AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene032886

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032886.t1 MTR_5g040420 92.020 401 21 2 1 400 1 391 0.0 739
MS.gene032886.t1 MTR_8g467490 62.791 430 95 15 1 400 1 395 1.75e-171 484
MS.gene032886.t1 MTR_6g011860 46.189 433 158 16 1 400 1 391 1.05e-113 338
MS.gene032886.t1 MTR_5g090970 53.390 236 96 5 6 234 10 238 5.25e-79 246
MS.gene032886.t1 MTR_5g090970 52.966 236 96 6 6 234 10 237 1.39e-76 240
MS.gene032886.t1 MTR_2g068880 64.740 173 53 4 6 172 16 186 1.81e-74 234
MS.gene032886.t1 MTR_2g068920 62.857 175 51 4 11 175 18 188 1.03e-72 229
MS.gene032886.t1 MTR_4g089135 50.279 179 72 2 14 176 15 192 1.67e-60 199
MS.gene032886.t1 MTR_2g080010 51.786 168 68 2 16 175 17 179 1.44e-59 197
MS.gene032886.t1 MTR_4g134460 54.938 162 62 3 12 173 52 202 1.84e-59 199
MS.gene032886.t1 MTR_2157s0010 45.588 204 104 4 16 215 10 210 2.18e-58 191
MS.gene032886.t1 MTR_3g088110 52.273 176 75 3 16 191 9 175 3.85e-58 191
MS.gene032886.t1 MTR_7g085220 46.919 211 92 5 16 219 10 207 4.67e-58 193
MS.gene032886.t1 MTR_2g093810 51.163 172 80 2 1 172 1 168 5.93e-58 192
MS.gene032886.t1 MTR_5g041940 39.695 262 140 8 16 269 5 256 1.52e-57 189
MS.gene032886.t1 MTR_8g094580 53.503 157 66 2 16 172 9 158 4.84e-56 186
MS.gene032886.t1 MTR_2g079990 53.039 181 74 5 16 196 18 187 2.54e-55 186
MS.gene032886.t1 MTR_3g096920 50.296 169 76 2 16 184 9 169 7.79e-55 183
MS.gene032886.t1 MTR_4g081870 54.037 161 64 3 16 174 11 163 9.73e-55 182
MS.gene032886.t1 MTR_7g100990 52.500 160 72 2 16 175 13 168 6.30e-54 182
MS.gene032886.t1 MTR_4g036030 48.256 172 74 3 14 182 7 166 3.72e-53 180
MS.gene032886.t1 MTR_8g076110 44.103 195 92 5 10 200 2 183 4.22e-53 179
MS.gene032886.t1 MTR_2g079990 48.259 201 81 4 16 196 18 215 8.56e-53 180
MS.gene032886.t1 MTR_8g059170 53.614 166 68 4 16 181 16 172 1.15e-52 179
MS.gene032886.t1 MTR_5g012080 47.429 175 77 4 14 184 7 170 3.86e-52 178
MS.gene032886.t1 MTR_5g021710 45.161 186 85 5 8 188 2 175 9.70e-52 177
MS.gene032886.t1 MTR_4g108760 49.153 177 76 4 8 182 13 177 1.02e-51 177
MS.gene032886.t1 MTR_3g096920 58.915 129 50 1 16 144 9 134 1.27e-51 176
MS.gene032886.t1 MTR_2g064090 50.000 166 72 4 16 179 8 164 1.33e-51 176
MS.gene032886.t1 MTR_3g435150 53.012 166 70 3 8 173 10 167 2.39e-51 174
MS.gene032886.t1 MTR_4g101680 47.337 169 74 3 14 179 7 163 1.34e-50 174
MS.gene032886.t1 MTR_6g012670 53.797 158 65 3 16 173 22 171 7.09e-50 171
MS.gene032886.t1 MTR_4g075980 47.590 166 73 2 11 175 12 164 2.42e-49 169
MS.gene032886.t1 MTR_6g477900 47.799 159 71 3 16 172 8 156 1.61e-48 165
MS.gene032886.t1 MTR_2g078700 47.879 165 80 2 11 175 20 178 2.99e-48 168
MS.gene032886.t1 MTR_4g035590 49.390 164 67 3 14 174 8 158 3.16e-48 167
MS.gene032886.t1 MTR_6g084430 45.930 172 79 4 10 179 1 160 5.53e-48 166
MS.gene032886.t1 MTR_7g085260 46.154 182 86 3 5 182 8 181 5.57e-48 168
MS.gene032886.t1 MTR_6g032770 48.235 170 76 4 9 174 11 172 2.86e-47 166
MS.gene032886.t1 MTR_3g064580 43.386 189 93 6 16 202 8 184 4.59e-47 171
MS.gene032886.t1 MTR_1g096430 39.013 223 105 6 10 227 3 199 5.84e-47 164
MS.gene032886.t1 MTR_3g109340 46.591 176 79 3 1 175 12 173 9.29e-47 164
MS.gene032886.t1 MTR_3g109340 47.429 175 80 3 1 175 12 174 1.06e-46 164
MS.gene032886.t1 MTR_2g062730 41.799 189 94 4 13 196 9 186 4.23e-46 162
MS.gene032886.t1 MTR_5g076850 46.250 160 74 3 16 173 8 157 5.03e-46 167
MS.gene032886.t1 MTR_5g014300 46.951 164 69 4 16 172 8 160 6.74e-46 161
MS.gene032886.t1 MTR_7g005280 48.295 176 77 3 1 175 1 163 9.76e-46 158
MS.gene032886.t1 MTR_8g024480 46.429 168 78 4 14 174 15 177 1.55e-45 162
MS.gene032886.t1 MTR_4g098630 36.755 302 165 10 16 308 8 292 1.58e-45 159
MS.gene032886.t1 MTR_3g070030 45.783 166 83 3 17 182 22 180 3.55e-45 159
MS.gene032886.t1 MTR_5g069030 48.148 162 72 4 17 176 28 179 3.66e-45 165
MS.gene032886.t1 MTR_1g008740 44.253 174 86 3 1 173 1 164 6.06e-45 159
MS.gene032886.t1 MTR_1g008740 44.253 174 86 3 1 173 15 178 9.20e-45 159
MS.gene032886.t1 MTR_1g097300 45.181 166 79 3 15 178 20 175 1.15e-44 163
MS.gene032886.t1 MTR_3g096140 43.195 169 84 4 12 178 5 163 1.84e-44 155
MS.gene032886.t1 MTR_3g093050 42.029 207 99 6 17 219 25 214 2.52e-44 162
MS.gene032886.t1 MTR_1g069805 37.156 218 115 4 16 231 12 209 4.04e-44 154
MS.gene032886.t1 MTR_3g093050 42.029 207 99 6 17 219 25 214 4.27e-44 162
MS.gene032886.t1 MTR_7g011130 48.503 167 73 5 17 174 22 184 4.37e-44 157
MS.gene032886.t1 MTR_3g116070 52.448 143 66 2 3 143 11 153 4.76e-44 156
MS.gene032886.t1 MTR_2g064470 47.239 163 75 4 10 172 7 158 7.27e-44 155
MS.gene032886.t1 MTR_3g096140 42.690 171 86 4 12 180 5 165 7.52e-44 156
MS.gene032886.t1 MTR_8g063550 42.604 169 85 4 14 180 6 164 9.91e-44 155
MS.gene032886.t1 MTR_8g063550 42.604 169 85 4 14 180 6 164 1.22e-43 157
MS.gene032886.t1 MTR_8g063550 42.604 169 85 4 14 180 6 164 1.48e-43 157
MS.gene032886.t1 MTR_7g011120 46.584 161 79 3 17 174 11 167 1.52e-43 154
MS.gene032886.t1 MTR_3g093040 42.353 170 85 5 10 176 103 262 4.24e-42 150
MS.gene032886.t1 MTR_1g090723 44.048 168 81 5 16 180 10 167 5.77e-42 156
MS.gene032886.t1 MTR_8g093580 40.828 169 88 3 14 180 6 164 1.07e-41 153
MS.gene032886.t1 MTR_1g090723 43.452 168 81 5 16 180 10 166 4.03e-41 154
MS.gene032886.t1 MTR_1g090723 43.452 168 81 5 16 180 10 166 4.66e-41 153
MS.gene032886.t1 MTR_1g090720 43.678 174 76 4 14 177 42 203 8.94e-41 150
MS.gene032886.t1 MTR_7g097090 41.935 155 78 1 16 170 12 154 1.25e-40 145
MS.gene032886.t1 MTR_0036s0150 44.048 168 80 6 16 180 7 163 6.71e-40 149
MS.gene032886.t1 MTR_8g099750 44.156 154 81 2 16 169 16 164 2.76e-38 137
MS.gene032886.t1 MTR_2g086880 40.994 161 77 4 14 173 18 161 2.17e-36 139
MS.gene032886.t1 MTR_2g086880 40.994 161 77 4 14 173 18 161 2.19e-36 140
MS.gene032886.t1 MTR_3g098810 43.210 162 86 3 16 175 16 173 5.84e-36 132
MS.gene032886.t1 MTR_3g070040 41.358 162 86 4 18 179 12 164 4.07e-34 129
MS.gene032886.t1 MTR_3g096140 39.869 153 80 4 30 180 2 144 7.60e-34 129
MS.gene032886.t1 MTR_3g098810 44.521 146 77 2 1 144 1 144 1.48e-33 123
MS.gene032886.t1 MTR_8g023840 45.865 133 68 3 17 146 14 145 1.84e-33 129
MS.gene032886.t1 MTR_8g094580 51.351 111 47 2 62 172 1 104 1.67e-32 122
MS.gene032886.t1 MTR_4g052620 43.382 136 71 3 10 140 1 135 1.95e-32 123
MS.gene032886.t1 MTR_8g023860 46.269 134 67 4 10 140 9 140 6.45e-32 125
MS.gene032886.t1 MTR_2g086690 45.865 133 61 5 16 140 6 135 9.06e-32 121
MS.gene032886.t1 MTR_7g105170 35.976 164 95 5 16 173 6 165 2.16e-31 120
MS.gene032886.t1 MTR_8g023900 33.663 202 117 4 17 215 196 383 1.33e-29 119
MS.gene032886.t1 MTR_8g023900 35.625 160 88 4 17 173 15 162 9.99e-27 111
MS.gene032886.t1 MTR_4g094302 36.306 157 90 2 16 172 13 159 1.81e-28 110
MS.gene032886.t1 MTR_8g023930 32.995 197 115 4 17 210 27 209 1.27e-27 114
MS.gene032886.t1 MTR_4g094302 39.683 126 68 1 16 141 13 130 5.14e-26 103
MS.gene032886.t1 MTR_7g070140 48.052 77 40 0 67 143 17 93 1.44e-20 87.4
MS.gene032886.t1 MTR_8g093790 34.132 167 80 6 16 182 12 148 1.59e-19 85.9
MS.gene032886.t1 MTR_8g023880 32.759 174 80 7 17 172 10 164 8.35e-19 85.9
MS.gene032886.t1 MTR_7g083330 34.783 138 83 5 11 145 14 147 8.35e-19 84.3
MS.gene032886.t1 MTR_7g083370 32.540 126 77 5 17 139 13 133 1.05e-16 77.0
MS.gene032886.t1 MTR_7g083360 32.374 139 87 5 12 147 7 141 2.39e-16 76.3
MS.gene032886.t1 MTR_1g087190 60.870 46 17 1 16 60 7 52 1.64e-13 65.1
MS.gene032886.t1 MTR_7g070150 41.892 74 32 1 111 184 7 69 7.85e-13 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032886.t1 AT1G26870 55.828 326 123 7 2 313 3 321 7.48e-110 329
MS.gene032886.t1 AT5G39820 68.342 199 49 3 2 186 8 206 9.71e-99 298
MS.gene032886.t1 AT2G43000 64.118 170 52 2 6 175 10 170 1.08e-75 236
MS.gene032886.t1 AT3G12910 46.094 256 128 5 6 254 13 265 2.09e-66 213
MS.gene032886.t1 AT2G02450 55.625 160 60 3 13 172 50 198 8.01e-60 200
MS.gene032886.t1 AT3G04070 53.672 177 71 4 16 184 12 185 6.79e-59 195
MS.gene032886.t1 AT3G15510 52.096 167 67 2 18 176 21 182 7.32e-58 193
MS.gene032886.t1 AT1G61110 54.268 164 70 2 16 175 18 180 1.01e-56 189
MS.gene032886.t1 AT3G04070 49.223 193 71 4 16 184 12 201 1.96e-56 189
MS.gene032886.t1 AT1G01720 52.121 165 72 2 16 180 9 166 1.12e-55 185
MS.gene032886.t1 AT1G69490 52.174 161 71 3 16 176 11 165 2.19e-55 184
MS.gene032886.t1 AT3G15500 53.571 168 68 4 16 183 16 173 2.12e-54 183
MS.gene032886.t1 AT4G27410 49.724 181 79 4 16 196 16 184 2.15e-54 182
MS.gene032886.t1 AT1G77450 51.829 164 71 2 16 179 12 167 2.17e-54 181
MS.gene032886.t1 AT5G63790 44.907 216 105 6 12 222 47 253 3.29e-54 182
MS.gene032886.t1 AT5G63790 44.907 216 105 6 12 222 57 263 3.96e-54 182
MS.gene032886.t1 AT1G52890 52.663 169 70 4 16 184 16 174 6.14e-54 181
MS.gene032886.t1 AT5G08790 52.727 165 71 3 12 175 4 162 6.59e-54 180
MS.gene032886.t1 AT4G36160 48.876 178 76 4 14 188 10 175 1.72e-53 182
MS.gene032886.t1 AT4G36160 48.876 178 76 4 14 188 10 175 1.72e-53 182
MS.gene032886.t1 AT4G36160 48.876 178 76 4 14 188 14 179 1.87e-53 182
MS.gene032886.t1 AT5G07680 43.172 227 109 5 4 220 9 225 4.67e-53 179
MS.gene032886.t1 AT5G39610 43.162 234 113 5 1 232 9 224 9.87e-53 177
MS.gene032886.t1 AT1G52880 55.357 168 65 3 18 179 21 184 1.52e-52 178
MS.gene032886.t1 AT1G76420 46.277 188 87 2 2 189 15 188 2.72e-52 178
MS.gene032886.t1 AT5G07680 44.186 215 102 4 16 220 5 211 4.19e-52 177
MS.gene032886.t1 AT5G61430 49.419 172 73 4 4 173 8 167 7.12e-52 177
MS.gene032886.t1 AT2G18060 47.191 178 78 5 14 188 9 173 9.69e-52 177
MS.gene032886.t1 AT2G18060 47.191 178 78 5 14 188 9 173 9.69e-52 177
MS.gene032886.t1 AT2G17040 51.515 165 66 4 12 175 4 155 1.77e-51 174
MS.gene032886.t1 AT5G62380 49.398 166 69 4 14 176 7 160 3.30e-51 175
MS.gene032886.t1 AT5G62380 49.398 166 69 4 14 176 7 160 3.30e-51 175
MS.gene032886.t1 AT1G12260 49.112 169 71 4 14 179 7 163 4.61e-51 175
MS.gene032886.t1 AT1G12260 49.112 169 71 4 14 179 7 163 4.91e-51 176
MS.gene032886.t1 AT3G18400 49.102 167 74 3 10 176 1 156 2.77e-50 172
MS.gene032886.t1 AT4G27410 45.455 198 79 5 16 196 16 201 4.27e-50 171
MS.gene032886.t1 AT4G10350 49.390 164 70 3 14 174 9 162 5.48e-50 172
MS.gene032886.t1 AT1G62700 40.991 222 109 5 14 232 7 209 1.23e-49 172
MS.gene032886.t1 AT1G62700 40.991 222 109 5 14 232 7 209 1.23e-49 172
MS.gene032886.t1 AT2G24430 46.154 169 82 1 8 176 10 169 1.26e-49 170
MS.gene032886.t1 AT2G24430 46.154 169 82 1 8 176 10 169 1.26e-49 170
MS.gene032886.t1 AT5G18270 48.837 172 76 4 5 174 13 174 1.28e-49 171
MS.gene032886.t1 AT3G17730 50.311 161 64 4 16 172 8 156 1.30e-49 168
MS.gene032886.t1 AT3G04060 48.851 174 76 4 1 172 9 171 1.84e-49 171
MS.gene032886.t1 AT3G29035 51.111 180 73 6 3 179 15 182 2.68e-49 169
MS.gene032886.t1 AT5G66300 34.985 323 154 12 14 324 12 290 4.70e-49 168
MS.gene032886.t1 AT5G18270 48.256 172 77 4 5 174 13 174 7.64e-49 169
MS.gene032886.t1 AT4G17980 47.170 159 76 2 16 172 8 160 3.46e-48 165
MS.gene032886.t1 AT4G17980 47.170 159 76 2 16 172 8 160 3.55e-48 166
MS.gene032886.t1 AT1G71930 40.367 218 111 7 16 229 11 213 4.20e-48 166
MS.gene032886.t1 AT1G71930 40.367 218 111 7 16 229 11 213 4.20e-48 166
MS.gene032886.t1 AT1G33280 48.780 164 68 3 14 174 8 158 8.05e-48 165
MS.gene032886.t1 AT1G65910 48.125 160 71 3 16 173 8 157 1.27e-47 172
MS.gene032886.t1 AT3G03200 45.251 179 84 6 16 190 8 176 2.65e-47 168
MS.gene032886.t1 AT3G10500 46.746 169 78 4 14 180 9 167 3.00e-47 169
MS.gene032886.t1 AT2G46770 45.614 171 79 4 14 174 16 182 3.82e-47 165
MS.gene032886.t1 AT5G53950 47.368 171 84 1 12 182 15 179 6.19e-47 165
MS.gene032886.t1 AT1G54330 48.193 166 71 4 16 179 8 160 1.20e-46 162
MS.gene032886.t1 AT5G17260 46.875 160 72 4 16 172 8 157 1.84e-46 166
MS.gene032886.t1 AT3G15170 48.485 165 78 3 11 174 16 174 6.62e-46 160
MS.gene032886.t1 AT5G13180 48.125 160 71 2 16 175 16 163 6.73e-46 159
MS.gene032886.t1 AT1G79580 46.341 164 73 3 14 174 17 168 9.13e-46 162
MS.gene032886.t1 AT1G79580 46.341 164 73 3 14 174 17 168 9.13e-46 162
MS.gene032886.t1 AT1G79580 46.341 164 73 3 14 174 17 168 9.13e-46 162
MS.gene032886.t1 AT1G79580 46.341 164 73 3 14 174 17 168 9.13e-46 162
MS.gene032886.t1 AT1G79580 46.341 164 73 3 14 174 17 168 9.13e-46 162
MS.gene032886.t1 AT3G10490 45.614 171 72 4 14 177 27 183 1.53e-45 157
MS.gene032886.t1 AT3G61910 45.562 169 82 5 14 174 11 177 2.43e-45 159
MS.gene032886.t1 AT3G10480 45.833 168 76 4 14 177 27 183 3.39e-45 162
MS.gene032886.t1 AT3G10480 44.828 174 68 4 14 177 27 182 3.57e-45 162
MS.gene032886.t1 AT1G56010 49.375 160 69 5 16 172 21 171 3.76e-45 159
MS.gene032886.t1 AT4G35580 48.734 158 69 4 17 172 12 159 1.10e-44 162
MS.gene032886.t1 AT5G04410 44.970 169 81 3 14 180 9 167 1.10e-44 163
MS.gene032886.t1 AT4G35580 48.734 158 69 4 17 172 12 159 1.10e-44 162
MS.gene032886.t1 AT4G35580 48.734 158 69 4 17 172 12 159 1.25e-44 162
MS.gene032886.t1 AT3G12977 45.349 172 83 4 3 172 5 167 1.73e-44 155
MS.gene032886.t1 AT1G34180 43.243 185 86 4 16 191 18 192 1.88e-44 160
MS.gene032886.t1 AT1G33060 45.399 163 77 3 12 172 22 174 2.06e-44 163
MS.gene032886.t1 AT1G33060 45.399 163 77 3 12 172 22 174 2.07e-44 163
MS.gene032886.t1 AT1G32770 44.828 174 73 5 14 174 16 179 2.12e-44 157
MS.gene032886.t1 AT5G46590 55.469 128 54 2 16 141 8 134 2.30e-44 155
MS.gene032886.t1 AT5G46590 55.469 128 54 2 16 141 8 134 3.50e-44 155
MS.gene032886.t1 AT3G10490 45.614 171 72 4 14 177 27 183 3.65e-44 159
MS.gene032886.t1 AT1G34180 43.243 185 86 4 16 191 18 192 1.59e-43 159
MS.gene032886.t1 AT5G24590 45.402 174 83 4 4 174 2 166 2.81e-43 157
MS.gene032886.t1 AT1G34190 45.455 165 78 3 16 178 18 172 7.23e-43 157
MS.gene032886.t1 AT1G34180 40.299 201 89 4 16 195 18 208 2.71e-42 154
MS.gene032886.t1 AT1G32510 41.860 172 86 3 16 180 8 172 5.26e-42 149
MS.gene032886.t1 AT3G49530 43.671 158 78 3 17 172 16 164 1.12e-41 152
MS.gene032886.t1 AT1G34180 40.609 197 86 4 16 191 18 204 2.19e-41 154
MS.gene032886.t1 AT5G09330 40.828 169 88 3 14 180 6 164 2.24e-41 152
MS.gene032886.t1 AT5G09330 40.828 169 88 3 14 180 6 164 2.24e-41 152
MS.gene032886.t1 AT5G09330 40.828 169 88 3 14 180 6 164 2.24e-41 152
MS.gene032886.t1 AT5G09330 40.828 169 88 3 14 180 6 164 2.24e-41 152
MS.gene032886.t1 AT5G09330 40.828 169 88 3 14 180 6 164 2.24e-41 152
MS.gene032886.t1 AT3G49530 44.099 161 78 4 15 172 13 164 3.58e-41 151
MS.gene032886.t1 AT2G33480 46.067 178 78 6 1 175 1 163 9.13e-41 145
MS.gene032886.t1 AT2G33480 46.067 178 76 6 1 175 1 161 1.09e-40 145
MS.gene032886.t1 AT4G28530 41.040 173 74 3 16 172 12 172 1.71e-39 144
MS.gene032886.t1 AT3G10480 38.806 201 75 5 14 177 27 216 3.83e-39 147
MS.gene032886.t1 AT5G64060 32.143 280 154 11 14 283 6 259 1.03e-38 142
MS.gene032886.t1 AT5G22290 41.520 171 80 5 14 180 21 175 2.16e-38 141
MS.gene032886.t1 AT3G44290 46.825 126 64 2 15 139 15 138 1.05e-36 134
MS.gene032886.t1 AT2G27300 43.750 128 69 2 13 139 13 138 2.15e-36 135
MS.gene032886.t1 AT3G44290 46.825 126 64 2 15 139 15 138 2.90e-36 135
MS.gene032886.t1 AT2G43000 62.000 100 29 2 76 175 2 92 1.41e-34 127
MS.gene032886.t1 AT5G04395 42.857 140 66 2 16 141 30 169 4.47e-33 122
MS.gene032886.t1 AT5G61430 51.754 114 43 3 62 173 1 104 6.18e-33 125
MS.gene032886.t1 AT1G32870 41.520 171 84 5 14 180 10 168 1.33e-32 129
MS.gene032886.t1 AT1G32870 41.520 171 84 5 14 180 10 168 1.61e-32 129
MS.gene032886.t1 AT1G32870 41.520 171 84 5 14 180 46 204 2.89e-32 128
MS.gene032886.t1 AT5G22380 34.199 231 130 11 11 234 3 218 1.93e-31 120
MS.gene032886.t1 AT4G10350 50.000 114 47 2 61 174 12 115 3.24e-30 118
MS.gene032886.t1 AT5G64530 37.952 166 85 3 16 175 5 158 3.89e-30 115
MS.gene032886.t1 AT3G12977 50.000 110 46 3 63 172 14 114 1.85e-29 114
MS.gene032886.t1 AT1G56010 49.550 111 49 3 62 172 1 104 2.73e-29 114
MS.gene032886.t1 AT3G44350 36.000 175 93 6 10 176 1 164 3.64e-29 114
MS.gene032886.t1 AT5G64530 44.094 127 59 2 16 142 5 119 5.26e-29 111
MS.gene032886.t1 AT3G44350 39.130 138 74 4 10 140 1 135 1.27e-27 107
MS.gene032886.t1 AT4G01550 41.045 134 75 3 15 144 5 138 4.42e-27 112
MS.gene032886.t1 AT4G01520 38.462 143 81 5 17 154 7 147 9.80e-25 103
MS.gene032886.t1 AT4G01540 39.310 145 81 5 15 154 5 147 1.54e-24 104
MS.gene032886.t1 AT4G01540 39.310 145 81 5 15 154 5 147 2.16e-24 103
MS.gene032886.t1 AT4G01540 39.310 145 81 5 15 154 5 147 2.88e-24 104
MS.gene032886.t1 AT4G01540 39.310 145 81 5 15 154 5 147 2.95e-24 103
MS.gene032886.t1 AT2G33480 44.144 111 48 4 67 175 8 106 1.37e-21 92.4
MS.gene032886.t1 AT2G18060 49.485 97 36 4 92 188 2 85 2.87e-21 93.2
MS.gene032886.t1 AT3G04420 40.157 127 70 3 17 139 6 130 4.75e-21 92.8
MS.gene032886.t1 AT4G28530 38.889 126 61 2 16 125 12 137 6.14e-21 92.8
MS.gene032886.t1 AT1G02230 39.098 133 73 4 17 144 6 135 1.07e-20 92.8
MS.gene032886.t1 AT1G02250 41.406 128 67 4 17 139 6 130 2.02e-20 92.4
MS.gene032886.t1 AT3G04420 40.157 127 70 3 17 139 6 130 2.04e-20 92.0
MS.gene032886.t1 AT1G02220 39.370 127 68 4 17 139 6 127 5.37e-17 82.4
MS.gene032886.t1 AT1G01010 38.971 136 67 7 17 140 6 137 5.52e-17 82.8
MS.gene032886.t1 AT5G14000 33.071 127 79 3 17 141 18 140 1.50e-15 73.9
MS.gene032886.t1 AT5G14000 27.273 165 103 4 17 179 18 167 4.34e-15 73.9
MS.gene032886.t1 AT5G50820 36.842 133 68 6 16 143 19 140 5.81e-15 73.6
MS.gene032886.t1 AT3G56530 32.090 134 86 3 16 146 54 185 4.47e-14 73.2
MS.gene032886.t1 AT3G10490 37.500 96 41 3 87 177 2 83 2.36e-13 71.2
MS.gene032886.t1 AT3G10490 37.500 96 41 3 87 177 2 83 2.36e-13 71.2
MS.gene032886.t1 AT3G04430 33.835 133 74 5 20 140 6 136 2.50e-13 68.9
MS.gene032886.t1 AT5G22290 39.560 91 36 4 93 180 2 76 2.02e-11 63.9

Find 83 sgRNAs with CRISPR-Local

Find 125 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATGTTGTTTGAACAAAAT+TGG 0.184460 5.4:-30102825 None:intergenic
GAAACAGTGCAAGGCCTAAT+AGG 0.247551 5.4:+30101895 MS.gene032886:CDS
TGAAACATCCATTGTAGATT+TGG 0.251668 5.4:-30103067 None:intergenic
TTTGTTGAACCTTTCTCTTT+AGG 0.261897 5.4:-30101296 None:intergenic
GGGTAACTGGAGCTGGATTC+TGG 0.266844 5.4:+30101916 MS.gene032886:CDS
CCAATGCATTATTATCATAT+TGG 0.276292 5.4:-30103227 None:intergenic
GGACTAATAGTGGATTTATA+AGG 0.293506 5.4:-30102928 None:intergenic
AATGCACTTGGAACCTTCTA+AGG 0.302687 5.4:-30101970 None:intergenic
ACATTCACATTAACATTATA+AGG 0.303980 5.4:-30103258 None:intergenic
AAGTTATCTTACCAGGGTTT+AGG 0.305652 5.4:+30101238 MS.gene032886:CDS
ACTAAGATCTTCATTTGAAA+TGG 0.313776 5.4:-30102980 None:intergenic
CATGGAAGTCAAATTTGCTT+TGG 0.326417 5.4:+30103328 MS.gene032886:CDS
GAATTGATGAATTTCAATAT+TGG 0.333275 5.4:+30103300 MS.gene032886:CDS
GCAAGGCCTAATAGGGTAAC+TGG 0.368447 5.4:+30101903 MS.gene032886:CDS
AAAGAGCTTTGTCAAACTCT+TGG 0.374630 5.4:+30102743 MS.gene032886:CDS
CAACTGATGAAGAGCTTGTT+GGG 0.385394 5.4:+30101268 MS.gene032886:CDS
TAACTAGAGGGAACATCAAT+AGG 0.388427 5.4:-30103366 None:intergenic
AAAAGACTAAGGATTTCTTT+AGG 0.389485 5.4:-30101995 None:intergenic
GACTAATAGTGGATTTATAA+GGG 0.390776 5.4:-30102927 None:intergenic
ATGGAAGTCAAATTTGCTTT+GGG 0.392121 5.4:+30103329 MS.gene032886:CDS
CATGTTGTTTGAACAAAATT+GGG 0.393384 5.4:-30102824 None:intergenic
AAGAGCTTTGTCAAACTCTT+GGG 0.395123 5.4:+30102744 MS.gene032886:CDS
CCAGCTCCAGTTACCCTATT+AGG 0.395888 5.4:-30101909 None:intergenic
AATGACTACTCATTACCATT+TGG 0.401669 5.4:+30103198 MS.gene032886:CDS
TCTTCCTTTGTAAAAGACTA+AGG 0.405196 5.4:-30102006 None:intergenic
GAACCTTCTAAGGAGTAGAT+AGG 0.406608 5.4:-30101960 None:intergenic
TGATAATAATGCATTGGTTA+AGG 0.409165 5.4:+30103233 MS.gene032886:CDS
TAGAGGTTCTTGTTTCAGAT+AGG 0.410820 5.4:-30102774 None:intergenic
CCAACTGATGAAGAGCTTGT+TGG 0.413211 5.4:+30101267 MS.gene032886:CDS
CTTGATGAAGTTATCTTACC+AGG 0.416358 5.4:+30101231 MS.gene032886:CDS
AAACCTATCTACTCCTTAGA+AGG 0.422338 5.4:+30101957 MS.gene032886:CDS
GAGTTTGACAAAGCTCTTTG+AGG 0.430372 5.4:-30102739 None:intergenic
ATATCTATAAATATGATCCT+TGG 0.432912 5.4:+30101352 MS.gene032886:CDS
CTAAGATCTTCATTTGAAAT+GGG 0.433260 5.4:-30102979 None:intergenic
ACAACTACAAATTTCATGAA+TGG 0.443610 5.4:+30103156 MS.gene032886:CDS
AAGTACTTCTTTGGTGAAAG+TGG 0.447802 5.4:-30102092 None:intergenic
AAACAGTGCAAGGCCTAATA+GGG 0.452535 5.4:+30101896 MS.gene032886:CDS
GCTGGATTCTGGAAAGCTAC+AGG 0.462218 5.4:+30101927 MS.gene032886:CDS
GTGTAGTAATGGACTAATAG+TGG 0.462562 5.4:-30102938 None:intergenic
TTTCTTTAGGCCAATGCACT+TGG 0.465693 5.4:-30101982 None:intergenic
CCTAATAGGGTAACTGGAGC+TGG 0.468839 5.4:+30101909 MS.gene032886:CDS
AGTGTAGAAGTGGTTGGTTA+AGG 0.469671 5.4:-30102866 None:intergenic
ACTTTCACCAAAGAAGTACT+TGG 0.472752 5.4:+30102094 MS.gene032886:CDS
ACTGGATGATGCATGAGTTC+AGG 0.474694 5.4:+30102051 MS.gene032886:CDS
TAAAGTTTACTCACATTAGC+AGG 0.478939 5.4:-30102128 None:intergenic
TATCTATAAATATGATCCTT+GGG 0.481892 5.4:+30101353 MS.gene032886:CDS
AGAGGTTCTTGTTTCAGATA+GGG 0.482157 5.4:-30102773 None:intergenic
TACAAAGGAAGAGCTGCTAA+AGG 0.482478 5.4:+30102017 MS.gene032886:CDS
TCATATTGGTAATTACCAAA+TGG 0.486227 5.4:-30103213 None:intergenic
TGTGTAGAGTTTGCAAGTAC+AGG 0.488055 5.4:+30101828 MS.gene032886:intron
TTTACTCACATTAGCAGGAA+TGG 0.489171 5.4:-30102123 None:intergenic
ACTACAAATTTCATGAATGG+TGG 0.505591 5.4:+30103159 MS.gene032886:CDS
GATATGGAAGAAAGAAATGA+TGG 0.515202 5.4:+30101201 None:intergenic
GTCTTACTTGGAAGATCCCA+AGG 0.515800 5.4:-30101369 None:intergenic
CCAATATGATAATAATGCAT+TGG 0.521267 5.4:+30103227 MS.gene032886:CDS
CTACAAATTTCATGAATGGT+GGG 0.522679 5.4:+30103160 MS.gene032886:CDS
CTAAAGGAATCAAAACTGAC+TGG 0.527746 5.4:+30102033 MS.gene032886:CDS
GAAAGTGGATCTATGAGAGA+AGG 0.536482 5.4:-30102077 None:intergenic
TTAGAAGGTTCCAAGTGCAT+TGG 0.538706 5.4:+30101972 MS.gene032886:CDS
TGAAATGGGCAAGTGATGAA+AGG 0.548325 5.4:-30102965 None:intergenic
TAACATCTACATCAAAGTCT+TGG 0.551480 5.4:-30102903 None:intergenic
CATTGTTGTTAGTGTAGAAG+TGG 0.554564 5.4:-30102876 None:intergenic
GTTAAAGTCACCAAGCATTG+AGG 0.557277 5.4:-30103115 None:intergenic
CCAACAAGCTCTTCATCAGT+TGG 0.559889 5.4:-30101267 None:intergenic
TGAAAGGCTTTGTGTAGTAA+TGG 0.568461 5.4:-30102949 None:intergenic
GTTGTTAGTGTAGAAGTGGT+TGG 0.570750 5.4:-30102872 None:intergenic
TTAGTGTTAGATGTTTCAAG+TGG 0.573001 5.4:-30103030 None:intergenic
ATGTCATCATCCTCAATGCT+TGG 0.574915 5.4:+30103105 MS.gene032886:CDS
CAAGTACAGGAGAGAAAGAG+TGG 0.578025 5.4:+30101841 MS.gene032886:CDS
TATTATTTCCAAATCTACAA+TGG 0.582705 5.4:+30103059 MS.gene032886:CDS
ATTTCAATATTGGTGATGCA+TGG 0.583124 5.4:+30103310 MS.gene032886:CDS
CTGGATTCTGGAAAGCTACA+GGG 0.596618 5.4:+30101928 MS.gene032886:CDS
CTTGGTTGTTGAATAACTAG+AGG 0.600536 5.4:-30103379 None:intergenic
TTGATGAAGTTATCTTACCA+GGG 0.619974 5.4:+30101232 MS.gene032886:CDS
ACTAATAGTGGATTTATAAG+GGG 0.623822 5.4:-30102926 None:intergenic
TACAAATTAAGTGTAACACT+TGG 0.625059 5.4:-30103397 None:intergenic
TTGGTTGTTGAATAACTAGA+GGG 0.629756 5.4:-30103378 None:intergenic
GTTGGATGAAACCTAAACCC+TGG 0.635953 5.4:-30101249 None:intergenic
GAAAATACAGAAACAGTGCA+AGG 0.653407 5.4:+30101886 MS.gene032886:CDS
TAAAGAGAAAGGTTCAACAA+AGG 0.656075 5.4:+30101298 MS.gene032886:CDS
CTTTAACAAGACATGTGATG+AGG 0.658516 5.4:+30103131 MS.gene032886:CDS
AATTCTTGTTCATCAATACG+AGG 0.699073 5.4:-30103282 None:intergenic
TTAATGAGCTCAATAGACAG+AGG 0.715170 5.4:-30101321 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAGAAATATCTTATATAT+AGG - chr5.4:30101529-30101548 None:intergenic 10.0%
!! AAAAATATACTTAGAATTAG+AGG - chr5.4:30102273-30102292 None:intergenic 15.0%
!! AAAATATACTTAGAATTAGA+GGG - chr5.4:30102272-30102291 None:intergenic 15.0%
!! AAATATCATTTATGGAATTA+TGG + chr5.4:30102642-30102661 MS.gene032886:intron 15.0%
!! CTTATATATAGGTATTTATA+TGG - chr5.4:30101518-30101537 None:intergenic 15.0%
!! TGAAAAAAAATGCTTATAAA+GGG - chr5.4:30101435-30101454 None:intergenic 15.0%
!! TTGAAAAAAAATGCTTATAA+AGG - chr5.4:30101436-30101455 None:intergenic 15.0%
!!! AACATTTTTAATGATTTTAG+CGG + chr5.4:30102524-30102543 MS.gene032886:intron 15.0%
!!! GACAAATATTTTAAATGAAA+TGG + chr5.4:30102402-30102421 MS.gene032886:intron 15.0%
!! ACATTCACATTAACATTATA+AGG - chr5.4:30103261-30103280 None:intergenic 20.0%
!! ATATCTATAAATATGATCCT+TGG + chr5.4:30101352-30101371 MS.gene032886:CDS 20.0%
!! GAATTGATGAATTTCAATAT+TGG + chr5.4:30103300-30103319 MS.gene032886:CDS 20.0%
!! GTAAACTTTATCATTATCTT+AGG + chr5.4:30102141-30102160 MS.gene032886:intron 20.0%
!! GTGTTTGTAAATATCATTTA+TGG + chr5.4:30102634-30102653 MS.gene032886:intron 20.0%
!! TATCTATAAATATGATCCTT+GGG + chr5.4:30101353-30101372 MS.gene032886:CDS 20.0%
!! TATTATTTCCAAATCTACAA+TGG + chr5.4:30103059-30103078 MS.gene032886:CDS 20.0%
! AAAAGACTAAGGATTTCTTT+AGG - chr5.4:30101998-30102017 None:intergenic 25.0%
! ACAACTACAAATTTCATGAA+TGG + chr5.4:30103156-30103175 MS.gene032886:CDS 25.0%
! ACTAAGATCTTCATTTGAAA+TGG - chr5.4:30102983-30103002 None:intergenic 25.0%
! CCAATATGATAATAATGCAT+TGG + chr5.4:30103227-30103246 MS.gene032886:CDS 25.0%
! CCAATGCATTATTATCATAT+TGG - chr5.4:30103230-30103249 None:intergenic 25.0%
! TTCTATTACAAAAGTCAAAC+TGG + chr5.4:30101542-30101561 MS.gene032886:intron 25.0%
!! ACATGTTGTTTGAACAAAAT+TGG - chr5.4:30102828-30102847 None:intergenic 25.0%
!! ATTAAGTTGTTTACCTAAAG+AGG - chr5.4:30101470-30101489 None:intergenic 25.0%
!! CATGTTGTTTGAACAAAATT+GGG - chr5.4:30102827-30102846 None:intergenic 25.0%
!! CTAAGATCTTCATTTGAAAT+GGG - chr5.4:30102982-30103001 None:intergenic 25.0%
!! TCATATTGGTAATTACCAAA+TGG - chr5.4:30103216-30103235 None:intergenic 25.0%
!!! AAATCCTTAGTCTTTTACAA+AGG + chr5.4:30102002-30102021 MS.gene032886:CDS 25.0%
!!! AAGAAGGTTGATAATAGTTA+AGG + chr5.4:30101587-30101606 MS.gene032886:intron 25.0%
!!! ACTAATAGTGGATTTATAAG+GGG - chr5.4:30102929-30102948 None:intergenic 25.0%
!!! ATTTTTGGTTAGCATATTAG+AGG - chr5.4:30102794-30102813 None:intergenic 25.0%
!!! GACTAATAGTGGATTTATAA+GGG - chr5.4:30102930-30102949 None:intergenic 25.0%
!!! TGATAATAATGCATTGGTTA+AGG + chr5.4:30103233-30103252 MS.gene032886:CDS 25.0%
!!! TTTATTTCTATAAGCTCTCT+AGG - chr5.4:30101708-30101727 None:intergenic 25.0%
AATGACTACTCATTACCATT+TGG + chr5.4:30103198-30103217 MS.gene032886:CDS 30.0%
AATTCTTGTTCATCAATACG+AGG - chr5.4:30103285-30103304 None:intergenic 30.0%
ACACTGTTTAGCATAGTTTA+TGG - chr5.4:30101772-30101791 None:intergenic 30.0%
ACTACAAATTTCATGAATGG+TGG + chr5.4:30103159-30103178 MS.gene032886:CDS 30.0%
CATTACGATCCTTGATATTA+TGG + chr5.4:30102194-30102213 MS.gene032886:intron 30.0%
CATTGTCAACATATCATAGT+TGG + chr5.4:30102462-30102481 MS.gene032886:intron 30.0%
CTACAAATTTCATGAATGGT+GGG + chr5.4:30103160-30103179 MS.gene032886:CDS 30.0%
TAAAGAGAAAGGTTCAACAA+AGG + chr5.4:30101298-30101317 MS.gene032886:CDS 30.0%
TAAAGTTTACTCACATTAGC+AGG - chr5.4:30102131-30102150 None:intergenic 30.0%
TAACATCTACATCAAAGTCT+TGG - chr5.4:30102906-30102925 None:intergenic 30.0%
TATAAGTGTCTTGTCTTACT+TGG - chr5.4:30101384-30101403 None:intergenic 30.0%
TCTTCCTTTGTAAAAGACTA+AGG - chr5.4:30102009-30102028 None:intergenic 30.0%
TGAAACATCCATTGTAGATT+TGG - chr5.4:30103070-30103089 None:intergenic 30.0%
TTAGCATAGTTTATGGAAAG+TGG - chr5.4:30101765-30101784 None:intergenic 30.0%
TTAGTGTTAGATGTTTCAAG+TGG - chr5.4:30103033-30103052 None:intergenic 30.0%
TTGATGAAGTTATCTTACCA+GGG + chr5.4:30101232-30101251 MS.gene032886:CDS 30.0%
TTGGTTGTTGAATAACTAGA+GGG - chr5.4:30103381-30103400 None:intergenic 30.0%
TTTGTTGAACCTTTCTCTTT+AGG - chr5.4:30101299-30101318 None:intergenic 30.0%
! ATGGAAGTCAAATTTGCTTT+GGG + chr5.4:30103329-30103348 MS.gene032886:CDS 30.0%
! TTGGGTGATTTCTTGATTTT+TGG - chr5.4:30102809-30102828 None:intergenic 30.0%
! TTTCTGTATTTTCTGTCTCT+TGG - chr5.4:30101879-30101898 None:intergenic 30.0%
! TTTTAACATGCAGGAATCAT+GGG + chr5.4:30102681-30102700 MS.gene032886:intron 30.0%
!! ATTTCAATATTGGTGATGCA+TGG + chr5.4:30103310-30103329 MS.gene032886:CDS 30.0%
!! GGACTAATAGTGGATTTATA+AGG - chr5.4:30102931-30102950 None:intergenic 30.0%
!! TAACTTGTCTTTTAACATGC+AGG + chr5.4:30102672-30102691 MS.gene032886:intron 30.0%
AAACCTATCTACTCCTTAGA+AGG + chr5.4:30101957-30101976 MS.gene032886:CDS 35.0%
AAACTGAACTTAGCCTCTTT+AGG + chr5.4:30101454-30101473 MS.gene032886:intron 35.0%
AAGTACTTCTTTGGTGAAAG+TGG - chr5.4:30102095-30102114 None:intergenic 35.0%
AAGTTATCTTACCAGGGTTT+AGG + chr5.4:30101238-30101257 MS.gene032886:CDS 35.0%
ATAGGCTTGCATACTAAAGA+AGG + chr5.4:30101571-30101590 MS.gene032886:intron 35.0%
ATGAAATGGTTGCAATGAGA+TGG + chr5.4:30102416-30102435 MS.gene032886:intron 35.0%
CTAAAGGAATCAAAACTGAC+TGG + chr5.4:30102033-30102052 MS.gene032886:CDS 35.0%
CTTGATGAAGTTATCTTACC+AGG + chr5.4:30101231-30101250 MS.gene032886:CDS 35.0%
CTTGGTTGTTGAATAACTAG+AGG - chr5.4:30103382-30103401 None:intergenic 35.0%
CTTTAACAAGACATGTGATG+AGG + chr5.4:30103131-30103150 MS.gene032886:CDS 35.0%
GAAAATACAGAAACAGTGCA+AGG + chr5.4:30101886-30101905 MS.gene032886:CDS 35.0%
TAACTAGAGGGAACATCAAT+AGG - chr5.4:30103369-30103388 None:intergenic 35.0%
TGCGATTCTCCATAATATCA+AGG - chr5.4:30102206-30102225 None:intergenic 35.0%
TTAATGAGCTCAATAGACAG+AGG - chr5.4:30101324-30101343 None:intergenic 35.0%
TTTACTCACATTAGCAGGAA+TGG - chr5.4:30102126-30102145 None:intergenic 35.0%
! AAAGAGCTTTGTCAAACTCT+TGG + chr5.4:30102743-30102762 MS.gene032886:CDS 35.0%
! AAGAGCTTTGTCAAACTCTT+GGG + chr5.4:30102744-30102763 MS.gene032886:CDS 35.0%
! AGAGGTTCTTGTTTCAGATA+GGG - chr5.4:30102776-30102795 None:intergenic 35.0%
! CATGGAAGTCAAATTTGCTT+TGG + chr5.4:30103328-30103347 MS.gene032886:CDS 35.0%
! CATTGTTGTTAGTGTAGAAG+TGG - chr5.4:30102879-30102898 None:intergenic 35.0%
! CTTTTAACATGCAGGAATCA+TGG + chr5.4:30102680-30102699 MS.gene032886:intron 35.0%
! GTTTTCTCCAAGTACTTCTT+TGG - chr5.4:30102104-30102123 None:intergenic 35.0%
! TAGAGGTTCTTGTTTCAGAT+AGG - chr5.4:30102777-30102796 None:intergenic 35.0%
! TGAAAGGCTTTGTGTAGTAA+TGG - chr5.4:30102952-30102971 None:intergenic 35.0%
! TGGGTTTTACCTAAAGAGAA+AGG + chr5.4:30101287-30101306 MS.gene032886:CDS 35.0%
!! AAGTCAAACTGGTTCGATAT+AGG + chr5.4:30101553-30101572 MS.gene032886:intron 35.0%
!! ACTTTCACCAAAGAAGTACT+TGG + chr5.4:30102094-30102113 MS.gene032886:CDS 35.0%
!! GTGTAGTAATGGACTAATAG+TGG - chr5.4:30102941-30102960 None:intergenic 35.0%
AAACAGTGCAAGGCCTAATA+GGG + chr5.4:30101896-30101915 MS.gene032886:CDS 40.0%
AAATGGTTGCAATGAGATGG+AGG + chr5.4:30102419-30102438 MS.gene032886:intron 40.0%
AATGCACTTGGAACCTTCTA+AGG - chr5.4:30101973-30101992 None:intergenic 40.0%
AATGGTTGCAATGAGATGGA+GGG + chr5.4:30102420-30102439 MS.gene032886:intron 40.0%
ATGTCATCATCCTCAATGCT+TGG + chr5.4:30103105-30103124 MS.gene032886:CDS 40.0%
CACCGTACAGAATGTTGTAT+CGG - chr5.4:30102564-30102583 None:intergenic 40.0%
GAAAGTGGATCTATGAGAGA+AGG - chr5.4:30102080-30102099 None:intergenic 40.0%
GACCGATACAACATTCTGTA+CGG + chr5.4:30102559-30102578 MS.gene032886:intron 40.0%
GAGTTTGACAAAGCTCTTTG+AGG - chr5.4:30102742-30102761 None:intergenic 40.0%
GTTGTTAGTGTAGAAGTGGT+TGG - chr5.4:30102875-30102894 None:intergenic 40.0%
TACAAAGGAAGAGCTGCTAA+AGG + chr5.4:30102017-30102036 MS.gene032886:CDS 40.0%
TGAAATGGGCAAGTGATGAA+AGG - chr5.4:30102968-30102987 None:intergenic 40.0%
TGTGTAGAGTTTGCAAGTAC+AGG + chr5.4:30101828-30101847 MS.gene032886:intron 40.0%
TTAGAAGGTTCCAAGTGCAT+TGG + chr5.4:30101972-30101991 MS.gene032886:CDS 40.0%
TTTCTTTAGGCCAATGCACT+TGG - chr5.4:30101985-30102004 None:intergenic 40.0%
! AGTGTAGAAGTGGTTGGTTA+AGG - chr5.4:30102869-30102888 None:intergenic 40.0%
! AGTTAAGGTGCTAACCTAGT+TGG + chr5.4:30101602-30101621 MS.gene032886:intron 40.0%
! CAACTGATGAAGAGCTTGTT+GGG + chr5.4:30101268-30101287 MS.gene032886:CDS 40.0%
! GAACCTTCTAAGGAGTAGAT+AGG - chr5.4:30101963-30101982 None:intergenic 40.0%
! GTTAAAGTCACCAAGCATTG+AGG - chr5.4:30103118-30103137 None:intergenic 40.0%
! GTTAAGGTGCTAACCTAGTT+GGG + chr5.4:30101603-30101622 MS.gene032886:intron 40.0%
AACTCGTGCGATGTCAACAT+AGG + chr5.4:30102235-30102254 MS.gene032886:intron 45.0%
AATGTGCGAACATCCCAACT+AGG - chr5.4:30101619-30101638 None:intergenic 45.0%
ACTGGATGATGCATGAGTTC+AGG + chr5.4:30102051-30102070 MS.gene032886:CDS 45.0%
CAAGTACAGGAGAGAAAGAG+TGG + chr5.4:30101841-30101860 MS.gene032886:CDS 45.0%
CCAACAAGCTCTTCATCAGT+TGG - chr5.4:30101270-30101289 None:intergenic 45.0%
CCAACTGATGAAGAGCTTGT+TGG + chr5.4:30101267-30101286 MS.gene032886:CDS 45.0%
GAAACAGTGCAAGGCCTAAT+AGG + chr5.4:30101895-30101914 MS.gene032886:CDS 45.0%
GTCTTACTTGGAAGATCCCA+AGG - chr5.4:30101372-30101391 None:intergenic 45.0%
GTTGGATGAAACCTAAACCC+TGG - chr5.4:30101252-30101271 None:intergenic 45.0%
! CTGGATTCTGGAAAGCTACA+GGG + chr5.4:30101928-30101947 MS.gene032886:CDS 45.0%
!!! ATTATTAATATAGATATTTT+AGG - chr5.4:30102343-30102362 None:intergenic 5.0%
!!! TTTTTTTTTTTAAAAAACTT+AGG + chr5.4:30102599-30102618 MS.gene032886:intron 5.0%
CCAGCTCCAGTTACCCTATT+AGG - chr5.4:30101912-30101931 None:intergenic 50.0%
CCTAATAGGGTAACTGGAGC+TGG + chr5.4:30101909-30101928 MS.gene032886:CDS 50.0%
GCAAGGCCTAATAGGGTAAC+TGG + chr5.4:30101903-30101922 MS.gene032886:CDS 50.0%
! GCTGGATTCTGGAAAGCTAC+AGG + chr5.4:30101927-30101946 MS.gene032886:CDS 50.0%
GGGTAACTGGAGCTGGATTC+TGG + chr5.4:30101916-30101935 MS.gene032886:CDS 55.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 30101204 30103413 30101204 ID=MS.gene032886
chr5.4 mRNA 30101204 30103413 30101204 ID=MS.gene032886.t1;Parent=MS.gene032886
chr5.4 exon 30101204 30101384 30101204 ID=MS.gene032886.t1.exon1;Parent=MS.gene032886.t1
chr5.4 CDS 30101204 30101384 30101204 ID=cds.MS.gene032886.t1;Parent=MS.gene032886.t1
chr5.4 exon 30101835 30102136 30101835 ID=MS.gene032886.t1.exon2;Parent=MS.gene032886.t1
chr5.4 CDS 30101835 30102136 30101835 ID=cds.MS.gene032886.t1;Parent=MS.gene032886.t1
chr5.4 exon 30102694 30103413 30102694 ID=MS.gene032886.t1.exon3;Parent=MS.gene032886.t1
chr5.4 CDS 30102694 30103413 30102694 ID=cds.MS.gene032886.t1;Parent=MS.gene032886.t1
Gene Sequence

>MS.gene032886

ATGGAAGAAAGAAATGATGGTGAAAAACTTGATGAAGTTATCTTACCAGGGTTTAGGTTTCATCCAACTGATGAAGAGCTTGTTGGGTTTTACCTAAAGAGAAAGGTTCAACAAAGGCCTCTGTCTATTGAGCTCATTAAGCAGCTTGATATCTATAAATATGATCCTTGGGATCTTCCAAGTAAGACAAGACACTTATATATCTATGTTGATTCTTCACATTTATAACCCTTTATAAGCATTTTTTTTCAAACTGAACTTAGCCTCTTTAGGTAAACAACTTAATTAAGTGCTTATAGTATACACACTTACCATATAAATACCTATATATAAGATATTTCTATTACAAAAGTCAAACTGGTTCGATATAGGCTTGCATACTAAAGAAGGTTGATAATAGTTAAGGTGCTAACCTAGTTGGGATGTTCGCACATTACATTAATGTTTTGCATGTCTAACTTTTATCAACAAAAGAAGTCATAAGTTGTTTACATAAGTTATCCTAGAGAGCTTATAGAAATAAACGAAAAAAAGTTTAAGACTTGTCATAAGCAATTTCCACTTTCCATAAACTATGCTAAACAGTGTCACAAGTACTAATATATATGTTTGTATGATTGTATGTGTGTAGAGTTTGCAAGTACAGGAGAGAAAGAGTGGTATTTCTACTGTCCAAGAGACAGAAAATACAGAAACAGTGCAAGGCCTAATAGGGTAACTGGAGCTGGATTCTGGAAAGCTACAGGGACAGATAAACCTATCTACTCCTTAGAAGGTTCCAAGTGCATTGGCCTAAAGAAATCCTTAGTCTTTTACAAAGGAAGAGCTGCTAAAGGAATCAAAACTGACTGGATGATGCATGAGTTCAGGCTACCTTCTCTCATAGATCCACTTTCACCAAAGAAGTACTTGGAGAAAACCATTCCTGCTAATGTGAGTAAACTTTATCATTATCTTAGGAAATTTAAGTTATCATTTTCAATGCAATCACATTACGATCCTTGATATTATGGAGAATCGCAGTCAAATGTAACTCGTGCGATGTCAACATAGGTTGCATGAACTCCCTCTAATTCTAAGTATATTTTTATGAAAATGATTAGTCTATGTTGAAATATGTAGTTAAAAATTGTGTGCCTAAAATATCTATATTAATAATAAATGTTGTATTTGTATTCTAAAGTGAGAAATAATTTGAGACAAATATTTTAAATGAAATGGTTGCAATGAGATGGAGGGAGTATCAAAAACTTGTTGACATTGTCAACATATCATAGTTGGTCATATGTGTGACTTTAAAAATAGTTATGAATAAAGTCAAACATTTTTAATGATTTTAGCGGTTATAATTTATTGACCGATACAACATTCTGTACGGTGTGATGTATATGAATTTTTTTTTTTTTAAAAAACTTAGGTTTTAATTGTTAGTGTTTGTAAATATCATTTATGGAATTATGGACATCTTTAACTTGTCTTTTAACATGCAGGAATCATGGGCTATCTGTAGAATATTCAAGAAAACAAATTCTACACCTCAAAGAGCTTTGTCAAACTCTTGGGTTTCTTCCCTATCTGAAACAAGAACCTCTAATATGCTAACCAAAAATCAAGAAATCACCCAATTTTGTTCAAACAACATGTCATTGACAAAGAGTACATCCTTAACCAACCACTTCTACACTAACAACAATGATAACCAAGACTTTGATGTAGATGTTACCCCTTATAAATCCACTATTAGTCCATTACTACACAAAGCCTTTCATCACTTGCCCATTTCAAATGAAGATCTTAGTACTAACTTGATATTCTCATCATCATCTCCACTTGAAACATCTAACACTAATAGTGATATTATTTCCAAATCTACAATGGATGTTTCATCAATGTTGTTGAATATGTCATCATCCTCAATGCTTGGTGACTTTAACAAGACATGTGATGAGGTTACAACTACAAATTTCATGAATGGTGGGTTGCAAGAGCAATTTAATGACTACTCATTACCATTTGGTAATTACCAATATGATAATAATGCATTGGTTAAGGTACCTTATAATGTTAATGTGAATGTGCCTCGTATTGATGAACAAGAATTGATGAATTTCAATATTGGTGATGCATGGAAGTCAAATTTGCTTTGGGATACTTCATTTTGTCCTATTGATGTTCCCTCTAGTTATTCAACAACCAAGTGTTACACTTAA
Protein sequence

>MS.gene032886.t1

MEERNDGEKLDEVILPGFRFHPTDEELVGFYLKRKVQQRPLSIELIKQLDIYKYDPWDLPKFASTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDKPIYSLEGSKCIGLKKSLVFYKGRAAKGIKTDWMMHEFRLPSLIDPLSPKKYLEKTIPANESWAICRIFKKTNSTPQRALSNSWVSSLSETRTSNMLTKNQEITQFCSNNMSLTKSTSLTNHFYTNNNDNQDFDVDVTPYKSTISPLLHKAFHHLPISNEDLSTNLIFSSSSPLETSNTNSDIISKSTMDVSSMLLNMSSSSMLGDFNKTCDEVTTTNFMNGGLQEQFNDYSLPFGNYQYDNNALVKVPYNVNVNVPRIDEQELMNFNIGDAWKSNLLWDTSFCPIDVPSSYSTTKCYT