690886 | None:intergenic |
| ATCTCTTGGAAATTAATATT+TGG | 0.178295 | 8.2:-48696103 | None:intergenic |
| TTCTACCCCAGATTGCTTTA+TGG | 0.181537 | 8.2:-48691151 | None:intergenic |
| TATCAAAGATCATCATTTAA+AGG | 0.184938 | 8.2:+48688211 | MS.gene032357:CDS |
| TATATTCGGCTTCACATTAA+TGG | 0.190807 | 8.2:+48688035 | MS.gene032357:CDS |
| ATGTGAAGCCGAATATAATT+TGG | 0.226222 | 8.2:-48688029 | None:intergenic |
| TTCCTTCAAATTACTTGAAT+TGG | 0.227549 | 8.2:-48688105 | None:intergenic |
| ATGAATCCTTCAATCCATTT+AGG | 0.246881 | 8.2:-48697062 | None:intergenic |
| ATTGGATTCCTTATGTAATA+AGG | 0.269045 | 8.2:-48688087 | None:intergenic |
| CAAGGAATGGGGTGGTTGTT+TGG | 0.283394 | 8.2:-48696164 | None:intergenic |
| CTTTCAATGGATCATATATA+CGG | 0.288269 | 8.2:+48697248 | MS.gene032357:CDS |
| GGAATTCCATGTCACCTAAA+TGG | 0.294593 | 8.2:+48697048 | MS.gene032357:CDS |
| TTCTTCTTCAACCTCAGATA+TGG | 0.297680 | 8.2:-48688407 | None:intergenic |
| ATATTCGGCTTCACATTAAT+GGG | 0.313116 | 8.2:+48688036 | MS.gene032357:CDS |
| ACAATTAGGCAACCGGCATC+TGG | 0.320701 | 8.2:-48697185 | None:intergenic |
| GATGGTGTTTGGGGCATTGT+TGG | 0.327498 | 8.2:+48688433 | MS.gene032357:CDS |
| AGGTTTGTCCAAATTATATT+CGG | 0.332939 | 8.2:+48688021 | MS.gene032357:intron |
| GTGGGGCCAGCTTCTTGAGG+TGG | 0.338393 | 8.2:-48697162 | None:intergenic |
| TAGAAGATGGAACTAATCTT+TGG | 0.341777 | 8.2:+48696129 | MS.gene032357:CDS |
| TGCCTAATTGTTACATATGT+TGG | 0.346266 | 8.2:+48697197 | MS.gene032357:CDS |
| TCATGTATGGACTGCTAATC+AGG | 0.353019 | 8.2:+48691185 | MS.gene032357:CDS |
| CTACTTTCCATGCTATTTGA+AGG | 0.360932 | 8.2:-48693406 | None:intergenic |
| CTGTTACTTGCATGGGTCCT+TGG | 0.362933 | 8.2:+48686955 | MS.gene032357:CDS |
| TCCCAACATATGTAACAATT+AGG | 0.370251 | 8.2:-48697199 | None:intergenic |
| CCCTACCACCATTCTTCATC+AGG | 0.370260 | 8.2:+48685500 | MS.gene032357:CDS |
| TGCCAGACAGTATTTGAAAA+TGG | 0.371618 | 8.2:-48693452 | None:intergenic |
| CACATTAATGGGGAGATTGT+AGG | 0.372402 | 8.2:+48688047 | MS.gene032357:CDS |
| AGAAGAAAGTGATGGTGTTT+GGG | 0.375693 | 8.2:+48688423 | MS.gene032357:CDS |
| GCCTAATTGTTACATATGTT+GGG | 0.381610 | 8.2:+48697198 | MS.gene032357:CDS |
| AACCCCACCATAAAGCAATC+TGG | 0.385813 | 8.2:+48691144 | MS.gene032357:CDS |
| CAAGGACCCATGCAAGTAAC+AGG | 0.387372 | 8.2:-48686954 | None:intergenic |
| AAGAAGAAAGTGATGGTGTT+TGG | 0.389600 | 8.2:+48688422 | MS.gene032357:CDS |
| GGGACTGGGTAAATGCTATC+TGG | 0.392153 | 8.2:+48697027 | MS.gene032357:CDS |
| TCCATCTTCTATCAATCTCT+TGG | 0.394660 | 8.2:-48696117 | None:intergenic |
| CAAATACTGTCTGGCAGGCT+TGG | 0.395074 | 8.2:+48693459 | MS.gene032357:CDS |
| GAACCTGAGCTGTCCCGTTT+GGG | 0.400255 | 8.2:+48698157 | MS.gene032357:CDS |
| TCCAAGAGATTGATAGAAGA+TGG | 0.402990 | 8.2:+48696116 | MS.gene032357:CDS |
| TAAGCTGAAAGATTTATGTT+TGG | 0.403034 | 8.2:+48685410 | MS.gene032357:CDS |
| TAGAGAACTTTGAGAAGTTA+TGG | 0.403203 | 8.2:+48696970 | MS.gene032357:CDS |
| TAATTTGAAGGAAATACATT+TGG | 0.404039 | 8.2:+48688115 | MS.gene032357:CDS |
| AGAACCTGAGCTGTCCCGTT+TGG | 0.407753 | 8.2:+48698156 | MS.gene032357:CDS |
| AACGAGAAAAGGAGCACTTT+CGG | 0.410857 | 8.2:-48686874 | None:intergenic |
| TGGGGCCAGCTTCTTGAGGT+GGG | 0.411262 | 8.2:-48697161 | None:intergenic |
| ATTTGGACAGCCTGTTGATA+TGG | 0.412767 | 8.2:+48688995 | MS.gene032357:CDS |
| GAGATTCTAAGAAGCATTGC+GGG | 0.414323 | 8.2:+48696927 | MS.gene032357:CDS |
| TCGCCACAAACTACTTTCAA+TGG | 0.414819 | 8.2:+48697235 | MS.gene032357:CDS |
| AGATTGCTTTATGGTGGGGT+TGG | 0.415607 | 8.2:-48691142 | None:intergenic |
| ACTGTCTTCCTTATTACATA+AGG | 0.420661 | 8.2:+48688079 | MS.gene032357:CDS |
| ACCTCATTCTCCATATCAAC+AGG | 0.425279 | 8.2:-48689005 | None:intergenic |
| AATGTAATAATTCTCATGTA+TGG | 0.426139 | 8.2:+48691172 | MS.gene032357:CDS |
| TCATGAAGATTGCTTCTTGT+GGG | 0.429431 | 8.2:+48696219 | MS.gene032357:CDS |
| CAAACAACCACCCCATTCCT+TGG | 0.429564 | 8.2:+48696165 | MS.gene032357:CDS |
| GTCCGATTCGATGCATCTCC+AGG | 0.430659 | 8.2:+48690926 | MS.gene032357:CDS |
| GTCAAGATCTCTCTCTCATC+AGG | 0.431837 | 8.2:+48696241 | MS.gene032357:CDS |
| ATATAAAATTAGGTTGAGAA+TGG | 0.431848 | 8.2:+48693289 | MS.gene032357:intron |
| ATACATTTGGCCAACCTTTG+TGG | 0.433609 | 8.2:+48688128 | MS.gene032357:CDS |
| TTCCATCATAGCTAGACAAA+AGG | 0.435470 | 8.2:-48689197 | None:intergenic |
| ACCCCAGATTGCTTTATGGT+GGG | 0.435953 | 8.2:-48691147 | None:intergenic |
| ACTGCGCTCTTCCAAGGAAT+GGG | 0.437559 | 8.2:-48696176 | None:intergenic |
| CAAGATATCTGTATCAGTTA+AGG | 0.438887 | 8.2:+48691119 | MS.gene032357:CDS |
| AGCAATTGATGATGTGTCAT+TGG | 0.443673 | 8.2:+48691029 | MS.gene032357:CDS |
| GGTGTTTGGGGCATTGTTGG+TGG | 0.445924 | 8.2:+48688436 | MS.gene032357:CDS |
| AGACAAAGAAATTTCAGAGT+TGG | 0.446109 | 8.2:+48693525 | MS.gene032357:CDS |
| TGAAGCTTCTGCCTCCTCCT+TGG | 0.447893 | 8.2:-48697087 | None:intergenic |
| TATAAAATTAGGTTGAGAAT+GGG | 0.447911 | 8.2:+48693290 | MS.gene032357:intron |
| CTGTAGCGTGTGTAATATCC+AGG | 0.453605 | 8.2:+48697006 | MS.gene032357:CDS |
| GAGGCAGAAGCTTCACTTCA+AGG | 0.453781 | 8.2:+48697095 | MS.gene032357:CDS |
| GGGGCCAGCTTCTTGAGGTG+GGG | 0.454316 | 8.2:-48697160 | None:intergenic |
| CCCCAGATTGCTTTATGGTG+GGG | 0.459838 | 8.2:-48691146 | None:intergenic |
| TCATTGGAAAGTATGAATTC+TGG | 0.460754 | 8.2:+48691045 | MS.gene032357:CDS |
| CTGGATATTACACACGCTAC+AGG | 0.462387 | 8.2:-48697005 | None:intergenic |
| ATCCAATTCAAGTAATTTGA+AGG | 0.462536 | 8.2:+48688103 | MS.gene032357:CDS |
| TGGAGACAGTAGTGGTGTGC+AGG | 0.464205 | 8.2:+48688148 | MS.gene032357:CDS |
| CACTGCGCTCTTCCAAGGAA+TGG | 0.469423 | 8.2:-48696177 | None:intergenic |
| TTGGAAGAGCGCAGTGTATG+AGG | 0.470136 | 8.2:+48696184 | MS.gene032357:CDS |
| ATATGTAACAATTAGGCAAC+CGG | 0.470781 | 8.2:-48697192 | None:intergenic |
| TCCATCATAGCTAGACAAAA+GGG | 0.472581 | 8.2:-48689196 | None:intergenic |
| AAGTAGAAGATATCAAATAT+CGG | 0.473248 | 8.2:+48693423 | MS.gene032357:CDS |
| TAGGCAACCGGCATCTGGGT+GGG | 0.474931 | 8.2:-48697180 | None:intergenic |
| AGCTGGCCCCACCCAGATGC+CGG | 0.477204 | 8.2:+48697173 | MS.gene032357:CDS |
| ATGTCACCTAAATGGATTGA+AGG | 0.477650 | 8.2:+48697056 | MS.gene032357:CDS |
| ACCCCACCATAAAGCAATCT+GGG | 0.481499 | 8.2:+48691145 | MS.gene032357:CDS |
| TATATCTTACCTTCCCAAAC+GGG | 0.481733 | 8.2:-48698170 | None:intergenic |
| TACCCCAGATTGCTTTATGG+TGG | 0.481887 | 8.2:-48691148 | None:intergenic |
| AAACCTCTTCATCAGTGGGT+TGG | 0.490109 | 8.2:-48691082 | None:intergenic |
| GCCTGTTGATATGGAGAATG+AGG | 0.491700 | 8.2:+48689004 | MS.gene032357:CDS |
| TTCACTTGTGTATGCTGACA+CGG | 0.492848 | 8.2:+48689137 | MS.gene032357:CDS |
| TCTTCATGTAAGTAAAGAAC+TGG | 0.493153 | 8.2:-48686927 | None:intergenic |
| TTCTTTGTCTGAAGCAGAGA+TGG | 0.494049 | 8.2:-48693512 | None:intergenic |
| GATCCATTGAAAGTAGTTTG+TGG | 0.495131 | 8.2:-48697238 | None:intergenic |
| ATATATCTTACCTTCCCAAA+CGG | 0.496846 | 8.2:-48698171 | None:intergenic |
| AGGCAACCGGCATCTGGGTG+GGG | 0.497592 | 8.2:-48697179 | None:intergenic |
| CGTGTGTAATATCCAGGGAC+TGG | 0.499294 | 8.2:+48697012 | MS.gene032357:CDS |
| TTCAATCCATTTAGGTGACA+TGG | 0.504658 | 8.2:-48697054 | None:intergenic |
| GAAGCTTCACTTCAAGGTCC+AGG | 0.505329 | 8.2:+48697101 | MS.gene032357:CDS |
| TTCATGAAGATTGCTTCTTG+TGG | 0.506672 | 8.2:+48696218 | MS.gene032357:CDS |
| TGGCACAGGCATCTTGTCGC+AGG | 0.510165 | 8.2:+48688940 | MS.gene032357:intron |
| CTTCCCAAACGGGACAGCTC+AGG | 0.511754 | 8.2:-48698160 | None:intergenic |
| TTATTGTTGATAACGAGAAA+AGG | 0.512110 | 8.2:-48686885 | None:intergenic |
| CTGAATCATCAGAGAGTACA+GGG | 0.512336 | 8.2:+48693371 | MS.gene032357:CDS |
| TGGGTGGGGCCAGCTTCTTG+AGG | 0.513111 | 8.2:-48697165 | None:intergenic |
| GAAGCTCCTGTTACTTGCAT+GGG | 0.514189 | 8.2:+48686948 | MS.gene032357:CDS |
| TCATCAGTTGTATTCTCGAC+TGG | 0.514337 | 8.2:-48689165 | None:intergenic |
| GTCGTGCATCATTTAAGCTC+AGG | 0.517134 | 8.2:+48689262 | MS.gene032357:CDS |
| GGTTCCCCACCTCAAGAAGC+TGG | 0.518481 | 8.2:+48697156 | MS.gene032357:CDS |
| AGATGGAACTAATCTTTGGC+TGG | 0.521756 | 8.2:+48696133 | MS.gene032357:CDS |
| ATTTAAGCTCAGGATATCTC+AGG | 0.523956 | 8.2:+48689272 | MS.gene032357:CDS |
| CAAAATTATCCACGCTGGTG+TGG | 0.527759 | 8.2:+48690959 | MS.gene032357:CDS |
| CCACGTTCTTGAAATCCTCC+TGG | 0.528277 | 8.2:-48697119 | None:intergenic |
| AAACCAACCCACTGATGAAG+AGG | 0.534477 | 8.2:+48691079 | MS.gene032357:CDS |
| TCATACACTGCGCTCTTCCA+AGG | 0.536339 | 8.2:-48696182 | None:intergenic |
| TTTCATCCAAGTGTGATAGC+AGG | 0.537892 | 8.2:+48690839 | MS.gene032357:CDS |
| TCTGAATCATCAGAGAGTAC+AGG | 0.539016 | 8.2:+48693370 | MS.gene032357:CDS |
| CAATTAGGCAACCGGCATCT+GGG | 0.539070 | 8.2:-48697184 | None:intergenic |
| GCCAGTAGCATATCTTGCAA+TGG | 0.540447 | 8.2:-48698133 | None:intergenic |
| ACCATTGCAAGATATGCTAC+TGG | 0.540687 | 8.2:+48698132 | MS.gene032357:CDS |
| CTCCTGGAGATGCATCGAAT+CGG | 0.542203 | 8.2:-48690928 | None:intergenic |
| ACTTTGAGAAGTTATGGTGC+TGG | 0.543644 | 8.2:+48696976 | MS.gene032357:CDS |
| CGGGTGTTTGTCTGAAGGAA+AGG | 0.544681 | 8.2:-48690904 | None:intergenic |
| AGAAGCTCCTGTTACTTGCA+TGG | 0.548585 | 8.2:+48686947 | MS.gene032357:CDS |
| AAGAATGGTGGTAGGGAATG+TGG | 0.550704 | 8.2:-48685493 | None:intergenic |
| CCTGATGAAGAATGGTGGTA+GGG | 0.551662 | 8.2:-48685500 | None:intergenic |
| GATAGCATTTACCCAGTCCC+TGG | 0.552763 | 8.2:-48697024 | None:intergenic |
| CTTCTTCAAAGTTAAGAGAT+CGG | 0.555555 | 8.2:-48693333 | None:intergenic |
| TCACTTGTGTATGCTGACAC+GGG | 0.556831 | 8.2:+48689138 | MS.gene032357:CDS |
| TTTCAGGATGTTCCCACCAC+AGG | 0.559339 | 8.2:+48693566 | MS.gene032357:CDS |
| ATGATTAACCTGATGAAGAA+TGG | 0.560257 | 8.2:-48685508 | None:intergenic |
| CTCTAAACCTCTTCATCAGT+GGG | 0.562428 | 8.2:-48691086 | None:intergenic |
| GGTTACGTGTACAATTATGA+AGG | 0.562441 | 8.2:+48688170 | MS.gene032357:CDS |
| GAACAACCTGCTATCACACT+TGG | 0.566917 | 8.2:-48690845 | None:intergenic |
| AAATTCACCTTCAAATAGCA+TGG | 0.570364 | 8.2:+48693399 | MS.gene032357:CDS |
| ACTACTGTCTCCACAAAGGT+TGG | 0.570979 | 8.2:-48688138 | None:intergenic |
| AGGATTCATCACCAAGGAGG+AGG | 0.573700 | 8.2:+48697076 | MS.gene032357:CDS |
| TTTCAATGGATCATATATAC+GGG | 0.575038 | 8.2:+48697249 | MS.gene032357:CDS |
| GTACTCTCTGATGATTCAGA+TGG | 0.580613 | 8.2:-48693367 | None:intergenic |
| CGCTCTTCCAAGGAATGGGG+TGG | 0.581585 | 8.2:-48696172 | None:intergenic |
| GTGTGTAATATCCAGGGACT+GGG | 0.582085 | 8.2:+48697013 | MS.gene032357:CDS |
| TCATCTATTGATAACTTCAG+AGG | 0.582464 | 8.2:-48688379 | None:intergenic |
| TTAGGCAACCGGCATCTGGG+TGG | 0.584004 | 8.2:-48697181 | None:intergenic |
| TGGAGATGCATCGAATCGGA+CGG | 0.584719 | 8.2:-48690924 | None:intergenic |
| TCTATTGATAACTTCAGAGG+AGG | 0.585690 | 8.2:-48688376 | None:intergenic |
| ACCTGATGAAGAATGGTGGT+AGG | 0.586031 | 8.2:-48685501 | None:intergenic |
| CTGATGAAGAGGTTTAGAGT+TGG | 0.586232 | 8.2:+48691090 | MS.gene032357:CDS |
| GGAGATGCATCGAATCGGAC+GGG | 0.587647 | 8.2:-48690923 | None:intergenic |
| GATGAAATGAGAAGAAACGA+AGG | 0.596652 | 8.2:+48685381 | MS.gene032357:CDS |
| CTGAGCTGTCCCGTTTGGGA+AGG | 0.597914 | 8.2:+48698161 | MS.gene032357:CDS |
| CACTTGTGTATGCTGACACG+GGG | 0.600002 | 8.2:+48689139 | MS.gene032357:CDS |
| TTGGAACACAAAATCTGATG+AGG | 0.600332 | 8.2:-48690867 | None:intergenic |
| TCGGACGGGTGTTTGTCTGA+AGG | 0.602563 | 8.2:-48690909 | None:intergenic |
| TGGATATTACACACGCTACA+GGG | 0.607476 | 8.2:-48697004 | None:intergenic |
| CAATGCTTCTTAGAATCTCA+AGG | 0.610813 | 8.2:-48696923 | None:intergenic |
| CTATTGATAACTTCAGAGGA+GGG | 0.614350 | 8.2:-48688375 | None:intergenic |
| ACATGTGGAACTTCTGTCCA+AGG | 0.615922 | 8.2:-48686972 | None:intergenic |
| TATTCGGCTTCACATTAATG+GGG | 0.619662 | 8.2:+48688037 | MS.gene032357:CDS |
| ACTCTAAACCTCTTCATCAG+TGG | 0.621417 | 8.2:-48691087 | None:intergenic |
| ATGGGTTCATGTTGGATGTG+AGG | 0.626398 | 8.2:+48687025 | MS.gene032357:CDS |
| TCAAAATCAACAGTAACATG+TGG | 0.626757 | 8.2:-48686987 | None:intergenic |
| TGAGATTCTAAGAAGCATTG+CGG | 0.636449 | 8.2:+48696926 | MS.gene032357:CDS |
| AGATGAATCATCCATATCTG+AGG | 0.644094 | 8.2:+48688396 | MS.gene032357:CDS |
| AACCTTTGTGGAGACAGTAG+TGG | 0.645377 | 8.2:+48688140 | MS.gene032357:CDS |
| CCAGGAGGATTTCAAGAACG+TGG | 0.650281 | 8.2:+48697119 | MS.gene032357:CDS |
| CTGCGCTCTTCCAAGGAATG+GGG | 0.656673 | 8.2:-48696175 | None:intergenic |
| ATGAAATGAGAAGAAACGAA+GGG | 0.660758 | 8.2:+48685382 | MS.gene032357:CDS |
| CACCACTACTGTCTCCACAA+AGG | 0.671743 | 8.2:-48688142 | None:intergenic |
| GGAGACAGTAGTGGTGTGCA+GGG | 0.672818 | 8.2:+48688149 | MS.gene032357:CDS |
| GAAGAAAGTGATGGTGTTTG+GGG | 0.673785 | 8.2:+48688424 | MS.gene032357:CDS |
| CCATCATAGCTAGACAAAAG+GGG | 0.681924 | 8.2:-48689195 | None:intergenic |
| CCCCACCATAAAGCAATCTG+GGG | 0.685299 | 8.2:+48691146 | MS.gene032357:CDS |
| GAGGTTGAAGAAGAAAGTGA+TGG | 0.685547 | 8.2:+48688415 | MS.gene032357:CDS |
| TGTAGCGTGTGTAATATCCA+GGG | 0.688612 | 8.2:+48697007 | MS.gene032357:CDS |
| TAACACAAAATTATCCACGC+TGG | 0.694520 | 8.2:+48690954 | MS.gene032357:CDS |
| GCTTCACTTCAAGGTCCAGG+AGG | 0.697928 | 8.2:+48697104 | MS.gene032357:CDS |
| ACTTGTGTATGCTGACACGG+GGG | 0.701144 | 8.2:+48689140 | MS.gene032357:CDS |
| TGAAGGATTCATCACCAAGG+AGG | 0.729057 | 8.2:+48697073 | MS.gene032357:CDS |
| ATTAACCTGATGAAGAATGG+TGG | 0.731909 | 8.2:-48685505 | None:intergenic |
| GATTGAAGGATTCATCACCA+AGG | 0.751713 | 8.2:+48697070 | MS.gene032357:CDS |
| TGAATCATCAGAGAGTACAG+GGG | 0.779447 | 8.2:+48693372 | MS.gene032357:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 48685372 | 48698498 | 48685372 | ID=MS.gene032357 |
| chr8.2 | mRNA | 48685372 | 48698498 | 48685372 | ID=MS.gene032357.t1;Parent=MS.gene032357 |
| chr8.2 | exon | 48685372 | 48685521 | 48685372 | ID=MS.gene032357.t1.exon1;Parent=MS.gene032357.t1 |
| chr8.2 | CDS | 48685372 | 48685521 | 48685372 | ID=cds.MS.gene032357.t1;Parent=MS.gene032357.t1 |
| chr8.2 | exon | 48686858 | 48687046 | 48686858 | ID=MS.gene032357.t1.exon2;Parent=MS.gene032357.t1 |
| chr8.2 | CDS | 48686858 | 48687046 | 48686858 | ID=cds.MS.gene032357.t1;Parent=MS.gene032357.t1 |
| chr8.2 | exon | 48688023 | 48688232 | 48688023 | ID=MS.gene032357.t1.exon3;Parent=MS.gene032357.t1 |
| chr8.2 | CDS | 48688023 | 48688232 | 48688023 | ID=cds.MS.gene032357.t1;Parent=MS.gene032357.t1 |
| chr8.2 | exon | 48688373 | 48688462 | 48688373 | ID=MS.gene032357.t1.exon4;Parent=MS.gene032357.t1 |
| chr8.2 | CDS | 48688373 | 48688462 | 48688373 | ID=cds.MS.gene032357.t1;Parent=MS.gene032357.t1 |
| chr8.2 | exon | 48688948 | 48689025 | 48688948 | ID=MS.gene032357.t1.exon5;Parent=MS.gene032357.t1 |
| chr8.2 | CDS | 48688948 | 48689025 | 48688948 | ID=cds.MS.gene032357.t1;Parent=MS.gene032357.t1 |
| chr8.2 | exon | 48689129 | 48689293 | 48689129 | ID=MS.gene032357.t1.exon6;Parent=MS.gene032357.t1 |
| chr8.2 | CDS | 48689129 | 48689293 | 48689129 | ID=cds.MS.gene032357.t1;Parent=MS.gene032357.t1 |
| chr8.2 | exon | 48690838 | 48691206 | 48690838 | ID=MS.gene032357.t1.exon7;Parent=MS.gene032357.t1 |
| chr8.2 | CDS | 48690838 | 48691206 | 48690838 | ID=cds.MS.gene032357.t1;Parent=MS.gene032357.t1 |
| chr8.2 | exon | 48693301 | 48693587 | 48693301 | ID=MS.gene032357.t1.exon8;Parent=MS.gene032357.t1 |
| chr8.2 | CDS | 48693301 | 48693587 | 48693301 | ID=cds.MS.gene032357.t1;Parent=MS.gene032357.t1 |
| chr8.2 | exon | 48696100 | 48696262 | 48696100 | ID=MS.gene032357.t1.exon9;Parent=MS.gene032357.t1 |
| chr8.2 | CDS | 48696100 | 48696262 | 48696100 | ID=cds.MS.gene032357.t1;Parent=MS.gene032357.t1 |
| chr8.2 | exon | 48696921 | 48697270 | 48696921 | ID=MS.gene032357.t1.exon10;Parent=MS.gene032357.t1 |
| chr8.2 | CDS | 48696921 | 48697270 | 48696921 | ID=cds.MS.gene032357.t1;Parent=MS.gene032357.t1 |
| chr8.2 | exon | 48698105 | 48698182 | 48698105 | ID=MS.gene032357.t1.exon11;Parent=MS.gene032357.t1 |
| chr8.2 | CDS | 48698105 | 48698182 | 48698105 | ID=cds.MS.gene032357.t1;Parent=MS.gene032357.t1 |
| chr8.2 | exon | 48698471 | 48698498 | 48698471 | ID=MS.gene032357.t1.exon12;Parent=MS.gene032357.t1 |
| chr8.2 | CDS | 48698471 | 48698498 | 48698471 | ID=cds.MS.gene032357.t1;Parent=MS.gene032357.t1 |
| Gene Sequence |
| Protein sequence |
