AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene03321

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene03321.t1 MTR_6g035370 88.174 668 51 8 1 662 1 646 0.0 815
MS.gene03321.t1 MTR_1g098900 55.102 686 225 18 1 658 1 631 0.0 597
MS.gene03321.t1 MTR_1g098870 42.123 603 236 13 2 600 3 496 1.12e-125 384
MS.gene03321.t1 MTR_2g026725 31.597 288 145 7 281 568 115 350 1.18e-34 136
MS.gene03321.t1 MTR_2g026725 39.796 98 56 2 54 149 261 357 1.71e-16 82.4
MS.gene03321.t1 MTR_1g492790 52.756 127 55 2 54 175 113 239 1.46e-34 138
MS.gene03321.t1 MTR_1g492790 45.652 92 48 2 476 566 110 200 4.07e-19 91.7
MS.gene03321.t1 MTR_1g060990 64.583 96 31 2 46 140 124 217 5.77e-32 130
MS.gene03321.t1 MTR_1g060990 46.237 93 48 2 476 567 127 218 4.16e-19 91.7
MS.gene03321.t1 MTR_1g060990 37.383 107 67 0 251 357 264 370 4.08e-14 75.9
MS.gene03321.t1 MTR_7g114860 57.000 100 34 2 480 570 381 480 2.33e-28 119
MS.gene03321.t1 MTR_7g114860 41.837 98 47 2 55 142 381 478 7.77e-16 81.3
MS.gene03321.t1 MTR_1g081180 59.783 92 35 1 480 569 418 509 1.54e-26 114
MS.gene03321.t1 MTR_1g081180 39.785 93 53 2 53 142 416 508 5.99e-14 75.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene03321.t1 AT1G76880 57.099 324 93 8 43 359 49 333 1.46e-93 301
MS.gene03321.t1 AT1G76880 65.584 154 38 3 458 598 382 533 4.09e-60 212
MS.gene03321.t1 AT1G76880 46.739 92 48 1 50 140 403 494 3.74e-19 92.0
MS.gene03321.t1 AT1G76880 47.253 91 47 1 479 569 60 149 6.32e-19 91.3
MS.gene03321.t1 AT1G76890 49.062 320 130 7 52 357 38 338 8.10e-83 272
MS.gene03321.t1 AT1G76890 64.029 139 40 3 459 597 378 506 4.02e-49 181
MS.gene03321.t1 AT1G76890 44.565 92 50 1 52 142 394 485 1.81e-19 93.2
MS.gene03321.t1 AT1G76890 43.182 88 49 1 479 566 40 126 5.05e-17 85.5
MS.gene03321.t1 AT5G28300 36.789 299 139 9 281 569 300 558 2.63e-44 168
MS.gene03321.t1 AT5G28300 41.667 108 52 4 48 144 452 559 2.51e-15 80.1
MS.gene03321.t1 AT5G03680 34.202 307 142 7 55 356 119 370 8.18e-44 166
MS.gene03321.t1 AT5G03680 44.211 95 51 2 480 573 119 212 5.05e-19 91.7
MS.gene03321.t1 AT1G33240 59.649 114 35 1 54 167 61 163 3.41e-38 150
MS.gene03321.t1 AT1G33240 59.649 114 35 1 54 167 61 163 6.74e-38 150
MS.gene03321.t1 AT3G10000 57.143 105 43 2 38 140 71 175 1.36e-30 126
MS.gene03321.t1 AT3G10000 44.086 93 51 1 476 567 84 176 1.50e-20 95.9
MS.gene03321.t1 AT3G10000 53.846 104 38 2 38 140 71 165 7.59e-27 114
MS.gene03321.t1 AT3G10000 41.304 92 45 1 476 567 84 166 2.08e-17 85.9
MS.gene03321.t1 AT5G47660 51.685 89 41 1 480 568 303 389 8.18e-22 98.6
MS.gene03321.t1 AT5G47660 47.059 85 40 3 55 137 303 384 4.57e-14 75.1
MS.gene03321.t1 AT1G33240 38.655 119 71 2 55 171 396 514 3.18e-19 92.4
MS.gene03321.t1 AT1G33240 54.430 79 25 1 89 167 57 124 1.96e-18 90.1

Find 195 sgRNAs with CRISPR-Local

Find 238 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAAAGATGCAAGTGTTAA+AGG 0.186987 6.2:-31026198 MS.gene03321:CDS
TTCAGGTTTGATGAAGAAAA+TGG 0.194543 6.2:-31023832 MS.gene03321:CDS
CCATTATGGGAGGAGATTTC+AGG 0.224552 6.2:-31023849 MS.gene03321:CDS
TTTACCACCTCTTCCTTCTT+TGG 0.238671 6.2:+31025018 None:intergenic
ATGGACCTAAAGGGCCATTA+TGG 0.251711 6.2:-31023863 MS.gene03321:CDS
TCGGTGTCGGTGTTGGTGTT+GGG 0.265380 6.2:+31024213 None:intergenic
GATATGAAGTACCAAGAAAA+TGG 0.297874 6.2:-31023882 MS.gene03321:CDS
GGACATGTCTTTGAATCTTC+TGG 0.297895 6.2:+31023720 None:intergenic
TCCTCCCATAATGGCCCTTT+AGG 0.309914 6.2:+31023858 None:intergenic
GTTGTTGTTGATGATGGTAT+TGG 0.315589 6.2:+31024731 None:intergenic
AACAGGCGCCACCAGCAGCC+AGG 0.316128 6.2:-31023566 MS.gene03321:CDS
GGTGGTGGTGGATCAATTTC+AGG 0.335799 6.2:-31026348 MS.gene03321:CDS
GGAGTTGCACAAGAGGTTCT+TGG 0.339414 6.2:-31024483 MS.gene03321:CDS
GTCGGTGTCGGTGTTGGTGT+TGG 0.352301 6.2:+31024212 None:intergenic
GTCACATCCGCCCTGGCTGC+TGG 0.353901 6.2:+31023555 None:intergenic
TACTTTGGCTAATAGGAAAA+TGG 0.355696 6.2:-31025116 MS.gene03321:intron
GTTGAAGATAAGGTCTGATA+TGG 0.365393 6.2:-31026229 MS.gene03321:CDS
AGAGGGTTATTAGTATTTGT+AGG 0.377717 6.2:+31024701 None:intergenic
TACTAAAGATGCTGCTGTTA+TGG 0.378392 6.2:-31024342 MS.gene03321:CDS
AAAGCAACTGTTTCTTGTCT+TGG 0.384139 6.2:+31026252 None:intergenic
TCAGGTTTGATGAAGAAAAT+GGG 0.384923 6.2:-31023831 MS.gene03321:CDS
AATAGGAAAATGGCAGATCT+TGG 0.385060 6.2:-31025106 MS.gene03321:intron
CAAGTGTTAAAGGTCCCTTA+TGG 0.386222 6.2:-31026188 MS.gene03321:CDS
TTGAGGTGGTGGTGGTTTGT+TGG 0.387596 6.2:+31023407 None:intergenic
ACTGGCAATGGTGCTGCTGC+TGG 0.390612 6.2:+31024188 None:intergenic
GCAATGGCCTCCACAACAAC+AGG 0.393419 6.2:-31023583 MS.gene03321:CDS
TGAAGAAAATGGGGTACAAT+AGG 0.394111 6.2:-31023821 MS.gene03321:CDS
ACAGCAGCAAGTGACGAATA+TGG 0.394354 6.2:-31024009 MS.gene03321:CDS
TGCAAAGGATTAATAGAGAA+AGG 0.396339 6.2:-31024397 MS.gene03321:CDS
CAAAGAGGTGCAAAGAGAAA+TGG 0.396790 6.2:-31023794 MS.gene03321:CDS
CCTGAAATCTCCTCCCATAA+TGG 0.399545 6.2:+31023849 None:intergenic
AGGGGTGGGAATAGTACTAA+TGG 0.401850 6.2:+31024880 None:intergenic
AACGATGATGGCACCGTTGA+TGG 0.403172 6.2:-31023619 MS.gene03321:CDS
GTCGGTGTTGGTGTTGGGGT+TGG 0.406448 6.2:+31024218 None:intergenic
CAGTTGCTTTGTTGAAGATA+AGG 0.412788 6.2:-31026239 MS.gene03321:CDS
GACTCAACAGTGTTGGGAAC+AGG 0.413588 6.2:-31026411 MS.gene03321:CDS
CCTTGAAACTTCATCCCATA+AGG 0.419165 6.2:+31026173 None:intergenic
GGAGTTTGTGTTTGAGTTTG+TGG 0.419992 6.2:+31024902 None:intergenic
GAGGGTGTGGATAGAAGTTT+TGG 0.422223 6.2:-31026288 MS.gene03321:CDS
TGTGTTTGAGTTTGTGGTGG+TGG 0.423701 6.2:+31024908 None:intergenic
AAGTTCGTCTTCGACTTCTT+CGG 0.423944 6.2:-31024609 MS.gene03321:CDS
AGAAATGAAGCTGTTGTTGT+AGG 0.430108 6.2:+31024860 None:intergenic
GTAATAGTAATTTGAGGAAG+AGG 0.435660 6.2:+31024683 None:intergenic
TGTGTGTAAGACATTGGAAT+TGG 0.436193 6.2:+31024776 None:intergenic
ACCAACTTGATGCTCTATAC+AGG 0.438141 6.2:-31023689 MS.gene03321:CDS
TGGACCTAAAGGGCCATTAT+GGG 0.446325 6.2:-31023862 MS.gene03321:CDS
GGTGGTGGTGGTGTTATTGA+AGG 0.449272 6.2:+31024923 None:intergenic
GGTATTGCTGGTATTGGTAT+TGG 0.450653 6.2:+31024149 None:intergenic
ACGGTGTTGTTGTTCAATAC+AGG 0.451355 6.2:+31024278 None:intergenic
GGAACAGGAGGAGGAAGCTC+AGG 0.452871 6.2:-31026396 MS.gene03321:CDS
AAGTGTTAAAGGTCCCTTAT+GGG 0.453094 6.2:-31026187 MS.gene03321:CDS
GACGGAAGAGGAAGAGGAAA+TGG 0.453743 6.2:-31024553 MS.gene03321:CDS
CGAATCGACGGAAGAGGAAG+AGG 0.460674 6.2:-31024559 MS.gene03321:CDS
GGTGTAGGTATTGCTGGTAT+TGG 0.461156 6.2:+31024143 None:intergenic
AGCTGCTGCGTCGAGGCCTG+AGG 0.462044 6.2:-31023643 MS.gene03321:CDS
GAAATGAAGCTGTTGTTGTA+GGG 0.465028 6.2:+31024861 None:intergenic
AATGGTGCTGCTGCTGGTGT+CGG 0.467443 6.2:+31024194 None:intergenic
GCTGCTGCTGGTGTCGGTGT+CGG 0.467777 6.2:+31024200 None:intergenic
CCTTATGGGATGAAGTTTCA+AGG 0.471695 6.2:-31026173 MS.gene03321:intron
GCATCAAGTTGGTGAAAGTA+AGG 0.472098 6.2:+31023699 None:intergenic
CTAGGGGACTCAACAGTGTT+GGG 0.473609 6.2:-31026417 MS.gene03321:CDS
TGTGGAGGCCATTGCTGCTC+CGG 0.474042 6.2:+31023591 None:intergenic
GGCAATGGTACTGCTGGTAC+TGG 0.477694 6.2:+31024170 None:intergenic
GTTTGAGTTTGTGGTGGTGG+TGG 0.478900 6.2:+31024911 None:intergenic
TGGAAGTAGTAGAAATGAAG+AGG 0.480126 6.2:-31026307 MS.gene03321:CDS
GCAAAGGATTAATAGAGAAA+GGG 0.481748 6.2:-31024396 MS.gene03321:CDS
TACCAAGAAAATGGACCTAA+AGG 0.481995 6.2:-31023873 MS.gene03321:CDS
GCTGGTGGCGCCTGTTGTTG+TGG 0.482373 6.2:+31023573 None:intergenic
TTTCTTTGAGAGACTAATGA+AGG 0.482390 6.2:-31024525 MS.gene03321:CDS
CTTGAAACTTCATCCCATAA+GGG 0.483873 6.2:+31026174 None:intergenic
TAGTAGAAATGAAGAGGGTG+TGG 0.484511 6.2:-31026301 MS.gene03321:CDS
GAGGGTTATTAGTATTTGTA+GGG 0.485687 6.2:+31024702 None:intergenic
TGGTGGAAAATGTGTAGGGT+TGG 0.486037 6.2:+31024751 None:intergenic
CGGTGTCGGTGTTGGTGTTG+GGG 0.486815 6.2:+31024214 None:intergenic
GGAAACGACAACAATGGAAG+GGG 0.487557 6.2:-31024585 MS.gene03321:CDS
CTCCATGGTCACATCCGCCC+TGG 0.491677 6.2:+31023548 None:intergenic
ATAGGAAAATGGCAGATCTT+GGG 0.492836 6.2:-31025105 MS.gene03321:intron
ACCAAGAAAATGGACCTAAA+GGG 0.493139 6.2:-31023872 MS.gene03321:CDS
ACATCAGCAGCAGCAACAAC+AGG 0.496241 6.2:-31024042 MS.gene03321:CDS
GCAGCAGCAACAACAGGTTC+AGG 0.497898 6.2:-31024036 MS.gene03321:CDS
GCTGGTGTCGGTGTCGGTGT+TGG 0.501369 6.2:+31024206 None:intergenic
GGGGATCGAATCGACGGAAG+AGG 0.501747 6.2:-31024565 MS.gene03321:CDS
GGAATTGGAAGTGTAGTTGA+TGG 0.503022 6.2:+31024791 None:intergenic
TGTTGCGGTGTAGGTATTGC+TGG 0.503047 6.2:+31024137 None:intergenic
GGCACCGTTGATGGTTCAGC+CGG 0.506059 6.2:-31023610 MS.gene03321:CDS
TGTTGCTGCTGCTGATGTTG+TGG 0.506243 6.2:+31024047 None:intergenic
GAAGGTGATTGATGCATTGA+AGG 0.506401 6.2:+31024941 None:intergenic
AAAGAGGTGCAAAGAGAAAT+GGG 0.507157 6.2:-31023793 MS.gene03321:CDS
GGAGGAGGAAGCTCAGGAGA+TGG 0.512647 6.2:-31026390 MS.gene03321:CDS
GTTTGAACTTGTTGCGGTGT+AGG 0.516119 6.2:+31024128 None:intergenic
CACTCCTATGCAGCTATGCT+AGG 0.516756 6.2:-31026435 None:intergenic
AACAGCACCGGTCATTCCTC+AGG 0.519741 6.2:-31024081 MS.gene03321:CDS
GGTGCCATCATCGTTCCCTC+AGG 0.524674 6.2:+31023627 None:intergenic
ACTCCTATGCAGCTATGCTA+GGG 0.525198 6.2:-31026434 None:intergenic
GAGGTGCTAGAGAAGAAGCT+TGG 0.525337 6.2:-31024433 MS.gene03321:CDS
GAGAAAAGAGAAAGAGAGAG+AGG 0.527477 6.2:-31024452 MS.gene03321:CDS
GGAAGCTCAGGAGATGGAGC+AGG 0.527517 6.2:-31026384 MS.gene03321:CDS
TGGTTCAGCCGGAGCAGCAA+TGG 0.528420 6.2:-31023599 MS.gene03321:CDS
GCTAGGGGACTCAACAGTGT+TGG 0.529101 6.2:-31026418 MS.gene03321:CDS
ACAGTGTTGGGAACAGGAGG+AGG 0.532710 6.2:-31026405 MS.gene03321:CDS
GGGGTGGGAATAGTACTAAT+GGG 0.535590 6.2:+31024881 None:intergenic
TGATGCATGCAAGTTCATCT+AGG 0.535689 6.2:-31023953 MS.gene03321:CDS
AACAAGAGGAGTTGCACAAG+AGG 0.535913 6.2:-31024490 MS.gene03321:CDS
GAAATATTAGCGAATGAAGA+TGG 0.536488 6.2:+31024653 None:intergenic
TGTTGTTGCACTGTTACAGT+TGG 0.536680 6.2:+31024104 None:intergenic
GCTGCTGCGTCGAGGCCTGA+GGG 0.536821 6.2:-31023642 MS.gene03321:CDS
GCTTACCATGATGGTGGTGG+TGG 0.537546 6.2:-31026360 MS.gene03321:CDS
ACATCCGCCCTGGCTGCTGG+TGG 0.538679 6.2:+31023558 None:intergenic
TGCTCCGGCTGAACCATCAA+CGG 0.540154 6.2:+31023606 None:intergenic
TAATAGTAATTTGAGGAAGA+GGG 0.542471 6.2:+31024684 None:intergenic
GGTATTGGTGGAAAATGTGT+AGG 0.543430 6.2:+31024746 None:intergenic
GGCGAAGCCTGAGGAATGAC+CGG 0.543584 6.2:+31024074 None:intergenic
GAGGCCTGAGGGAACGATGA+TGG 0.544953 6.2:-31023631 MS.gene03321:CDS
GGAGGTGTAGAGTTTAACAA+TGG 0.547437 6.2:+31024827 None:intergenic
TGAAGGAAAGCAACAAGAAG+AGG 0.547925 6.2:-31023743 MS.gene03321:CDS
GGAAGAGGTGGTAAATCAGA+TGG 0.550653 6.2:-31025010 MS.gene03321:CDS
TTGGATTGTGTGTAAGACAT+TGG 0.551286 6.2:+31024770 None:intergenic
ACAGGCGCCACCAGCAGCCA+GGG 0.555235 6.2:-31023565 MS.gene03321:CDS
GTGCTAGAGAAGAAGCTTGG+AGG 0.555286 6.2:-31024430 MS.gene03321:CDS
TTGTTGTTGTTGAGGAATGA+CGG 0.557825 6.2:+31024259 None:intergenic
TATTAGCGAATGAAGATGGT+GGG 0.558390 6.2:+31024657 None:intergenic
GTTGTTGATGATGGTATTGG+TGG 0.559014 6.2:+31024734 None:intergenic
TGCTGCTGATGTTGTGGCAA+CGG 0.560332 6.2:+31024053 None:intergenic
GAGGAAACGACAACAATGGA+AGG 0.562272 6.2:-31024587 MS.gene03321:CDS
TGCGGCGCTTGTTGTTGTTG+AGG 0.562772 6.2:+31024251 None:intergenic
TCAACAACAACAAGCGCCGC+AGG 0.568754 6.2:-31024249 MS.gene03321:CDS
TGAAGCTGTTGTTGTAGGGG+TGG 0.568902 6.2:+31024865 None:intergenic
ATTAGCGAATGAAGATGGTG+GGG 0.569029 6.2:+31024658 None:intergenic
TATCACAAGAGAACCAAAGA+AGG 0.569305 6.2:-31025031 MS.gene03321:CDS
GGAGGTTGCAAGAGATGCAA+AGG 0.569352 6.2:-31024412 MS.gene03321:CDS
TGATCGGCCGCGTCGAGATG+AGG 0.570258 6.2:-31023505 MS.gene03321:CDS
TTTCAGGTGATGATGAAAGA+GGG 0.571339 6.2:-31026332 MS.gene03321:CDS
TTGATCCACCACCACCATCA+TGG 0.573497 6.2:+31026355 None:intergenic
AAGAGAACCAAAGAAGGAAG+AGG 0.573797 6.2:-31025025 MS.gene03321:CDS
TTCATTCGCTAATATTTCAG+CGG 0.578885 6.2:-31024648 MS.gene03321:CDS
TTCGTCTTCGACTTCTTCGG+AGG 0.579514 6.2:-31024606 MS.gene03321:CDS
CAGGCAGAAGAACAAGGTGG+AGG 0.580136 6.2:-31023670 MS.gene03321:CDS
CAGGTTTGATGAAGAAAATG+GGG 0.580467 6.2:-31023830 MS.gene03321:CDS
GCTGGTATTGGTATTGGCAA+TGG 0.581527 6.2:+31024155 None:intergenic
GGTATTGGCAATGGTACTGC+TGG 0.582926 6.2:+31024164 None:intergenic
GGTACTGCTGGTACTGGCAA+TGG 0.588980 6.2:+31024176 None:intergenic
GGAGCAGGAGCTTACCATGA+TGG 0.589395 6.2:-31026369 MS.gene03321:CDS
GTTTGTGTTTGAGTTTGTGG+TGG 0.590703 6.2:+31024905 None:intergenic
CTGAGAATGCTGAGAATGAT+CGG 0.591465 6.2:-31023521 MS.gene03321:CDS
ATTTCAGGTGATGATGAAAG+AGG 0.592121 6.2:-31026333 MS.gene03321:CDS
AGAACCAAAGAAGGAAGAGG+TGG 0.595193 6.2:-31025022 MS.gene03321:CDS
GATGACGAGGACGAAGATGA+AGG 0.597081 6.2:-31023453 MS.gene03321:CDS
AGCATTCTCAGCATCCTCCA+TGG 0.598685 6.2:+31023533 None:intergenic
GAATATTATGACGATGATGA+CGG 0.600596 6.2:-31023480 MS.gene03321:CDS
GGCGCCACCAGCAGCCAGGG+CGG 0.602641 6.2:-31023562 MS.gene03321:CDS
AGGGTGCAGCTGCTGCGTCG+AGG 0.603837 6.2:-31023650 MS.gene03321:CDS
GGAAGTAGTAGAAATGAAGA+GGG 0.606377 6.2:-31026306 MS.gene03321:CDS
TTCGGAGGAAACGACAACAA+TGG 0.607000 6.2:-31024591 MS.gene03321:CDS
GGAGGTTGTTGAGAAACAAG+AGG 0.607799 6.2:-31024504 MS.gene03321:CDS
CTTTGAGAGACTAATGAAGG+AGG 0.607887 6.2:-31024522 MS.gene03321:CDS
GCCTGTATAGAGCATCAAGT+TGG 0.608740 6.2:+31023688 None:intergenic
GAAGAGGAAGAGGAAATGGA+AGG 0.609651 6.2:-31024549 MS.gene03321:CDS
TTAGCGAATGAAGATGGTGG+GGG 0.612373 6.2:+31024659 None:intergenic
CAAGTATTTCAAGAAAGTGA+AGG 0.613019 6.2:-31023760 MS.gene03321:CDS
GTTGATGGAACAGTGGTGGT+AGG 0.616670 6.2:+31024806 None:intergenic
GTATTGGTGGAAAATGTGTA+GGG 0.617041 6.2:+31024747 None:intergenic
AAGGTGATTGATGCATTGAA+GGG 0.619014 6.2:+31024942 None:intergenic
TCAACAGTGTTGGGAACAGG+AGG 0.620361 6.2:-31026408 MS.gene03321:CDS
GATGGAACAGTGGTGGTAGG+AGG 0.624878 6.2:+31024809 None:intergenic
GAAGCTGTTGTTGTAGGGGT+GGG 0.625788 6.2:+31024866 None:intergenic
TCTATACAGGCAGAAGAACA+AGG 0.628687 6.2:-31023676 MS.gene03321:CDS
ATATTAGCGAATGAAGATGG+TGG 0.629833 6.2:+31024656 None:intergenic
ACCTAAAGGGCCATTATGGG+AGG 0.631216 6.2:-31023859 MS.gene03321:CDS
TGTGGCAACGGCGAAGCCTG+AGG 0.633518 6.2:+31024065 None:intergenic
TTCAGGTGATGATGAAAGAG+GGG 0.634874 6.2:-31026331 MS.gene03321:CDS
AGCCAGGGCGGATGTGACCA+TGG 0.636181 6.2:-31023550 MS.gene03321:CDS
GGTGTAGAGTTTAACAATGG+AGG 0.640467 6.2:+31024830 None:intergenic
CTCCTATGCAGCTATGCTAG+GGG 0.640615 6.2:-31026433 None:intergenic
AGGAAACGACAACAATGGAA+GGG 0.641866 6.2:-31024586 MS.gene03321:CDS
AGGCAGAAGAACAAGGTGGA+GGG 0.643787 6.2:-31023669 MS.gene03321:CDS
GTTGGAGTTTGAACTTGTTG+CGG 0.644658 6.2:+31024122 None:intergenic
GGAGCTTACCATGATGGTGG+TGG 0.649488 6.2:-31026363 MS.gene03321:CDS
GTGTTGTTGTTCAATACAGG+AGG 0.651178 6.2:+31024281 None:intergenic
AGTGCAACAACAAACAGCAC+CGG 0.652497 6.2:-31024093 MS.gene03321:CDS
GGGGTTGGTGTAGTTTCCTG+CGG 0.653086 6.2:+31024233 None:intergenic
GGTGGCGCCTGTTGTTGTGG+AGG 0.655534 6.2:+31023576 None:intergenic
TCAGGTGATGATGAAAGAGG+GGG 0.658562 6.2:-31026330 MS.gene03321:CDS
AAATGAAGCTGTTGTTGTAG+GGG 0.668647 6.2:+31024862 None:intergenic
GAAACGACAACAATGGAAGG+GGG 0.686144 6.2:-31024584 MS.gene03321:CDS
TGCATGCAAGTTCATCTAGG+TGG 0.686396 6.2:-31023950 MS.gene03321:CDS
GCAGGAGCTTACCATGATGG+TGG 0.707615 6.2:-31026366 MS.gene03321:CDS
GTTGCGAAAAGTGACAACAA+TGG 0.712598 6.2:-31023984 MS.gene03321:CDS
AAGTGTAGTTGATGGAACAG+TGG 0.713309 6.2:+31024799 None:intergenic
AGGTAGTGACAATTATGAAG+TGG 0.722373 6.2:-31023433 MS.gene03321:CDS
GGTACAATAGGAATGCAAAG+AGG 0.724275 6.2:-31023809 MS.gene03321:CDS
TGTAGTTGATGGAACAGTGG+TGG 0.725823 6.2:+31024802 None:intergenic
CAGGGCGGATGTGACCATGG+AGG 0.727693 6.2:-31023547 MS.gene03321:CDS
ATACAGGCAGAAGAACAAGG+TGG 0.746845 6.2:-31023673 MS.gene03321:CDS
TATTCTTCCTCATCTCGACG+CGG 0.761362 6.2:+31023498 None:intergenic
TGATGACGGTGATGATGACG+AGG 0.768255 6.2:-31023466 MS.gene03321:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGAAAAAAATAAAATTTC+TGG + chr6.2:31024663-31024682 None:intergenic 10.0%
!! TAAATTAAAAATATACATGA+GGG + chr6.2:31024065-31024084 None:intergenic 10.0%
!! TTAAATTAAAAATATACATG+AGG + chr6.2:31024066-31024085 None:intergenic 10.0%
!!! ATTAATTTTGTCTTTATTTT+TGG - chr6.2:31024684-31024703 MS.gene03321:CDS 10.0%
!!! TATTTTTTTTATCTTTGATT+TGG - chr6.2:31023972-31023991 MS.gene03321:CDS 10.0%
!!! TTAATTTTGTCTTTATTTTT+GGG - chr6.2:31024685-31024704 MS.gene03321:CDS 10.0%
!! GTTGAAAAATAAAAATATGA+TGG - chr6.2:31024309-31024328 MS.gene03321:CDS 15.0%
!!! AAATTTTTCTTTGCATTTTT+TGG + chr6.2:31024758-31024777 None:intergenic 15.0%
!!! TATTTTTCAACACTAAAAAT+GGG + chr6.2:31024300-31024319 None:intergenic 15.0%
!!! TTATTTTTCAACACTAAAAA+TGG + chr6.2:31024301-31024320 None:intergenic 15.0%
!! AACTTAAGTGATTAAGATAA+GGG + chr6.2:31024501-31024520 None:intergenic 20.0%
!! TAACTTAAGTGATTAAGATA+AGG + chr6.2:31024502-31024521 None:intergenic 20.0%
!! TCTTATCACATTAAATCTTT+AGG + chr6.2:31024635-31024654 None:intergenic 20.0%
!!! ATTAAAAAGTTTGTTTCTCA+TGG + chr6.2:31024377-31024396 None:intergenic 20.0%
!!! TTCAAGTTTGTAACTTTATT+TGG + chr6.2:31024230-31024249 None:intergenic 20.0%
!!! TTTTTTTTTCAGATTTCAGA+AGG + chr6.2:31023761-31023780 None:intergenic 20.0%
! AAAAATGGGTAACTGAAATA+AGG + chr6.2:31024286-31024305 None:intergenic 25.0%
! AAAATGGGTAACTGAAATAA+GGG + chr6.2:31024285-31024304 None:intergenic 25.0%
! TAATAGTAATTTGAGGAAGA+GGG + chr6.2:31025143-31025162 None:intergenic 25.0%
! TAGGATAAGAAGCAATTAAT+TGG + chr6.2:31024616-31024635 None:intergenic 25.0%
! TCAATAATTCAGATTTCTCA+AGG + chr6.2:31023913-31023932 None:intergenic 25.0%
!!! TATATCGAAGTTGATGTAAT+TGG + chr6.2:31024456-31024475 None:intergenic 25.0%
AGACAACCAAAGAATTGAAA+TGG + chr6.2:31024531-31024550 None:intergenic 30.0%
AGAGGGTTATTAGTATTTGT+AGG + chr6.2:31025126-31025145 None:intergenic 30.0%
ATAATTCAGATTTCTCAAGG+TGG + chr6.2:31023910-31023929 None:intergenic 30.0%
CAAAATCTTTGTTCACACTT+TGG - chr6.2:31024339-31024358 MS.gene03321:CDS 30.0%
CAAGTATTTCAAGAAAGTGA+AGG - chr6.2:31026064-31026083 MS.gene03321:intron 30.0%
GAAATATTAGCGAATGAAGA+TGG + chr6.2:31025174-31025193 None:intergenic 30.0%
GAATATTATGACGATGATGA+CGG - chr6.2:31026344-31026363 MS.gene03321:CDS 30.0%
GAGGGTTATTAGTATTTGTA+GGG + chr6.2:31025125-31025144 None:intergenic 30.0%
GCAAAGGATTAATAGAGAAA+GGG - chr6.2:31025428-31025447 MS.gene03321:intron 30.0%
GTAATAGTAATTTGAGGAAG+AGG + chr6.2:31025144-31025163 None:intergenic 30.0%
TACTTTGGCTAATAGGAAAA+TGG - chr6.2:31024708-31024727 MS.gene03321:CDS 30.0%
TCAGGTTTGATGAAGAAAAT+GGG - chr6.2:31025993-31026012 MS.gene03321:intron 30.0%
TGCAAAGGATTAATAGAGAA+AGG - chr6.2:31025427-31025446 MS.gene03321:intron 30.0%
TTCAAAGATGCAAGTGTTAA+AGG - chr6.2:31023626-31023645 MS.gene03321:CDS 30.0%
TTCATTCGCTAATATTTCAG+CGG - chr6.2:31025176-31025195 MS.gene03321:intron 30.0%
! GATATGAAGTACCAAGAAAA+TGG - chr6.2:31025942-31025961 MS.gene03321:intron 30.0%
! TTCAGGTTTGATGAAGAAAA+TGG - chr6.2:31025992-31026011 MS.gene03321:intron 30.0%
! TTTCTTTGAGAGACTAATGA+AGG - chr6.2:31025299-31025318 MS.gene03321:intron 30.0%
!! GGAAGAAAATCTTTGCTTTT+TGG + chr6.2:31024261-31024280 None:intergenic 30.0%
!! TTTGTTGTTGTTGTTGATGA+TGG + chr6.2:31025102-31025121 None:intergenic 30.0%
!!! GTCTTTATTTTTGGGTACTT+TGG - chr6.2:31024693-31024712 MS.gene03321:CDS 30.0%
!!! TTTTTTCAGATTTCAGAAGG+TGG + chr6.2:31023758-31023777 None:intergenic 30.0%
AAATGAAGCTGTTGTTGTAG+GGG + chr6.2:31024965-31024984 None:intergenic 35.0%
AAGGTGATTGATGCATTGAA+GGG + chr6.2:31024885-31024904 None:intergenic 35.0%
AAGTGATTAAGATAAGGGAG+AGG + chr6.2:31024496-31024515 None:intergenic 35.0%
AAGTGTTAAAGGTCCCTTAT+GGG - chr6.2:31023637-31023656 MS.gene03321:CDS 35.0%
AATAGGAAAATGGCAGATCT+TGG - chr6.2:31024718-31024737 MS.gene03321:CDS 35.0%
ACCAAGAAAATGGACCTAAA+GGG - chr6.2:31025952-31025971 MS.gene03321:intron 35.0%
AGAAATGAAGCTGTTGTTGT+AGG + chr6.2:31024967-31024986 None:intergenic 35.0%
AGGTAGTGACAATTATGAAG+TGG - chr6.2:31026391-31026410 MS.gene03321:CDS 35.0%
ATAGGAAAATGGCAGATCTT+GGG - chr6.2:31024719-31024738 MS.gene03321:CDS 35.0%
ATATTAGCGAATGAAGATGG+TGG + chr6.2:31025171-31025190 None:intergenic 35.0%
CAGGTTTGATGAAGAAAATG+GGG - chr6.2:31025994-31026013 MS.gene03321:intron 35.0%
CTTGAAACTTCATCCCATAA+GGG + chr6.2:31023653-31023672 None:intergenic 35.0%
CTTGCTCCATTTCAATTCTT+TGG - chr6.2:31024522-31024541 MS.gene03321:CDS 35.0%
GAAATGAAGCTGTTGTTGTA+GGG + chr6.2:31024966-31024985 None:intergenic 35.0%
GGAAGTAGTAGAAATGAAGA+GGG - chr6.2:31023518-31023537 MS.gene03321:CDS 35.0%
GTTGAAGATAAGGTCTGATA+TGG - chr6.2:31023595-31023614 MS.gene03321:CDS 35.0%
TACCAAGAAAATGGACCTAA+AGG - chr6.2:31025951-31025970 MS.gene03321:intron 35.0%
TACTAAAGATGCTGCTGTTA+TGG - chr6.2:31025482-31025501 MS.gene03321:intron 35.0%
TATCACAAGAGAACCAAAGA+AGG - chr6.2:31024793-31024812 MS.gene03321:CDS 35.0%
TATTAGCGAATGAAGATGGT+GGG + chr6.2:31025170-31025189 None:intergenic 35.0%
TGAAGAAAATGGGGTACAAT+AGG - chr6.2:31026003-31026022 MS.gene03321:intron 35.0%
TGGAAGTAGTAGAAATGAAG+AGG - chr6.2:31023517-31023536 MS.gene03321:CDS 35.0%
TGTGTGTAAGACATTGGAAT+TGG + chr6.2:31025051-31025070 None:intergenic 35.0%
TTGGATTGTGTGTAAGACAT+TGG + chr6.2:31025057-31025076 None:intergenic 35.0%
! AAAGAGGTGCAAAGAGAAAT+GGG - chr6.2:31026031-31026050 MS.gene03321:intron 35.0%
! AAAGCAACTGTTTCTTGTCT+TGG + chr6.2:31023575-31023594 None:intergenic 35.0%
! ATTTCAGGTGATGATGAAAG+AGG - chr6.2:31023491-31023510 MS.gene03321:CDS 35.0%
! CAGTTGCTTTGTTGAAGATA+AGG - chr6.2:31023585-31023604 MS.gene03321:CDS 35.0%
! GTATTGGTGGAAAATGTGTA+GGG + chr6.2:31025080-31025099 None:intergenic 35.0%
! TTGTTGTTGTTGAGGAATGA+CGG + chr6.2:31025568-31025587 None:intergenic 35.0%
! TTTCAGGTGATGATGAAAGA+GGG - chr6.2:31023492-31023511 MS.gene03321:CDS 35.0%
!! CATTGAAGGGTTGTTTTCAA+GGG + chr6.2:31024872-31024891 None:intergenic 35.0%
!! GAAGTTTTGGTGGTAATAGA+TGG - chr6.2:31023549-31023568 MS.gene03321:CDS 35.0%
!! GTTGTTGTTGATGATGGTAT+TGG + chr6.2:31025096-31025115 None:intergenic 35.0%
!! TTTTGGGTACTTTGGCTAAT+AGG - chr6.2:31024701-31024720 MS.gene03321:CDS 35.0%
AAGAGAACCAAAGAAGGAAG+AGG - chr6.2:31024799-31024818 MS.gene03321:CDS 40.0%
AAGTTCGTCTTCGACTTCTT+CGG - chr6.2:31025215-31025234 MS.gene03321:intron 40.0%
ACCAACTTGATGCTCTATAC+AGG - chr6.2:31026135-31026154 MS.gene03321:intron 40.0%
AGGAAACGACAACAATGGAA+GGG - chr6.2:31025238-31025257 MS.gene03321:intron 40.0%
ATGGGTAACTGAAATAAGGG+AGG + chr6.2:31024282-31024301 None:intergenic 40.0%
ATTAGCGAATGAAGATGGTG+GGG + chr6.2:31025169-31025188 None:intergenic 40.0%
CAAGTGTTAAAGGTCCCTTA+TGG - chr6.2:31023636-31023655 MS.gene03321:CDS 40.0%
CCTTATGGGATGAAGTTTCA+AGG - chr6.2:31023651-31023670 MS.gene03321:CDS 40.0%
CCTTGAAACTTCATCCCATA+AGG + chr6.2:31023654-31023673 None:intergenic 40.0%
CTGAGAATGCTGAGAATGAT+CGG - chr6.2:31026303-31026322 MS.gene03321:CDS 40.0%
GAAGGTGATTGATGCATTGA+AGG + chr6.2:31024886-31024905 None:intergenic 40.0%
GAGAAAAGAGAAAGAGAGAG+AGG - chr6.2:31025372-31025391 MS.gene03321:intron 40.0%
GGACATGTCTTTGAATCTTC+TGG + chr6.2:31026107-31026126 None:intergenic 40.0%
GGTACAATAGGAATGCAAAG+AGG - chr6.2:31026015-31026034 MS.gene03321:intron 40.0%
GGTGTAGAGTTTAACAATGG+AGG + chr6.2:31024997-31025016 None:intergenic 40.0%
GTTGCGAAAAGTGACAACAA+TGG - chr6.2:31025840-31025859 MS.gene03321:intron 40.0%
TAGTAGAAATGAAGAGGGTG+TGG - chr6.2:31023523-31023542 MS.gene03321:CDS 40.0%
TCTATACAGGCAGAAGAACA+AGG - chr6.2:31026148-31026167 MS.gene03321:intron 40.0%
TGAAGGAAAGCAACAAGAAG+AGG - chr6.2:31026081-31026100 MS.gene03321:intron 40.0%
TGATGCATGCAAGTTCATCT+AGG - chr6.2:31025871-31025890 MS.gene03321:intron 40.0%
TGTTGTTGCACTGTTACAGT+TGG + chr6.2:31025723-31025742 None:intergenic 40.0%
TTTACCACCTCTTCCTTCTT+TGG + chr6.2:31024809-31024828 None:intergenic 40.0%
! AATGCCTCAACCTCAGTTTT+TGG + chr6.2:31025900-31025919 None:intergenic 40.0%
! CAAAGAGGTGCAAAGAGAAA+TGG - chr6.2:31026030-31026049 MS.gene03321:intron 40.0%
! CTTTGAGAGACTAATGAAGG+AGG - chr6.2:31025302-31025321 MS.gene03321:intron 40.0%
! GGAATTGGAAGTGTAGTTGA+TGG + chr6.2:31025036-31025055 None:intergenic 40.0%
! GGAGGTGTAGAGTTTAACAA+TGG + chr6.2:31025000-31025019 None:intergenic 40.0%
! GGAGTTTGTGTTTGAGTTTG+TGG + chr6.2:31024925-31024944 None:intergenic 40.0%
! GGGGGTGTAATAGTAATTTG+AGG + chr6.2:31025150-31025169 None:intergenic 40.0%
! GTGTTGTTGTTCAATACAGG+AGG + chr6.2:31025546-31025565 None:intergenic 40.0%
! GTTTGTGTTTGAGTTTGTGG+TGG + chr6.2:31024922-31024941 None:intergenic 40.0%
! TTCAGGTGATGATGAAAGAG+GGG - chr6.2:31023493-31023512 MS.gene03321:CDS 40.0%
!! AAGTGTAGTTGATGGAACAG+TGG + chr6.2:31025028-31025047 None:intergenic 40.0%
!! ACGGTGTTGTTGTTCAATAC+AGG + chr6.2:31025549-31025568 None:intergenic 40.0%
!! GCATCAAGTTGGTGAAAGTA+AGG + chr6.2:31026128-31026147 None:intergenic 40.0%
!! GCATTGAAGGGTTGTTTTCA+AGG + chr6.2:31024873-31024892 None:intergenic 40.0%
!! GGTATTGCTGGTATTGGTAT+TGG + chr6.2:31025678-31025697 None:intergenic 40.0%
!! GGTATTGGTGGAAAATGTGT+AGG + chr6.2:31025081-31025100 None:intergenic 40.0%
!! GTTGGAGTTTGAACTTGTTG+CGG + chr6.2:31025705-31025724 None:intergenic 40.0%
!! GTTGTTGATGATGGTATTGG+TGG + chr6.2:31025093-31025112 None:intergenic 40.0%
AACAAGAGGAGTTGCACAAG+AGG - chr6.2:31025334-31025353 MS.gene03321:intron 45.0%
ACAGCAGCAAGTGACGAATA+TGG - chr6.2:31025815-31025834 MS.gene03321:intron 45.0%
AGAACCAAAGAAGGAAGAGG+TGG - chr6.2:31024802-31024821 MS.gene03321:CDS 45.0%
AGGGGTGGGAATAGTACTAA+TGG + chr6.2:31024947-31024966 None:intergenic 45.0%
AGTGCAACAACAAACAGCAC+CGG - chr6.2:31025731-31025750 MS.gene03321:intron 45.0%
ATACAGGCAGAAGAACAAGG+TGG - chr6.2:31026151-31026170 MS.gene03321:intron 45.0%
ATCTAGGTGGCCAAAAACTG+AGG - chr6.2:31025887-31025906 MS.gene03321:intron 45.0%
ATGGACCTAAAGGGCCATTA+TGG - chr6.2:31025961-31025980 MS.gene03321:intron 45.0%
CAGATTTCAGAAGGTGGCAT+TGG + chr6.2:31023752-31023771 None:intergenic 45.0%
CCATTATGGGAGGAGATTTC+AGG - chr6.2:31025975-31025994 MS.gene03321:intron 45.0%
CCTGAAATCTCCTCCCATAA+TGG + chr6.2:31025978-31025997 None:intergenic 45.0%
GAAACGACAACAATGGAAGG+GGG - chr6.2:31025240-31025259 MS.gene03321:intron 45.0%
GAAGAGGAAGAGGAAATGGA+AGG - chr6.2:31025275-31025294 MS.gene03321:intron 45.0%
GAGGAAACGACAACAATGGA+AGG - chr6.2:31025237-31025256 MS.gene03321:intron 45.0%
GGAAACGACAACAATGGAAG+GGG - chr6.2:31025239-31025258 MS.gene03321:intron 45.0%
GGAAGAGGTGGTAAATCAGA+TGG - chr6.2:31024814-31024833 MS.gene03321:CDS 45.0%
GGAGGTTGTTGAGAAACAAG+AGG - chr6.2:31025320-31025339 MS.gene03321:intron 45.0%
GGGGTGGGAATAGTACTAAT+GGG + chr6.2:31024946-31024965 None:intergenic 45.0%
TATTCTTCCTCATCTCGACG+CGG + chr6.2:31026329-31026348 None:intergenic 45.0%
TGCATGCAAGTTCATCTAGG+TGG - chr6.2:31025874-31025893 MS.gene03321:intron 45.0%
TGGACCTAAAGGGCCATTAT+GGG - chr6.2:31025962-31025981 MS.gene03321:intron 45.0%
TGGTGGAAAATGTGTAGGGT+TGG + chr6.2:31025076-31025095 None:intergenic 45.0%
TTCGGAGGAAACGACAACAA+TGG - chr6.2:31025233-31025252 MS.gene03321:intron 45.0%
! GCCCTTTAGGTCCATTTTCT+TGG + chr6.2:31025956-31025975 None:intergenic 45.0%
! GCCTGTATAGAGCATCAAGT+TGG + chr6.2:31026139-31026158 None:intergenic 45.0%
! GGTGTAGGTATTGCTGGTAT+TGG + chr6.2:31025684-31025703 None:intergenic 45.0%
! TCAGGTGATGATGAAAGAGG+GGG - chr6.2:31023494-31023513 MS.gene03321:CDS 45.0%
! TGTGTTTGAGTTTGTGGTGG+TGG + chr6.2:31024919-31024938 None:intergenic 45.0%
! TTAGCGAATGAAGATGGTGG+GGG + chr6.2:31025168-31025187 None:intergenic 45.0%
!! GAGGGTGTGGATAGAAGTTT+TGG - chr6.2:31023536-31023555 MS.gene03321:CDS 45.0%
!! GCTGGTATTGGTATTGGCAA+TGG + chr6.2:31025672-31025691 None:intergenic 45.0%
!! GGTGTGGATAGAAGTTTTGG+TGG - chr6.2:31023539-31023558 MS.gene03321:CDS 45.0%
!! GTTTGAACTTGTTGCGGTGT+AGG + chr6.2:31025699-31025718 None:intergenic 45.0%
!! TGTAGTTGATGGAACAGTGG+TGG + chr6.2:31025025-31025044 None:intergenic 45.0%
!! GAAAAATTAAATTAATAAAT+GGG + chr6.2:31023855-31023874 None:intergenic 5.0%
!! TGAAAAATTAAATTAATAAA+TGG + chr6.2:31023856-31023875 None:intergenic 5.0%
ACATCAGCAGCAGCAACAAC+AGG - chr6.2:31025782-31025801 MS.gene03321:intron 50.0%
ACCTAAAGGGCCATTATGGG+AGG - chr6.2:31025965-31025984 MS.gene03321:intron 50.0%
AGCATTCTCAGCATCCTCCA+TGG + chr6.2:31026294-31026313 None:intergenic 50.0%
AGGCAGAAGAACAAGGTGGA+GGG - chr6.2:31026155-31026174 MS.gene03321:intron 50.0%
CTAGGGGACTCAACAGTGTT+GGG - chr6.2:31023407-31023426 MS.gene03321:CDS 50.0%
GAAGCTGTTGTTGTAGGGGT+GGG + chr6.2:31024961-31024980 None:intergenic 50.0%
GACGGAAGAGGAAGAGGAAA+TGG - chr6.2:31025271-31025290 MS.gene03321:intron 50.0%
GATGACGAGGACGAAGATGA+AGG - chr6.2:31026371-31026390 MS.gene03321:CDS 50.0%
GGAGGTTGCAAGAGATGCAA+AGG - chr6.2:31025412-31025431 MS.gene03321:intron 50.0%
GGAGTTGCACAAGAGGTTCT+TGG - chr6.2:31025341-31025360 MS.gene03321:intron 50.0%
GTGCTAGAGAAGAAGCTTGG+AGG - chr6.2:31025394-31025413 MS.gene03321:intron 50.0%
GTGGCCAAAAACTGAGGTTG+AGG - chr6.2:31025893-31025912 MS.gene03321:intron 50.0%
TCCTCCCATAATGGCCCTTT+AGG + chr6.2:31025969-31025988 None:intergenic 50.0%
TGAAGCTGTTGTTGTAGGGG+TGG + chr6.2:31024962-31024981 None:intergenic 50.0%
TGCTGCTGATGTTGTGGCAA+CGG + chr6.2:31025774-31025793 None:intergenic 50.0%
TGTTGCTGCTGCTGATGTTG+TGG + chr6.2:31025780-31025799 None:intergenic 50.0%
TTCGTCTTCGACTTCTTCGG+AGG - chr6.2:31025218-31025237 MS.gene03321:intron 50.0%
TTGATCCACCACCACCATCA+TGG + chr6.2:31023472-31023491 None:intergenic 50.0%
! AACGATGATGGCACCGTTGA+TGG - chr6.2:31026205-31026224 MS.gene03321:CDS 50.0%
! GACTCAACAGTGTTGGGAAC+AGG - chr6.2:31023413-31023432 MS.gene03321:CDS 50.0%
! GAGGTGCTAGAGAAGAAGCT+TGG - chr6.2:31025391-31025410 MS.gene03321:intron 50.0%
! GTTGATGGAACAGTGGTGGT+AGG + chr6.2:31025021-31025040 None:intergenic 50.0%
! TCAACAGTGTTGGGAACAGG+AGG - chr6.2:31023416-31023435 MS.gene03321:CDS 50.0%
! TGTTGCGGTGTAGGTATTGC+TGG + chr6.2:31025690-31025709 None:intergenic 50.0%
!! GGTATTGGCAATGGTACTGC+TGG + chr6.2:31025663-31025682 None:intergenic 50.0%
!! GGTGGTGGTGGATCAATTTC+AGG - chr6.2:31023476-31023495 MS.gene03321:CDS 50.0%
!! GGTGGTGGTGGTGTTATTGA+AGG + chr6.2:31024904-31024923 None:intergenic 50.0%
!! GTTTGAGTTTGTGGTGGTGG+TGG + chr6.2:31024916-31024935 None:intergenic 50.0%
!! TGATGACGGTGATGATGACG+AGG - chr6.2:31026358-31026377 MS.gene03321:CDS 50.0%
!! TTGAGGTGGTGGTGGTTTGT+TGG + chr6.2:31026420-31026439 None:intergenic 50.0%
CAGGCAGAAGAACAAGGTGG+AGG - chr6.2:31026154-31026173 MS.gene03321:intron 55.0%
CGAATCGACGGAAGAGGAAG+AGG - chr6.2:31025265-31025284 MS.gene03321:intron 55.0%
GATGGAACAGTGGTGGTAGG+AGG + chr6.2:31025018-31025037 None:intergenic 55.0%
GCAATGGCCTCCACAACAAC+AGG - chr6.2:31026241-31026260 MS.gene03321:CDS 55.0%
GCAGCAGCAACAACAGGTTC+AGG - chr6.2:31025788-31025807 MS.gene03321:intron 55.0%
GCAGGAGCTTACCATGATGG+TGG - chr6.2:31023458-31023477 MS.gene03321:CDS 55.0%
GCTAGGGGACTCAACAGTGT+TGG - chr6.2:31023406-31023425 MS.gene03321:CDS 55.0%
GGAGCAGGAGCTTACCATGA+TGG - chr6.2:31023455-31023474 MS.gene03321:CDS 55.0%
GGCAATGGTACTGCTGGTAC+TGG + chr6.2:31025657-31025676 None:intergenic 55.0%
TGCTCCGGCTGAACCATCAA+CGG + chr6.2:31026221-31026240 None:intergenic 55.0%
TGGAAGGGGGATCGAATCGA+CGG - chr6.2:31025253-31025272 MS.gene03321:intron 55.0%
! ACAGTGTTGGGAACAGGAGG+AGG - chr6.2:31023419-31023438 MS.gene03321:CDS 55.0%
! GGTGATGATGAAAGAGGGGG+TGG - chr6.2:31023497-31023516 MS.gene03321:CDS 55.0%
! TCAACAACAACAAGCGCCGC+AGG - chr6.2:31025575-31025594 MS.gene03321:intron 55.0%
!! AACAGCACCGGTCATTCCTC+AGG - chr6.2:31025743-31025762 MS.gene03321:intron 55.0%
!! AATGGTGCTGCTGCTGGTGT+CGG + chr6.2:31025633-31025652 None:intergenic 55.0%
!! GCTTACCATGATGGTGGTGG+TGG - chr6.2:31023464-31023483 MS.gene03321:CDS 55.0%
!! GGAGCTTACCATGATGGTGG+TGG - chr6.2:31023461-31023480 MS.gene03321:CDS 55.0%
!! GGGGTTGGTGTAGTTTCCTG+CGG + chr6.2:31025594-31025613 None:intergenic 55.0%
!! GGTACTGCTGGTACTGGCAA+TGG + chr6.2:31025651-31025670 None:intergenic 55.0%
!! TCGGTGTCGGTGTTGGTGTT+GGG + chr6.2:31025614-31025633 None:intergenic 55.0%
!! TGCGGCGCTTGTTGTTGTTG+AGG + chr6.2:31025576-31025595 None:intergenic 55.0%
GAGGCCTGAGGGAACGATGA+TGG - chr6.2:31026193-31026212 MS.gene03321:CDS 60.0%
GGAACAGGAGGAGGAAGCTC+AGG - chr6.2:31023428-31023447 MS.gene03321:CDS 60.0%
GGAAGCTCAGGAGATGGAGC+AGG - chr6.2:31023440-31023459 MS.gene03321:CDS 60.0%
GGAGGAGGAAGCTCAGGAGA+TGG - chr6.2:31023434-31023453 MS.gene03321:CDS 60.0%
GGCGAAGCCTGAGGAATGAC+CGG + chr6.2:31025753-31025772 None:intergenic 60.0%
GGGGATCGAATCGACGGAAG+AGG - chr6.2:31025259-31025278 MS.gene03321:intron 60.0%
TGGTTCAGCCGGAGCAGCAA+TGG - chr6.2:31026225-31026244 MS.gene03321:CDS 60.0%
TGTGGAGGCCATTGCTGCTC+CGG + chr6.2:31026236-31026255 None:intergenic 60.0%
! GGTGCCATCATCGTTCCCTC+AGG + chr6.2:31026200-31026219 None:intergenic 60.0%
!! ACTGGCAATGGTGCTGCTGC+TGG + chr6.2:31025639-31025658 None:intergenic 60.0%
!! CGGTGTCGGTGTTGGTGTTG+GGG + chr6.2:31025613-31025632 None:intergenic 60.0%
!! GGCACCGTTGATGGTTCAGC+CGG - chr6.2:31026214-31026233 MS.gene03321:CDS 60.0%
!! GTCGGTGTCGGTGTTGGTGT+TGG + chr6.2:31025615-31025634 None:intergenic 60.0%
!! GTCGGTGTTGGTGTTGGGGT+TGG + chr6.2:31025609-31025628 None:intergenic 60.0%
AGCCAGGGCGGATGTGACCA+TGG - chr6.2:31026274-31026293 MS.gene03321:CDS 65.0%
CAGGGCGGATGTGACCATGG+AGG - chr6.2:31026277-31026296 MS.gene03321:CDS 65.0%
CTCCATGGTCACATCCGCCC+TGG + chr6.2:31026279-31026298 None:intergenic 65.0%
GGTGGCGCCTGTTGTTGTGG+AGG + chr6.2:31026251-31026270 None:intergenic 65.0%
TGATCGGCCGCGTCGAGATG+AGG - chr6.2:31026319-31026338 MS.gene03321:CDS 65.0%
TGTGGCAACGGCGAAGCCTG+AGG + chr6.2:31025762-31025781 None:intergenic 65.0%
! GCTGGTGGCGCCTGTTGTTG+TGG + chr6.2:31026254-31026273 None:intergenic 65.0%
!! GCTGCTGCTGGTGTCGGTGT+CGG + chr6.2:31025627-31025646 None:intergenic 65.0%
!! GCTGGTGTCGGTGTCGGTGT+TGG + chr6.2:31025621-31025640 None:intergenic 65.0%
AACAGGCGCCACCAGCAGCC+AGG - chr6.2:31026258-31026277 MS.gene03321:CDS 70.0%
ACAGGCGCCACCAGCAGCCA+GGG - chr6.2:31026259-31026278 MS.gene03321:CDS 70.0%
ACATCCGCCCTGGCTGCTGG+TGG + chr6.2:31026269-31026288 None:intergenic 70.0%
AGCTGCTGCGTCGAGGCCTG+AGG - chr6.2:31026181-31026200 MS.gene03321:CDS 70.0%
AGGGTGCAGCTGCTGCGTCG+AGG - chr6.2:31026174-31026193 MS.gene03321:CDS 70.0%
GCTGCTGCGTCGAGGCCTGA+GGG - chr6.2:31026182-31026201 MS.gene03321:CDS 70.0%
GTCACATCCGCCCTGGCTGC+TGG + chr6.2:31026272-31026291 None:intergenic 70.0%
! GGCGCCACCAGCAGCCAGGG+CGG - chr6.2:31026262-31026281 MS.gene03321:CDS 80.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 31023404 31026442 31023404 ID=MS.gene03321
chr6.2 mRNA 31023404 31026442 31023404 ID=MS.gene03321.t1;Parent=MS.gene03321
chr6.2 exon 31026174 31026442 31026174 ID=MS.gene03321.t1.exon1;Parent=MS.gene03321.t1
chr6.2 CDS 31026174 31026442 31026174 ID=cds.MS.gene03321.t1;Parent=MS.gene03321.t1
chr6.2 exon 31023404 31025123 31023404 ID=MS.gene03321.t1.exon2;Parent=MS.gene03321.t1
chr6.2 CDS 31023404 31025123 31023404 ID=cds.MS.gene03321.t1;Parent=MS.gene03321.t1
Gene Sequence

>MS.gene03321

ATGCTAGGGGACTCAACAGTGTTGGGAACAGGAGGAGGAAGCTCAGGAGATGGAGCAGGAGCTTACCATGATGGTGGTGGTGGATCAATTTCAGGTGATGATGAAAGAGGGGGTGGAAGTAGTAGAAATGAAGAGGGTGTGGATAGAAGTTTTGGTGGTAATAGATGGCCAAGACAAGAAACAGTTGCTTTGTTGAAGATAAGGTCTGATATGGATGTTGCTTTCAAAGATGCAAGTGTTAAAGGTCCCTTATGGGATGAAGTTTCAAGGTTAGTCAAAAAAAAAAATTCAATTTTTTTCATTTTTTTGATTTTAATTATTTGAGATTGTATTCAACTTGTTAATCCAATGCCACCTTCTGAAATCTGAAAAAAAAAATTCACTTTGAGTTCATGTTTTGTGTATTAATTTTTTTTTCAATGTGTTTCAATTTTCATTTCATCTCAATCCCATTTATTAATTTAATTTTTCAATTTTTGATATATTTTTTACTTGATTCAATGCCACCTTGAGAAATCTGAATTATTGAATGTGTTTCAATTTTGATTTTGATTTCACTTCAATTTCATATTTTTTTTATCTTTGATTTGGACTTGTTTTCATGTAAAGATGAATTTTTTAATTTTTTTTTGTTATTATTGAATTGATTATTGAAGTTCCCTCATGTATATTTTTAATTTAAAGATATAAGTACTGTTTATGAAAAATTAAATAATTTAGAGATGTGTGCAAGCATCTCTCTATGACTCTATCTATCTATGATATGATGACTTTGATGTGATTTGCTTTTCTGACATTCATTTTGATACATGTTGTATTTTTACCAAATAAAGTTACAAACTTGAATTGAGTCACCAAAAAGCAAAGATTTTCTTCCTCCCTTATTTCAGTTACCCATTTTTAGTGTTGAAAAATAAAAATATGATGGTAGATTACAAAATCTTTGTTCACACTTTGGTTCATGTGTTTTCCATGAGAAACAAACTTTTTAATTTTTTCAACATTTTACGCTATTTAATTTCTTGTCATTATTAAAAAAAATCTTCACTCCAATTACATCAACTTCGATATATAATAATTTTTTATTCACCTCTCCCTTATCTTAATCACTTAAGTTACTTGCTCCATTTCAATTCTTTGGTTGTCTAAATTGATTTATTTAGTTTTTTTATTATTATTTTTGACTCAATTCATTTATTATCTTATGCACCAATTAATTGCTTCTTATCCTAAAGATTTAATGTGATAAGAAAAAGCCAGAAATTTTATTTTTTTCTTTAATTAATTTTGTCTTTATTTTTGGGTACTTTGGCTAATAGGAAAATGGCAGATCTTGGGTATCAAAGAAACTCCAAAAAATGCAAAGAAAAATTTGAGAATGTTTACAAATATCACAAGAGAACCAAAGAAGGAAGAGGTGGTAAATCAGATGGTAAAACTTATAGATTCTTTGATCAATTACAAGCCCTTGAAAACAACCCTTCAATGCATCAATCACCTTCAATAACACCACCACCACCACAAACTCAAACACAAACTCCCATTAGTACTATTCCCACCCCTACAACAACAGCTTCATTTCTATCTGCACCTCCATTGTTAAACTCTACACCTCCTACCACCACTGTTCCATCAACTACACTTCCAATTCCAATGTCTTACACACAATCCAACCCTACACATTTTCCACCAATACCATCATCAACAACAACAACAAACCCTACAAATACTAATAACCCTCTTCCTCAAATTACTATTACACCCCCACCATCTTCATTCGCTAATATTTCAGCGGATTTCTTCTCGAATTCAAGTTCGTCTTCGACTTCTTCGGAGGAAACGACAACAATGGAAGGGGGATCGAATCGACGGAAGAGGAAGAGGAAATGGAAGGATTTCTTTGAGAGACTAATGAAGGAGGTTGTTGAGAAACAAGAGGAGTTGCACAAGAGGTTCTTGGAAGCTATAGAGAAAAGAGAAAGAGAGAGAGGTGCTAGAGAAGAAGCTTGGAGGTTGCAAGAGATGCAAAGGATTAATAGAGAAAGGGAAATTCTTGCTCAAGAGAGATCTATTGCTGCTACTAAAGATGCTGCTGTTATGGCTTTTTTGCAGAAGATTGCTGAACAACAAAATCTTGTTCCTCCTGTATTGAACAACAACACCGTCATTCCTCAACAACAACAAGCGCCGCAGGAAACTACACCAACCCCAACACCAACACCGACACCGACACCAGCAGCAGCACCATTGCCAGTACCAGCAGTACCATTGCCAATACCAATACCAGCAATACCTACACCGCAACAAGTTCAAACTCCAACTGTAACAGTGCAACAACAAACAGCACCGGTCATTCCTCAGGCTTCGCCGTTGCCACAACATCAGCAGCAGCAACAACAGGTTCAGGTACAACAGCAGCAAGTGACGAATATGGAAGTTGCGAAAAGTGACAACAATGGTGAGAGTATGATGCATGCAAGTTCATCTAGGTGGCCAAAAACTGAGGTTGAGGCATTGATAAAGCTGAGAACAACTCTTGATATGAAGTACCAAGAAAATGGACCTAAAGGGCCATTATGGGAGGAGATTTCAGGTTTGATGAAGAAAATGGGGTACAATAGGAATGCAAAGAGGTGCAAAGAGAAATGGGAGAACATCAACAAGTATTTCAAGAAAGTGAAGGAAAGCAACAAGAAGAGGCCAGAAGATTCAAAGACATGTCCTTACTTTCACCAACTTGATGCTCTATACAGGCAGAAGAACAAGGTGGAGGGTGCAGCTGCTGCGTCGAGGCCTGAGGGAACGATGATGGCACCGTTGATGGTTCAGCCGGAGCAGCAATGGCCTCCACAACAACAGGCGCCACCAGCAGCCAGGGCGGATGTGACCATGGAGGATGCTGAGAATGCTGAGAATGATCGGCCGCGTCGAGATGAGGAAGAATATTATGACGATGATGACGGTGATGATGACGAGGACGAAGATGAAGGTAGTGACAATTATGAAGTGGTTGCCAACAAACCACCACCACCTCAATAA
Protein sequence

>MS.gene03321.t1

MLGDSTVLGTGGGSSGDGAGAYHDGGGGSISGDDERGGGSSRNEEGVDRSFGGNRWPRQETVALLKIRSDMDVAFKDASVKGPLWDEVSRKMADLGYQRNSKKCKEKFENVYKYHKRTKEGRGGKSDGKTYRFFDQLQALENNPSMHQSPSITPPPPQTQTQTPISTIPTPTTTASFLSAPPLLNSTPPTTTVPSTTLPIPMSYTQSNPTHFPPIPSSTTTTNPTNTNNPLPQITITPPPSSFANISADFFSNSSSSSTSSEETTTMEGGSNRRKRKRKWKDFFERLMKEVVEKQEELHKRFLEAIEKRERERGAREEAWRLQEMQRINREREILAQERSIAATKDAAVMAFLQKIAEQQNLVPPVLNNNTVIPQQQQAPQETTPTPTPTPTPTPAAAPLPVPAVPLPIPIPAIPTPQQVQTPTVTVQQQTAPVIPQASPLPQHQQQQQQVQVQQQQVTNMEVAKSDNNGESMMHASSSRWPKTEVEALIKLRTTLDMKYQENGPKGPLWEEISGLMKKMGYNRNAKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLDALYRQKNKVEGAAAASRPEGTMMAPLMVQPEQQWPPQQQAPPAARADVTMEDAENAENDRPRRDEEEYYDDDDGDDDEDEDEGSDNYEVVANKPPPPQ