Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033074.t1 | XP_013457964.1 | 95.8 | 518 | 13 | 5 | 1 | 511 | 1 | 516 | 5.60E-253 | 883.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033074.t1 | Q9M202 | 39.8 | 166 | 58 | 6 | 330 | 489 | 155 | 284 | 6.3e-19 | 97.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033074.t1 | A0A072V1J8 | 95.8 | 518 | 13 | 5 | 1 | 511 | 1 | 516 | 4.1e-253 | 883.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene033074.t1 | TF | C2H2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033074.t1 | MTR_4g109340 | 95.753 | 518 | 13 | 5 | 1 | 511 | 1 | 516 | 0.0 | 1003 |
| MS.gene033074.t1 | MTR_3g023760 | 39.002 | 441 | 184 | 17 | 1 | 394 | 1 | 403 | 2.70e-61 | 208 |
| MS.gene033074.t1 | MTR_3g023760 | 37.097 | 124 | 46 | 3 | 420 | 511 | 341 | 464 | 1.82e-15 | 79.3 |
| MS.gene033074.t1 | MTR_4g028610 | 39.506 | 162 | 74 | 5 | 342 | 483 | 224 | 381 | 1.14e-25 | 110 |
| MS.gene033074.t1 | MTR_4g028610 | 26.913 | 379 | 212 | 15 | 4 | 367 | 6 | 334 | 3.60e-16 | 81.6 |
| MS.gene033074.t1 | MTR_0160s0030 | 36.471 | 170 | 64 | 4 | 328 | 492 | 218 | 348 | 3.45e-24 | 104 |
| MS.gene033074.t1 | MTR_4g027440 | 39.744 | 156 | 52 | 6 | 342 | 482 | 217 | 345 | 6.77e-22 | 97.8 |
| MS.gene033074.t1 | MTR_5g099040 | 45.536 | 112 | 51 | 4 | 344 | 452 | 129 | 233 | 1.67e-18 | 86.3 |
| MS.gene033074.t1 | MTR_4g082980 | 30.705 | 241 | 139 | 6 | 10 | 233 | 7 | 236 | 1.84e-17 | 85.1 |
| MS.gene033074.t1 | MTR_4g082980 | 50.000 | 58 | 27 | 1 | 430 | 485 | 393 | 450 | 3.44e-12 | 68.9 |
| MS.gene033074.t1 | MTR_5g062300 | 40.367 | 109 | 45 | 3 | 344 | 452 | 118 | 206 | 6.08e-17 | 80.9 |
| MS.gene033074.t1 | MTR_1g090703 | 34.591 | 159 | 76 | 7 | 345 | 485 | 156 | 304 | 1.46e-14 | 75.5 |
| MS.gene033074.t1 | MTR_4g057230 | 36.538 | 156 | 81 | 4 | 345 | 485 | 113 | 265 | 4.67e-14 | 73.2 |
| MS.gene033074.t1 | MTR_1g018420 | 36.986 | 146 | 56 | 6 | 345 | 484 | 81 | 196 | 5.26e-14 | 72.0 |
| MS.gene033074.t1 | MTR_2g084315 | 38.596 | 171 | 65 | 7 | 345 | 489 | 125 | 281 | 6.28e-14 | 72.8 |
| MS.gene033074.t1 | MTR_1g062780 | 34.054 | 185 | 89 | 8 | 327 | 486 | 94 | 270 | 1.12e-12 | 69.3 |
| MS.gene033074.t1 | MTR_3g102980 | 36.552 | 145 | 53 | 6 | 346 | 481 | 87 | 201 | 2.76e-12 | 67.0 |
| MS.gene033074.t1 | MTR_1g106730 | 40.187 | 107 | 27 | 4 | 346 | 452 | 84 | 153 | 8.28e-12 | 65.9 |
| MS.gene033074.t1 | MTR_4g100860 | 50.000 | 62 | 27 | 2 | 431 | 488 | 247 | 308 | 1.27e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033074.t1 | AT2G45120 | 45.833 | 168 | 47 | 7 | 328 | 489 | 179 | 308 | 1.48e-30 | 121 |
| MS.gene033074.t1 | AT3G60580 | 41.216 | 148 | 48 | 5 | 342 | 486 | 170 | 281 | 7.10e-24 | 102 |
| MS.gene033074.t1 | AT4G35280 | 39.597 | 149 | 49 | 4 | 344 | 489 | 161 | 271 | 1.92e-21 | 94.7 |
| MS.gene033074.t1 | AT1G02030 | 42.857 | 147 | 42 | 4 | 341 | 486 | 155 | 260 | 2.40e-21 | 94.4 |
| MS.gene033074.t1 | AT2G17180 | 36.111 | 144 | 60 | 4 | 344 | 487 | 147 | 258 | 1.60e-17 | 83.2 |
| MS.gene033074.t1 | AT1G02040 | 38.926 | 149 | 75 | 3 | 345 | 487 | 150 | 288 | 2.15e-17 | 83.6 |
| MS.gene033074.t1 | AT5G03510 | 35.032 | 157 | 77 | 4 | 343 | 485 | 116 | 261 | 4.58e-16 | 79.3 |
| MS.gene033074.t1 | AT2G28200 | 36.875 | 160 | 64 | 5 | 345 | 481 | 115 | 260 | 3.39e-15 | 76.6 |
| MS.gene033074.t1 | AT1G26610 | 51.389 | 72 | 33 | 2 | 415 | 485 | 385 | 455 | 3.91e-15 | 78.2 |
| MS.gene033074.t1 | AT5G04390 | 42.727 | 110 | 50 | 4 | 345 | 452 | 153 | 251 | 5.22e-14 | 73.9 |
| MS.gene033074.t1 | AT3G19580 | 35.625 | 160 | 60 | 5 | 340 | 484 | 101 | 232 | 1.47e-13 | 71.6 |
| MS.gene033074.t1 | AT3G19580 | 35.625 | 160 | 60 | 5 | 340 | 484 | 101 | 232 | 1.47e-13 | 71.6 |
| MS.gene033074.t1 | AT3G10470 | 36.283 | 113 | 56 | 2 | 345 | 452 | 182 | 283 | 2.38e-12 | 69.3 |
| MS.gene033074.t1 | AT5G56200 | 39.474 | 114 | 53 | 2 | 342 | 455 | 339 | 436 | 4.11e-12 | 68.9 |
| MS.gene033074.t1 | AT5G67450 | 37.963 | 108 | 49 | 3 | 345 | 452 | 97 | 186 | 2.02e-11 | 64.7 |
| MS.gene033074.t1 | AT1G26590 | 50.000 | 64 | 21 | 2 | 423 | 486 | 309 | 361 | 9.67e-11 | 63.9 |
| MS.gene033074.t1 | AT1G26590 | 50.000 | 64 | 21 | 2 | 423 | 486 | 309 | 361 | 9.67e-11 | 63.9 |
| MS.gene033074.t1 | AT1G26590 | 50.000 | 64 | 21 | 2 | 423 | 486 | 309 | 361 | 9.67e-11 | 63.9 |
| MS.gene033074.t1 | AT1G26590 | 50.000 | 64 | 21 | 2 | 423 | 486 | 327 | 379 | 9.82e-11 | 63.9 |
Find 62 sgRNAs with CRISPR-Local
Find 73 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTTCTCCATGTCTTCTT+TGG | 0.075353 | 8.3:-15302551 | None:intergenic |
| AGGGAAAAGTTTAGAGATTT+TGG | 0.115530 | 8.3:+15303093 | MS.gene033074:CDS |
| CCCTTTGAACTTCAAATTCT+TGG | 0.126081 | 8.3:-15303074 | None:intergenic |
| GAAGATTCAGAAGTTGAAAA+TGG | 0.193847 | 8.3:+15303211 | MS.gene033074:CDS |
| TGAGTGTCCAATTTGCTTTA+AGG | 0.196640 | 8.3:+15303618 | MS.gene033074:CDS |
| ATGCCCTTTAATCTTCTTCT+TGG | 0.204703 | 8.3:-15303593 | None:intergenic |
| TTTCCTTGTGGTAGATCTTT+AGG | 0.228997 | 8.3:+15302386 | MS.gene033074:CDS |
| CTACAAGTGCCTCTTGATTA+TGG | 0.245683 | 8.3:-15303837 | None:intergenic |
| ATGAGCTTGCTTTCAGTTGT+TGG | 0.246397 | 8.3:-15303511 | None:intergenic |
| CACTCTTGGCAAGCTTTGTT+TGG | 0.254693 | 8.3:+15302641 | MS.gene033074:CDS |
| TCTTTCTCCATGTCTTCTTT+GGG | 0.291035 | 8.3:-15302550 | None:intergenic |
| AGAAAGAGTTTCTAACAGTT+TGG | 0.300359 | 8.3:+15302688 | MS.gene033074:CDS |
| GATTCCAAGAAGAAGATTAA+AGG | 0.330354 | 8.3:+15303589 | MS.gene033074:CDS |
| GAGAACAAGAAGTGCGAGTT+AGG | 0.355844 | 8.3:+15303040 | MS.gene033074:CDS |
| GGAACAAGTTCCACAGATTA+GGG | 0.363512 | 8.3:+15303723 | MS.gene033074:CDS |
| TTTCAATCTGGTCAAGCCTT+AGG | 0.371292 | 8.3:+15303643 | MS.gene033074:CDS |
| TTTCATTCTTATCAAGCTCT+TGG | 0.373280 | 8.3:+15303388 | MS.gene033074:CDS |
| AGGAACAAGTTCCACAGATT+AGG | 0.383607 | 8.3:+15303722 | MS.gene033074:CDS |
| TATCAAAGTCAGCTACTATA+AGG | 0.397815 | 8.3:+15303266 | MS.gene033074:CDS |
| ATTCCAAGAAGAAGATTAAA+GGG | 0.409460 | 8.3:+15303590 | MS.gene033074:CDS |
| GGATTCAAGATGATCAAAAC+TGG | 0.409796 | 8.3:+15303127 | MS.gene033074:CDS |
| CCAAGAATTTGAAGTTCAAA+GGG | 0.426487 | 8.3:+15303074 | MS.gene033074:CDS |
| GTTTGGAGGATCAAGATTCA+TGG | 0.428070 | 8.3:+15302705 | MS.gene033074:CDS |
| AAGATTCAGAAGTTGAAAAT+GGG | 0.428326 | 8.3:+15303212 | MS.gene033074:CDS |
| TCCAAGAATTTGAAGTTCAA+AGG | 0.432409 | 8.3:+15303073 | MS.gene033074:CDS |
| CATAATCAAGAGGCACTTGT+AGG | 0.439216 | 8.3:+15303838 | MS.gene033074:CDS |
| AAACTGGAGTTTGCATCAAA+GGG | 0.452059 | 8.3:+15303143 | MS.gene033074:CDS |
| AGCTTCTTCTTCTGTTTCTG+AGG | 0.456439 | 8.3:+15302835 | MS.gene033074:CDS |
| AAAACTGGAGTTTGCATCAA+AGG | 0.462834 | 8.3:+15303142 | MS.gene033074:CDS |
| GGTTCTGAAGCTGCAACTAA+TGG | 0.470954 | 8.3:+15302506 | MS.gene033074:CDS |
| AATGGGAAAAGCAGAGTCAA+TGG | 0.477352 | 8.3:+15303229 | MS.gene033074:CDS |
| CTTTCTTCCTCAGTAGCAGC+AGG | 0.478387 | 8.3:-15303766 | None:intergenic |
| TGGACATAAAAGATCTCATA+TGG | 0.479948 | 8.3:+15303666 | MS.gene033074:CDS |
| CATTCTTATCAAGCTCTTGG+AGG | 0.487098 | 8.3:+15303391 | MS.gene033074:CDS |
| AGATCTCATATGGTTGCTAC+TGG | 0.491040 | 8.3:+15303676 | MS.gene033074:CDS |
| AAGAGTTTCTAACAGTTTGG+AGG | 0.513244 | 8.3:+15302691 | MS.gene033074:CDS |
| AGACCTTGGTGGATAGTTGA+AGG | 0.528869 | 8.3:+15303811 | MS.gene033074:CDS |
| TAATCTTCCTGCTGCTACTG+AGG | 0.529053 | 8.3:+15303759 | MS.gene033074:CDS |
| GCTTGATTATCTGTCTACAT+TGG | 0.549776 | 8.3:+15303189 | MS.gene033074:CDS |
| TTAGTAGAGATGTTAGTCCT+TGG | 0.555862 | 8.3:+15302900 | MS.gene033074:CDS |
| GACAAATTCTGCAAAGAGTG+TGG | 0.556631 | 8.3:+15302608 | MS.gene033074:CDS |
| CTGATTCTAACAGACCTTGG+TGG | 0.557324 | 8.3:+15303800 | MS.gene033074:CDS |
| CAATCTGGTCAAGCCTTAGG+TGG | 0.558498 | 8.3:+15303646 | MS.gene033074:CDS |
| GCTGCAACTAATGGTAGCTA+TGG | 0.563432 | 8.3:+15302515 | MS.gene033074:CDS |
| GAGAGAACCCAAAGAAGACA+TGG | 0.571762 | 8.3:+15302543 | MS.gene033074:CDS |
| CCTTGTGGTAGATCTTTAGG+AGG | 0.573424 | 8.3:+15302389 | MS.gene033074:CDS |
| GTAAACAGAATTATTATCAG+AGG | 0.576383 | 8.3:-15302951 | None:intergenic |
| CAAGAGGCACTTGTAGGGTA+CGG | 0.590543 | 8.3:+15303844 | MS.gene033074:CDS |
| ATGCTGATTCTAACAGACCT+TGG | 0.596589 | 8.3:+15303797 | MS.gene033074:CDS |
| TCAAGAAAGTCCCTAATCTG+TGG | 0.600941 | 8.3:-15303733 | None:intergenic |
| ATAATCAAGAGGCACTTGTA+GGG | 0.602596 | 8.3:+15303839 | MS.gene033074:CDS |
| TCTTCATGATCATGATCATG+AGG | 0.606244 | 8.3:-15303304 | None:intergenic |
| AGATAATGAAGACCACTCCA+AGG | 0.644754 | 8.3:-15302917 | None:intergenic |
| GATCTTTAGGAGGTCACATG+AGG | 0.656622 | 8.3:+15302399 | MS.gene033074:CDS |
| TGAAGGCAACCATAATCAAG+AGG | 0.657701 | 8.3:+15303828 | MS.gene033074:CDS |
| CCTCCTAAAGATCTACCACA+AGG | 0.657873 | 8.3:-15302389 | None:intergenic |
| AACAAGAACAAGGTACAACA+TGG | 0.663025 | 8.3:+15302799 | MS.gene033074:CDS |
| TGAGAGTAGAGTTGTACTTG+AGG | 0.664007 | 8.3:+15303702 | MS.gene033074:CDS |
| AGAGATGTTAGTCCTTGGAG+TGG | 0.673173 | 8.3:+15302905 | MS.gene033074:CDS |
| GATCAAAGAGAACAAGAACA+AGG | 0.701444 | 8.3:+15302789 | MS.gene033074:CDS |
| TGTAGCAAAAGCTTTCCTTG+TGG | 0.721402 | 8.3:+15302374 | MS.gene033074:CDS |
| TTGCCTTCAACTATCCACCA+AGG | 0.733273 | 8.3:-15303814 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCAAGAATTTTAATAAGAG+AGG | + | chr8.3:15303334-15303353 | MS.gene033074:CDS | 20.0% |
| !!! | TTTGATCTTTTCTTTCTATT+TGG | - | chr8.3:15302776-15302795 | None:intergenic | 20.0% |
| ! | AAGATTCAGAAGTTGAAAAT+GGG | + | chr8.3:15303212-15303231 | MS.gene033074:CDS | 25.0% |
| ! | ACAAAAAAGAATGATAGCAT+TGG | + | chr8.3:15302485-15302504 | MS.gene033074:CDS | 25.0% |
| ! | ATTCCAAGAAGAAGATTAAA+GGG | + | chr8.3:15303590-15303609 | MS.gene033074:CDS | 25.0% |
| ! | CTAGTCATAAAAAGAACAAA+GGG | + | chr8.3:15303422-15303441 | MS.gene033074:CDS | 25.0% |
| ! | GTAAACAGAATTATTATCAG+AGG | - | chr8.3:15302954-15302973 | None:intergenic | 25.0% |
| ! | TGAAAAACCTTAAAGCAAAT+TGG | - | chr8.3:15303628-15303647 | None:intergenic | 25.0% |
| AGAAAGAGTTTCTAACAGTT+TGG | + | chr8.3:15302688-15302707 | MS.gene033074:CDS | 30.0% | |
| GAAGATTCAGAAGTTGAAAA+TGG | + | chr8.3:15303211-15303230 | MS.gene033074:CDS | 30.0% | |
| GATTCCAAGAAGAAGATTAA+AGG | + | chr8.3:15303589-15303608 | MS.gene033074:CDS | 30.0% | |
| GCTAGTCATAAAAAGAACAA+AGG | + | chr8.3:15303421-15303440 | MS.gene033074:CDS | 30.0% | |
| TATCAAAGTCAGCTACTATA+AGG | + | chr8.3:15303266-15303285 | MS.gene033074:CDS | 30.0% | |
| TGGACATAAAAGATCTCATA+TGG | + | chr8.3:15303666-15303685 | MS.gene033074:CDS | 30.0% | |
| TTTCATTCTTATCAAGCTCT+TGG | + | chr8.3:15303388-15303407 | MS.gene033074:CDS | 30.0% | |
| ! | AGGGAAAAGTTTAGAGATTT+TGG | + | chr8.3:15303093-15303112 | MS.gene033074:CDS | 30.0% |
| ! | ATAATCAAGCTCAGATTTTG+TGG | - | chr8.3:15303179-15303198 | None:intergenic | 30.0% |
| ! | CCAAGAATTTGAAGTTCAAA+GGG | + | chr8.3:15303074-15303093 | MS.gene033074:CDS | 30.0% |
| ! | TCCAAGAATTTGAAGTTCAA+AGG | + | chr8.3:15303073-15303092 | MS.gene033074:CDS | 30.0% |
| !!! | TGCTTTAAGGTTTTTCAATC+TGG | + | chr8.3:15303631-15303650 | MS.gene033074:CDS | 30.0% |
| AAAACTGGAGTTTGCATCAA+AGG | + | chr8.3:15303142-15303161 | MS.gene033074:CDS | 35.0% | |
| AAACTGGAGTTTGCATCAAA+GGG | + | chr8.3:15303143-15303162 | MS.gene033074:CDS | 35.0% | |
| AACAAGAACAAGGTACAACA+TGG | + | chr8.3:15302799-15302818 | MS.gene033074:CDS | 35.0% | |
| AAGAGTTTCTAACAGTTTGG+AGG | + | chr8.3:15302691-15302710 | MS.gene033074:CDS | 35.0% | |
| ATGCCCTTTAATCTTCTTCT+TGG | - | chr8.3:15303596-15303615 | None:intergenic | 35.0% | |
| CCCTTTGAACTTCAAATTCT+TGG | - | chr8.3:15303077-15303096 | None:intergenic | 35.0% | |
| GATCAAAGAGAACAAGAACA+AGG | + | chr8.3:15302789-15302808 | MS.gene033074:CDS | 35.0% | |
| GCTTGATTATCTGTCTACAT+TGG | + | chr8.3:15303189-15303208 | MS.gene033074:CDS | 35.0% | |
| GGATTCAAGATGATCAAAAC+TGG | + | chr8.3:15303127-15303146 | MS.gene033074:CDS | 35.0% | |
| TCTTCATGATCATGATCATG+AGG | - | chr8.3:15303307-15303326 | None:intergenic | 35.0% | |
| TCTTTCTCCATGTCTTCTTT+GGG | - | chr8.3:15302553-15302572 | None:intergenic | 35.0% | |
| TTAGTAGAGATGTTAGTCCT+TGG | + | chr8.3:15302900-15302919 | MS.gene033074:CDS | 35.0% | |
| TTTCCTTGTGGTAGATCTTT+AGG | + | chr8.3:15302386-15302405 | MS.gene033074:CDS | 35.0% | |
| ! | AGATCTTTTATGTCCACCTA+AGG | - | chr8.3:15303662-15303681 | None:intergenic | 35.0% |
| ! | GAGATTTTGGATGCTGAAAA+AGG | + | chr8.3:15303106-15303125 | MS.gene033074:CDS | 35.0% |
| ! | GTGGAAAATGTTTTCACTCT+TGG | + | chr8.3:15302627-15302646 | MS.gene033074:CDS | 35.0% |
| ! | TGAGTGTCCAATTTGCTTTA+AGG | + | chr8.3:15303618-15303637 | MS.gene033074:CDS | 35.0% |
| !! | ATAATCAAGAGGCACTTGTA+GGG | + | chr8.3:15303839-15303858 | MS.gene033074:CDS | 35.0% |
| AATGGGAAAAGCAGAGTCAA+TGG | + | chr8.3:15303229-15303248 | MS.gene033074:CDS | 40.0% | |
| AGATAATGAAGACCACTCCA+AGG | - | chr8.3:15302920-15302939 | None:intergenic | 40.0% | |
| AGATCTCATATGGTTGCTAC+TGG | + | chr8.3:15303676-15303695 | MS.gene033074:CDS | 40.0% | |
| AGGAACAAGTTCCACAGATT+AGG | + | chr8.3:15303722-15303741 | MS.gene033074:CDS | 40.0% | |
| CATTCTTATCAAGCTCTTGG+AGG | + | chr8.3:15303391-15303410 | MS.gene033074:CDS | 40.0% | |
| CTACAAGTGCCTCTTGATTA+TGG | - | chr8.3:15303840-15303859 | None:intergenic | 40.0% | |
| CTCTTTCTCCATGTCTTCTT+TGG | - | chr8.3:15302554-15302573 | None:intergenic | 40.0% | |
| GACAAATTCTGCAAAGAGTG+TGG | + | chr8.3:15302608-15302627 | MS.gene033074:CDS | 40.0% | |
| GGAACAAGTTCCACAGATTA+GGG | + | chr8.3:15303723-15303742 | MS.gene033074:CDS | 40.0% | |
| GTTTGGAGGATCAAGATTCA+TGG | + | chr8.3:15302705-15302724 | MS.gene033074:CDS | 40.0% | |
| TCAAGAAAGTCCCTAATCTG+TGG | - | chr8.3:15303736-15303755 | None:intergenic | 40.0% | |
| TGAAGGCAACCATAATCAAG+AGG | + | chr8.3:15303828-15303847 | MS.gene033074:CDS | 40.0% | |
| TGAGAGTAGAGTTGTACTTG+AGG | + | chr8.3:15303702-15303721 | MS.gene033074:CDS | 40.0% | |
| TGTAGCAAAAGCTTTCCTTG+TGG | + | chr8.3:15302374-15302393 | MS.gene033074:CDS | 40.0% | |
| TTTCAATCTGGTCAAGCCTT+AGG | + | chr8.3:15303643-15303662 | MS.gene033074:CDS | 40.0% | |
| ! | ATGAGCTTGCTTTCAGTTGT+TGG | - | chr8.3:15303514-15303533 | None:intergenic | 40.0% |
| !! | AGCTTCTTCTTCTGTTTCTG+AGG | + | chr8.3:15302835-15302854 | MS.gene033074:CDS | 40.0% |
| !! | ATGCTGATTCTAACAGACCT+TGG | + | chr8.3:15303797-15303816 | MS.gene033074:CDS | 40.0% |
| !! | CATAATCAAGAGGCACTTGT+AGG | + | chr8.3:15303838-15303857 | MS.gene033074:CDS | 40.0% |
| AGAGATGTTAGTCCTTGGAG+TGG | + | chr8.3:15302905-15302924 | MS.gene033074:CDS | 45.0% | |
| CCTCCTAAAGATCTACCACA+AGG | - | chr8.3:15302392-15302411 | None:intergenic | 45.0% | |
| CCTTGTGGTAGATCTTTAGG+AGG | + | chr8.3:15302389-15302408 | MS.gene033074:CDS | 45.0% | |
| CTGATTCTAACAGACCTTGG+TGG | + | chr8.3:15303800-15303819 | MS.gene033074:CDS | 45.0% | |
| GAGAGAACCCAAAGAAGACA+TGG | + | chr8.3:15302543-15302562 | MS.gene033074:CDS | 45.0% | |
| GCTGCAACTAATGGTAGCTA+TGG | + | chr8.3:15302515-15302534 | MS.gene033074:CDS | 45.0% | |
| TAATCTTCCTGCTGCTACTG+AGG | + | chr8.3:15303759-15303778 | MS.gene033074:CDS | 45.0% | |
| TTGCCTTCAACTATCCACCA+AGG | - | chr8.3:15303817-15303836 | None:intergenic | 45.0% | |
| ! | AGACCTTGGTGGATAGTTGA+AGG | + | chr8.3:15303811-15303830 | MS.gene033074:CDS | 45.0% |
| ! | GAGAACAAGAAGTGCGAGTT+AGG | + | chr8.3:15303040-15303059 | MS.gene033074:CDS | 45.0% |
| ! | GATCTTTAGGAGGTCACATG+AGG | + | chr8.3:15302399-15302418 | MS.gene033074:CDS | 45.0% |
| !! | CACTCTTGGCAAGCTTTGTT+TGG | + | chr8.3:15302641-15302660 | MS.gene033074:CDS | 45.0% |
| !! | GGTTCTGAAGCTGCAACTAA+TGG | + | chr8.3:15302506-15302525 | MS.gene033074:CDS | 45.0% |
| CAATCTGGTCAAGCCTTAGG+TGG | + | chr8.3:15303646-15303665 | MS.gene033074:CDS | 50.0% | |
| CTTTCTTCCTCAGTAGCAGC+AGG | - | chr8.3:15303769-15303788 | None:intergenic | 50.0% | |
| !! | CAAGAGGCACTTGTAGGGTA+CGG | + | chr8.3:15303844-15303863 | MS.gene033074:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 15302329 | 15303882 | 15302329 | ID=MS.gene033074 |
| chr8.3 | mRNA | 15302329 | 15303882 | 15302329 | ID=MS.gene033074.t1;Parent=MS.gene033074 |
| chr8.3 | exon | 15302329 | 15303882 | 15302329 | ID=MS.gene033074.t1.exon1;Parent=MS.gene033074.t1 |
| chr8.3 | CDS | 15302329 | 15303882 | 15302329 | ID=cds.MS.gene033074.t1;Parent=MS.gene033074.t1 |
| Gene Sequence |
| Protein sequence |
