AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene032716

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032716.t1 MTR_5g037250 89.627 241 23 1 1 241 1 239 6.49e-164 452
MS.gene032716.t1 MTR_8g062240 60.377 265 67 8 5 240 22 277 1.30e-92 273
MS.gene032716.t1 MTR_8g012290 54.777 157 53 1 55 193 214 370 3.02e-46 160
MS.gene032716.t1 MTR_8g012290 54.777 157 53 1 55 193 214 370 3.07e-46 160
MS.gene032716.t1 MTR_7g053410 62.406 133 46 1 70 202 277 405 1.41e-44 156
MS.gene032716.t1 MTR_7g053410 62.406 133 46 1 70 202 277 405 1.82e-44 156
MS.gene032716.t1 MTR_4g070320 61.905 126 47 1 78 202 107 232 6.32e-43 148
MS.gene032716.t1 MTR_3g116770 65.833 120 33 2 83 196 162 279 3.63e-42 147
MS.gene032716.t1 MTR_3g116770 65.833 120 33 2 83 196 162 279 3.84e-42 147
MS.gene032716.t1 MTR_8g065740 54.795 146 61 3 93 233 283 428 2.33e-40 144
MS.gene032716.t1 MTR_5g048860 70.588 102 29 1 93 193 343 444 1.87e-39 143
MS.gene032716.t1 MTR_3g498825 58.537 123 49 1 63 185 98 218 3.97e-39 138
MS.gene032716.t1 MTR_8g099880 85.333 75 11 0 111 185 142 216 7.40e-39 137
MS.gene032716.t1 MTR_1g017350 72.043 93 25 1 94 185 239 331 1.71e-38 138
MS.gene032716.t1 MTR_1g017350 72.043 93 25 1 94 185 239 331 1.91e-38 138
MS.gene032716.t1 MTR_1g017350 72.043 93 25 1 94 185 239 331 2.22e-38 138
MS.gene032716.t1 MTR_1g017350 72.043 93 25 1 94 185 239 331 2.50e-38 138
MS.gene032716.t1 MTR_1g059270 78.667 75 16 0 111 185 157 231 1.51e-36 129
MS.gene032716.t1 MTR_1g059270 78.667 75 16 0 111 185 157 231 8.21e-36 129
MS.gene032716.t1 MTR_7g092510 75.000 80 20 0 108 187 167 246 6.85e-35 127
MS.gene032716.t1 MTR_6g084120 54.348 92 33 1 95 186 136 218 1.98e-25 100
MS.gene032716.t1 MTR_4g131160 66.667 66 21 1 114 179 196 260 1.80e-20 89.4
MS.gene032716.t1 MTR_4g131160 61.644 73 27 1 107 179 192 263 1.91e-20 89.4
MS.gene032716.t1 MTR_1g080890 60.000 75 29 1 105 179 184 257 2.76e-20 88.6
MS.gene032716.t1 MTR_1g069155 47.561 82 41 2 116 197 319 398 3.62e-15 74.7
MS.gene032716.t1 MTR_1g084980 48.438 64 32 1 116 179 464 526 2.86e-14 72.0
MS.gene032716.t1 MTR_4g065870 53.846 65 30 0 114 178 355 419 3.15e-14 71.6
MS.gene032716.t1 MTR_1g070870 45.133 113 59 3 69 179 73 184 4.26e-14 70.5
MS.gene032716.t1 MTR_4g107320 52.632 76 26 3 132 198 60 134 1.06e-13 66.6
MS.gene032716.t1 MTR_1g070870 56.000 75 32 1 105 179 114 187 1.53e-13 68.9
MS.gene032716.t1 MTR_2g098310 43.023 86 41 1 101 178 311 396 1.70e-13 69.3
MS.gene032716.t1 MTR_4g065870 53.226 62 29 0 114 175 355 416 1.73e-13 69.3
MS.gene032716.t1 MTR_7g099540 42.222 90 50 2 108 197 246 333 4.20e-13 68.6
MS.gene032716.t1 MTR_4g033295 47.692 65 34 0 114 178 118 182 4.20e-13 66.2
MS.gene032716.t1 MTR_2g098310 50.000 66 33 0 112 177 330 395 5.86e-13 67.8
MS.gene032716.t1 MTR_4g033295 46.269 67 35 1 114 179 118 184 8.03e-13 65.1
MS.gene032716.t1 MTR_1g052470 38.679 106 65 0 75 180 259 364 8.83e-13 67.4
MS.gene032716.t1 MTR_7g092540 43.243 74 42 0 114 187 243 316 6.69e-12 64.3
MS.gene032716.t1 MTR_1g019240 34.021 97 58 2 84 180 60 150 1.25e-11 63.2
MS.gene032716.t1 MTR_7g092540 46.154 65 35 0 114 178 243 307 1.46e-11 63.5
MS.gene032716.t1 MTR_8g036235 47.692 65 34 0 114 178 316 380 2.16e-11 63.2
MS.gene032716.t1 MTR_1g018090 47.692 65 33 1 114 178 274 337 2.28e-11 63.2
MS.gene032716.t1 MTR_3g103030 50.000 64 31 1 115 178 230 292 2.60e-11 62.8
MS.gene032716.t1 MTR_7g111320 42.529 87 45 2 97 179 411 496 3.27e-11 63.2
MS.gene032716.t1 MTR_7g099540 38.947 95 52 3 108 197 246 339 4.53e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032716.t1 AT1G59640 55.714 280 69 10 1 241 1 264 5.79e-86 256
MS.gene032716.t1 AT1G59640 52.119 236 59 8 1 198 1 220 4.39e-61 195
MS.gene032716.t1 AT5G62610 63.448 145 50 2 98 240 137 280 1.77e-56 182
MS.gene032716.t1 AT5G62610 63.448 145 50 2 98 240 137 280 1.77e-56 182
MS.gene032716.t1 AT3G23690 65.833 120 37 2 72 187 145 264 1.17e-43 151
MS.gene032716.t1 AT3G07340 77.895 95 18 1 96 187 237 331 2.43e-43 152
MS.gene032716.t1 AT3G07340 77.895 95 18 1 96 187 237 331 4.44e-43 151
MS.gene032716.t1 AT1G68920 66.667 114 37 1 72 185 262 374 6.83e-43 151
MS.gene032716.t1 AT1G68920 66.667 114 37 1 72 185 262 374 6.83e-43 151
MS.gene032716.t1 AT1G68920 66.667 114 37 1 72 185 262 374 6.83e-43 151
MS.gene032716.t1 AT1G68920 66.667 114 37 1 72 185 261 373 7.69e-43 151
MS.gene032716.t1 AT5G50915 48.256 172 85 3 17 185 37 207 1.40e-42 145
MS.gene032716.t1 AT5G50915 48.256 172 85 3 17 185 37 207 1.40e-42 145
MS.gene032716.t1 AT5G48560 85.185 81 12 0 105 185 292 372 2.79e-42 149
MS.gene032716.t1 AT5G50915 48.538 171 84 3 17 184 37 206 3.75e-42 145
MS.gene032716.t1 AT5G50915 48.538 171 84 3 17 184 37 206 3.75e-42 145
MS.gene032716.t1 AT5G48560 85.185 81 12 0 105 185 292 372 4.47e-42 149
MS.gene032716.t1 AT4G34530 69.697 99 29 1 90 188 149 246 2.33e-40 141
MS.gene032716.t1 AT1G26260 50.307 163 68 3 36 185 81 243 2.44e-40 142
MS.gene032716.t1 AT1G26260 50.307 163 68 3 36 185 110 272 4.25e-40 142
MS.gene032716.t1 AT1G26260 50.307 163 68 3 36 185 132 294 6.10e-40 142
MS.gene032716.t1 AT1G26260 50.307 163 68 3 36 185 132 294 6.10e-40 142
MS.gene032716.t1 AT1G26260 50.307 163 68 3 36 185 132 294 6.10e-40 142
MS.gene032716.t1 AT1G26260 50.307 163 68 3 36 185 132 294 6.10e-40 142
MS.gene032716.t1 AT2G18300 56.693 127 51 2 84 210 157 279 1.22e-39 140
MS.gene032716.t1 AT1G10120 66.327 98 33 0 88 185 180 277 2.09e-39 140
MS.gene032716.t1 AT1G10120 66.327 98 33 0 88 185 180 277 2.09e-39 140
MS.gene032716.t1 AT2G18300 56.693 127 51 2 84 210 157 279 2.23e-39 140
MS.gene032716.t1 AT4G36540 63.333 120 38 3 88 207 119 232 3.67e-39 137
MS.gene032716.t1 AT2G18300 55.906 127 50 2 84 210 157 277 4.21e-39 138
MS.gene032716.t1 AT4G36540 54.483 145 51 4 88 221 119 259 8.93e-39 137
MS.gene032716.t1 AT2G42300 73.750 80 21 0 108 187 179 258 1.43e-35 127
MS.gene032716.t1 AT3G57800 73.810 84 22 0 104 187 194 277 2.12e-35 129
MS.gene032716.t1 AT2G42300 73.750 80 21 0 108 187 179 258 8.92e-35 127
MS.gene032716.t1 AT1G25330 66.667 84 28 0 103 186 93 176 3.85e-34 122
MS.gene032716.t1 AT1G18400 73.333 75 20 0 112 186 143 217 2.00e-33 121
MS.gene032716.t1 AT1G18400 73.333 75 20 0 112 186 143 217 3.07e-33 121
MS.gene032716.t1 AT1G73830 59.804 102 41 0 85 186 118 219 4.18e-33 120
MS.gene032716.t1 AT1G73830 59.804 102 41 0 85 186 118 219 4.55e-33 120
MS.gene032716.t1 AT3G57800 47.328 131 22 1 104 187 194 324 1.24e-26 107
MS.gene032716.t1 AT2G24260 60.274 73 28 1 107 179 28 99 1.72e-21 90.1
MS.gene032716.t1 AT5G58010 66.667 66 21 1 114 179 99 163 1.14e-20 89.0
MS.gene032716.t1 AT4G30980 49.038 104 44 3 76 179 100 194 1.30e-20 89.0
MS.gene032716.t1 AT2G24260 60.274 73 28 1 107 179 131 202 1.64e-20 89.0
MS.gene032716.t1 AT4G30980 66.667 66 21 1 114 179 178 242 2.23e-20 89.0
MS.gene032716.t1 AT2G42300 80.435 46 9 0 108 153 179 224 5.71e-19 82.8
MS.gene032716.t1 AT2G42300 80.435 46 9 0 108 153 179 224 5.71e-19 82.8
MS.gene032716.t1 AT2G42300 80.435 46 9 0 108 153 179 224 7.79e-19 82.8
MS.gene032716.t1 AT1G09530 42.683 82 42 2 116 197 339 415 2.17e-14 72.4
MS.gene032716.t1 AT1G09530 42.683 82 42 2 116 197 339 415 2.17e-14 72.4
MS.gene032716.t1 AT1G09530 42.683 82 42 2 116 197 339 415 2.17e-14 72.4
MS.gene032716.t1 AT1G09530 42.683 82 42 2 116 197 339 415 2.17e-14 72.4
MS.gene032716.t1 AT1G09530 42.683 82 42 2 116 197 339 415 2.17e-14 72.4
MS.gene032716.t1 AT1G09530 42.683 82 42 2 116 197 339 415 2.17e-14 72.4
MS.gene032716.t1 AT2G20180 50.794 63 30 1 117 179 210 271 2.27e-14 72.0
MS.gene032716.t1 AT2G20180 50.794 63 30 1 117 179 210 271 2.27e-14 72.0
MS.gene032716.t1 AT2G20180 50.794 63 30 1 117 179 210 271 2.27e-14 72.0
MS.gene032716.t1 AT2G20180 50.794 63 30 1 117 179 281 342 3.37e-14 71.6
MS.gene032716.t1 AT2G20180 50.794 63 30 1 117 179 281 342 3.37e-14 71.6
MS.gene032716.t1 AT2G20180 50.794 63 30 1 117 179 281 342 3.37e-14 71.6
MS.gene032716.t1 AT2G20180 50.794 63 30 1 117 179 281 342 3.37e-14 71.6
MS.gene032716.t1 AT4G02590 41.221 131 67 4 55 179 21 147 1.04e-13 68.9
MS.gene032716.t1 AT4G28815 45.946 74 38 2 117 189 71 143 1.16e-13 68.6
MS.gene032716.t1 AT4G28800 50.000 62 30 1 117 178 252 312 2.68e-13 68.9
MS.gene032716.t1 AT4G02590 41.221 131 67 4 55 179 84 210 2.85e-13 68.6
MS.gene032716.t1 AT4G02590 41.221 131 67 4 55 179 84 210 2.85e-13 68.6
MS.gene032716.t1 AT4G28815 39.604 101 40 3 117 216 147 227 3.23e-13 68.2
MS.gene032716.t1 AT2G46970 38.947 95 52 2 90 179 163 256 4.33e-13 68.2
MS.gene032716.t1 AT2G46970 38.947 95 52 2 90 179 172 265 4.79e-13 68.2
MS.gene032716.t1 AT2G46970 38.947 95 52 2 90 179 194 287 4.94e-13 68.2
MS.gene032716.t1 AT4G28800 45.833 72 37 2 117 187 264 334 9.63e-13 67.4
MS.gene032716.t1 AT1G51140 51.562 64 31 0 114 177 304 367 9.70e-13 67.4
MS.gene032716.t1 AT2G20180 50.000 60 29 1 117 176 281 339 1.31e-12 66.6
MS.gene032716.t1 AT1G03040 59.091 66 26 1 114 179 139 203 1.56e-12 66.2
MS.gene032716.t1 AT1G03040 59.091 66 26 1 114 179 144 208 1.83e-12 65.9
MS.gene032716.t1 AT1G03040 59.091 66 26 1 114 179 144 208 2.70e-12 65.9
MS.gene032716.t1 AT1G35460 40.000 75 45 0 114 188 181 255 3.90e-12 64.7
MS.gene032716.t1 AT4G36930 33.929 112 70 3 120 229 197 306 7.02e-12 64.7
MS.gene032716.t1 AT2G42280 46.154 65 35 0 114 178 279 343 8.20e-12 64.3
MS.gene032716.t1 AT4G09180 43.284 67 38 0 112 178 182 248 9.38e-12 63.5
MS.gene032716.t1 AT2G42280 48.485 66 32 1 114 177 279 344 1.41e-11 63.9
MS.gene032716.t1 AT4G00050 47.692 65 33 1 114 178 105 168 1.57e-11 63.2
MS.gene032716.t1 AT4G28790 43.750 64 35 1 116 179 273 335 1.69e-11 63.5
MS.gene032716.t1 AT1G27740 50.000 64 31 1 115 178 168 230 2.44e-11 62.4
MS.gene032716.t1 AT4G00050 47.692 65 33 1 114 178 207 270 2.86e-11 63.2
MS.gene032716.t1 AT4G00050 47.692 65 33 1 114 178 207 270 3.31e-11 62.8
MS.gene032716.t1 AT2G43140 46.377 69 37 0 114 182 231 299 3.97e-11 62.4
MS.gene032716.t1 AT2G43140 46.377 69 37 0 114 182 134 202 6.22e-11 60.5

Find 70 sgRNAs with CRISPR-Local

Find 198 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGCATCTCGGCCCGGGTTT+TGG 0.200711 5.4:-26835707 MS.gene032716:CDS
CCGTCTCTCTTCTAATTTGC+CGG 0.282599 5.4:+26835633 None:intergenic
ACATGGATGTAGTCTTTCTT+AGG 0.313166 5.4:+26834507 None:intergenic
TGAAAGGATGAAAACTCTTC+AGG 0.347449 5.4:-26833625 MS.gene032716:CDS
CTCTTCTAATTTGCCGGCCA+TGG 0.348984 5.4:+26835639 None:intergenic
ATACTCTTTCTGCAAGACTA+TGG 0.386857 5.4:+26834454 None:intergenic
AAAGGAGAAGAAAACAGTTC+AGG 0.396640 5.4:-26834564 MS.gene032716:CDS
CGGGCCGAGATGCGGTGCTC+TGG 0.402990 5.4:+26835715 None:intergenic
ACTCTTCAGGATTTAGTCCC+TGG 0.404836 5.4:-26833612 MS.gene032716:CDS
GTGGTGGTGGTGATGGAAAA+AGG 0.410719 5.4:-26834608 MS.gene032716:CDS
ACATCCATGTCCGAGCTAGA+AGG 0.413199 5.4:-26834494 MS.gene032716:CDS
CGTATCACCTACCGGAGATC+TGG 0.413963 5.4:-26835742 MS.gene032716:CDS
GGTGATGGTGGTGGTGGTGA+TGG 0.419334 5.4:-26834615 MS.gene032716:CDS
GCCACGGCCACCACCATTGC+TGG 0.423785 5.4:+26835583 None:intergenic
TCAGGTTATTGGGAAAGCTT+TGG 0.424740 5.4:-26833325 MS.gene032716:intron
ACCAGCAATGGTGGTGGCCG+TGG 0.435658 5.4:-26835584 MS.gene032716:CDS
AACCATACCTTGTTGCATCC+AGG 0.448781 5.4:+26833594 None:intergenic
CAGAATGGTGATGGTGGTGG+TGG 0.468776 5.4:-26834621 MS.gene032716:CDS
ATGTAGTCTTTCTTAGGATG+TGG 0.471510 5.4:+26834513 None:intergenic
CTTGTAGCTTGTGAAGCAAA+TGG 0.474227 5.4:+26832312 None:intergenic
CATCCATGTCCGAGCTAGAA+GGG 0.483973 5.4:-26834493 MS.gene032716:CDS
CAGTCCAGAGCACCGCATCT+CGG 0.485710 5.4:-26835719 MS.gene032716:CDS
TATAGTTGATTATTTCATCA+AGG 0.488148 5.4:+26833301 None:intergenic
CTACTTGGTGATGAAGTGAT+TGG 0.488936 5.4:+26833277 None:intergenic
CAGAGCACCGCATCTCGGCC+CGG 0.494179 5.4:-26835714 MS.gene032716:CDS
GTGCAGAATGGTGATGGTGG+TGG 0.499973 5.4:-26834624 MS.gene032716:intron
TTACATATGCAGCTGGGAGG+TGG 0.500933 5.4:-26832258 MS.gene032716:CDS
AGAGTGGTTACATATGCAGC+TGG 0.504135 5.4:-26832265 MS.gene032716:CDS
CACTGTTGGACAGGCTCGAA+GGG 0.513137 5.4:-26833658 MS.gene032716:intron
AAAGAATTCACACCTCTACT+TGG 0.517454 5.4:+26833262 None:intergenic
ACCATACCTTGTTGCATCCA+GGG 0.518613 5.4:+26833595 None:intergenic
AGAGCACCGCATCTCGGCCC+GGG 0.519018 5.4:-26835713 MS.gene032716:CDS
GCTCTGGACTGCCAGATCTC+CGG 0.529578 5.4:+26835731 None:intergenic
AGAAACCACTGAACCATGGC+CGG 0.531555 5.4:-26835652 MS.gene032716:CDS
GACCCCTTCTAGCTCGGACA+TGG 0.533969 5.4:+26834490 None:intergenic
AAATGTGTTTCTACCAGCAA+TGG 0.550803 5.4:-26835596 MS.gene032716:CDS
GAGTTTGTGCAGAATGGTGA+TGG 0.551826 5.4:-26834630 MS.gene032716:intron
ATGGGCAATTACCAAGCCGT+TGG 0.556488 5.4:+26835556 None:intergenic
TAGCTTGACCCCTTCTAGCT+CGG 0.562528 5.4:+26834484 None:intergenic
AAAACATTAGGGAACAGTAA+AGG 0.569725 5.4:-26834582 MS.gene032716:CDS
GGATCCAGCGTATCACCTAC+CGG 0.570440 5.4:-26835750 MS.gene032716:CDS
GGTGGCCGTGGCAATTCCAA+CGG 0.571625 5.4:-26835572 MS.gene032716:CDS
ATCTCCGGTAGGTGATACGC+TGG 0.585330 5.4:+26835746 None:intergenic
ATTTGCCGGCCATGGTTCAG+TGG 0.587866 5.4:+26835647 None:intergenic
TTTGTGCAGAATGGTGATGG+TGG 0.590586 5.4:-26834627 MS.gene032716:intron
CCGTGGCAATTCCAACGGCT+TGG 0.591922 5.4:-26835567 MS.gene032716:intron
CCAAAACCCGGGCCGAGATG+CGG 0.596002 5.4:+26835707 None:intergenic
ACACTGTTGGACAGGCTCGA+AGG 0.600811 5.4:-26833659 MS.gene032716:intron
CCAAGCCGTTGGAATTGCCA+CGG 0.607266 5.4:+26835567 None:intergenic
GGAGGAAACACTTCAATACC+AGG 0.607342 5.4:+26833123 None:intergenic
AGCTGCATATGTAACCACTC+TGG 0.617342 5.4:+26832267 None:intergenic
ACCACTCTGGTGATGCACCT+CGG 0.622389 5.4:+26832280 None:intergenic
GTTTCTACCAGCAATGGTGG+TGG 0.625699 5.4:-26835590 MS.gene032716:CDS
GAAGGGAAAAGATTAGTGAA+AGG 0.632327 5.4:-26833641 MS.gene032716:CDS
AGCTTGTGAAGCAAATGGTA+TGG 0.632934 5.4:+26832317 None:intergenic
ATCCATGTCCGAGCTAGAAG+GGG 0.635640 5.4:-26834492 MS.gene032716:CDS
ATCACTTCATCACCAAGTAG+AGG 0.649314 5.4:-26833274 MS.gene032716:intron
AACACTTCAATACCAGGTGT+CGG 0.651995 5.4:+26833129 None:intergenic
CCGGCAAATTAGAAGAGAGA+CGG 0.652244 5.4:-26835633 MS.gene032716:CDS
TTTAGTCCCTGGATGCAACA+AGG 0.653073 5.4:-26833601 MS.gene032716:intron
GAGTGGTTACATATGCAGCT+GGG 0.656275 5.4:-26832264 MS.gene032716:CDS
GTAAATTCAAGACCGACACC+TGG 0.661736 5.4:-26833141 MS.gene032716:CDS
TGTGTTTCTACCAGCAATGG+TGG 0.663223 5.4:-26835593 MS.gene032716:CDS
GAACAGAAACCACTGAACCA+TGG 0.666693 5.4:-26835656 MS.gene032716:CDS
TGGACTGCCAGATCTCCGGT+AGG 0.672153 5.4:+26835735 None:intergenic
GCTACAAGAGAGTATAGCCG+AGG 0.675513 5.4:-26832297 MS.gene032716:CDS
AAACAGTTCAGGAAAGCATG+CGG 0.691753 5.4:-26834553 MS.gene032716:CDS
GCCGAGGTGCATCACCAGAG+TGG 0.701168 5.4:-26832281 MS.gene032716:CDS
TGGTTACATATGCAGCTGGG+AGG 0.711832 5.4:-26832261 MS.gene032716:CDS
TTGTGAAGCAAATGGTATGG+CGG 0.743046 5.4:+26832320 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACTTATTAATGATTAATAA+GGG + chr5.4:26832930-26832949 None:intergenic 10.0%
!!! AAATTTTTGTTTTTACAAAT+TGG - chr5.4:26833711-26833730 MS.gene032716:intron 10.0%
!!! ATTTTATATATTAGCAAAAA+TGG - chr5.4:26835284-26835303 MS.gene032716:intron 10.0%
!!! GTTGTTTTTATAAATTATAT+TGG - chr5.4:26832830-26832849 MS.gene032716:intron 10.0%
!! AACAATTCATAAATCAATAT+AGG - chr5.4:26833890-26833909 MS.gene032716:intron 15.0%
!! CAACTTATTAATGATTAATA+AGG + chr5.4:26832931-26832950 None:intergenic 15.0%
!! TTGTATATGTAAATACAAAA+TGG - chr5.4:26835430-26835449 MS.gene032716:intron 15.0%
!!! ATCTTTTTTTTTTTTTTGGT+TGG - chr5.4:26833300-26833319 MS.gene032716:CDS 15.0%
!!! ATTTATTTGAGTTTATTTAC+CGG - chr5.4:26832585-26832604 MS.gene032716:intron 15.0%
!!! ATTTTGATTTAGTTTTCTAA+TGG - chr5.4:26834298-26834317 MS.gene032716:intron 15.0%
!!! TAATGTTTTATTGTTATGTA+TGG - chr5.4:26833624-26833643 MS.gene032716:CDS 15.0%
!!! TGCTATCTTTTTTTTTTTTT+TGG - chr5.4:26833296-26833315 MS.gene032716:CDS 15.0%
!!! TTAAATTGTTTTTGTATATG+TGG - chr5.4:26832755-26832774 MS.gene032716:intron 15.0%
!!! TTAATAGTTGTTTTAGTTTT+AGG - chr5.4:26834089-26834108 MS.gene032716:intron 15.0%
!!! TTTTTTTTATTCAGGTTATT+GGG - chr5.4:26834656-26834675 MS.gene032716:intron 15.0%
!! ATTAACATCACATAATTGAA+TGG + chr5.4:26832457-26832476 None:intergenic 20.0%
!! CAATAACCTGAATAAAAAAA+AGG + chr5.4:26834657-26834676 None:intergenic 20.0%
!! TAGACCTAGTATAAATTAAA+GGG - chr5.4:26835549-26835568 MS.gene032716:intron 20.0%
!! TAGTATAACTAAATGGTTAA+AGG - chr5.4:26832530-26832549 MS.gene032716:intron 20.0%
!! TATAGTTGATTATTTCATCA+AGG + chr5.4:26834693-26834712 None:intergenic 20.0%
!! TCGTATTTACAAAGTAAAAT+GGG - chr5.4:26835507-26835526 MS.gene032716:intron 20.0%
!! TGCAATTTGGTATTATAATA+TGG - chr5.4:26833249-26833268 MS.gene032716:intron 20.0%
!! TTAACATCACATAATTGAAT+GGG + chr5.4:26832456-26832475 None:intergenic 20.0%
!! TTAGACCTAGTATAAATTAA+AGG - chr5.4:26835548-26835567 MS.gene032716:intron 20.0%
!!! AAATTGGTAGTATAACTAAA+TGG - chr5.4:26832523-26832542 MS.gene032716:intron 20.0%
!!! ATTTAGTTCTACTAGAAAAT+TGG - chr5.4:26832507-26832526 MS.gene032716:intron 20.0%
!!! CACAAAGTGTATTTTTTATA+TGG - chr5.4:26833579-26833598 MS.gene032716:intron 20.0%
!!! CTTTTTTTTATTCAGGTTAT+TGG - chr5.4:26834655-26834674 MS.gene032716:intron 20.0%
!!! GTTCTATATATTCTAAAAGT+TGG - chr5.4:26834935-26834954 MS.gene032716:intron 20.0%
!!! GTTGTTTTTATAAGCTATAA+TGG - chr5.4:26832781-26832800 MS.gene032716:intron 20.0%
!!! GTTTCTAGGAAATTATAAAT+TGG - chr5.4:26834627-26834646 MS.gene032716:intron 20.0%
!!! TGTTAAATACTTACAGTTTT+AGG + chr5.4:26834892-26834911 None:intergenic 20.0%
!!! TTAAGTACTTTTGTTTATGA+TGG - chr5.4:26834057-26834076 MS.gene032716:intron 20.0%
!!! TTTATGAATTGTTTTTGAGA+AGG + chr5.4:26833883-26833902 None:intergenic 20.0%
! AAAAGATAGCAATTTGCAAT+AGG + chr5.4:26833287-26833306 None:intergenic 25.0%
! AAATAAGCTTCTAACTAAAC+CGG + chr5.4:26835019-26835038 None:intergenic 25.0%
! AAATACACTTTGTGAGAATT+AGG + chr5.4:26833573-26833592 None:intergenic 25.0%
! AACATCCTTCAATGTAAAAA+TGG - chr5.4:26835081-26835100 MS.gene032716:intron 25.0%
! AACTAATTAAAACTTCCACT+TGG + chr5.4:26833108-26833127 None:intergenic 25.0%
! ACATCCTTCAATGTAAAAAT+GGG - chr5.4:26835082-26835101 MS.gene032716:intron 25.0%
! ACTCAAAATAATGTGCAATT+TGG - chr5.4:26833236-26833255 MS.gene032716:intron 25.0%
! AGAATTTATGAAACAGCTTA+TGG + chr5.4:26832873-26832892 None:intergenic 25.0%
! ATATCAAACTCAAATACTCT+TGG + chr5.4:26833149-26833168 None:intergenic 25.0%
! CTAAAAATATTCCTTATGGT+TGG - chr5.4:26834592-26834611 MS.gene032716:CDS 25.0%
! CTCGTATTTACAAAGTAAAA+TGG - chr5.4:26835506-26835525 MS.gene032716:intron 25.0%
! CTTCTTATAAGTACAGAATT+AGG + chr5.4:26833787-26833806 None:intergenic 25.0%
! GAACTCAATGTAAAAATGTA+AGG + chr5.4:26834919-26834938 None:intergenic 25.0%
! TAAATCTATTTGCATTCTCA+TGG - chr5.4:26835604-26835623 MS.gene032716:CDS 25.0%
! TAACTAAATGGTTAAAGGTT+TGG - chr5.4:26832535-26832554 MS.gene032716:intron 25.0%
! TAGTTATACACACAAAAATG+TGG + chr5.4:26834458-26834477 None:intergenic 25.0%
! TGAGCTAAAAATATTCCTTA+TGG - chr5.4:26834588-26834607 MS.gene032716:CDS 25.0%
! TGGTATTATAATATGGAGAA+TGG - chr5.4:26833256-26833275 MS.gene032716:intron 25.0%
! TTAAAGCTCACACATTAAAA+GGG + chr5.4:26835341-26835360 None:intergenic 25.0%
! TTTCTAAACTTTCGTTGTTA+TGG - chr5.4:26834231-26834250 MS.gene032716:intron 25.0%
!! ATGATTAATAAGGGTTTGTT+TGG + chr5.4:26832921-26832940 None:intergenic 25.0%
!! GTATGGATTGAATAGATTAT+AGG - chr5.4:26833641-26833660 MS.gene032716:CDS 25.0%
!! GTTTTCTAATGGAATATTGA+TGG - chr5.4:26834309-26834328 MS.gene032716:intron 25.0%
!! TAGACCCTTTAATTTATACT+AGG + chr5.4:26835556-26835575 None:intergenic 25.0%
!! TTTTTGTGCAATTATTTGCA+TGG - chr5.4:26834116-26834135 MS.gene032716:intron 25.0%
!!! AGTGTTTTTAAAACAACACA+AGG - chr5.4:26832634-26832653 MS.gene032716:intron 25.0%
!!! TAAATACTTACAGTTTTAGG+AGG + chr5.4:26834889-26834908 None:intergenic 25.0%
!!! TGGAATTCAAGTTTTGTTAT+TGG - chr5.4:26833320-26833339 MS.gene032716:CDS 25.0%
!!! TTTACCCATTTTTACATTGA+AGG + chr5.4:26835089-26835108 None:intergenic 25.0%
AAAACATTAGGGAACAGTAA+AGG - chr5.4:26833409-26833428 MS.gene032716:intron 30.0%
AAAAGATTCAGAATGATTGG+TGG - chr5.4:26835155-26835174 MS.gene032716:intron 30.0%
AACTTTCGTTGTTATGGAAA+TGG - chr5.4:26834237-26834256 MS.gene032716:intron 30.0%
AAGTTCATAAACCAACCATA+AGG + chr5.4:26834606-26834625 None:intergenic 30.0%
ACAAATTGGTCAGTAAAGTT+GGG - chr5.4:26833725-26833744 MS.gene032716:intron 30.0%
ACACATTAAAAGGGTCATAA+AGG + chr5.4:26835332-26835351 None:intergenic 30.0%
ATTCTCATAAGTCTTTAAGC+CGG + chr5.4:26832607-26832626 None:intergenic 30.0%
ATTGAAAAATCTCCAAAACC+CGG + chr5.4:26832299-26832318 None:intergenic 30.0%
CCAAAAAGATTCAGAATGAT+TGG - chr5.4:26835152-26835171 MS.gene032716:intron 30.0%
CTCAATTCACCAAAATAAAG+CGG + chr5.4:26834967-26834986 None:intergenic 30.0%
CTGGGATAATTGTAATATTG+AGG - chr5.4:26834152-26834171 MS.gene032716:intron 30.0%
CTTAAAGCTCACACATTAAA+AGG + chr5.4:26835342-26835361 None:intergenic 30.0%
GAAAAAGGAGCAAAACATTA+GGG - chr5.4:26833398-26833417 MS.gene032716:intron 30.0%
GATAATTGTAATATTGAGGC+CGG - chr5.4:26834156-26834175 MS.gene032716:intron 30.0%
GGTAAAAGAAAATTCACAGT+AGG + chr5.4:26835311-26835330 None:intergenic 30.0%
TACAAATTGGTCAGTAAAGT+TGG - chr5.4:26833724-26833743 MS.gene032716:intron 30.0%
! ATTCAAACACACTTTAAGAG+TGG + chr5.4:26832563-26832582 None:intergenic 30.0%
! CCAATCATTCTGAATCTTTT+TGG + chr5.4:26835155-26835174 None:intergenic 30.0%
! GGTTTATGAACTTTGTTTCT+AGG - chr5.4:26834613-26834632 MS.gene032716:CDS 30.0%
! TTTTCAAAGTAAAAGGACCT+TGG + chr5.4:26833200-26833219 None:intergenic 30.0%
!! CCTTTTACTTTGAAAACAAC+AGG - chr5.4:26833204-26833223 MS.gene032716:intron 30.0%
!! TCTGAACTTGTTATATCACA+AGG - chr5.4:26834991-26835010 MS.gene032716:intron 30.0%
!!! AAGTTTTGTTATTGGACTAG+AGG - chr5.4:26833328-26833347 MS.gene032716:intron 30.0%
!!! CCTGTTGTTTTCAAAGTAAA+AGG + chr5.4:26833207-26833226 None:intergenic 30.0%
!!! GGAGAACCTTTTTTTTATTC+AGG - chr5.4:26834648-26834667 MS.gene032716:intron 30.0%
!!! TGGTTTTATCCGCTTTATTT+TGG - chr5.4:26834955-26834974 MS.gene032716:intron 30.0%
AAAGAATTCACACCTCTACT+TGG + chr5.4:26834732-26834751 None:intergenic 35.0%
AAAGGAGAAGAAAACAGTTC+AGG - chr5.4:26833427-26833446 MS.gene032716:intron 35.0%
ACATGGATGTAGTCTTTCTT+AGG + chr5.4:26833487-26833506 None:intergenic 35.0%
AGTCAAACTCTGAATTACCA+AGG - chr5.4:26833180-26833199 MS.gene032716:intron 35.0%
ATACGCTGAACAGAACTTTA+TGG - chr5.4:26833760-26833779 MS.gene032716:intron 35.0%
ATACTCTTTCTGCAAGACTA+TGG + chr5.4:26833540-26833559 None:intergenic 35.0%
ATGTAGTCTTTCTTAGGATG+TGG + chr5.4:26833481-26833500 None:intergenic 35.0%
CATGTTTCTTACTGTTCGAT+CGG + chr5.4:26835456-26835475 None:intergenic 35.0%
CTTTGTGAGAATTAGGAAGT+AGG + chr5.4:26833566-26833585 None:intergenic 35.0%
GAAGGGAAAAGATTAGTGAA+AGG - chr5.4:26834350-26834369 MS.gene032716:intron 35.0%
GGAAAAAGGAGCAAAACATT+AGG - chr5.4:26833397-26833416 MS.gene032716:intron 35.0%
TCAATGTGTAGTTAAGCCAT+AGG + chr5.4:26835195-26835214 None:intergenic 35.0%
TGAAAGGATGAAAACTCTTC+AGG - chr5.4:26834366-26834385 MS.gene032716:intron 35.0%
TGGTAATTCAGAGTTTGACT+AGG + chr5.4:26833180-26833199 None:intergenic 35.0%
TTCGTTGTTATGGAAATGGA+AGG - chr5.4:26834241-26834260 MS.gene032716:intron 35.0%
TTGAAAAATCTCCAAAACCC+GGG + chr5.4:26832298-26832317 None:intergenic 35.0%
! AAATGTGTTTCTACCAGCAA+TGG - chr5.4:26832395-26832414 MS.gene032716:intron 35.0%
! CATATGTTTGCTGATCAAAC+TGG + chr5.4:26835645-26835664 None:intergenic 35.0%
! CATGGTTCGTTTTCTTAACT+GGG - chr5.4:26834134-26834153 MS.gene032716:intron 35.0%
! CTTGTTATATCACAAGGAAC+CGG - chr5.4:26834997-26835016 MS.gene032716:intron 35.0%
! GAATTTGAGTTTGTGCAGAA+TGG - chr5.4:26833355-26833374 MS.gene032716:intron 35.0%
!! TGAGTTTTGTGAGACTGTTT+GGG + chr5.4:26832896-26832915 None:intergenic 35.0%
!! TTGAGTTTTGTGAGACTGTT+TGG + chr5.4:26832897-26832916 None:intergenic 35.0%
!!! GATTAAGCTGTTTTTCCAAG+TGG - chr5.4:26833090-26833109 MS.gene032716:intron 35.0%
!!! GGGTTTTGGAGATTTTTCAA+TGG - chr5.4:26832298-26832317 MS.gene032716:CDS 35.0%
AACACTTCAATACCAGGTGT+CGG + chr5.4:26834865-26834884 None:intergenic 40.0%
ACAAGCAAGCAATGTCTTTC+AGG + chr5.4:26833674-26833693 None:intergenic 40.0%
ACTCAGCTATGGCTATCTAT+AGG - chr5.4:26834186-26834205 MS.gene032716:intron 40.0%
AGCTTGTGAAGCAAATGGTA+TGG + chr5.4:26835677-26835696 None:intergenic 40.0%
AGTAAAATGGGCACAAATGC+TGG - chr5.4:26835519-26835538 MS.gene032716:intron 40.0%
ATCACTTCATCACCAAGTAG+AGG - chr5.4:26834717-26834736 MS.gene032716:intron 40.0%
GATTAGTAGATAGTAGCAGC+AGG - chr5.4:26835053-26835072 MS.gene032716:intron 40.0%
GCAACAAGGTATGGTTAACT+TGG - chr5.4:26834404-26834423 MS.gene032716:intron 40.0%
GTCAGTAAAGTTGGGAACTT+GGG - chr5.4:26833733-26833752 MS.gene032716:intron 40.0%
TAAATACGAGTGCGTGCATT+AGG + chr5.4:26835496-26835515 None:intergenic 40.0%
TCAGGTTATTGGGAAAGCTT+TGG - chr5.4:26834666-26834685 MS.gene032716:intron 40.0%
TCCTGCTGTAGGTAAAACAT+GGG - chr5.4:26835128-26835147 MS.gene032716:intron 40.0%
TTGTGAAGCAAATGGTATGG+CGG + chr5.4:26835674-26835693 None:intergenic 40.0%
TTTGTAGAAACTCCTGCTGT+AGG - chr5.4:26835117-26835136 MS.gene032716:intron 40.0%
! AAACAGTTCAGGAAAGCATG+CGG - chr5.4:26833438-26833457 MS.gene032716:intron 40.0%
! ACAAGGTATGGTTAACTTGG+TGG - chr5.4:26834407-26834426 MS.gene032716:intron 40.0%
! CTTGTAGCTTGTGAAGCAAA+TGG + chr5.4:26835682-26835701 None:intergenic 40.0%
! GCATGGTTCGTTTTCTTAAC+TGG - chr5.4:26834133-26834152 MS.gene032716:intron 40.0%
! GGAACGAAGTTTTTCACCTA+TGG - chr5.4:26835176-26835195 MS.gene032716:intron 40.0%
! GGAATATTGATGGACACTGT+TGG - chr5.4:26834319-26834338 MS.gene032716:intron 40.0%
!! ATTGCTTGCTTGTGTTGCTT+TGG - chr5.4:26833681-26833700 MS.gene032716:intron 40.0%
!! CTACTTGGTGATGAAGTGAT+TGG + chr5.4:26834717-26834736 None:intergenic 40.0%
AACCATACCTTGTTGCATCC+AGG + chr5.4:26834400-26834419 None:intergenic 45.0%
ACCATACCTTGTTGCATCCA+GGG + chr5.4:26834399-26834418 None:intergenic 45.0%
ACTCTTCAGGATTTAGTCCC+TGG - chr5.4:26834379-26834398 MS.gene032716:intron 45.0%
AGAGTGGTTACATATGCAGC+TGG - chr5.4:26835726-26835745 MS.gene032716:CDS 45.0%
AGCTGCATATGTAACCACTC+TGG + chr5.4:26835727-26835746 None:intergenic 45.0%
AGTAGATAGTAGCAGCAGGT+AGG - chr5.4:26835057-26835076 MS.gene032716:intron 45.0%
CCGGCAAATTAGAAGAGAGA+CGG - chr5.4:26832358-26832377 MS.gene032716:intron 45.0%
CCTGCTGTAGGTAAAACATG+GGG - chr5.4:26835129-26835148 MS.gene032716:intron 45.0%
CTCCTGCTGTAGGTAAAACA+TGG - chr5.4:26835127-26835146 MS.gene032716:intron 45.0%
GAACAGAAACCACTGAACCA+TGG - chr5.4:26832335-26832354 MS.gene032716:CDS 45.0%
GAGTGGTTACATATGCAGCT+GGG - chr5.4:26835727-26835746 MS.gene032716:CDS 45.0%
GAGTTTGTGCAGAATGGTGA+TGG - chr5.4:26833361-26833380 MS.gene032716:intron 45.0%
GGAGGAAACACTTCAATACC+AGG + chr5.4:26834871-26834890 None:intergenic 45.0%
GGTCAGTAAAGTTGGGAACT+TGG - chr5.4:26833732-26833751 MS.gene032716:intron 45.0%
GTAAATTCAAGACCGACACC+TGG - chr5.4:26834850-26834869 MS.gene032716:intron 45.0%
GTAGATAGTAGCAGCAGGTA+GGG - chr5.4:26835058-26835077 MS.gene032716:intron 45.0%
TTTAGTCCCTGGATGCAACA+AGG - chr5.4:26834390-26834409 MS.gene032716:intron 45.0%
! ATTGATGGACACTGTTGGAC+AGG - chr5.4:26834324-26834343 MS.gene032716:intron 45.0%
! CCGTCTCTCTTCTAATTTGC+CGG + chr5.4:26832361-26832380 None:intergenic 45.0%
! TGTGTTTCTACCAGCAATGG+TGG - chr5.4:26832398-26832417 MS.gene032716:intron 45.0%
!! TTTGTGCAGAATGGTGATGG+TGG - chr5.4:26833364-26833383 MS.gene032716:intron 45.0%
ACATCCATGTCCGAGCTAGA+AGG - chr5.4:26833497-26833516 MS.gene032716:intron 50.0%
AGAAACCACTGAACCATGGC+CGG - chr5.4:26832339-26832358 MS.gene032716:CDS 50.0%
ATCCATGTCCGAGCTAGAAG+GGG - chr5.4:26833499-26833518 MS.gene032716:intron 50.0%
ATGGGCAATTACCAAGCCGT+TGG + chr5.4:26832438-26832457 None:intergenic 50.0%
CATCCATGTCCGAGCTAGAA+GGG - chr5.4:26833498-26833517 MS.gene032716:intron 50.0%
GTTTCTACCAGCAATGGTGG+TGG - chr5.4:26832401-26832420 MS.gene032716:intron 50.0%
TCCCTGGATGCAACAAGGTA+TGG - chr5.4:26834395-26834414 MS.gene032716:intron 50.0%
TGGTTACATATGCAGCTGGG+AGG - chr5.4:26835730-26835749 MS.gene032716:CDS 50.0%
TTACATATGCAGCTGGGAGG+TGG - chr5.4:26835733-26835752 MS.gene032716:CDS 50.0%
! CCCCATGTTTTACCTACAGC+AGG + chr5.4:26835132-26835151 None:intergenic 50.0%
! CTCTTCTAATTTGCCGGCCA+TGG + chr5.4:26832355-26832374 None:intergenic 50.0%
! GCTACAAGAGAGTATAGCCG+AGG - chr5.4:26835694-26835713 MS.gene032716:CDS 50.0%
! TAGCTTGACCCCTTCTAGCT+CGG + chr5.4:26833510-26833529 None:intergenic 50.0%
!! GTGGTGGTGGTGATGGAAAA+AGG - chr5.4:26833383-26833402 MS.gene032716:intron 50.0%
ACACTGTTGGACAGGCTCGA+AGG - chr5.4:26834332-26834351 MS.gene032716:intron 55.0%
ATCTCCGGTAGGTGATACGC+TGG + chr5.4:26832248-26832267 None:intergenic 55.0%
ATTTGCCGGCCATGGTTCAG+TGG + chr5.4:26832347-26832366 None:intergenic 55.0%
CACTGTTGGACAGGCTCGAA+GGG - chr5.4:26834333-26834352 MS.gene032716:intron 55.0%
CCAAGCCGTTGGAATTGCCA+CGG + chr5.4:26832427-26832446 None:intergenic 55.0%
CCATAGCTGAGTCAGTGTGC+CGG + chr5.4:26834178-26834197 None:intergenic 55.0%
CGTATCACCTACCGGAGATC+TGG - chr5.4:26832249-26832268 MS.gene032716:CDS 55.0%
GGATCCAGCGTATCACCTAC+CGG - chr5.4:26832241-26832260 MS.gene032716:CDS 55.0%
! ACCACTCTGGTGATGCACCT+CGG + chr5.4:26835714-26835733 None:intergenic 55.0%
!! CAGAATGGTGATGGTGGTGG+TGG - chr5.4:26833370-26833389 MS.gene032716:intron 55.0%
!! GTGCAGAATGGTGATGGTGG+TGG - chr5.4:26833367-26833386 MS.gene032716:intron 55.0%
CCGTGGCAATTCCAACGGCT+TGG - chr5.4:26832424-26832443 MS.gene032716:intron 60.0%
GGTGGCCGTGGCAATTCCAA+CGG - chr5.4:26832419-26832438 MS.gene032716:intron 60.0%
TGGACTGCCAGATCTCCGGT+AGG + chr5.4:26832259-26832278 None:intergenic 60.0%
! GCTCTGGACTGCCAGATCTC+CGG + chr5.4:26832263-26832282 None:intergenic 60.0%
!! CAGTCCAGAGCACCGCATCT+CGG - chr5.4:26832272-26832291 MS.gene032716:CDS 60.0%
!! CCGGCACACTGACTCAGCTA+TGG - chr5.4:26834175-26834194 MS.gene032716:intron 60.0%
!! GACCCCTTCTAGCTCGGACA+TGG + chr5.4:26833504-26833523 None:intergenic 60.0%
!! GGTGATGGTGGTGGTGGTGA+TGG - chr5.4:26833376-26833395 MS.gene032716:intron 60.0%
CCAAAACCCGGGCCGAGATG+CGG + chr5.4:26832287-26832306 None:intergenic 65.0%
GCCGAGGTGCATCACCAGAG+TGG - chr5.4:26835710-26835729 MS.gene032716:CDS 65.0%
!! ACCAGCAATGGTGGTGGCCG+TGG - chr5.4:26832407-26832426 MS.gene032716:intron 65.0%
GCCACGGCCACCACCATTGC+TGG + chr5.4:26832411-26832430 None:intergenic 70.0%
! CCGCATCTCGGCCCGGGTTT+TGG - chr5.4:26832284-26832303 MS.gene032716:CDS 70.0%
!! AGAGCACCGCATCTCGGCCC+GGG - chr5.4:26832278-26832297 MS.gene032716:CDS 70.0%
!! CAGAGCACCGCATCTCGGCC+CGG - chr5.4:26832277-26832296 MS.gene032716:CDS 70.0%
CGGGCCGAGATGCGGTGCTC+TGG + chr5.4:26832279-26832298 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 26832239 26835774 26832239 ID=MS.gene032716
chr5.4 mRNA 26832239 26835774 26832239 ID=MS.gene032716.t1;Parent=MS.gene032716
chr5.4 exon 26835568 26835774 26835568 ID=MS.gene032716.t1.exon1;Parent=MS.gene032716.t1
chr5.4 CDS 26835568 26835774 26835568 ID=cds.MS.gene032716.t1;Parent=MS.gene032716.t1
chr5.4 exon 26834458 26834640 26834458 ID=MS.gene032716.t1.exon2;Parent=MS.gene032716.t1
chr5.4 CDS 26834458 26834640 26834458 ID=cds.MS.gene032716.t1;Parent=MS.gene032716.t1
chr5.4 exon 26833602 26833667 26833602 ID=MS.gene032716.t1.exon3;Parent=MS.gene032716.t1
chr5.4 CDS 26833602 26833667 26833602 ID=cds.MS.gene032716.t1;Parent=MS.gene032716.t1
chr5.4 exon 26833275 26833343 26833275 ID=MS.gene032716.t1.exon4;Parent=MS.gene032716.t1
chr5.4 CDS 26833275 26833343 26833275 ID=cds.MS.gene032716.t1;Parent=MS.gene032716.t1
chr5.4 exon 26833116 26833187 26833116 ID=MS.gene032716.t1.exon5;Parent=MS.gene032716.t1
chr5.4 CDS 26833116 26833187 26833116 ID=cds.MS.gene032716.t1;Parent=MS.gene032716.t1
chr5.4 exon 26832239 26832367 26832239 ID=MS.gene032716.t1.exon6;Parent=MS.gene032716.t1
chr5.4 CDS 26832239 26832367 26832239 ID=cds.MS.gene032716.t1;Parent=MS.gene032716.t1
Gene Sequence

>MS.gene032716

ATGGATCCAGCGTATCACCTACCGGAGATCTGGCAGTCCAGAGCACCGCATCTCGGCCCGGGTTTTGGAGATTTTTCAATGGAAGATCTCACTTCTGAACAGAAACCACTGAACCATGGCCGGCAAATTAGAAGAGAGACGGTTAAAGATTCAGTTAAATGTGTTTCTACCAGCAATGGTGGTGGCCGTGGCAATTCCAACGGCTTGGTAATTGCCCATTCAATTATGTGATGTTAATTATGAAAGAAAAAATATATATTGTCTATGAATTTAGTTCTACTAGAAAATTGGTAGTATAACTAAATGGTTAAAGGTTTGGTTCCACTCTTAAAGTGTGTTTGAATTTATTTATTTGAGTTTATTTACCGGCTTAAAGACTTATGAGAATGTTCGAGAGTGTTTTTAAAACAACACAAGGTCTGTTTGTTTGTATAAACAACTTATTTGTAGCTTATAGCACAAGTGCTTAAGTGTAAGCTTGCGTAAGCTATTGTGACAGCAAAAGATTAGATAACGTTAAATTGTTTTTGTATATGTGGTAAGTTGTTTTTATAAGCTATAATGGAAAGCTTATGAAGATTGATGTCATGAGTTGTTTTTATAAATTATATTGGAAAACTTATGAAAATTGCCATAAGCTGTTTCATAAATTCTCCCAAACAGTCTCACAAAACTCAATCCAAACAAACCCTTATTAATCATTAATAAGTTGTTCTGTAAGCTCTCTATGTGATAGCTTATGAAAACAACTTATAGCTGATATGAAAGTAGCTTTATTTCATTTAATTTTTATTATAGAAATTACTTATACATAAGCAGTTAAGTGATAAGTGCTTATGTTATAAAACTTTGATTAAGCTGTTTTTCCAAGTGGAAGTTTTAATTAGTTTTAGTAAAATTGAATTGACCAAGAGTATTTGAGTTTGATATGTAGCAATCCTAGTCAAACTCTGAATTACCAAGGTCCTTTTACTTTGAAAACAACAGGAGAGTTCAGACTCAAAATAATGTGCAATTTGGTATTATAATATGGAGAATGGATCTACCTATTGCAAATTGCTATCTTTTTTTTTTTTTTGGTTGGAATTCAAGTTTTGTTATTGGACTAGAGGTGTTGAATTTGAGTTTGTGCAGAATGGTGATGGTGGTGGTGGTGATGGAAAAAGGAGCAAAACATTAGGGAACAGTAAAGGAGAAGAAAACAGTTCAGGAAAGCATGCGGAAGAAACTAGTGATGAGCCACATCCTAAGAAAGACTACATCCATGTCCGAGCTAGAAGGGGTCAAGCTACTGATAGCCATAGTCTTGCAGAAAGAGTATTTTCCTACTTCCTAATTCTCACAAAGTGTATTTTTTATATGGTGTTGAATTTCTGATGTTCAAATAATGTTTTATTGTTATGTATGGATTGAATAGATTATAGGAATTGAACCTGAAAGACATTGCTTGCTTGTGTTGCTTTGGTCTTTTCAAATTTTTGTTTTTACAAATTGGTCAGTAAAGTTGGGAACTTGGGTTTGATACGCTGAACAGAACTTTATGGACCTAATTCTGTACTTATAAGAAGAAAAATACTCATATTTAGTAGTCTCAACTCTCAGAGAAACACAATTTACTACTTTTACTATATTTAATGATGTCCTTCTCAAAAACAATTCATAAATCAATATAGGTTTTATTTTATATAATTAAAATGCTATCTTATTCTCATCGAACAAGTTGTTATAAATGACGCTTTTGAGAACGTACATATTTTTTATGAGACTAAGAAGATGCTCTTGACTAAGTTTCTTATTCAGTATGTATGAACTTTGAAGTTAAGTACTTTTGTTTATGATGGTTGTTTTGCTTAATAGTTGTTTTAGTTTTAGGTAAATTTTTGTGCAATTATTTGCATGGTTCGTTTTCTTAACTGGGATAATTGTAATATTGAGGCCGGCACACTGACTCAGCTATGGCTATCTATAGGACAAGTCACGTTATCTGATAATTTTCTAAACTTTCGTTGTTATGGAAATGGAAGGAAATATTGAATTATAGAATATTTTGCAATTAGAGATTTTGATTTAGTTTTCTAATGGAATATTGATGGACACTGTTGGACAGGCTCGAAGGGAAAAGATTAGTGAAAGGATGAAAACTCTTCAGGATTTAGTCCCTGGATGCAACAAGGTATGGTTAACTTGGTGGCTGCTGAGTTTTGTCTTTGCTCTCACCACATTTTTGTGTGTATAACTAAGAAGAAAAAATAAGCATAAAGAAAGAAGAATAAAAGCTGTTGCTTTTCATATGAAAAGAAAAGAACAAAATCATTGCTGAATACTTTTGTATGTAAATCTCTTATAAGATGAGCTAAAAATATTCCTTATGGTTGGTTTATGAACTTTGTTTCTAGGAAATTATAAATTGGAGAACCTTTTTTTTATTCAGGTTATTGGGAAAGCTTTGGTCCTTGATGAAATAATCAACTATATCCAATCACTTCATCACCAAGTAGAGGTGTGAATTCTTTATCTGATGCTGTCATTCTTTGTGAAAATAATATAATGCTTTGTGAAAATAATGTAATTTTACTTTACATCACAGTTTTTGTCGATGAAGCTTGAAGCAGTAAATTCAAGACCGACACCTGGTATTGAAGTGTTTCCTCCTAAAACTGTAAGTATTTAACAGCATCCTTACATTTTTACATTGAGTTCTATATATTCTAAAAGTTGGTTTTATCCGCTTTATTTTGGTGAATTGAGTATATCTGAACTTGTTATATCACAAGGAACCGGTTTAGTTAGAAGCTTATTTTATGCACACTATATGATTAGTAGATAGTAGCAGCAGGTAGGGAACATCCTTCAATGTAAAAATGGGTAAATAGTTTAGTTTGTAGAAACTCCTGCTGTAGGTAAAACATGGGGCCAAAAAGATTCAGAATGATTGGTGGAACGAAGTTTTTCACCTATGGCTTAACTACACATTGATCAAATATAGTTTAGACAAAATGTGATTTTGATTTCTGAATAGTTTTTTTGAGCGATTTTAGTCATTTAATTTTATATATTAGCAAAAATGGACCTACTGTGAATTTTCTTTTACCTTTATGACCCTTTTAATGTGTGAGCTTTAAGTAAAAGAATGTCTAAAAAACTATAATCAGTTCAATTTATGAATCTTTTTACATATGTAAATTGAAGAATTGTATATGTAAATACAAAATGGCCGATCGAACAGTAAGAAACATGCAGACAAAAATGTCTAACCTAATGCACGCACTCGTATTTACAAAGTAAAATGGGCACAAATGCTGGCAAAAATTAGACCTAGTATAAATTAAAGGGTCTAAAGTGCAATCAAGTTTTCACTTTTTAGCTAAATCTATTTGCATTCTCATGGACATCAACTTGTATTCCAGTTTGATCAGCAAACATATGATACAACCGCCATACCATTTGCTTCACAAGCTACAAGAGAGTATAGCCGAGGTGCATCACCAGAGTGGTTACATATGCAGCTGGGAGGTGGTTTTGAAAGAACAGCATAA
Protein sequence

>MS.gene032716.t1

MDPAYHLPEIWQSRAPHLGPGFGDFSMEDLTSEQKPLNHGRQIRRETVKDSVKCVSTSNGGGRGNSNGLNGDGGGGDGKRSKTLGNSKGEENSSGKHAEETSDEPHPKKDYIHVRARRGQATDSHSLAERARREKISERMKTLQDLVPGCNKVIGKALVLDEIINYIQSLHHQVEFLSMKLEAVNSRPTPGIEVFPPKTFDQQTYDTTAIPFASQATREYSRGASPEWLHMQLGGGFERTA