AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene033278

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene033278.t1 MTR_4g105170 96.296 189 6 1 1 189 1 188 1.22e-135 377
MS.gene033278.t1 MTR_3g077240 72.881 177 46 2 3 178 2 177 1.18e-85 251
MS.gene033278.t1 MTR_7g033800 61.376 189 56 4 1 189 1 172 1.05e-72 217
MS.gene033278.t1 MTR_6g005070 82.301 113 18 1 1 113 1 111 2.87e-65 197
MS.gene033278.t1 MTR_6g005080 79.130 115 22 1 1 115 2 114 8.72e-64 193
MS.gene033278.t1 MTR_8g040900 66.917 133 40 1 1 133 1 129 1.37e-53 171
MS.gene033278.t1 MTR_5g083230 64.957 117 38 1 9 122 4 120 1.75e-50 160
MS.gene033278.t1 MTR_3g073690 64.754 122 43 0 5 126 3 124 2.10e-50 161
MS.gene033278.t1 MTR_5g017950 69.091 110 34 0 5 114 2 111 4.86e-50 164
MS.gene033278.t1 MTR_3g452660 65.179 112 39 0 6 117 2 113 4.77e-48 158
MS.gene033278.t1 MTR_4g083680 65.385 104 36 0 10 113 14 117 3.26e-47 152
MS.gene033278.t1 MTR_3g031660 64.423 104 37 0 9 112 5 108 8.81e-47 151
MS.gene033278.t1 MTR_2g068760 62.617 107 40 0 10 116 12 118 8.88e-47 151
MS.gene033278.t1 MTR_5g083010 53.383 133 62 0 9 141 9 141 5.78e-46 149
MS.gene033278.t1 MTR_3g071590 66.019 103 35 0 10 112 7 109 8.46e-46 148
MS.gene033278.t1 MTR_5g083960 62.385 109 41 0 10 118 38 146 7.58e-45 147
MS.gene033278.t1 MTR_3g094690 61.468 109 42 0 10 118 46 154 1.95e-44 147
MS.gene033278.t1 MTR_3g071420 63.000 100 37 0 9 108 12 111 2.45e-42 140
MS.gene033278.t1 MTR_2g093310 57.009 107 46 0 10 116 32 138 3.24e-42 140
MS.gene033278.t1 MTR_3g094690 60.550 109 42 1 10 118 46 153 6.31e-42 141
MS.gene033278.t1 MTR_5g075020 58.015 131 54 1 10 140 42 171 6.08e-40 135
MS.gene033278.t1 MTR_4g060950 53.448 116 53 1 2 116 15 130 7.79e-40 134
MS.gene033278.t1 MTR_5g075020 58.015 131 54 1 10 140 46 175 1.32e-39 135
MS.gene033278.t1 MTR_7g096530 59.130 115 43 2 1 111 1 115 4.35e-39 133
MS.gene033278.t1 MTR_1g095850 58.416 101 42 0 12 112 73 173 1.63e-38 132
MS.gene033278.t1 MTR_8g036085 57.944 107 44 1 11 116 23 129 1.94e-38 132
MS.gene033278.t1 MTR_8g036105 54.918 122 52 2 11 131 18 137 5.44e-36 125
MS.gene033278.t1 MTR_1g070220 62.105 95 35 1 11 104 15 109 9.62e-36 124
MS.gene033278.t1 MTR_7g028905 51.376 109 53 0 10 118 4 112 1.20e-35 121
MS.gene033278.t1 MTR_7g074990 62.105 95 35 1 11 104 20 114 1.56e-35 124
MS.gene033278.t1 MTR_6g027710 51.852 108 51 1 10 116 39 146 5.17e-34 120
MS.gene033278.t1 MTR_1g070205 37.572 173 98 3 11 177 12 180 5.41e-34 120
MS.gene033278.t1 MTR_5g080470 52.475 101 47 1 6 105 2 102 5.87e-33 117
MS.gene033278.t1 MTR_8g079660 48.077 104 54 0 11 114 8 111 7.48e-33 118
MS.gene033278.t1 MTR_7g096610 58.333 96 39 1 10 104 7 102 1.28e-32 117
MS.gene033278.t1 MTR_5g093010 48.598 107 55 0 12 118 6 112 6.19e-32 112
MS.gene033278.t1 MTR_7g075230 44.643 168 73 7 11 171 12 166 1.00e-31 114
MS.gene033278.t1 MTR_8g079620 48.077 104 54 0 11 114 8 111 8.95e-31 112
MS.gene033278.t1 MTR_4g107450 48.958 96 49 0 12 107 11 106 5.37e-29 109
MS.gene033278.t1 MTR_8g079580 46.667 105 55 1 11 114 8 112 2.60e-28 105
MS.gene033278.t1 MTR_6g011200 44.898 98 53 1 9 105 7 104 8.35e-28 105
MS.gene033278.t1 MTR_6g027700 48.421 95 48 1 11 104 7 101 1.52e-27 103
MS.gene033278.t1 MTR_8g017090 43.000 100 57 0 12 111 13 112 1.34e-25 100
MS.gene033278.t1 MTR_6g011230 36.220 127 72 2 12 130 12 137 1.46e-24 95.5
MS.gene033278.t1 MTR_6g011250 49.398 83 41 1 9 90 7 89 2.26e-24 94.4
MS.gene033278.t1 MTR_4g099230 40.385 104 60 2 12 114 3 105 1.13e-23 92.0
MS.gene033278.t1 MTR_2g100020 43.011 93 53 0 12 104 20 112 2.46e-23 94.0
MS.gene033278.t1 MTR_5g085390 40.187 107 62 2 9 114 7 112 2.12e-20 85.5
MS.gene033278.t1 MTR_4g088035 35.556 90 58 0 10 99 5 94 6.32e-17 76.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene033278.t1 AT5G63090 68.333 180 45 3 1 171 1 177 1.78e-78 232
MS.gene033278.t1 AT5G63090 68.333 180 45 3 1 171 1 177 1.78e-78 232
MS.gene033278.t1 AT5G63090 68.333 180 45 3 1 171 1 177 1.78e-78 232
MS.gene033278.t1 AT5G63090 68.333 180 45 3 1 171 1 177 1.78e-78 232
MS.gene033278.t1 AT3G27650 78.182 110 24 0 5 114 33 142 2.81e-62 190
MS.gene033278.t1 AT1G65620 68.217 129 39 1 1 129 1 127 1.60e-52 167
MS.gene033278.t1 AT1G65620 68.217 129 39 1 1 129 1 127 1.60e-52 167
MS.gene033278.t1 AT1G65620 68.217 129 39 1 1 129 1 127 1.60e-52 167
MS.gene033278.t1 AT1G65620 68.217 129 39 1 1 129 1 127 1.60e-52 167
MS.gene033278.t1 AT1G65620 68.217 129 39 1 1 129 1 127 1.60e-52 167
MS.gene033278.t1 AT5G66870 60.839 143 45 3 1 142 1 133 7.74e-51 166
MS.gene033278.t1 AT2G23660 62.931 116 43 0 9 124 3 118 2.99e-49 162
MS.gene033278.t1 AT2G23660 62.931 116 43 0 9 124 3 118 2.99e-49 162
MS.gene033278.t1 AT2G23660 62.931 116 43 0 9 124 3 118 2.99e-49 162
MS.gene033278.t1 AT2G30130 64.286 112 40 0 9 120 6 117 3.27e-49 158
MS.gene033278.t1 AT1G31320 72.727 88 24 0 10 97 12 99 3.25e-44 145
MS.gene033278.t1 AT1G16530 59.829 117 45 2 10 124 13 129 1.48e-43 143
MS.gene033278.t1 AT1G07900 61.165 103 40 0 10 112 32 134 4.08e-43 142
MS.gene033278.t1 AT2G30340 60.952 105 41 0 10 114 52 156 1.17e-42 144
MS.gene033278.t1 AT2G30340 60.952 105 41 0 10 114 51 155 1.23e-42 144
MS.gene033278.t1 AT2G28500 58.879 107 44 0 10 116 54 160 2.34e-41 139
MS.gene033278.t1 AT3G11090 57.944 107 45 0 9 115 9 115 4.56e-41 136
MS.gene033278.t1 AT2G40470 63.810 105 38 0 10 114 19 123 8.23e-39 132
MS.gene033278.t1 AT2G40470 63.810 105 38 0 10 114 44 148 1.70e-38 132
MS.gene033278.t1 AT3G26660 55.000 100 45 0 12 111 6 105 9.43e-38 127
MS.gene033278.t1 AT3G26620 55.000 100 45 0 12 111 6 105 1.01e-37 127
MS.gene033278.t1 AT3G03760 56.731 104 44 1 10 112 50 153 1.93e-37 130
MS.gene033278.t1 AT4G00210 54.472 123 53 2 1 122 1 121 3.45e-37 128
MS.gene033278.t1 AT2G45420 63.043 92 33 1 14 104 40 131 1.38e-35 125
MS.gene033278.t1 AT4G00220 57.692 104 43 1 14 116 20 123 1.98e-35 124
MS.gene033278.t1 AT2G31310 38.503 187 84 5 10 170 6 187 5.94e-35 122
MS.gene033278.t1 AT2G42430 55.963 109 43 2 1 104 1 109 1.96e-34 122
MS.gene033278.t1 AT3G50510 45.902 122 64 1 10 129 11 132 9.01e-34 119
MS.gene033278.t1 AT3G50510 45.902 122 64 1 10 129 11 132 9.01e-34 119
MS.gene033278.t1 AT3G58190 56.250 96 41 1 11 105 11 106 3.12e-33 118
MS.gene033278.t1 AT2G45410 52.542 118 53 2 14 130 19 134 4.73e-33 117
MS.gene033278.t1 AT2G42440 53.608 97 44 1 10 105 6 102 2.00e-32 117
MS.gene033278.t1 AT5G06080 47.368 114 59 1 6 118 2 115 3.71e-32 114
MS.gene033278.t1 AT5G35900 49.000 100 51 0 12 111 6 105 1.12e-30 111
MS.gene033278.t1 AT3G13850 45.745 94 51 0 12 105 37 130 5.21e-28 106
MS.gene033278.t1 AT3G47870 41.748 103 60 0 12 114 37 139 4.25e-25 99.8
MS.gene033278.t1 AT1G72980 41.905 105 61 0 1 105 3 107 1.18e-23 93.6
MS.gene033278.t1 AT4G22700 39.640 111 65 2 12 121 6 115 6.03e-21 85.9
MS.gene033278.t1 AT1G06280 44.156 77 43 0 12 88 25 101 7.51e-18 78.2
MS.gene033278.t1 AT2G19820 34.694 98 63 1 2 98 3 100 2.99e-15 69.3
MS.gene033278.t1 AT5G15060 39.744 78 45 1 7 82 13 90 4.73e-15 68.9
MS.gene033278.t1 AT3G27940 38.806 67 41 0 10 76 4 70 1.04e-11 60.5
MS.gene033278.t1 AT3G27940 38.806 67 41 0 10 76 4 70 1.04e-11 60.5
MS.gene033278.t1 AT3G27940 38.806 67 41 0 10 76 4 70 1.04e-11 60.5

Find 55 sgRNAs with CRISPR-Local

Find 60 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAAACGTACACAAAATATT+TGG 0.186655 8.2:-19691820 MS.gene033278:CDS
CTAAACTGTCTTTGTGGAAT+TGG 0.275981 8.2:+19691529 None:intergenic
CGAGTTAGGGATCCAGTTTA+TGG 0.289758 8.2:-19691709 MS.gene033278:CDS
AGAGAGGCTGGAGGAGGTGG+AGG 0.297872 8.2:+19691583 None:intergenic
ACGAAGCCGAAGCACGAGTT+AGG 0.305462 8.2:-19691723 MS.gene033278:CDS
CTTTACCTTATTCTCTTCCT+TGG 0.333470 8.2:-19691456 MS.gene033278:CDS
ATGAGTGAAGGTGGAGGAGG+AGG 0.339514 8.2:-19691412 MS.gene033278:CDS
TCAGTCCAAGGAAGAGAATA+AGG 0.339719 8.2:+19691451 None:intergenic
AGTGAAGGTGGAGGAGGAGG+AGG 0.357862 8.2:-19691409 MS.gene033278:CDS
GAAGGTGGAGGAGGAGGAGG+AGG 0.363314 8.2:-19691406 MS.gene033278:CDS
AAAGAAGAATAAGTAGTAGT+AGG 0.401220 8.2:+19691475 None:intergenic
GCTCCTACACATCCATAAAC+TGG 0.405024 8.2:+19691697 None:intergenic
GAAAGAGAGGCTGGAGGAGG+TGG 0.409459 8.2:+19691580 None:intergenic
CTTCCACTAAACTGTCTTTG+TGG 0.427794 8.2:+19691523 None:intergenic
GGCTCTTCTGGAGGGAAGTA+AGG 0.432439 8.2:+19691853 None:intergenic
TGGAGGAGGTGGAGGGATAT+CGG 0.435988 8.2:+19691591 None:intergenic
AGTTAACTGCATCCTCCCTT+TGG 0.438074 8.2:+19691755 None:intergenic
GATATGAGTGAAGGTGGAGG+AGG 0.442790 8.2:-19691415 MS.gene033278:CDS
ATTCCACAAAGACAGTTTAG+TGG 0.446210 8.2:-19691526 MS.gene033278:CDS
TGGATCCCTAACTCGTGCTT+CGG 0.456667 8.2:+19691717 None:intergenic
CAGTTTAGTGGAAGAAATGA+AGG 0.473637 8.2:-19691514 MS.gene033278:CDS
TGAGGCACAGAAAGAGAGGC+TGG 0.482119 8.2:+19691571 None:intergenic
ACTGTCTTTGTGGAATTGGT+TGG 0.483148 8.2:+19691533 None:intergenic
TTGAGGAGAAAATGCATGCC+AGG 0.496470 8.2:-19691889 MS.gene033278:CDS
ACAAGTTCAAAGGCTTCAAA+AGG 0.500774 8.2:-19691656 MS.gene033278:CDS
CTGCATCCTCCCTTTGGTGA+GGG 0.501198 8.2:+19691761 None:intergenic
GCCTCTCTTTCTGTGCCTCA+AGG 0.505853 8.2:-19691568 MS.gene033278:CDS
CGAAGCCGAAGCACGAGTTA+GGG 0.512333 8.2:-19691722 MS.gene033278:CDS
GAGAGGCTGGAGGAGGTGGA+GGG 0.516068 8.2:+19691584 None:intergenic
CATCCTCCCTTTGGTGAGGG+AGG 0.527585 8.2:+19691764 None:intergenic
TTCTACAAAGACAAGTTCAA+AGG 0.528529 8.2:-19691666 MS.gene033278:CDS
GAGGTGGAGGGATATCGGTG+AGG 0.544709 8.2:+19691596 None:intergenic
AGGTGGAGGGATATCGGTGA+GGG 0.546572 8.2:+19691597 None:intergenic
GTGCTGCCTGCAAATTCTTG+AGG 0.549706 8.2:-19691906 MS.gene033278:CDS
ACAGAAAGAGAGGCTGGAGG+AGG 0.555018 8.2:+19691577 None:intergenic
CGAACTCCTCCCTCACCAAA+GGG 0.555403 8.2:-19691770 MS.gene033278:CDS
ACTGCATCCTCCCTTTGGTG+AGG 0.557366 8.2:+19691760 None:intergenic
TTGTCTTTGTAGAAAAGAGA+TGG 0.561057 8.2:+19691675 None:intergenic
GAGGGTATAGCGAAGAAGAT+CGG 0.563089 8.2:+19691615 None:intergenic
AAGAATTTGCAGGCAGCACA+AGG 0.573114 8.2:+19691910 None:intergenic
ACGAACTCCTCCCTCACCAA+AGG 0.580542 8.2:-19691771 MS.gene033278:CDS
GATCCAGTTTATGGATGTGT+AGG 0.582057 8.2:-19691700 MS.gene033278:CDS
TCCTTGAGGCACAGAAAGAG+AGG 0.595065 8.2:+19691567 None:intergenic
TCCTCAGTGGATATGAGTGA+AGG 0.615767 8.2:-19691424 MS.gene033278:CDS
TAAGGTGCAAAGATGCAACC+TGG 0.617157 8.2:+19691871 None:intergenic
TCAGTGGATATGAGTGAAGG+TGG 0.618537 8.2:-19691421 MS.gene033278:CDS
GTGGATATGAGTGAAGGTGG+AGG 0.633891 8.2:-19691418 MS.gene033278:CDS
ACTGAGGAAGTATCAGTCCA+AGG 0.638918 8.2:+19691439 None:intergenic
TTGGACTGATACTTCCTCAG+TGG 0.639081 8.2:-19691437 MS.gene033278:CDS
AGTTTAGTGGAAGAAATGAA+GGG 0.640159 8.2:-19691513 MS.gene033278:CDS
ACAAGGTGAATTGTATGCGC+TGG 0.642277 8.2:+19691927 None:intergenic
TGGACTGATATCATTCCTTG+AGG 0.655168 8.2:+19691553 None:intergenic
ACTCCTCCCTCACCAAAGGG+AGG 0.660217 8.2:-19691767 MS.gene033278:CDS
GGCACAGAAAGAGAGGCTGG+AGG 0.697106 8.2:+19691574 None:intergenic
ACCTTCACTCATATCCACTG+AGG 0.758906 8.2:+19691423 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AAAGAAGAATAAGTAGTAGT+AGG + chr8.2:19691861-19691880 None:intergenic 25.0%
AGTTTAGTGGAAGAAATGAA+GGG - chr8.2:19691820-19691839 MS.gene033278:CDS 30.0%
GCAAACGTACACAAAATATT+TGG - chr8.2:19691513-19691532 MS.gene033278:CDS 30.0%
TTCTACAAAGACAAGTTCAA+AGG - chr8.2:19691667-19691686 MS.gene033278:CDS 30.0%
TTGTCTTTGTAGAAAAGAGA+TGG + chr8.2:19691661-19691680 None:intergenic 30.0%
! TGTACGTTTGCAAATTTTTG+AGG + chr8.2:19691504-19691523 None:intergenic 30.0%
ACAAGTTCAAAGGCTTCAAA+AGG - chr8.2:19691677-19691696 MS.gene033278:CDS 35.0%
ATTCCACAAAGACAGTTTAG+TGG - chr8.2:19691807-19691826 MS.gene033278:CDS 35.0%
CAGTTTAGTGGAAGAAATGA+AGG - chr8.2:19691819-19691838 MS.gene033278:CDS 35.0%
CTAAACTGTCTTTGTGGAAT+TGG + chr8.2:19691807-19691826 None:intergenic 35.0%
CTTTACCTTATTCTCTTCCT+TGG - chr8.2:19691877-19691896 MS.gene033278:CDS 35.0%
! TTTTCTCCTCAAGAATTTGC+AGG + chr8.2:19691436-19691455 None:intergenic 35.0%
ACTGTCTTTGTGGAATTGGT+TGG + chr8.2:19691803-19691822 None:intergenic 40.0%
CTTCCACTAAACTGTCTTTG+TGG + chr8.2:19691813-19691832 None:intergenic 40.0%
GATCCAGTTTATGGATGTGT+AGG - chr8.2:19691633-19691652 MS.gene033278:CDS 40.0%
TCAGTCCAAGGAAGAGAATA+AGG + chr8.2:19691885-19691904 None:intergenic 40.0%
TGGACTGATATCATTCCTTG+AGG + chr8.2:19691783-19691802 None:intergenic 40.0%
!!! AATTTTTGAGGCTCTTCTGG+AGG + chr8.2:19691492-19691511 None:intergenic 40.0%
!!! ATTTTTGAGGCTCTTCTGGA+GGG + chr8.2:19691491-19691510 None:intergenic 40.0%
!!! GCAAATTTTTGAGGCTCTTC+TGG + chr8.2:19691495-19691514 None:intergenic 40.0%
AAGAATTTGCAGGCAGCACA+AGG + chr8.2:19691426-19691445 None:intergenic 45.0%
ACAAGGTGAATTGTATGCGC+TGG + chr8.2:19691409-19691428 None:intergenic 45.0%
ACCTTCACTCATATCCACTG+AGG + chr8.2:19691913-19691932 None:intergenic 45.0%
AGTTAACTGCATCCTCCCTT+TGG + chr8.2:19691581-19691600 None:intergenic 45.0%
CGAGTTAGGGATCCAGTTTA+TGG - chr8.2:19691624-19691643 MS.gene033278:CDS 45.0%
GCTCCTACACATCCATAAAC+TGG + chr8.2:19691639-19691658 None:intergenic 45.0%
TAAGGTGCAAAGATGCAACC+TGG + chr8.2:19691465-19691484 None:intergenic 45.0%
TCAGTGGATATGAGTGAAGG+TGG - chr8.2:19691912-19691931 MS.gene033278:CDS 45.0%
TCCTCAGTGGATATGAGTGA+AGG - chr8.2:19691909-19691928 MS.gene033278:CDS 45.0%
TTGAGGAGAAAATGCATGCC+AGG - chr8.2:19691444-19691463 MS.gene033278:CDS 45.0%
TTGGACTGATACTTCCTCAG+TGG - chr8.2:19691896-19691915 MS.gene033278:CDS 45.0%
! GAGGGTATAGCGAAGAAGAT+CGG + chr8.2:19691721-19691740 None:intergenic 45.0%
!! ACTGAGGAAGTATCAGTCCA+AGG + chr8.2:19691897-19691916 None:intergenic 45.0%
GATATGAGTGAAGGTGGAGG+AGG - chr8.2:19691918-19691937 MS.gene033278:CDS 50.0%
GTGCTGCCTGCAAATTCTTG+AGG - chr8.2:19691427-19691446 MS.gene033278:CDS 50.0%
GTGGATATGAGTGAAGGTGG+AGG - chr8.2:19691915-19691934 MS.gene033278:CDS 50.0%
TCCTTGAGGCACAGAAAGAG+AGG + chr8.2:19691769-19691788 None:intergenic 50.0%
TGGATCCCTAACTCGTGCTT+CGG + chr8.2:19691619-19691638 None:intergenic 50.0%
ACAGAAAGAGAGGCTGGAGG+AGG + chr8.2:19691759-19691778 None:intergenic 55.0%
ACGAACTCCTCCCTCACCAA+AGG - chr8.2:19691562-19691581 MS.gene033278:CDS 55.0%
ACGAAGCCGAAGCACGAGTT+AGG - chr8.2:19691610-19691629 MS.gene033278:CDS 55.0%
ACTGCATCCTCCCTTTGGTG+AGG + chr8.2:19691576-19691595 None:intergenic 55.0%
AGGTGGAGGGATATCGGTGA+GGG + chr8.2:19691739-19691758 None:intergenic 55.0%
ATGAGTGAAGGTGGAGGAGG+AGG - chr8.2:19691921-19691940 MS.gene033278:CDS 55.0%
CGAACTCCTCCCTCACCAAA+GGG - chr8.2:19691563-19691582 MS.gene033278:CDS 55.0%
CGAAGCCGAAGCACGAGTTA+GGG - chr8.2:19691611-19691630 MS.gene033278:CDS 55.0%
CTGCATCCTCCCTTTGGTGA+GGG + chr8.2:19691575-19691594 None:intergenic 55.0%
GCCTCTCTTTCTGTGCCTCA+AGG - chr8.2:19691765-19691784 MS.gene033278:CDS 55.0%
TGAGGCACAGAAAGAGAGGC+TGG + chr8.2:19691765-19691784 None:intergenic 55.0%
TGGAGGAGGTGGAGGGATAT+CGG + chr8.2:19691745-19691764 None:intergenic 55.0%
! GGCTCTTCTGGAGGGAAGTA+AGG + chr8.2:19691483-19691502 None:intergenic 55.0%
ACTCCTCCCTCACCAAAGGG+AGG - chr8.2:19691566-19691585 MS.gene033278:CDS 60.0%
AGTGAAGGTGGAGGAGGAGG+AGG - chr8.2:19691924-19691943 MS.gene033278:CDS 60.0%
CATCCTCCCTTTGGTGAGGG+AGG + chr8.2:19691572-19691591 None:intergenic 60.0%
GAAAGAGAGGCTGGAGGAGG+TGG + chr8.2:19691756-19691775 None:intergenic 60.0%
GAGGTGGAGGGATATCGGTG+AGG + chr8.2:19691740-19691759 None:intergenic 60.0%
GGCACAGAAAGAGAGGCTGG+AGG + chr8.2:19691762-19691781 None:intergenic 60.0%
AGAGAGGCTGGAGGAGGTGG+AGG + chr8.2:19691753-19691772 None:intergenic 65.0%
GAAGGTGGAGGAGGAGGAGG+AGG - chr8.2:19691927-19691946 MS.gene033278:CDS 65.0%
GAGAGGCTGGAGGAGGTGGA+GGG + chr8.2:19691752-19691771 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 19691393 19691962 19691393 ID=MS.gene033278
chr8.2 mRNA 19691393 19691962 19691393 ID=MS.gene033278.t1;Parent=MS.gene033278
chr8.2 exon 19691393 19691962 19691393 ID=MS.gene033278.t1.exon1;Parent=MS.gene033278.t1
chr8.2 CDS 19691393 19691962 19691393 ID=cds.MS.gene033278.t1;Parent=MS.gene033278.t1
Gene Sequence

>MS.gene033278

ATGGCATCATCATCCAGCGCATACAATTCACCTTGTGCTGCCTGCAAATTCTTGAGGAGAAAATGCATGCCAGGTTGCATCTTTGCACCTTACTTCCCTCCAGAAGAGCCTCAAAAATTTGCAAACGTACACAAAATATTTGGTGCTAGCAATGTCACAAAGCTTCTCAACGAACTCCTCCCTCACCAAAGGGAGGATGCAGTTAACTCACTTGCTTACGAAGCCGAAGCACGAGTTAGGGATCCAGTTTATGGATGTGTAGGAGCCATCTCTTTTCTACAAAGACAAGTTCAAAGGCTTCAAAAGGAACTCGACGCTGCTAACACCGATCTTCTTCGCTATACCCTCACCGATATCCCTCCACCTCCTCCAGCCTCTCTTTCTGTGCCTCAAGGAATGATATCAGTCCAACCAATTCCACAAAGACAGTTTAGTGGAAGAAATGAAGGGCTTTATAGACAATCTCCTACTACTACTTATTCTTCTTTACCTTATTCTCTTCCTTGGACTGATACTTCCTCAGTGGATATGAGTGAAGGTGGAGGAGGAGGAGGAGGAAATCATATGTGA
Protein sequence

>MS.gene033278.t1

MASSSSAYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANTDLLRYTLTDIPPPPPASLSVPQGMISVQPIPQRQFSGRNEGLYRQSPTTTYSSLPYSLPWTDTSSVDMSEGGGGGGGNHM