AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene033248

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene033248.t1 MTR_4g105660 92.202 436 28 2 18 453 1 430 0.0 815
MS.gene033248.t1 MTR_3g077650 54.897 439 173 13 16 445 4 426 1.00e-148 431
MS.gene033248.t1 MTR_5g049190 51.254 279 91 6 166 443 2 236 1.31e-85 262
MS.gene033248.t1 MTR_5g070020 62.411 141 44 2 189 320 111 251 3.25e-56 190
MS.gene033248.t1 MTR_4g088015 68.254 126 40 0 197 322 220 345 7.65e-56 191
MS.gene033248.t1 MTR_3g463400 67.176 131 36 2 197 321 132 261 7.84e-56 192
MS.gene033248.t1 MTR_7g451170 69.672 122 37 0 197 318 190 311 4.28e-55 189
MS.gene033248.t1 MTR_7g037260 67.213 122 40 0 197 318 144 265 6.87e-55 187
MS.gene033248.t1 MTR_7g037130 62.295 122 46 0 197 318 144 265 2.93e-49 172
MS.gene033248.t1 MTR_7g035350 56.818 132 56 1 196 326 223 354 1.19e-45 164
MS.gene033248.t1 MTR_7g450950 51.634 153 62 3 175 325 144 286 5.28e-45 160
MS.gene033248.t1 MTR_1g057980 57.600 125 52 1 198 321 80 204 4.91e-43 154
MS.gene033248.t1 MTR_7g061330 61.062 113 44 0 197 309 112 224 7.44e-40 150
MS.gene033248.t1 MTR_7g461410 61.062 113 44 0 197 309 112 224 7.44e-40 150
MS.gene033248.t1 MTR_7g061330 61.062 113 44 0 197 309 76 188 1.06e-39 150
MS.gene033248.t1 MTR_1g026870 61.765 102 39 0 197 298 84 185 5.72e-38 147
MS.gene033248.t1 MTR_3g110028 59.804 102 41 0 197 298 84 185 2.46e-37 145
MS.gene033248.t1 MTR_4g019370 58.824 102 42 0 197 298 37 138 8.73e-36 135
MS.gene033248.t1 MTR_5g016510 53.846 104 48 0 197 300 4 107 4.94e-34 130
MS.gene033248.t1 MTR_5g010650 59.375 96 39 0 197 292 109 204 5.37e-34 133
MS.gene033248.t1 MTR_3g101290 51.961 102 49 0 197 298 36 137 1.41e-33 126
MS.gene033248.t1 MTR_4g094982 51.923 104 50 0 197 300 4 107 3.34e-33 126
MS.gene033248.t1 MTR_5g082910 53.061 98 46 0 197 294 18 115 4.42e-30 118
MS.gene033248.t1 MTR_6g015455 50.000 104 52 0 197 300 4 107 6.37e-30 124
MS.gene033248.t1 MTR_8g027345 49.091 110 53 2 198 304 14 123 3.83e-28 113
MS.gene033248.t1 MTR_4g082040 43.307 127 70 1 195 321 102 226 5.81e-28 115
MS.gene033248.t1 MTR_5g041570 41.844 141 76 3 197 337 133 267 1.13e-27 114
MS.gene033248.t1 MTR_6g027340 45.794 107 58 0 192 298 10 116 1.84e-27 109
MS.gene033248.t1 MTR_5g029840 47.619 105 54 1 198 301 14 118 2.38e-27 112
MS.gene033248.t1 MTR_4g478180 51.456 103 47 2 198 298 15 116 3.32e-27 112
MS.gene033248.t1 MTR_3g052450 49.515 103 50 2 198 298 42 144 7.79e-27 113
MS.gene033248.t1 MTR_1g110460 28.720 289 157 8 180 419 9 297 8.57e-27 110
MS.gene033248.t1 MTR_3g089045 32.364 275 154 9 198 445 16 285 9.63e-27 109
MS.gene033248.t1 MTR_6g027360 48.515 101 52 0 198 298 78 178 9.88e-27 109
MS.gene033248.t1 MTR_4g100720 49.485 97 48 1 198 293 15 111 1.34e-26 105
MS.gene033248.t1 MTR_3g052430 50.962 104 47 3 198 298 43 145 2.25e-26 112
MS.gene033248.t1 MTR_2g011660 48.039 102 52 1 198 298 15 116 3.17e-26 109
MS.gene033248.t1 MTR_6g009430 46.364 110 58 1 193 301 9 118 3.40e-26 108
MS.gene033248.t1 MTR_4g073420 48.673 113 55 2 192 302 8 119 4.53e-26 107
MS.gene033248.t1 MTR_5g007370 47.573 103 51 2 198 298 14 115 4.57e-26 107
MS.gene033248.t1 MTR_3g461490 46.154 104 55 1 198 300 14 117 5.97e-26 108
MS.gene033248.t1 MTR_8g095390 47.222 108 55 2 196 301 12 119 6.68e-26 107
MS.gene033248.t1 MTR_6g074860 41.985 131 74 1 195 325 1 129 7.17e-26 105
MS.gene033248.t1 MTR_3g011610 49.533 107 50 3 194 297 35 140 7.97e-26 110
MS.gene033248.t1 MTR_8g042410 41.860 129 70 3 189 315 30 155 1.09e-25 110
MS.gene033248.t1 MTR_4g091490 46.087 115 59 2 186 298 3 116 1.09e-25 107
MS.gene033248.t1 MTR_7g117730 49.485 97 48 1 198 293 14 110 1.11e-25 105
MS.gene033248.t1 MTR_4g125520 37.423 163 89 5 198 355 14 168 1.15e-25 106
MS.gene033248.t1 MTR_3g097450 49.541 109 51 3 196 301 12 119 1.18e-25 106
MS.gene033248.t1 MTR_2g089620 48.039 102 52 1 198 298 14 115 1.22e-25 107
MS.gene033248.t1 MTR_0008s0390 43.478 115 62 2 186 298 3 116 1.47e-25 105
MS.gene033248.t1 MTR_3g077110 42.017 119 65 3 186 302 3 119 2.07e-25 107
MS.gene033248.t1 MTR_1g112760 43.925 107 57 2 198 302 15 120 2.55e-25 103
MS.gene033248.t1 MTR_5g079670 47.170 106 53 2 198 301 13 117 2.60e-25 103
MS.gene033248.t1 MTR_7g076740 50.000 98 47 1 198 293 14 111 4.00e-25 105
MS.gene033248.t1 MTR_8g020490 50.467 107 50 3 198 302 10 115 4.62e-25 103
MS.gene033248.t1 MTR_8g031360 51.020 98 46 1 198 293 15 112 7.67e-25 104
MS.gene033248.t1 MTR_4g102380 46.226 106 54 2 198 301 14 118 8.71e-25 103
MS.gene033248.t1 MTR_2g064160 46.602 103 52 2 198 298 13 114 9.12e-25 104
MS.gene033248.t1 MTR_0063s0090 33.816 207 120 8 198 392 14 215 9.78e-25 102
MS.gene033248.t1 MTR_0008s0470 39.200 125 73 2 198 320 15 138 1.16e-24 103
MS.gene033248.t1 MTR_5g088640 45.283 106 56 2 194 297 10 115 1.22e-24 103
MS.gene033248.t1 MTR_1g045610 51.042 96 44 2 198 291 23 117 1.25e-24 102
MS.gene033248.t1 MTR_5g010020 48.454 97 49 1 198 293 14 110 1.50e-24 104
MS.gene033248.t1 MTR_5g088080 45.283 106 56 2 194 297 10 115 1.51e-24 102
MS.gene033248.t1 MTR_5g088150 45.283 106 56 2 194 297 10 115 1.51e-24 102
MS.gene033248.t1 MTR_5g488210 45.283 106 56 2 194 297 10 115 1.51e-24 102
MS.gene033248.t1 MTR_0251s0050 42.609 115 63 2 186 298 3 116 1.53e-24 102
MS.gene033248.t1 MTR_2g034790 29.680 219 130 6 198 411 14 213 2.01e-24 103
MS.gene033248.t1 MTR_8g098860 44.762 105 57 1 198 301 14 118 2.13e-24 103
MS.gene033248.t1 MTR_5g062790 40.945 127 71 3 196 320 9 133 2.23e-24 103
MS.gene033248.t1 MTR_5g078140 46.226 106 54 2 198 301 14 118 2.28e-24 103
MS.gene033248.t1 MTR_3g074520 47.573 103 51 2 198 298 14 115 2.38e-24 103
MS.gene033248.t1 MTR_2g089420 34.211 190 102 6 198 383 13 183 2.46e-24 105
MS.gene033248.t1 MTR_7g011170 45.714 105 56 1 198 301 14 118 2.62e-24 103
MS.gene033248.t1 MTR_1g073170 50.000 96 45 2 198 291 22 116 2.75e-24 101
MS.gene033248.t1 MTR_5g088610 43.103 116 62 3 196 309 9 122 3.23e-24 103
MS.gene033248.t1 MTR_2g097910 44.118 102 56 1 198 298 22 123 3.80e-24 102
MS.gene033248.t1 MTR_5g488170 45.283 106 56 2 194 297 10 115 4.14e-24 100
MS.gene033248.t1 MTR_2g089450 43.590 117 61 3 198 312 14 127 5.29e-24 100
MS.gene033248.t1 MTR_4g121460 44.118 102 56 1 198 298 14 115 5.45e-24 102
MS.gene033248.t1 MTR_1g043080 46.296 108 54 3 186 291 3 108 5.47e-24 100
MS.gene033248.t1 MTR_6g027370 42.308 104 60 0 195 298 96 199 5.63e-24 102
MS.gene033248.t1 MTR_8g017440 40.351 114 65 2 198 309 14 126 6.95e-24 102
MS.gene033248.t1 MTR_4g105130 41.509 106 61 1 198 302 14 119 7.51e-24 102
MS.gene033248.t1 MTR_3g065440 45.283 106 55 2 198 301 14 118 7.78e-24 101
MS.gene033248.t1 MTR_1g076150 41.964 112 62 2 198 307 14 124 8.63e-24 100
MS.gene033248.t1 MTR_1g085040 44.660 103 54 2 198 298 14 115 8.83e-24 102
MS.gene033248.t1 MTR_1g100653 44.737 114 59 3 198 309 14 125 1.07e-23 100
MS.gene033248.t1 MTR_8g017540 41.322 121 65 3 198 316 60 176 1.32e-23 102
MS.gene033248.t1 MTR_8g006470 48.039 102 51 2 198 297 12 113 1.39e-23 100
MS.gene033248.t1 MTR_7g086960 33.523 176 111 3 187 357 78 252 1.39e-23 102
MS.gene033248.t1 MTR_1g021230 46.602 103 52 2 198 298 59 160 1.78e-23 102
MS.gene033248.t1 MTR_1g043050 44.860 107 57 2 186 291 3 108 1.93e-23 99.4
MS.gene033248.t1 MTR_2g099740 44.660 103 54 2 198 298 14 115 2.13e-23 102
MS.gene033248.t1 MTR_4g063100 44.340 106 56 2 195 298 6 110 2.64e-23 99.0
MS.gene033248.t1 MTR_4g485530 43.396 106 59 1 198 302 14 119 2.88e-23 97.1
MS.gene033248.t1 MTR_5g042030 47.059 102 53 1 198 298 9 110 3.00e-23 99.8
MS.gene033248.t1 MTR_7g035075 47.368 95 49 1 198 291 16 110 3.51e-23 97.4
MS.gene033248.t1 MTR_2g095520 47.959 98 49 2 198 293 14 111 3.61e-23 100
MS.gene033248.t1 MTR_3g028740 45.098 102 55 1 198 298 24 125 4.31e-23 100
MS.gene033248.t1 MTR_7g111290 47.423 97 48 2 198 292 14 109 4.73e-23 100
MS.gene033248.t1 MTR_4g065017 44.118 102 56 1 198 298 19 120 5.30e-23 99.8
MS.gene033248.t1 MTR_1g085640 39.623 106 63 1 198 302 14 119 7.93e-23 100
MS.gene033248.t1 MTR_7g110830 40.566 106 62 1 198 302 14 119 9.01e-23 99.8
MS.gene033248.t1 MTR_2g088170 51.376 109 49 3 193 298 26 133 9.36e-23 100
MS.gene033248.t1 MTR_4g057635 43.519 108 59 2 193 298 9 116 1.18e-22 98.6
MS.gene033248.t1 MTR_5g079290 41.121 107 62 1 198 303 19 125 1.32e-22 97.1
MS.gene033248.t1 MTR_1g017140 39.062 128 69 3 198 316 14 141 1.99e-22 98.2
MS.gene033248.t1 MTR_4g029540 45.098 102 54 2 198 297 12 113 2.30e-22 97.4
MS.gene033248.t1 MTR_7g096930 47.368 95 49 1 198 291 14 108 2.43e-22 96.7
MS.gene033248.t1 MTR_6g090405 41.284 109 62 2 193 299 9 117 2.57e-22 96.3
MS.gene033248.t1 MTR_1g017000 40.777 103 59 2 198 298 14 116 2.65e-22 96.3
MS.gene033248.t1 MTR_6g006030 47.917 96 47 2 198 291 16 110 3.49e-22 94.7
MS.gene033248.t1 MTR_0140s0030 43.810 105 58 1 198 301 15 119 3.67e-22 97.4
MS.gene033248.t1 MTR_0489s0020 43.810 105 58 1 198 301 15 119 3.67e-22 97.4
MS.gene033248.t1 MTR_3g083540 42.268 97 55 1 198 293 43 139 4.03e-22 96.7
MS.gene033248.t1 MTR_7g010210 42.857 105 59 1 198 301 14 118 4.35e-22 97.1
MS.gene033248.t1 MTR_7g115650 40.952 105 61 1 198 301 14 118 4.35e-22 94.4
MS.gene033248.t1 MTR_5g014990 44.660 103 55 2 198 298 14 116 4.39e-22 96.7
MS.gene033248.t1 MTR_3g103570 44.660 103 55 2 198 298 14 116 4.42e-22 97.4
MS.gene033248.t1 MTR_8g017500 42.718 103 56 2 198 298 14 115 4.61e-22 97.4
MS.gene033248.t1 MTR_8g017340 45.192 104 53 3 198 298 14 116 5.60e-22 98.6
MS.gene033248.t1 MTR_6g055910 28.467 274 168 7 198 452 16 280 5.62e-22 95.9
MS.gene033248.t1 MTR_4g082290 42.857 105 59 1 198 301 14 118 6.94e-22 97.8
MS.gene033248.t1 MTR_4g097570 44.898 98 51 2 198 292 14 111 7.91e-22 95.5
MS.gene033248.t1 MTR_1g062940 38.571 140 69 4 198 335 8 132 8.33e-22 94.0
MS.gene033248.t1 MTR_7g010210 42.857 105 59 1 198 301 14 118 8.46e-22 95.1
MS.gene033248.t1 MTR_0197s0010 47.368 95 47 2 201 293 6 99 1.03e-21 94.0
MS.gene033248.t1 MTR_4g082230 43.396 106 57 2 198 301 14 118 1.16e-21 97.1
MS.gene033248.t1 MTR_5g079220 38.333 120 72 2 185 302 9 128 1.39e-21 94.7
MS.gene033248.t1 MTR_0001s0360 40.187 107 63 1 198 303 9 115 1.45e-21 94.0
MS.gene033248.t1 MTR_1g086530 38.931 131 75 3 195 321 32 161 1.60e-21 94.4
MS.gene033248.t1 MTR_6g012180 45.361 97 52 1 198 293 14 110 1.85e-21 95.1
MS.gene033248.t1 MTR_6g012690 42.857 105 59 1 198 301 14 118 1.98e-21 95.5
MS.gene033248.t1 MTR_8g017350 44.231 104 54 3 198 298 14 116 2.25e-21 97.4
MS.gene033248.t1 MTR_8g017390 42.308 104 56 3 198 298 14 116 2.45e-21 96.7
MS.gene033248.t1 MTR_5g078910 41.176 102 59 1 198 298 9 110 2.57e-21 94.4
MS.gene033248.t1 MTR_1g008970 60.811 74 28 1 221 293 113 186 3.04e-21 93.2
MS.gene033248.t1 MTR_4g128670 46.939 98 50 2 198 293 14 111 3.10e-21 95.1
MS.gene033248.t1 MTR_3g039990 42.857 105 59 1 198 301 15 119 3.35e-21 94.4
MS.gene033248.t1 MTR_7g102110 42.718 103 57 2 198 298 14 116 3.55e-21 93.2
MS.gene033248.t1 MTR_7g017260 32.512 203 100 7 194 377 22 206 3.60e-21 93.6
MS.gene033248.t1 MTR_0008s0280 42.157 102 58 1 193 293 9 110 4.08e-21 92.0
MS.gene033248.t1 MTR_1g083630 43.137 102 57 1 198 298 14 115 5.80e-21 96.3
MS.gene033248.t1 MTR_5g078860 36.478 159 96 4 198 354 9 164 5.92e-21 93.6
MS.gene033248.t1 MTR_5g038910 43.564 101 55 1 201 299 29 129 6.55e-21 95.5
MS.gene033248.t1 MTR_1g100667 40.952 105 61 1 198 301 15 119 6.74e-21 92.4
MS.gene033248.t1 MTR_5g078800 35.256 156 97 3 198 351 9 162 6.94e-21 92.4
MS.gene033248.t1 MTR_4g097570 44.330 97 52 2 198 292 14 110 7.74e-21 92.8
MS.gene033248.t1 MTR_1g086510 36.913 149 89 4 184 328 8 155 8.27e-21 92.0
MS.gene033248.t1 MTR_0247s0040 42.000 100 57 1 198 296 9 108 8.43e-21 89.7
MS.gene033248.t1 MTR_5g038910 43.564 101 55 1 201 299 29 129 9.64e-21 94.0
MS.gene033248.t1 MTR_5g078950 40.000 100 59 1 198 296 9 108 1.16e-20 91.7
MS.gene033248.t1 MTR_5g079120 40.870 115 65 2 186 298 51 164 1.17e-20 92.4
MS.gene033248.t1 MTR_8g468380 40.816 98 58 0 201 298 25 122 2.32e-20 93.6
MS.gene033248.t1 MTR_2g096380 42.718 103 56 2 198 298 8 109 2.56e-20 90.1
MS.gene033248.t1 MTR_7g087130 41.905 105 60 1 198 301 14 118 2.66e-20 92.0
MS.gene033248.t1 MTR_2g033170 39.815 108 64 1 198 304 26 133 1.75e-19 89.4
MS.gene033248.t1 MTR_5g078930 42.574 101 55 2 195 293 8 107 2.56e-19 86.7
MS.gene033248.t1 MTR_8g060940 41.053 95 55 1 198 291 9 103 3.21e-19 87.0
MS.gene033248.t1 MTR_2g067420 42.157 102 58 1 193 293 11 112 3.57e-19 88.6
MS.gene033248.t1 MTR_0193s0090 39.604 101 60 1 198 297 9 109 4.60e-19 85.9
MS.gene033248.t1 MTR_7g109320 37.423 163 99 3 198 357 14 176 8.26e-19 87.8
MS.gene033248.t1 MTR_4g123040 44.211 95 52 1 198 291 26 120 1.50e-18 86.7
MS.gene033248.t1 MTR_1g085880 37.903 124 71 4 201 322 17 136 4.19e-18 82.8
MS.gene033248.t1 MTR_4g128190 41.584 101 46 3 198 297 13 101 4.66e-18 83.6
MS.gene033248.t1 MTR_3g045430 32.479 117 78 1 186 301 3 119 6.65e-18 84.3
MS.gene033248.t1 MTR_7g061550 40.196 102 58 1 200 298 9 110 9.72e-18 84.7
MS.gene033248.t1 MTR_1g085770 37.903 124 71 4 201 322 17 136 1.84e-17 83.2
MS.gene033248.t1 MTR_7g111290 51.613 62 30 0 231 292 6 67 3.51e-17 82.8
MS.gene033248.t1 MTR_4g063100 44.156 77 42 1 222 298 6 81 5.96e-17 80.1
MS.gene033248.t1 MTR_7g035300 38.835 103 51 3 200 302 78 168 3.64e-16 78.2
MS.gene033248.t1 MTR_6g055910 27.083 240 148 6 231 452 21 251 4.60e-16 78.2
MS.gene033248.t1 MTR_2g096380 42.647 68 39 0 231 298 23 90 4.81e-15 74.3
MS.gene033248.t1 MTR_6g080360 42.553 94 53 1 198 291 530 622 5.65e-14 74.7
MS.gene033248.t1 MTR_6g080360 35.789 95 60 1 197 291 478 571 2.90e-11 66.2
MS.gene033248.t1 MTR_6g080360 42.553 94 53 1 198 291 310 402 1.02e-13 73.9
MS.gene033248.t1 MTR_6g080360 35.789 95 60 1 197 291 258 351 6.00e-11 65.1
MS.gene033248.t1 MTR_5g007300 41.333 75 43 1 198 271 66 140 1.09e-13 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene033248.t1 AT4G18770 53.091 275 106 8 144 405 157 421 1.24e-86 271
MS.gene033248.t1 AT3G27785 63.946 147 49 1 185 327 176 322 1.53e-58 199
MS.gene033248.t1 AT5G58850 62.319 138 39 2 197 321 104 241 7.07e-53 183
MS.gene033248.t1 AT5G40360 60.145 138 53 1 191 326 151 288 3.70e-52 179
MS.gene033248.t1 AT5G11050 58.784 148 41 3 197 326 104 249 3.15e-51 179
MS.gene033248.t1 AT3G09370 49.359 156 69 2 197 352 134 279 1.28e-41 155
MS.gene033248.t1 AT3G09370 49.359 156 69 2 197 352 129 274 1.54e-41 154
MS.gene033248.t1 AT3G09370 49.359 156 69 2 197 352 142 287 1.61e-41 155
MS.gene033248.t1 AT5G02320 62.745 102 38 0 197 298 126 227 6.24e-39 148
MS.gene033248.t1 AT5G02320 62.745 102 38 0 197 298 126 227 6.24e-39 148
MS.gene033248.t1 AT5G02320 62.745 102 38 0 197 298 66 167 7.60e-39 147
MS.gene033248.t1 AT5G11510 40.526 190 99 2 197 372 80 269 8.08e-39 150
MS.gene033248.t1 AT5G11510 40.984 183 94 2 197 365 80 262 1.04e-38 149
MS.gene033248.t1 AT5G11510 40.984 183 94 2 197 365 80 262 1.16e-38 149
MS.gene033248.t1 AT5G11510 40.984 183 94 2 197 365 80 262 1.16e-38 149
MS.gene033248.t1 AT5G11510 40.984 183 94 2 197 365 80 262 1.16e-38 149
MS.gene033248.t1 AT2G25230 48.120 133 69 0 192 324 20 152 6.93e-37 135
MS.gene033248.t1 AT4G32730 55.462 119 48 1 197 315 86 199 7.73e-37 144
MS.gene033248.t1 AT4G32730 55.462 119 48 1 197 315 86 199 7.73e-37 144
MS.gene033248.t1 AT4G32730 55.462 119 48 1 197 315 86 199 7.73e-37 144
MS.gene033248.t1 AT4G32730 55.462 119 48 1 197 315 86 199 7.73e-37 144
MS.gene033248.t1 AT4G32730 55.462 119 48 1 197 315 86 199 1.04e-36 144
MS.gene033248.t1 AT3G55730 47.482 139 71 1 197 333 55 193 2.44e-36 138
MS.gene033248.t1 AT4G00540 60.577 104 38 1 198 298 103 206 4.98e-34 132
MS.gene033248.t1 AT5G40430 44.604 139 76 1 192 330 48 185 5.72e-34 128
MS.gene033248.t1 AT4G00540 60.577 104 38 1 198 298 101 204 1.52e-33 131
MS.gene033248.t1 AT3G09230 55.340 103 46 0 197 299 54 156 7.05e-33 129
MS.gene033248.t1 AT2G23290 51.351 111 54 0 190 300 5 115 1.63e-32 125
MS.gene033248.t1 AT4G37260 51.923 104 50 0 197 300 12 115 2.43e-32 125
MS.gene033248.t1 AT3G50060 50.962 104 51 0 197 300 5 108 2.02e-31 122
MS.gene033248.t1 AT5G67300 48.039 102 53 0 197 298 5 106 5.03e-29 116
MS.gene033248.t1 AT2G39880 50.000 102 51 0 197 298 49 150 8.48e-29 117
MS.gene033248.t1 AT4G26930 46.667 105 55 1 194 297 17 121 5.57e-28 115
MS.gene033248.t1 AT2G32460 50.435 115 50 4 198 309 8 118 7.87e-28 115
MS.gene033248.t1 AT2G32460 50.435 115 50 4 198 309 20 130 8.02e-28 115
MS.gene033248.t1 AT3G29020 47.706 109 54 1 195 300 62 170 1.42e-27 110
MS.gene033248.t1 AT2G26950 47.863 117 51 3 190 301 11 122 1.48e-27 113
MS.gene033248.t1 AT3G11440 45.872 109 57 2 192 298 37 145 3.55e-27 114
MS.gene033248.t1 AT1G69560 42.149 121 70 0 183 303 108 228 3.60e-27 112
MS.gene033248.t1 AT1G69560 42.149 121 70 0 183 303 92 212 4.08e-27 111
MS.gene033248.t1 AT5G55020 48.571 105 51 2 195 297 25 128 4.31e-27 114
MS.gene033248.t1 AT5G14750 41.525 118 68 1 198 314 18 135 4.78e-27 108
MS.gene033248.t1 AT3G29020 47.706 109 54 1 195 300 64 172 4.94e-27 110
MS.gene033248.t1 AT1G22640 48.113 106 54 1 198 302 14 119 7.90e-27 108
MS.gene033248.t1 AT4G33450 48.598 107 55 0 192 298 13 119 8.28e-27 108
MS.gene033248.t1 AT3G11440 45.872 109 57 2 192 298 37 145 9.74e-27 113
MS.gene033248.t1 AT3G11440 45.872 109 57 2 192 298 37 145 9.74e-27 113
MS.gene033248.t1 AT3G11440 45.872 109 57 2 192 298 37 145 9.74e-27 113
MS.gene033248.t1 AT4G38620 48.673 113 55 2 192 302 8 119 1.22e-26 108
MS.gene033248.t1 AT1G26780 45.000 120 64 1 195 314 95 212 1.28e-26 108
MS.gene033248.t1 AT1G26780 45.000 120 64 1 195 314 95 212 1.76e-26 110
MS.gene033248.t1 AT1G17950 44.444 117 63 1 195 311 2 116 2.38e-26 107
MS.gene033248.t1 AT5G40330 48.454 97 49 1 198 293 14 110 2.56e-26 106
MS.gene033248.t1 AT4G28110 49.091 110 51 2 198 306 14 119 2.78e-26 108
MS.gene033248.t1 AT3G28470 48.454 97 49 1 198 293 14 110 3.43e-26 108
MS.gene033248.t1 AT4G09460 49.541 109 52 2 192 298 8 115 3.44e-26 106
MS.gene033248.t1 AT1G74430 44.340 106 58 1 198 302 14 119 5.27e-26 107
MS.gene033248.t1 AT4G05100 45.299 117 63 1 186 301 3 119 8.25e-26 107
MS.gene033248.t1 AT4G21440 48.039 102 52 1 198 298 14 115 8.31e-26 108
MS.gene033248.t1 AT1G66230 47.170 106 53 2 198 301 14 118 1.25e-25 106
MS.gene033248.t1 AT1G35515 36.875 160 90 4 198 352 14 167 1.52e-25 103
MS.gene033248.t1 AT3G27920 47.423 97 50 1 198 293 16 112 1.53e-25 104
MS.gene033248.t1 AT2G26960 49.533 107 52 2 192 297 17 122 1.70e-25 108
MS.gene033248.t1 AT5G35550 42.373 118 67 1 185 301 3 120 1.89e-25 105
MS.gene033248.t1 AT1G57560 44.860 107 56 2 198 302 14 119 2.26e-25 106
MS.gene033248.t1 AT1G57560 44.860 107 56 2 198 302 14 119 2.53e-25 105
MS.gene033248.t1 AT1G73410 46.903 113 56 1 198 310 6 114 3.04e-25 104
MS.gene033248.t1 AT4G22680 47.170 106 53 2 198 301 14 118 4.09e-25 104
MS.gene033248.t1 AT4G12350 45.045 111 58 2 193 301 9 118 4.12e-25 104
MS.gene033248.t1 AT3G61250 50.000 106 49 3 198 300 14 118 5.96e-25 104
MS.gene033248.t1 AT1G73410 49.533 107 51 1 198 301 6 112 6.69e-25 102
MS.gene033248.t1 AT3G24310 48.148 108 49 3 198 303 20 122 1.25e-24 103
MS.gene033248.t1 AT3G12720 46.154 104 53 2 198 299 24 126 1.30e-24 103
MS.gene033248.t1 AT5G26660 43.925 107 57 2 198 302 14 119 1.45e-24 104
MS.gene033248.t1 AT5G16770 47.059 102 53 1 198 298 14 115 1.83e-24 103
MS.gene033248.t1 AT5G16770 47.059 102 53 1 198 298 14 115 1.83e-24 103
MS.gene033248.t1 AT3G30210 51.042 96 44 2 198 291 29 123 1.91e-24 102
MS.gene033248.t1 AT5G12870 43.925 107 59 1 198 303 20 126 1.92e-24 102
MS.gene033248.t1 AT4G34990 46.296 108 57 1 196 302 12 119 1.95e-24 102
MS.gene033248.t1 AT5G06100 45.631 103 54 2 198 298 34 136 2.01e-24 105
MS.gene033248.t1 AT2G16720 48.113 106 53 2 198 301 14 119 2.47e-24 102
MS.gene033248.t1 AT5G16770 47.059 102 53 1 198 298 14 115 2.66e-24 103
MS.gene033248.t1 AT5G16770 47.059 102 53 1 198 298 14 115 2.66e-24 103
MS.gene033248.t1 AT1G63910 44.762 105 57 1 198 301 14 118 3.16e-24 103
MS.gene033248.t1 AT5G07690 49.485 97 48 1 198 293 14 110 3.20e-24 103
MS.gene033248.t1 AT5G54230 39.583 144 77 3 198 331 14 157 3.38e-24 102
MS.gene033248.t1 AT4G13480 43.333 120 65 2 198 315 8 126 3.69e-24 101
MS.gene033248.t1 AT3G13540 37.288 118 73 1 182 298 9 126 4.20e-24 101
MS.gene033248.t1 AT4G37780 33.333 201 116 5 193 381 9 203 5.04e-24 102
MS.gene033248.t1 AT5G17800 42.017 119 69 0 195 313 90 208 5.42e-24 102
MS.gene033248.t1 AT5G56110 39.259 135 75 3 198 329 14 144 5.42e-24 102
MS.gene033248.t1 AT5G06100 45.631 103 54 2 198 298 34 136 5.71e-24 104
MS.gene033248.t1 AT5G06100 45.631 103 54 2 198 298 34 136 5.71e-24 104
MS.gene033248.t1 AT5G06100 45.631 103 54 2 198 298 34 136 5.71e-24 104
MS.gene033248.t1 AT5G06100 45.631 103 54 2 198 298 34 136 5.71e-24 104
MS.gene033248.t1 AT3G01530 48.039 102 50 2 198 297 27 127 5.95e-24 99.8
MS.gene033248.t1 AT3G02940 47.059 102 53 1 198 298 14 115 6.16e-24 102
MS.gene033248.t1 AT1G18570 45.283 106 57 1 198 302 15 120 6.37e-24 102
MS.gene033248.t1 AT2G47190 44.444 108 59 1 198 304 22 129 7.35e-24 100
MS.gene033248.t1 AT5G61420 48.454 97 49 1 198 293 14 110 7.63e-24 102
MS.gene033248.t1 AT1G09540 35.669 157 79 3 198 352 14 150 8.32e-24 102
MS.gene033248.t1 AT3G02940 47.059 102 53 1 198 298 14 115 8.37e-24 102
MS.gene033248.t1 AT3G02940 47.059 102 53 1 198 298 14 115 8.37e-24 102
MS.gene033248.t1 AT5G10280 45.631 103 53 2 198 298 14 115 9.38e-24 102
MS.gene033248.t1 AT1G68320 43.689 103 55 2 198 298 21 122 1.18e-23 100
MS.gene033248.t1 AT3G60460 45.614 114 59 3 186 297 2 114 1.25e-23 100
MS.gene033248.t1 AT3G48920 44.068 118 63 2 181 297 5 120 2.01e-23 99.4
MS.gene033248.t1 AT3G27810 44.860 107 57 2 198 303 22 127 2.29e-23 98.6
MS.gene033248.t1 AT5G14340 44.231 104 55 2 198 299 26 128 2.31e-23 99.8
MS.gene033248.t1 AT5G52600 42.453 106 60 1 189 293 5 110 2.34e-23 97.8
MS.gene033248.t1 AT1G66370 40.870 115 59 2 198 307 10 120 2.89e-23 98.6
MS.gene033248.t1 AT5G07700 47.423 97 50 1 198 293 14 110 3.43e-23 100
MS.gene033248.t1 AT5G07700 47.423 97 50 1 198 293 14 110 3.43e-23 100
MS.gene033248.t1 AT5G60890 45.283 106 57 1 198 302 14 119 3.96e-23 99.4
MS.gene033248.t1 AT5G39700 38.636 132 78 1 172 303 33 161 4.35e-23 96.7
MS.gene033248.t1 AT5G65230 46.602 103 52 2 198 298 14 115 4.57e-23 99.8
MS.gene033248.t1 AT4G17785 44.660 103 54 2 198 298 15 116 4.67e-23 100
MS.gene033248.t1 AT4G17785 44.660 103 54 2 198 298 15 116 5.46e-23 100
MS.gene033248.t1 AT3G01140 45.714 105 56 1 198 301 14 118 5.73e-23 100
MS.gene033248.t1 AT3G01140 45.714 105 56 1 198 301 57 161 6.13e-23 100
MS.gene033248.t1 AT1G18710 40.566 106 62 1 198 302 14 119 6.26e-23 98.2
MS.gene033248.t1 AT1G25340 43.137 102 57 1 198 298 20 121 8.83e-23 98.2
MS.gene033248.t1 AT5G16600 44.340 106 56 2 198 301 14 118 1.01e-22 99.0
MS.gene033248.t1 AT5G15310 44.762 105 57 1 198 301 14 118 1.22e-22 98.6
MS.gene033248.t1 AT5G15310 44.762 105 57 1 198 301 14 118 1.26e-22 98.6
MS.gene033248.t1 AT3G13890 41.176 102 59 1 198 298 14 115 1.60e-22 99.0
MS.gene033248.t1 AT3G62610 44.118 102 56 1 198 298 14 115 1.61e-22 98.6
MS.gene033248.t1 AT5G15310 44.762 105 57 1 198 301 14 118 1.70e-22 96.7
MS.gene033248.t1 AT5G59780 43.689 103 55 2 198 298 10 111 2.00e-22 95.9
MS.gene033248.t1 AT5G40350 45.631 103 54 2 198 299 19 120 2.33e-22 95.5
MS.gene033248.t1 AT3G46130 44.660 103 54 2 198 298 11 112 2.49e-22 96.3
MS.gene033248.t1 AT1G25340 42.574 101 54 1 198 298 20 116 2.95e-22 96.7
MS.gene033248.t1 AT4G01680 40.566 106 62 1 198 302 14 119 3.84e-22 97.4
MS.gene033248.t1 AT4G25560 41.905 105 60 1 198 301 12 116 4.71e-22 96.3
MS.gene033248.t1 AT4G01680 40.566 106 62 1 198 302 14 119 5.07e-22 95.1
MS.gene033248.t1 AT5G62320 43.363 113 54 3 198 301 15 126 5.77e-22 95.1
MS.gene033248.t1 AT1G74080 44.340 106 58 1 198 302 14 119 5.90e-22 96.7
MS.gene033248.t1 AT1G06180 46.296 108 53 3 198 301 14 120 6.00e-22 95.1
MS.gene033248.t1 AT3G13890 39.640 111 57 1 198 298 14 124 6.17e-22 97.4
MS.gene033248.t1 AT1G25340 42.574 101 54 1 198 298 20 116 6.22e-22 96.3
MS.gene033248.t1 AT3G08500 43.137 102 57 1 198 298 32 133 7.88e-22 96.7
MS.gene033248.t1 AT2G47460 40.741 108 63 1 192 298 8 115 1.20e-21 96.7
MS.gene033248.t1 AT5G49330 42.157 102 58 1 198 298 14 115 1.28e-21 95.9
MS.gene033248.t1 AT5G62470 41.346 104 61 0 198 301 14 117 1.37e-21 96.3
MS.gene033248.t1 AT3G23250 45.263 95 51 1 198 291 14 108 1.58e-21 94.7
MS.gene033248.t1 AT2G31180 43.396 106 57 2 198 301 14 118 1.76e-21 93.6
MS.gene033248.t1 AT5G57620 42.056 107 60 2 198 302 14 120 2.32e-21 95.1
MS.gene033248.t1 AT1G56160 41.905 105 58 2 198 300 16 119 3.51e-21 94.0
MS.gene033248.t1 AT1G34670 43.137 102 57 1 198 298 14 115 4.02e-21 95.1
MS.gene033248.t1 AT3G53200 42.727 110 60 2 191 298 4 112 4.98e-21 92.0
MS.gene033248.t1 AT1G48000 44.211 95 52 1 198 291 34 128 4.99e-21 92.4
MS.gene033248.t1 AT4G01680 38.136 118 60 2 198 302 14 131 8.83e-21 93.6
MS.gene033248.t1 AT1G79180 38.983 118 71 1 193 309 11 128 9.25e-21 92.8
MS.gene033248.t1 AT5G23000 42.593 108 60 2 193 298 9 116 1.26e-20 92.8
MS.gene033248.t1 AT1G16490 39.286 112 67 1 193 303 11 122 1.37e-20 91.7
MS.gene033248.t1 AT5G65790 39.024 123 72 3 198 318 14 135 1.46e-20 93.6
MS.gene033248.t1 AT3G47600 40.741 108 57 2 198 301 14 118 1.62e-20 92.8
MS.gene033248.t1 AT1G74650 44.118 102 56 1 198 298 14 115 1.89e-20 92.4
MS.gene033248.t1 AT5G62470 40.741 108 57 2 198 301 14 118 4.42e-20 91.7
MS.gene033248.t1 AT1G14350 41.935 93 54 0 201 293 28 120 4.59e-20 92.4
MS.gene033248.t1 AT1G14350 41.935 93 54 0 201 293 28 120 4.59e-20 92.4
MS.gene033248.t1 AT3G49690 42.718 103 57 2 198 298 14 116 6.29e-20 90.5
MS.gene033248.t1 AT3G12820 40.833 120 67 3 185 302 4 121 8.21e-20 88.6
MS.gene033248.t1 AT1G08810 41.905 105 60 1 198 301 14 118 8.57e-20 89.7
MS.gene033248.t1 AT3G28910 40.952 105 61 1 198 301 14 118 9.91e-20 90.1
MS.gene033248.t1 AT5G49620 41.667 108 62 1 198 304 28 135 1.25e-19 89.7
MS.gene033248.t1 AT5G52260 41.509 106 59 2 198 301 14 118 2.31e-19 88.2
MS.gene033248.t1 AT2G02820 42.697 89 51 0 201 289 33 121 4.19e-19 88.6
MS.gene033248.t1 AT5G35550 50.704 71 35 0 231 301 53 123 4.39e-19 87.0
MS.gene033248.t1 AT5G26660 39.785 93 55 1 231 323 17 108 6.25e-19 87.8
MS.gene033248.t1 AT2G02820 40.860 93 55 0 201 293 33 125 6.96e-19 89.4
MS.gene033248.t1 AT2G02820 40.860 93 55 0 201 293 33 125 8.16e-19 89.0
MS.gene033248.t1 AT1G66380 40.351 114 66 2 198 310 10 122 8.45e-19 83.2
MS.gene033248.t1 AT5G14750 39.326 89 52 1 228 314 13 101 2.93e-18 82.4
MS.gene033248.t1 AT1G56650 44.330 97 53 1 198 293 10 106 3.48e-18 84.3
MS.gene033248.t1 AT3G06490 38.532 109 64 2 198 304 21 128 6.82e-18 84.7
MS.gene033248.t1 AT1G66390 43.299 97 54 1 198 293 10 106 1.41e-17 82.4
MS.gene033248.t1 AT2G36890 40.777 103 59 2 198 298 14 116 1.66e-17 83.2
MS.gene033248.t1 AT2G36890 40.777 103 59 2 198 298 55 157 2.68e-17 83.2
MS.gene033248.t1 AT3G27810 49.315 73 36 1 231 303 7 78 3.16e-17 79.7
MS.gene033248.t1 AT3G18100 41.667 96 56 0 196 291 544 639 3.71e-17 84.7
MS.gene033248.t1 AT3G18100 41.667 96 56 0 196 291 496 591 5.96e-17 84.0
MS.gene033248.t1 AT3G18100 41.667 96 56 0 196 291 383 478 7.49e-17 83.6
MS.gene033248.t1 AT3G18100 41.667 96 56 0 196 291 331 426 9.03e-17 83.2
MS.gene033248.t1 AT3G53200 50.000 68 34 0 231 298 12 79 9.05e-17 79.3
MS.gene033248.t1 AT1G79180 44.304 79 44 0 231 309 83 161 1.09e-16 81.3
MS.gene033248.t1 AT3G12820 48.611 72 37 0 231 302 2 73 1.81e-16 77.8
MS.gene033248.t1 AT5G49620 35.115 131 70 2 189 304 19 149 2.00e-16 80.5
MS.gene033248.t1 AT5G40350 50.725 69 33 1 231 299 8 75 2.29e-16 77.0
MS.gene033248.t1 AT5G59780 44.118 68 38 0 231 298 23 90 4.93e-16 77.4
MS.gene033248.t1 AT2G37630 39.216 102 59 1 200 298 6 107 5.74e-16 79.7
MS.gene033248.t1 AT3G46130 44.118 68 38 0 231 298 23 90 9.93e-16 77.0
MS.gene033248.t1 AT1G22640 52.459 61 29 0 242 302 2 62 1.03e-15 75.9
MS.gene033248.t1 AT3G46130 44.118 68 38 0 231 298 13 80 1.05e-15 76.6
MS.gene033248.t1 AT3G47600 42.169 83 46 1 231 311 42 124 6.34e-15 75.9
MS.gene033248.t1 AT1G71030 39.706 68 41 0 234 301 5 72 1.70e-13 69.3
MS.gene033248.t1 AT1G71030 39.706 68 41 0 234 301 19 86 1.95e-13 69.3
MS.gene033248.t1 AT1G66380 41.250 80 46 1 231 310 11 89 4.01e-13 65.9
MS.gene033248.t1 AT5G14750 35.616 73 47 0 242 314 2 74 4.87e-13 66.6
MS.gene033248.t1 AT5G14750 35.616 73 47 0 242 314 2 74 4.87e-13 66.6
MS.gene033248.t1 AT3G23250 52.000 50 24 0 242 291 2 51 5.97e-11 62.8

Find 71 sgRNAs with CRISPR-Local

Find 103 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCTTTCAGCCTTGGTTTC+AGG 0.147851 8.4:+20757698 None:intergenic
CCTTTATGTCAGGCCTTAAA+TGG 0.209585 8.4:+20756895 None:intergenic
AAATCATCAACTTGATATTA+TGG 0.224315 8.4:-20757395 MS.gene033248:CDS
AAAGATGGCATAACCATTTA+AGG 0.233635 8.4:-20756908 MS.gene033248:CDS
TCAAGTTGATGATTTCTTCT+AGG 0.238402 8.4:+20757403 None:intergenic
CACTGTTTCCCTATTCTTCC+AGG 0.238484 8.4:+20756936 None:intergenic
CATATTGAAAATTGTCAATA+AGG 0.267649 8.4:+20757446 None:intergenic
CTTCGAACGACATGTTCTTT+TGG 0.279895 8.4:+20756421 None:intergenic
ATATATCAAGAGCCTGAATT+TGG 0.296321 8.4:-20756372 MS.gene033248:CDS
TTCTATTCAATCCAGCTCTT+TGG 0.315215 8.4:+20757266 None:intergenic
AGTTAAGAAGGAGTTGGATT+TGG 0.339487 8.4:-20756018 MS.gene033248:CDS
TGACAGGAATGAGCACTAAA+TGG 0.346280 8.4:+20757667 None:intergenic
CAGAAGTTACCTGGAAGAAT+AGG 0.346815 8.4:-20756945 MS.gene033248:CDS
TAAGAAGGAGTTGGATTTGG+TGG 0.356545 8.4:-20756015 MS.gene033248:CDS
ATTGCATTCTCAGTTCTTCC+TGG 0.357357 8.4:+20756482 None:intergenic
TGGTGGAACAACATGGAATA+AGG 0.358646 8.4:-20756986 MS.gene033248:CDS
AAATCATTGAACACATAGTT+TGG 0.381641 8.4:+20756209 None:intergenic
TTCCTATCTCTGTATGAGCT+TGG 0.382934 8.4:+20756534 None:intergenic
TTTGGCACTGAGCGGTCATT+AGG 0.385172 8.4:+20756227 None:intergenic
TTCTCTTTGTTGCATTCCAA+TGG 0.390029 8.4:+20756453 None:intergenic
CAAGTTGATGATTTCTTCTA+GGG 0.394455 8.4:+20757404 None:intergenic
TTTAGCTCATCTTTCAGCCT+TGG 0.399678 8.4:+20757691 None:intergenic
CCATTTAAGGCCTGACATAA+AGG 0.414324 8.4:-20756895 MS.gene033248:intron
ACAATCACAACCAATGCATT+TGG 0.420626 8.4:-20757731 MS.gene033248:CDS
TAATCTTGATGAGCATCAAT+TGG 0.428147 8.4:-20756054 MS.gene033248:CDS
ATCCAAGCTCATACAGAGAT+AGG 0.444813 8.4:-20756536 MS.gene033248:CDS
AGAAGTTACCTGGAAGAATA+GGG 0.448161 8.4:-20756944 MS.gene033248:CDS
TATGTCAAGTGTTCCTACTT+TGG 0.449961 8.4:-20756129 MS.gene033248:CDS
GCTCTTTGGTAATAATTTGT+CGG 0.454290 8.4:+20757280 None:intergenic
CATATTGCTCAGAAGTTACC+TGG 0.464115 8.4:-20756954 MS.gene033248:CDS
GGTTGAAGTTAAGAAGGAGT+TGG 0.464742 8.4:-20756024 MS.gene033248:CDS
GGTTTCTGAAGGATTATTGA+AGG 0.465016 8.4:+20757351 None:intergenic
ACAAATTATTACCAAAGAGC+TGG 0.469591 8.4:-20757277 MS.gene033248:CDS
CTCAATGACTTGGTTTCTGA+AGG 0.472621 8.4:+20757340 None:intergenic
GAACGAGGTTGAAGTTAAGA+AGG 0.481507 8.4:-20756030 MS.gene033248:CDS
AATGGACAGTGGAAGAAGAT+AGG 0.483122 8.4:-20757171 MS.gene033248:intron
TCTTGCAGAAGAGTGCCTCT+TGG 0.490737 8.4:+20756395 None:intergenic
TTGTAAGAAATTACCATGAC+AGG 0.514825 8.4:+20757651 None:intergenic
ATGCTTGAAACTTCATCCTC+AGG 0.516133 8.4:+20757307 None:intergenic
CTGGATTGAATAGAAACAAC+GGG 0.519465 8.4:-20757258 MS.gene033248:CDS
TTAAATGCTCTTCTTGTCGT+AGG 0.523576 8.4:+20757226 None:intergenic
TTTAGTGCTCATTCCTGTCA+TGG 0.524413 8.4:-20757664 MS.gene033248:CDS
AAACAGATTGTTGAGTCAAA+TGG 0.530276 8.4:-20757006 MS.gene033248:intron
GATCAGTTTCATCATGTGCA+TGG 0.533505 8.4:-20757613 MS.gene033248:CDS
AAGAAAACAATCACAGTGAA+GGG 0.549607 8.4:-20757196 MS.gene033248:CDS
CAATCACAGTGAAGGGGCAA+TGG 0.549991 8.4:-20757189 MS.gene033248:CDS
TTTGGTGGAGATGATCTCTC+AGG 0.555177 8.4:-20756000 MS.gene033248:CDS
ATACAGAGATAGGAAATAAG+TGG 0.556233 8.4:-20756526 MS.gene033248:CDS
TGATTTGCAATACGTGGCTG+AGG 0.559901 8.4:+20756257 None:intergenic
GAAGAAAACAATCACAGTGA+AGG 0.564017 8.4:-20757197 MS.gene033248:CDS
GGAAACAGTGCAGAGAAAGA+TGG 0.587948 8.4:-20756923 MS.gene033248:CDS
AGACATATGGACAGATGAAG+AGG 0.588670 8.4:-20756570 MS.gene033248:CDS
AGTCAAATGGTGGAACAACA+TGG 0.589895 8.4:-20756993 MS.gene033248:CDS
TACAACATAACTCAATGACT+TGG 0.593106 8.4:+20757330 None:intergenic
CAGATTGTTGAGTCAAATGG+TGG 0.594993 8.4:-20757003 MS.gene033248:CDS
AACAACATGGAATAAGGAAG+TGG 0.595874 8.4:-20756980 MS.gene033248:CDS
ATTGGAATGCAACAAAGAGA+AGG 0.604090 8.4:-20756451 MS.gene033248:CDS
CAAAATTGATTTGCAATACG+TGG 0.610096 8.4:+20756251 None:intergenic
TACAGAGATAGGAAATAAGT+GGG 0.612378 8.4:-20756525 MS.gene033248:CDS
AAGAAAACTACCTGAAACCA+AGG 0.625495 8.4:-20757708 MS.gene033248:CDS
ATGCATTGGTTGTGATTGTG+AGG 0.633671 8.4:+20757735 None:intergenic
AGTGAAGGGGCAATGGACAG+TGG 0.638224 8.4:-20757182 MS.gene033248:CDS
AGAAAACAATCACAGTGAAG+GGG 0.654977 8.4:-20757195 MS.gene033248:CDS
TGCATTGGTTGTGATTGTGA+GGG 0.667078 8.4:+20757736 None:intergenic
GCTGGATTGAATAGAAACAA+CGG 0.670291 8.4:-20757259 MS.gene033248:CDS
ATTGAGTTATGTTGTACCTG+AGG 0.678128 8.4:-20757323 MS.gene033248:CDS
TGGCTGAGGAAGCTGTGCTG+CGG 0.683231 8.4:+20756271 None:intergenic
ACACATAGTTTGGCACTGAG+CGG 0.695454 8.4:+20756219 None:intergenic
TGAGCATCAATTGGAGAACG+AGG 0.696629 8.4:-20756045 MS.gene033248:CDS
AATTTGTTTGAAGAAGAGTG+TGG 0.705506 8.4:-20756173 MS.gene033248:CDS
TGTCGTTCGAAGTATCCAAG+AGG 0.712598 8.4:-20756410 MS.gene033248:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAACAAAAATTCAAATAT+TGG + chr8.4:20756984-20757003 None:intergenic 15.0%
!!! TATAAGGTAATATTTTAACT+TGG - chr8.4:20757015-20757034 MS.gene033248:intron 15.0%
!! AAATCATCAACTTGATATTA+TGG - chr8.4:20756354-20756373 MS.gene033248:CDS 20.0%
!! CATATTGAAAATTGTCAATA+AGG + chr8.4:20756306-20756325 None:intergenic 20.0%
!! GAATTGAAGTTTAATATAGA+AGG + chr8.4:20757143-20757162 None:intergenic 20.0%
!! TATTGAAGGAAAAATAACTA+TGG + chr8.4:20756387-20756406 None:intergenic 20.0%
!! TTTCTCTTAACTTTCATATA+AGG - chr8.4:20756999-20757018 MS.gene033248:CDS 20.0%
!!! AGAGATTTTGATTTTTATGA+TGG - chr8.4:20756235-20756254 MS.gene033248:CDS 20.0%
!!! ATTGACAATTTTCAATATGA+TGG - chr8.4:20756307-20756326 MS.gene033248:CDS 20.0%
!!! TTTCAAGTTTTTGCATATTT+TGG - chr8.4:20756676-20756695 MS.gene033248:intron 20.0%
! AAATCATTGAACACATAGTT+TGG + chr8.4:20757543-20757562 None:intergenic 25.0%
! AGAATGCAATAAAAAACCAT+TGG - chr8.4:20757280-20757299 MS.gene033248:CDS 25.0%
! ATATAGAAGGAAAATTCGTA+TGG + chr8.4:20757130-20757149 None:intergenic 25.0%
! ATTTATTCTATATACGTGTG+TGG + chr8.4:20756894-20756913 None:intergenic 25.0%
!! ACTCAAAACTTTGATCTTTT+TGG - chr8.4:20756193-20756212 MS.gene033248:CDS 25.0%
!! TGTGTTCAATGATTTTTCTT+TGG - chr8.4:20757548-20757567 MS.gene033248:CDS 25.0%
!!! AAAGATCAAAGTTTTGAGTT+TGG + chr8.4:20756192-20756211 None:intergenic 25.0%
!!! AATTCTTTTTCATCCAAAGT+AGG + chr8.4:20757636-20757655 None:intergenic 25.0%
AAAAATGGAACCTTTATGTC+AGG + chr8.4:20756867-20756886 None:intergenic 30.0%
AAACAGATTGTTGAGTCAAA+TGG - chr8.4:20756743-20756762 MS.gene033248:intron 30.0%
AAAGATGGCATAACCATTTA+AGG - chr8.4:20756841-20756860 MS.gene033248:intron 30.0%
AAGAAAACAATCACAGTGAA+GGG - chr8.4:20756553-20756572 MS.gene033248:CDS 30.0%
ACAAATTATTACCAAAGAGC+TGG - chr8.4:20756472-20756491 MS.gene033248:CDS 30.0%
ATACAGAGATAGGAAATAAG+TGG - chr8.4:20757223-20757242 MS.gene033248:CDS 30.0%
ATATATCAAGAGCCTGAATT+TGG - chr8.4:20757377-20757396 MS.gene033248:CDS 30.0%
TAATCTTGATGAGCATCAAT+TGG - chr8.4:20757695-20757714 MS.gene033248:CDS 30.0%
TACAACATAACTCAATGACT+TGG + chr8.4:20756422-20756441 None:intergenic 30.0%
TACAGAGATAGGAAATAAGT+GGG - chr8.4:20757224-20757243 MS.gene033248:CDS 30.0%
TACGTGTGTGGAAAAAAAAA+TGG + chr8.4:20756882-20756901 None:intergenic 30.0%
TTGTAAGAAATTACCATGAC+AGG + chr8.4:20756101-20756120 None:intergenic 30.0%
! AATTTGTTTGAAGAAGAGTG+TGG - chr8.4:20757576-20757595 MS.gene033248:CDS 30.0%
! CATTTTTGCAGAAAGACATA+TGG - chr8.4:20757166-20757185 MS.gene033248:intron 30.0%
! GCTACAAGTAATCTTTTTCT+TGG + chr8.4:20757448-20757467 None:intergenic 30.0%
! GCTCTTTGGTAATAATTTGT+CGG + chr8.4:20756472-20756491 None:intergenic 30.0%
! TAGTTTTCTTCCAAATGCAT+TGG + chr8.4:20756031-20756050 None:intergenic 30.0%
! TCTTTTGCTGAGAATAATAG+TGG - chr8.4:20756262-20756281 MS.gene033248:CDS 30.0%
!! CAAAATTGATTTGCAATACG+TGG + chr8.4:20757501-20757520 None:intergenic 30.0%
!! CAAGTTGATGATTTCTTCTA+GGG + chr8.4:20756348-20756367 None:intergenic 30.0%
!! TCAAGTTGATGATTTCTTCT+AGG + chr8.4:20756349-20756368 None:intergenic 30.0%
!!! GATCTTTTTTGAAAGTCTCT+TGG + chr8.4:20757414-20757433 None:intergenic 30.0%
AACAACATGGAATAAGGAAG+TGG - chr8.4:20756769-20756788 MS.gene033248:intron 35.0%
AAGAAAACTACCTGAAACCA+AGG - chr8.4:20756041-20756060 MS.gene033248:CDS 35.0%
ACAATCACAACCAATGCATT+TGG - chr8.4:20756018-20756037 MS.gene033248:CDS 35.0%
AGAAAACAATCACAGTGAAG+GGG - chr8.4:20756554-20756573 MS.gene033248:CDS 35.0%
AGAAGTTACCTGGAAGAATA+GGG - chr8.4:20756805-20756824 MS.gene033248:intron 35.0%
AGTTAAGAAGGAGTTGGATT+TGG - chr8.4:20757731-20757750 MS.gene033248:CDS 35.0%
ATTGAGTTATGTTGTACCTG+AGG - chr8.4:20756426-20756445 MS.gene033248:CDS 35.0%
ATTGGAATGCAACAAAGAGA+AGG - chr8.4:20757298-20757317 MS.gene033248:CDS 35.0%
CTGGATTGAATAGAAACAAC+GGG - chr8.4:20756491-20756510 MS.gene033248:CDS 35.0%
GAAGAAAACAATCACAGTGA+AGG - chr8.4:20756552-20756571 MS.gene033248:CDS 35.0%
GCTGGATTGAATAGAAACAA+CGG - chr8.4:20756490-20756509 MS.gene033248:CDS 35.0%
TATGTCAAGTGTTCCTACTT+TGG - chr8.4:20757620-20757639 MS.gene033248:CDS 35.0%
TTAAATGCTCTTCTTGTCGT+AGG + chr8.4:20756526-20756545 None:intergenic 35.0%
TTCTATTCAATCCAGCTCTT+TGG + chr8.4:20756486-20756505 None:intergenic 35.0%
TTCTCTTTGTTGCATTCCAA+TGG + chr8.4:20757299-20757318 None:intergenic 35.0%
! ATCCTCCAATCAAGTTTTTG+GGG - chr8.4:20756165-20756184 MS.gene033248:CDS 35.0%
! CATCCTCCAATCAAGTTTTT+GGG - chr8.4:20756164-20756183 MS.gene033248:CDS 35.0%
! GGTTTCTGAAGGATTATTGA+AGG + chr8.4:20756401-20756420 None:intergenic 35.0%
! TCATCCTCCAATCAAGTTTT+TGG - chr8.4:20756163-20756182 MS.gene033248:CDS 35.0%
!!! CTTTTTGGTAATGCAGAATG+TGG - chr8.4:20756208-20756227 MS.gene033248:CDS 35.0%
!!! CTTTTTTGAAAGTCTCTTGG+CGG + chr8.4:20757411-20757430 None:intergenic 35.0%
!!! TTTTTTGAAAGTCTCTTGGC+GGG + chr8.4:20757410-20757429 None:intergenic 35.0%
AATGGACAGTGGAAGAAGAT+AGG - chr8.4:20756578-20756597 MS.gene033248:intron 40.0%
AGACATATGGACAGATGAAG+AGG - chr8.4:20757179-20757198 MS.gene033248:CDS 40.0%
ATCCAAGCTCATACAGAGAT+AGG - chr8.4:20757213-20757232 MS.gene033248:CDS 40.0%
ATGCTTGAAACTTCATCCTC+AGG + chr8.4:20756445-20756464 None:intergenic 40.0%
ATTGCATTCTCAGTTCTTCC+TGG + chr8.4:20757270-20757289 None:intergenic 40.0%
CAGAAGTTACCTGGAAGAAT+AGG - chr8.4:20756804-20756823 MS.gene033248:intron 40.0%
CAGATTGTTGAGTCAAATGG+TGG - chr8.4:20756746-20756765 MS.gene033248:intron 40.0%
CATATTGCTCAGAAGTTACC+TGG - chr8.4:20756795-20756814 MS.gene033248:intron 40.0%
CCTTTATGTCAGGCCTTAAA+TGG + chr8.4:20756857-20756876 None:intergenic 40.0%
GAACGAGGTTGAAGTTAAGA+AGG - chr8.4:20757719-20757738 MS.gene033248:CDS 40.0%
GAGATTGCAAAAAGATTGCC+AGG - chr8.4:20757249-20757268 MS.gene033248:CDS 40.0%
GATCAGTTTCATCATGTGCA+TGG - chr8.4:20756136-20756155 MS.gene033248:CDS 40.0%
GGTTGAAGTTAAGAAGGAGT+TGG - chr8.4:20757725-20757744 MS.gene033248:CDS 40.0%
TAAGAAGGAGTTGGATTTGG+TGG - chr8.4:20757734-20757753 MS.gene033248:CDS 40.0%
TGACAGGAATGAGCACTAAA+TGG + chr8.4:20756085-20756104 None:intergenic 40.0%
TGGTGGAACAACATGGAATA+AGG - chr8.4:20756763-20756782 MS.gene033248:intron 40.0%
TTCCTATCTCTGTATGAGCT+TGG + chr8.4:20757218-20757237 None:intergenic 40.0%
TTGGACCCCAAAAACTTGAT+TGG + chr8.4:20756173-20756192 None:intergenic 40.0%
TTTAGTGCTCATTCCTGTCA+TGG - chr8.4:20756085-20756104 MS.gene033248:CDS 40.0%
! AGTCAAATGGTGGAACAACA+TGG - chr8.4:20756756-20756775 MS.gene033248:intron 40.0%
! CCATTTAAGGCCTGACATAA+AGG - chr8.4:20756854-20756873 MS.gene033248:intron 40.0%
! CTTCGAACGACATGTTCTTT+TGG + chr8.4:20757331-20757350 None:intergenic 40.0%
! TTTAGCTCATCTTTCAGCCT+TGG + chr8.4:20756061-20756080 None:intergenic 40.0%
!! ATGCATTGGTTGTGATTGTG+AGG + chr8.4:20756017-20756036 None:intergenic 40.0%
!! CTCAATGACTTGGTTTCTGA+AGG + chr8.4:20756412-20756431 None:intergenic 40.0%
!! TGCATTGGTTGTGATTGTGA+GGG + chr8.4:20756016-20756035 None:intergenic 40.0%
CACTGTTTCCCTATTCTTCC+AGG + chr8.4:20756816-20756835 None:intergenic 45.0%
CATCTTTCAGCCTTGGTTTC+AGG + chr8.4:20756054-20756073 None:intergenic 45.0%
GACCCCAAAAACTTGATTGG+AGG + chr8.4:20756170-20756189 None:intergenic 45.0%
GGAAACAGTGCAGAGAAAGA+TGG - chr8.4:20756826-20756845 MS.gene033248:intron 45.0%
TGAGCATCAATTGGAGAACG+AGG - chr8.4:20757704-20757723 MS.gene033248:CDS 45.0%
TTTGGTGGAGATGATCTCTC+AGG - chr8.4:20757749-20757768 MS.gene033248:CDS 45.0%
! ACACATAGTTTGGCACTGAG+CGG + chr8.4:20757533-20757552 None:intergenic 45.0%
! TGATTTGCAATACGTGGCTG+AGG + chr8.4:20757495-20757514 None:intergenic 45.0%
! TGTCGTTCGAAGTATCCAAG+AGG - chr8.4:20757339-20757358 MS.gene033248:CDS 45.0%
!! GCGGGTTTTGATCCAAATTC+AGG + chr8.4:20757392-20757411 None:intergenic 45.0%
CAATCACAGTGAAGGGGCAA+TGG - chr8.4:20756560-20756579 MS.gene033248:CDS 50.0%
! TTTGGCACTGAGCGGTCATT+AGG + chr8.4:20757525-20757544 None:intergenic 50.0%
!! TCTTGCAGAAGAGTGCCTCT+TGG + chr8.4:20757357-20757376 None:intergenic 50.0%
AGTGAAGGGGCAATGGACAG+TGG - chr8.4:20756567-20756586 MS.gene033248:CDS 55.0%
TGGCTGAGGAAGCTGTGCTG+CGG + chr8.4:20757481-20757500 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 20755980 20757791 20755980 ID=MS.gene033248
chr8.4 mRNA 20755980 20757791 20755980 ID=MS.gene033248.t1;Parent=MS.gene033248
chr8.4 exon 20757172 20757791 20757172 ID=MS.gene033248.t1.exon1;Parent=MS.gene033248.t1
chr8.4 CDS 20757172 20757791 20757172 ID=cds.MS.gene033248.t1;Parent=MS.gene033248.t1
chr8.4 exon 20756896 20757022 20756896 ID=MS.gene033248.t1.exon2;Parent=MS.gene033248.t1
chr8.4 CDS 20756896 20757022 20756896 ID=cds.MS.gene033248.t1;Parent=MS.gene033248.t1
chr8.4 exon 20755980 20756594 20755980 ID=MS.gene033248.t1.exon3;Parent=MS.gene033248.t1
chr8.4 CDS 20755980 20756594 20755980 ID=cds.MS.gene033248.t1;Parent=MS.gene033248.t1
Gene Sequence

>MS.gene033248

ATGGTTTTCGACACAAATCTCAGAGAAAACTATCCCTCACAATCACAACCAATGCATTTGGAAGAAAACTACCTGAAACCAAGGCTGAAAGATGAGCTAAATCCATTTAGTGCTCATTCCTGTCATGGTAATTTCTTACAAGATTTTCAGCATATTGATCAGTTTCATCATGTGCATGGATCATCATCCTCCAATCAAGTTTTTGGGGTCCAAACTCAAAACTTTGATCTTTTTGGTAATGCAGAATGTGGAAATAGAGATTTTGATTTTTATGATGGAAAGTCTTTTGCTGAGAATAATAGTGGTAGCGAGCATGCTCATAACCTTATTGACAATTTTCAATATGATGGTTTTAGTTTGAATATCCCTAGAAGAAATCATCAACTTGATATTATGGTTGAAAACCATAGTTATTTTTCCTTCAATAATCCTTCAGAAACCAAGTCATTGAGTTATGTTGTACCTGAGGATGAAGTTTCAAGCATTGCACCGACAAATTATTACCAAAGAGCTGGATTGAATAGAAACAACGGGTTGTTATCTCCTACGACAAGAAGAGCATTTAAAGCGAAGAAGAAAACAATCACAGTGAAGGGGCAATGGACAGTGGAAGAAGATAGGTGCATAAATTTCTTTAAAACTTCTTGTTTACATAACTATATAATTAAGCTTGTTACATAATTTTTTTCATCACATTTTCAAGTTTTTGCATATTTTGGTTTTAATATAAAACACATATGTGCTTTGATTTAAATGCTTCTGCAAACAGATTGTTGAGTCAAATGGTGGAACAACATGGAATAAGGAAGTGGTCTCATATTGCTCAGAAGTTACCTGGAAGAATAGGGAAACAGTGCAGAGAAAGATGGCATAACCATTTAAGGCCTGACATAAAGGTTCCATTTTTTTTTCCACACACGTATATAGAATAAATTAATAGATACACACACTTTAGACAACTGAGTCTATACATACAATGTCATCAATGATAAATGCATGATCCAATATTTGAATTTTTGTTTCTCTTAACTTTCATATAAGGTAATATTTTAACTTGGTATGCATACTTTTTTTTGTCTTACAATTAACTAATTAAGTATCTCTATATTCTCACAAAGAGTTCGATGATTGCATGACACAAATTTATCCATACGAATTTTCCTTCTATATTAAACTTCAATTCGCGCATTTTTGCAGAAAGACATATGGACAGATGAAGAGGATAAGATATTGATCCAAGCTCATACAGAGATAGGAAATAAGTGGGCAGAGATTGCAAAAAGATTGCCAGGAAGAACTGAGAATGCAATAAAAAACCATTGGAATGCAACAAAGAGAAGGCAATATTCCAAAAGAACATGTCGTTCGAAGTATCCAAGAGGCACTCTTCTGCAAGAATATATCAAGAGCCTGAATTTGGATCAAAACCCGCCAAGAGACTTTCAAAAAAGATCTTCTGTTAAAGCCAAGAAAAAGATTACTTGTAGCACAAGCAAAGCCGCAGCACAGCTTCCTCAGCCACGTATTGCAAATCAATTTTGTCCTAATGACCGCTCAGTGCCAAACTATGTGTTCAATGATTTTTCTTTGGATGATAATTTGTTTGAAGAAGAGTGTGGTATTGATTCTCTGCTAGATGATATGTCAAGTGTTCCTACTTTGGATGAAAAAGAATTTGATGAAAAAGAATGTGATAAGAGAAGCATGCAAGTTGTTAATCTTGATGAGCATCAATTGGAGAACGAGGTTGAAGTTAAGAAGGAGTTGGATTTGGTGGAGATGATCTCTCAGGCTAATCAAAATATTAATTGA
Protein sequence

>MS.gene033248.t1

MVFDTNLRENYPSQSQPMHLEENYLKPRLKDELNPFSAHSCHGNFLQDFQHIDQFHHVHGSSSSNQVFGVQTQNFDLFGNAECGNRDFDFYDGKSFAENNSGSEHAHNLIDNFQYDGFSLNIPRRNHQLDIMVENHSYFSFNNPSETKSLSYVVPEDEVSSIAPTNYYQRAGLNRNNGLLSPTTRRAFKAKKKTITVKGQWTVEEDRLLSQMVEQHGIRKWSHIAQKLPGRIGKQCRERWHNHLRPDIKKDIWTDEEDKILIQAHTEIGNKWAEIAKRLPGRTENAIKNHWNATKRRQYSKRTCRSKYPRGTLLQEYIKSLNLDQNPPRDFQKRSSVKAKKKITCSTSKAAAQLPQPRIANQFCPNDRSVPNYVFNDFSLDDNLFEEECGIDSLLDDMSSVPTLDEKEFDEKECDKRSMQVVNLDEHQLENEVEVKKELDLVEMISQANQNIN