Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033325.t1 | XP_003608891.1 | 97 | 363 | 10 | 1 | 1 | 363 | 1 | 362 | 6.40E-195 | 689.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033325.t1 | Q94BN0 | 57.0 | 330 | 129 | 6 | 15 | 332 | 32 | 360 | 3.8e-95 | 349.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033325.t1 | G7JMM8 | 97.0 | 363 | 10 | 1 | 1 | 363 | 1 | 362 | 4.6e-195 | 689.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene033325.t1 | TR | TAZ |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033325.t1 | MTR_4g104140 | 97.796 | 363 | 7 | 1 | 1 | 363 | 1 | 362 | 0.0 | 744 |
| MS.gene033325.t1 | MTR_4g104140 | 98.587 | 283 | 4 | 0 | 81 | 363 | 10 | 292 | 0.0 | 586 |
| MS.gene033325.t1 | MTR_3g075270 | 53.929 | 280 | 126 | 2 | 55 | 334 | 3 | 279 | 1.15e-111 | 328 |
| MS.gene033325.t1 | MTR_5g015680 | 45.973 | 298 | 154 | 7 | 18 | 313 | 68 | 360 | 1.98e-84 | 261 |
| MS.gene033325.t1 | MTR_5g015680 | 46.309 | 298 | 153 | 7 | 18 | 313 | 107 | 399 | 7.56e-84 | 261 |
| MS.gene033325.t1 | MTR_5g015680 | 47.328 | 262 | 132 | 6 | 58 | 317 | 12 | 269 | 3.33e-76 | 236 |
| MS.gene033325.t1 | MTR_4g104170 | 83.333 | 36 | 5 | 1 | 305 | 340 | 56 | 90 | 5.98e-12 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033325.t1 | AT3G48360 | 61.515 | 330 | 114 | 6 | 15 | 332 | 32 | 360 | 1.96e-133 | 385 |
| MS.gene033325.t1 | AT5G63160 | 62.540 | 315 | 108 | 5 | 14 | 319 | 22 | 335 | 2.54e-130 | 377 |
| MS.gene033325.t1 | AT3G48360 | 63.636 | 286 | 92 | 5 | 15 | 289 | 32 | 316 | 3.27e-120 | 351 |
| MS.gene033325.t1 | AT5G63160 | 63.732 | 284 | 94 | 4 | 14 | 289 | 22 | 304 | 3.04e-119 | 347 |
| MS.gene033325.t1 | AT5G63160 | 64.634 | 246 | 79 | 4 | 81 | 319 | 6 | 250 | 7.82e-104 | 307 |
| MS.gene033325.t1 | AT3G48360 | 62.745 | 255 | 85 | 4 | 87 | 332 | 1 | 254 | 1.53e-103 | 305 |
| MS.gene033325.t1 | AT5G67480 | 45.364 | 302 | 159 | 6 | 18 | 317 | 61 | 358 | 7.00e-83 | 257 |
| MS.gene033325.t1 | AT5G67480 | 45.364 | 302 | 159 | 6 | 18 | 317 | 61 | 358 | 7.00e-83 | 257 |
| MS.gene033325.t1 | AT5G67480 | 45.364 | 302 | 159 | 6 | 18 | 317 | 72 | 369 | 9.29e-83 | 257 |
| MS.gene033325.t1 | AT4G37610 | 42.904 | 303 | 164 | 8 | 18 | 317 | 56 | 352 | 6.64e-76 | 239 |
| MS.gene033325.t1 | AT1G05690 | 41.528 | 301 | 170 | 5 | 18 | 317 | 55 | 350 | 1.76e-74 | 235 |
| MS.gene033325.t1 | AT1G55760 | 33.835 | 133 | 79 | 4 | 18 | 147 | 165 | 291 | 6.30e-13 | 69.3 |
| MS.gene033325.t1 | AT3G56230 | 24.845 | 161 | 120 | 1 | 25 | 184 | 120 | 280 | 2.10e-12 | 67.4 |
Find 96 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGAAGGAACGCCGTGAATT+TGG | 0.203367 | 8.2:+20343519 | None:intergenic |
| CTTGCAATGTTCCTCTTTGC+AGG | 0.245278 | 8.2:-20342612 | MS.gene033325:intron |
| CCTTGCTAGTAGTTTCCATT+TGG | 0.271352 | 8.2:+20340405 | None:intergenic |
| GTGAATTTGGATTATTCTTT+CGG | 0.293435 | 8.2:+20343532 | None:intergenic |
| ATGAATAAAGACATCATATT+CGG | 0.296060 | 8.2:+20343754 | None:intergenic |
| TTCTGAGGCGATGGAGTGTT+TGG | 0.329039 | 8.2:-20342857 | MS.gene033325:CDS |
| ACTTGATATCCTCCGCTTCA+TGG | 0.330110 | 8.2:-20343102 | MS.gene033325:CDS |
| GACCTCCATTGGTGTGGTTT+GGG | 0.335478 | 8.2:+20343784 | None:intergenic |
| CTTGCTAGTAGTTTCCATTT+GGG | 0.348881 | 8.2:+20340406 | None:intergenic |
| AATCGTGGGATCAGATGTTT+TGG | 0.358065 | 8.2:-20340301 | MS.gene033325:CDS |
| CGACCTCCATTGGTGTGGTT+TGG | 0.364602 | 8.2:+20343783 | None:intergenic |
| TGCAAGAATCATCAGTTTGT+TGG | 0.365276 | 8.2:+20342629 | None:intergenic |
| TCTGATCCCACGATTGTCTA+TGG | 0.399851 | 8.2:+20340309 | None:intergenic |
| TCAATAATGTTCTCGAAAAC+AGG | 0.405232 | 8.2:+20343578 | None:intergenic |
| CAGTTGCACGGAGGATGAAA+TGG | 0.408781 | 8.2:-20343372 | MS.gene033325:CDS |
| AGAGGGTGAAGGGAGGCTGC+TGG | 0.412837 | 8.2:-20342699 | MS.gene033325:CDS |
| ACCAGGATGCTTGTGTGGGC+TGG | 0.439380 | 8.2:+20343710 | None:intergenic |
| TTCAAGCACAGGATCATGTT+TGG | 0.441776 | 8.2:+20343124 | None:intergenic |
| CGCCAGGCTCTGCGATGCAC+CGG | 0.448288 | 8.2:-20343225 | MS.gene033325:CDS |
| CAGACAATTTCAATTGAGAA+TGG | 0.449145 | 8.2:-20340452 | MS.gene033325:CDS |
| TGAATAAAGACATCATATTC+GGG | 0.450560 | 8.2:+20343755 | None:intergenic |
| TTATTAACCTCAACATGGTA+TGG | 0.459852 | 8.2:+20342799 | None:intergenic |
| TTGAACCGCGTTGAAGTGAT+TGG | 0.469408 | 8.2:+20343172 | None:intergenic |
| TGAGAATGGAGCAAGAGAAA+AGG | 0.470643 | 8.2:-20340438 | MS.gene033325:CDS |
| GTCTTTATTCATACTTCTGA+TGG | 0.471148 | 8.2:-20343743 | MS.gene033325:CDS |
| GATGAAAGCGGTTACGGCGG+TGG | 0.476910 | 8.2:+20343499 | None:intergenic |
| GTAGCCGATGAAAGCGGTTA+CGG | 0.477754 | 8.2:+20343493 | None:intergenic |
| ATCCGGTGCATCGCAGAGCC+TGG | 0.478068 | 8.2:+20343223 | None:intergenic |
| AGCAAATTCTCCACCTGTCA+AGG | 0.481574 | 8.2:-20342760 | MS.gene033325:CDS |
| AAAGGAAAGATGATCCCAAA+TGG | 0.490170 | 8.2:-20340420 | MS.gene033325:CDS |
| CAGAAGCTGAAGCCCTTGAC+AGG | 0.502805 | 8.2:+20342747 | None:intergenic |
| AACTAACCAGGATGCTTGTG+TGG | 0.507204 | 8.2:+20343705 | None:intergenic |
| CATCGCAGAGCCTGGCGAGT+TGG | 0.510849 | 8.2:+20343231 | None:intergenic |
| TGCGGAACTTTCTGAGGCGA+TGG | 0.528118 | 8.2:-20342866 | MS.gene033325:CDS |
| TCGGCTACCTCTACTCATCC+AGG | 0.528548 | 8.2:-20343478 | MS.gene033325:intron |
| TATAGAGGAGAGAGAAATCG+AGG | 0.529791 | 8.2:-20342915 | MS.gene033325:intron |
| GAAAGAATAATCCAAATTCA+CGG | 0.535992 | 8.2:-20343530 | MS.gene033325:CDS |
| TCCAGCCCACACAAGCATCC+TGG | 0.542058 | 8.2:-20343711 | MS.gene033325:intron |
| CTCAAACAAAGATGCATCAA+AGG | 0.544591 | 8.2:-20343296 | MS.gene033325:CDS |
| TCGGGTAAGACGACCTCCAT+TGG | 0.548298 | 8.2:+20343773 | None:intergenic |
| GTGTTTGGAGCATATATGTA+CGG | 0.548333 | 8.2:-20342842 | MS.gene033325:CDS |
| GAGGATGAAATGGACAAATA+CGG | 0.550313 | 8.2:-20343362 | MS.gene033325:CDS |
| ACCGCCGTAACCGCTTTCAT+CGG | 0.550954 | 8.2:-20343497 | MS.gene033325:CDS |
| ACACGTGAGATAGTGCCAAC+AGG | 0.553618 | 8.2:+20343333 | None:intergenic |
| ACATGCAAGAAGAGGGTGAA+GGG | 0.559984 | 8.2:-20342709 | MS.gene033325:CDS |
| ATGGAAACTACTAGCAAGGA+AGG | 0.562140 | 8.2:-20340401 | MS.gene033325:CDS |
| TGGATGTACTCCAACTCGCC+AGG | 0.562979 | 8.2:-20343241 | MS.gene033325:CDS |
| CGCTTTCGTCCATGAAGCGG+AGG | 0.563948 | 8.2:+20343093 | None:intergenic |
| ATGCATCTTTGTTTGAGTTG+CGG | 0.567744 | 8.2:+20343302 | None:intergenic |
| GGGTGAAGGGAGGCTGCTGG+AGG | 0.568462 | 8.2:-20342696 | MS.gene033325:CDS |
| TTTCGCTTTCGTCCATGAAG+CGG | 0.570395 | 8.2:+20343090 | None:intergenic |
| AAAGCGGTTACGGCGGTGGA+AGG | 0.571422 | 8.2:+20343503 | None:intergenic |
| GCATCAAAGGTCTTGTTCAA+CGG | 0.574251 | 8.2:-20343283 | MS.gene033325:CDS |
| CAAATACGGAATCCACCTGT+TGG | 0.576636 | 8.2:-20343348 | MS.gene033325:CDS |
| AAGGAAGGTTGCCTCAGCTA+AGG | 0.578016 | 8.2:-20340386 | MS.gene033325:CDS |
| CCAAATGGAAACTACTAGCA+AGG | 0.585999 | 8.2:-20340405 | MS.gene033325:CDS |
| TTGGAGCATATATGTACGGA+AGG | 0.591498 | 8.2:-20342838 | MS.gene033325:CDS |
| AGGATATCAAGTTCAAGCAC+AGG | 0.591612 | 8.2:+20343113 | None:intergenic |
| GGAAGCATAGAGAGGAGCAA+GGG | 0.591806 | 8.2:-20342894 | MS.gene033325:CDS |
| ATACAACGGATACGGAGATC+CGG | 0.598941 | 8.2:+20343206 | None:intergenic |
| GCAAATTCTCCACCTGTCAA+GGG | 0.602836 | 8.2:-20342759 | MS.gene033325:CDS |
| GTTGTATGCGGAACTTTCTG+AGG | 0.605270 | 8.2:-20342872 | MS.gene033325:CDS |
| GTAGCTTCATACAACGGATA+CGG | 0.605346 | 8.2:+20343198 | None:intergenic |
| GAATACCCAAACCACACCAA+TGG | 0.607266 | 8.2:-20343789 | MS.gene033325:CDS |
| TCGGAGCTGCGTTGTTTACG+CGG | 0.613669 | 8.2:+20343551 | None:intergenic |
| AAGCTGAAGCCCTTGACAGG+TGG | 0.613763 | 8.2:+20342750 | None:intergenic |
| AGGAAGCATAGAGAGGAGCA+AGG | 0.616562 | 8.2:-20342895 | MS.gene033325:CDS |
| TAAACAACTAACCTGCAAAG+AGG | 0.620623 | 8.2:+20342601 | None:intergenic |
| CAGGTGGAGAATTTGCTACA+CGG | 0.624063 | 8.2:+20342766 | None:intergenic |
| CGTTGGACCATACCATGTTG+AGG | 0.625619 | 8.2:-20342806 | MS.gene033325:CDS |
| TACCCAAACCACACCAATGG+AGG | 0.626720 | 8.2:-20343786 | MS.gene033325:CDS |
| TAAGACGACCTCCATTGGTG+TGG | 0.627752 | 8.2:+20343778 | None:intergenic |
| CTACAAACCTGGATGAGTAG+AGG | 0.636623 | 8.2:+20343471 | None:intergenic |
| ATATTGTAACAATAATGTCT+CGG | 0.638704 | 8.2:-20340269 | MS.gene033325:CDS |
| GCTGGAGGTGCAAACGTATG+TGG | 0.643612 | 8.2:-20342681 | MS.gene033325:CDS |
| TTTCTTTATTAACCTCAACA+TGG | 0.646312 | 8.2:+20342794 | None:intergenic |
| GAAATCGAGGAAGCATAGAG+AGG | 0.652687 | 8.2:-20342902 | MS.gene033325:CDS |
| GCACAGGATCATGTTTGGTG+AGG | 0.659496 | 8.2:+20343129 | None:intergenic |
| GAGTGACCATAGACAATCGT+GGG | 0.660262 | 8.2:-20340315 | MS.gene033325:CDS |
| GCCGATGAAAGCGGTTACGG+CGG | 0.661788 | 8.2:+20343496 | None:intergenic |
| TGCAAGAAGAGGGTGAAGGG+AGG | 0.663791 | 8.2:-20342706 | MS.gene033325:CDS |
| ACGGAAGGGTGCACCGACGT+TGG | 0.666831 | 8.2:-20342823 | MS.gene033325:CDS |
| CGTGAGATAGTGCCAACAGG+TGG | 0.667055 | 8.2:+20343336 | None:intergenic |
| GGAAAACATAACCTTAGCTG+AGG | 0.673989 | 8.2:+20340375 | None:intergenic |
| GTAGAGGTAGCCGATGAAAG+CGG | 0.674697 | 8.2:+20343487 | None:intergenic |
| AACATGCAAGAAGAGGGTGA+AGG | 0.677915 | 8.2:-20342710 | MS.gene033325:CDS |
| TGGAGCATATATGTACGGAA+GGG | 0.681205 | 8.2:-20342837 | MS.gene033325:CDS |
| AGAGGAGCAAGGGTTGTATG+CGG | 0.686478 | 8.2:-20342884 | MS.gene033325:CDS |
| TGGTGAGTAGCTTCATACAA+CGG | 0.689964 | 8.2:+20343192 | None:intergenic |
| ACTAACCAGGATGCTTGTGT+GGG | 0.692654 | 8.2:+20343706 | None:intergenic |
| CTCGAAAACAGGAGATACCG+AGG | 0.700797 | 8.2:+20343589 | None:intergenic |
| AGAGTGACCATAGACAATCG+TGG | 0.708473 | 8.2:-20340316 | MS.gene033325:CDS |
| ACGGTTAACATCAGAAAACG+TGG | 0.721632 | 8.2:-20343264 | MS.gene033325:CDS |
| AACATGGTATGGTCCAACGT+CGG | 0.721753 | 8.2:+20342810 | None:intergenic |
| GTTAACATCAGAAAACGTGG+TGG | 0.747454 | 8.2:-20343261 | MS.gene033325:CDS |
| ACTCACCAATCACTTCAACG+CGG | 0.835800 | 8.2:-20343177 | MS.gene033325:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACAATATACAATAAATTAA+CGG | + | chr8.2:20342931-20342950 | None:intergenic | 10.0% |
| !! | TATATTGTATATTTGTATAT+GGG | - | chr8.2:20342942-20342961 | MS.gene033325:intron | 10.0% |
| !!! | AAATAATTAAGCTATTTTTT+TGG | - | chr8.2:20343561-20343580 | MS.gene033325:CDS | 10.0% |
| !!! | AGATATTTATTAATTTTGAT+GGG | + | chr8.2:20343424-20343443 | None:intergenic | 10.0% |
| !!! | TAGATATTTATTAATTTTGA+TGG | + | chr8.2:20343425-20343444 | None:intergenic | 10.0% |
| !! | ATAATCATGGAATTAATTAA+AGG | - | chr8.2:20341583-20341602 | MS.gene033325:intron | 15.0% |
| !! | ATATTGTATATTTGTATATG+GGG | - | chr8.2:20342943-20342962 | MS.gene033325:intron | 15.0% |
| !! | GTATATTGTATATTTGTATA+TGG | - | chr8.2:20342941-20342960 | MS.gene033325:intron | 15.0% |
| !! | TAATCATGGAATTAATTAAA+GGG | - | chr8.2:20341584-20341603 | MS.gene033325:intron | 15.0% |
| !! | TGTTAATTATTTCATAATCA+AGG | + | chr8.2:20342391-20342410 | None:intergenic | 15.0% |
| !!! | AATTTCATTTTTGTTTAGAT+GGG | - | chr8.2:20342175-20342194 | MS.gene033325:intron | 15.0% |
| !!! | ACTTATTTTATATTTGAGAT+TGG | - | chr8.2:20341944-20341963 | MS.gene033325:intron | 15.0% |
| !!! | ATGTTCAAATATTCTTTTTT+AGG | + | chr8.2:20342774-20342793 | None:intergenic | 15.0% |
| !! | ATATTGTAACAATAATGTCT+CGG | - | chr8.2:20343774-20343793 | MS.gene033325:CDS | 20.0% |
| !! | ATGAATAAAGACATCATATT+CGG | + | chr8.2:20340292-20340311 | None:intergenic | 20.0% |
| !! | GTTGTAAATCAATAATTAAC+AGG | - | chr8.2:20340431-20340450 | MS.gene033325:CDS | 20.0% |
| !! | TGATTATTATTGTGTTATAG+AGG | - | chr8.2:20341113-20341132 | MS.gene033325:intron | 20.0% |
| !! | TTAAGAAAAATACGAACAAT+TGG | + | chr8.2:20340369-20340388 | None:intergenic | 20.0% |
| !! | TTATTTCGCTCATAAATATA+AGG | - | chr8.2:20341862-20341881 | MS.gene033325:intron | 20.0% |
| !!! | CAATTTCATTTTTGTTTAGA+TGG | - | chr8.2:20342174-20342193 | MS.gene033325:intron | 20.0% |
| !!! | CTAATTTTATAGAGATGAAT+CGG | - | chr8.2:20343272-20343291 | MS.gene033325:CDS | 20.0% |
| !!! | TATTTTATATTTGAGATTGG+AGG | - | chr8.2:20341947-20341966 | MS.gene033325:intron | 20.0% |
| ! | AAAGCTGATGTATTTGATTA+AGG | - | chr8.2:20341899-20341918 | MS.gene033325:intron | 25.0% |
| ! | AAGGTAGCTAATAATAACTT+GGG | + | chr8.2:20343342-20343361 | None:intergenic | 25.0% |
| ! | AATCGATTGTTACTCTTAAA+CGG | - | chr8.2:20341983-20342002 | MS.gene033325:intron | 25.0% |
| ! | AGAATAGTACATCATAATCA+TGG | - | chr8.2:20341570-20341589 | MS.gene033325:intron | 25.0% |
| ! | GAAAGAATAATCCAAATTCA+CGG | - | chr8.2:20340513-20340532 | MS.gene033325:intron | 25.0% |
| ! | GTGAATTTGGATTATTCTTT+CGG | + | chr8.2:20340514-20340533 | None:intergenic | 25.0% |
| ! | TGAACATTGCAATATTTGAT+TGG | + | chr8.2:20342970-20342989 | None:intergenic | 25.0% |
| ! | TGAATAAAGACATCATATTC+GGG | + | chr8.2:20340291-20340310 | None:intergenic | 25.0% |
| ! | TTTCTTTATTAACCTCAACA+TGG | + | chr8.2:20341252-20341271 | None:intergenic | 25.0% |
| !! | AGCTCTAACAAAAGATTATA+AGG | + | chr8.2:20341526-20341545 | None:intergenic | 25.0% |
| !! | TGTTCGTATTTTTCTTAACT+CGG | - | chr8.2:20340371-20340390 | MS.gene033325:CDS | 25.0% |
| !! | TTTATTGGTTAAATTGCTGT+CGG | + | chr8.2:20342455-20342474 | None:intergenic | 25.0% |
| !!! | AGAAACTATTTTGACCAAAA+TGG | + | chr8.2:20342232-20342251 | None:intergenic | 25.0% |
| !!! | CAAGTCTCTTGATATTTTTA+GGG | - | chr8.2:20343036-20343055 | MS.gene033325:intron | 25.0% |
| !!! | TTTTGTTTAGATGGGTAAAA+TGG | - | chr8.2:20342183-20342202 | MS.gene033325:intron | 25.0% |
| AAATCGCAACAACATTTGTA+TGG | + | chr8.2:20341841-20341860 | None:intergenic | 30.0% | |
| AAATTCTTGAAATCAGCTCT+CGG | - | chr8.2:20342655-20342674 | MS.gene033325:CDS | 30.0% | |
| AATAAATGCAAATACACGCT+CGG | - | chr8.2:20342629-20342648 | MS.gene033325:CDS | 30.0% | |
| AATCAATAATTAACAGGCCT+CGG | - | chr8.2:20340437-20340456 | MS.gene033325:CDS | 30.0% | |
| AATCGCAACAACATTTGTAT+GGG | + | chr8.2:20341840-20341859 | None:intergenic | 30.0% | |
| AGAAAACAAACACAGAAACA+TGG | + | chr8.2:20343476-20343495 | None:intergenic | 30.0% | |
| ATAATCGTTAGTCCTTGAAT+CGG | + | chr8.2:20340400-20340419 | None:intergenic | 30.0% | |
| ATATACAAGTACTACAAACC+TGG | + | chr8.2:20340586-20340605 | None:intergenic | 30.0% | |
| ATATATTGCTACCTGATCAA+CGG | + | chr8.2:20342879-20342898 | None:intergenic | 30.0% | |
| ATTATTAGCTACCTTCAACT+TGG | - | chr8.2:20343347-20343366 | MS.gene033325:CDS | 30.0% | |
| CAAAAAAAAAAGCTGGTAGT+GGG | - | chr8.2:20342603-20342622 | MS.gene033325:intron | 30.0% | |
| CAGACAATTTCAATTGAGAA+TGG | - | chr8.2:20343591-20343610 | MS.gene033325:CDS | 30.0% | |
| CCACTAAGAACAAAATCTAA+CGG | + | chr8.2:20342355-20342374 | None:intergenic | 30.0% | |
| CCTAAAAATATCAAGAGACT+TGG | + | chr8.2:20343038-20343057 | None:intergenic | 30.0% | |
| GAAAACAAACACAGAAACAT+GGG | + | chr8.2:20343475-20343494 | None:intergenic | 30.0% | |
| GAAAACATAGCGAATTTATC+TGG | - | chr8.2:20342318-20342337 | MS.gene033325:intron | 30.0% | |
| GAAGGTAGCTAATAATAACT+TGG | + | chr8.2:20343343-20343362 | None:intergenic | 30.0% | |
| GTCTTTATTCATACTTCTGA+TGG | - | chr8.2:20340300-20340319 | MS.gene033325:CDS | 30.0% | |
| TCAAAAAAAAAAGCTGGTAG+TGG | - | chr8.2:20342602-20342621 | MS.gene033325:intron | 30.0% | |
| TCAAAATATGGCACAATACA+CGG | - | chr8.2:20342528-20342547 | MS.gene033325:intron | 30.0% | |
| TCAATAATGTTCTCGAAAAC+AGG | + | chr8.2:20340468-20340487 | None:intergenic | 30.0% | |
| TGGGAAGTTTCATCAAAATA+TGG | - | chr8.2:20342516-20342535 | MS.gene033325:intron | 30.0% | |
| TTAGAGAGTTATTGCCTTAT+TGG | - | chr8.2:20341772-20341791 | MS.gene033325:intron | 30.0% | |
| TTATTAACCTCAACATGGTA+TGG | + | chr8.2:20341247-20341266 | None:intergenic | 30.0% | |
| TTATTAGCTACCTTCAACTT+GGG | - | chr8.2:20343348-20343367 | MS.gene033325:CDS | 30.0% | |
| ! | AAAAAAAAAAGCTGGTAGTG+GGG | - | chr8.2:20342604-20342623 | MS.gene033325:intron | 30.0% |
| ! | CCAAGTCTCTTGATATTTTT+AGG | - | chr8.2:20343035-20343054 | MS.gene033325:intron | 30.0% |
| ! | CTTCATCTCTTTTTCTCTTA+GGG | + | chr8.2:20343702-20343721 | None:intergenic | 30.0% |
| ! | TAATTATTGACTACGATCGA+TGG | + | chr8.2:20343093-20343112 | None:intergenic | 30.0% |
| ! | TCTTCATCTCTTTTTCTCTT+AGG | + | chr8.2:20343703-20343722 | None:intergenic | 30.0% |
| ! | TTATTGGTTAAATTGCTGTC+GGG | + | chr8.2:20342454-20342473 | None:intergenic | 30.0% |
| !! | GTTTTCGGGAAATAATGATT+CGG | + | chr8.2:20342429-20342448 | None:intergenic | 30.0% |
| !! | TTTTCGGGAAATAATGATTC+GGG | + | chr8.2:20342428-20342447 | None:intergenic | 30.0% |
| !!! | TACCAGCTTTTTTTTTTGAG+AGG | + | chr8.2:20342601-20342620 | None:intergenic | 30.0% |
| AAAAATAGAGCCAATGGTGA+TGG | - | chr8.2:20341676-20341695 | MS.gene033325:intron | 35.0% | |
| AAAGGAAAGATGATCCCAAA+TGG | - | chr8.2:20343623-20343642 | MS.gene033325:intron | 35.0% | |
| AAATATCAAGAGACTTGGCT+AGG | + | chr8.2:20343033-20343052 | None:intergenic | 35.0% | |
| AAGGAGGTGAATAGTATAGT+GGG | - | chr8.2:20342497-20342516 | MS.gene033325:intron | 35.0% | |
| AATATCAAGAGACTTGGCTA+GGG | + | chr8.2:20343032-20343051 | None:intergenic | 35.0% | |
| AATTCTTGAAATCAGCTCTC+GGG | - | chr8.2:20342656-20342675 | MS.gene033325:CDS | 35.0% | |
| ACATGTCTGTCAATTAGTGA+AGG | - | chr8.2:20343397-20343416 | MS.gene033325:intron | 35.0% | |
| AGTTATGTCGATGACTATGA+TGG | - | chr8.2:20341749-20341768 | MS.gene033325:intron | 35.0% | |
| ATAAATGCAAATACACGCTC+GGG | - | chr8.2:20342630-20342649 | MS.gene033325:CDS | 35.0% | |
| CAAAGTTGTTTATGCGTAAC+TGG | - | chr8.2:20341034-20341053 | MS.gene033325:intron | 35.0% | |
| CACATACTTTGGTTGTTACA+CGG | + | chr8.2:20343143-20343162 | None:intergenic | 35.0% | |
| CACTAATTGACAGACATGTT+TGG | + | chr8.2:20343396-20343415 | None:intergenic | 35.0% | |
| CTCAAACAAAGATGCATCAA+AGG | - | chr8.2:20340747-20340766 | MS.gene033325:intron | 35.0% | |
| CTTGCTAGTAGTTTCCATTT+GGG | + | chr8.2:20343640-20343659 | None:intergenic | 35.0% | |
| GAGGATGAAATGGACAAATA+CGG | - | chr8.2:20340681-20340700 | MS.gene033325:intron | 35.0% | |
| GATGGTTATTTAGACATGGT+CGG | - | chr8.2:20341694-20341713 | MS.gene033325:intron | 35.0% | |
| GTCCTCTCAAAAAAAAAAGC+TGG | - | chr8.2:20342596-20342615 | MS.gene033325:intron | 35.0% | |
| GTCTAAATAACCATCACCAT+TGG | + | chr8.2:20341689-20341708 | None:intergenic | 35.0% | |
| TAAACAACTAACCTGCAAAG+AGG | + | chr8.2:20341445-20341464 | None:intergenic | 35.0% | |
| TATGCTAGCTAAGTTGCATT+AGG | + | chr8.2:20341477-20341496 | None:intergenic | 35.0% | |
| TGCAAGAATCATCAGTTTGT+TGG | + | chr8.2:20341417-20341436 | None:intergenic | 35.0% | |
| TTATGCGTAACTGGTATCTA+TGG | - | chr8.2:20341043-20341062 | MS.gene033325:intron | 35.0% | |
| TTCTTAGTGGAATACATGTG+TGG | - | chr8.2:20342365-20342384 | MS.gene033325:intron | 35.0% | |
| ! | ATTTTGCAACATGCAAGAAG+AGG | - | chr8.2:20341326-20341345 | MS.gene033325:intron | 35.0% |
| ! | CCGTTAGATTTTGTTCTTAG+TGG | - | chr8.2:20342352-20342371 | MS.gene033325:intron | 35.0% |
| ! | CTTGTATTGTGGAAAAGCAT+GGG | + | chr8.2:20342480-20342499 | None:intergenic | 35.0% |
| ! | GTGTTTGGAGCATATATGTA+CGG | - | chr8.2:20341201-20341220 | MS.gene033325:intron | 35.0% |
| ! | TTGATCTTTTCCACTGATGT+TGG | + | chr8.2:20343181-20343200 | None:intergenic | 35.0% |
| ! | TTTTGCAACATGCAAGAAGA+GGG | - | chr8.2:20341327-20341346 | MS.gene033325:intron | 35.0% |
| !! | ATGCATCTTTGTTTGAGTTG+CGG | + | chr8.2:20340744-20340763 | None:intergenic | 35.0% |
| !! | CTTATTGGTGATGATAGTGT+GGG | - | chr8.2:20341787-20341806 | MS.gene033325:intron | 35.0% |
| !! | GGAAAAGCATGGGTTTTTAT+TGG | + | chr8.2:20342470-20342489 | None:intergenic | 35.0% |
| !! | TGGTGATGGTTATTTAGACA+TGG | - | chr8.2:20341690-20341709 | MS.gene033325:intron | 35.0% |
| !! | TTAAAGGGTGTTAGTAGTTG+CGG | - | chr8.2:20341599-20341618 | MS.gene033325:intron | 35.0% |
| !!! | GGCGAGTTTTTTTTCTTTCT+TGG | - | chr8.2:20341715-20341734 | MS.gene033325:intron | 35.0% |
| AACGCGGTTCAAAAAACTGA+AGG | - | chr8.2:20340882-20340901 | MS.gene033325:intron | 40.0% | |
| AACGGCATCAAAATACAAGC+TGG | + | chr8.2:20343067-20343086 | None:intergenic | 40.0% | |
| ACGCGGTTCAAAAAACTGAA+GGG | - | chr8.2:20340883-20340902 | MS.gene033325:intron | 40.0% | |
| ACGGCATCAAAATACAAGCT+GGG | + | chr8.2:20343066-20343085 | None:intergenic | 40.0% | |
| ACGGTTAACATCAGAAAACG+TGG | - | chr8.2:20340779-20340798 | MS.gene033325:intron | 40.0% | |
| AGGATATCAAGTTCAAGCAC+AGG | + | chr8.2:20340933-20340952 | None:intergenic | 40.0% | |
| ATAAAGTCTCACCGTTGATC+AGG | - | chr8.2:20342865-20342884 | MS.gene033325:CDS | 40.0% | |
| ATGGAAACTACTAGCAAGGA+AGG | - | chr8.2:20343642-20343661 | MS.gene033325:intron | 40.0% | |
| ATGGACATGACCACATACTT+TGG | + | chr8.2:20343154-20343173 | None:intergenic | 40.0% | |
| ATTGACAGACATGTTTGGCA+TGG | + | chr8.2:20343391-20343410 | None:intergenic | 40.0% | |
| CAAGGAGGTGAATAGTATAG+TGG | - | chr8.2:20342496-20342515 | MS.gene033325:intron | 40.0% | |
| CAATTGGAGACAAACTAACC+AGG | + | chr8.2:20340353-20340372 | None:intergenic | 40.0% | |
| CCAAATGGAAACTACTAGCA+AGG | - | chr8.2:20343638-20343657 | MS.gene033325:intron | 40.0% | |
| CCACACTATCATCACCAATA+AGG | + | chr8.2:20341789-20341808 | None:intergenic | 40.0% | |
| CCTTGCTAGTAGTTTCCATT+TGG | + | chr8.2:20343641-20343660 | None:intergenic | 40.0% | |
| CCTTGTATTGTGGAAAAGCA+TGG | + | chr8.2:20342481-20342500 | None:intergenic | 40.0% | |
| CGTGTAACAACCAAAGTATG+TGG | - | chr8.2:20343141-20343160 | MS.gene033325:CDS | 40.0% | |
| CTATTCACCTCCTTGTATTG+TGG | + | chr8.2:20342491-20342510 | None:intergenic | 40.0% | |
| GCTGTGAATGAAAAATGACC+TGG | - | chr8.2:20340641-20340660 | MS.gene033325:intron | 40.0% | |
| GGAAAACATAACCTTAGCTG+AGG | + | chr8.2:20343671-20343690 | None:intergenic | 40.0% | |
| GTAGCTTCATACAACGGATA+CGG | + | chr8.2:20340848-20340867 | None:intergenic | 40.0% | |
| GTCGATGAGTGATAAAACGT+GGG | - | chr8.2:20341653-20341672 | MS.gene033325:intron | 40.0% | |
| GTTAACATCAGAAAACGTGG+TGG | - | chr8.2:20340782-20340801 | MS.gene033325:intron | 40.0% | |
| GTTATAATAACTCTCTCGCG+AGG | - | chr8.2:20342711-20342730 | MS.gene033325:CDS | 40.0% | |
| TAGCTAAGTTGCATTAGGCA+TGG | + | chr8.2:20341472-20341491 | None:intergenic | 40.0% | |
| TATAGAGGAGAGAGAAATCG+AGG | - | chr8.2:20341128-20341147 | MS.gene033325:intron | 40.0% | |
| TGAGAATGGAGCAAGAGAAA+AGG | - | chr8.2:20343605-20343624 | MS.gene033325:intron | 40.0% | |
| TGGAGCATATATGTACGGAA+GGG | - | chr8.2:20341206-20341225 | MS.gene033325:intron | 40.0% | |
| TGGTGAGTAGCTTCATACAA+CGG | + | chr8.2:20340854-20340873 | None:intergenic | 40.0% | |
| TGTCGATGAGTGATAAAACG+TGG | - | chr8.2:20341652-20341671 | MS.gene033325:intron | 40.0% | |
| TTAACTCGGTATCCGATTCA+AGG | - | chr8.2:20340385-20340404 | MS.gene033325:CDS | 40.0% | |
| TTCAAACACGCAATTGTGTG+TGG | - | chr8.2:20342986-20343005 | MS.gene033325:intron | 40.0% | |
| TTCAAGCACAGGATCATGTT+TGG | + | chr8.2:20340922-20340941 | None:intergenic | 40.0% | |
| TTCTCTCGCTGAAAATAGCA+TGG | + | chr8.2:20342301-20342320 | None:intergenic | 40.0% | |
| TTGGAGCATATATGTACGGA+AGG | - | chr8.2:20341205-20341224 | MS.gene033325:intron | 40.0% | |
| TTTGGTTGTTACACGGTAGT+GGG | + | chr8.2:20343136-20343155 | None:intergenic | 40.0% | |
| ! | AATCGTGGGATCAGATGTTT+TGG | - | chr8.2:20343742-20343761 | MS.gene033325:CDS | 40.0% |
| ! | AATTGCTGTCGGGATGTTTT+CGG | + | chr8.2:20342444-20342463 | None:intergenic | 40.0% |
| ! | CCATGCTTTTCCACAATACA+AGG | - | chr8.2:20342478-20342497 | MS.gene033325:intron | 40.0% |
| ! | TGCTTTTCCACAATACAAGG+AGG | - | chr8.2:20342481-20342500 | MS.gene033325:intron | 40.0% |
| ! | TTTTCTCTTAGGGAGAGACA+AGG | + | chr8.2:20343692-20343711 | None:intergenic | 40.0% |
| !! | CCTTATTGGTGATGATAGTG+TGG | - | chr8.2:20341786-20341805 | MS.gene033325:intron | 40.0% |
| !! | GCATCAAAGGTCTTGTTCAA+CGG | - | chr8.2:20340760-20340779 | MS.gene033325:intron | 40.0% |
| !!! | AGCTTGTATTTTGATGCCGT+TGG | - | chr8.2:20343066-20343085 | MS.gene033325:intron | 40.0% |
| !!! | CCTGGTTTTTTACAGTTGCA+CGG | - | chr8.2:20340659-20340678 | MS.gene033325:intron | 40.0% |
| !!! | GTCATTTTTCATTCACAGCG+CGG | + | chr8.2:20340640-20340659 | None:intergenic | 40.0% |
| AACATGCAAGAAGAGGGTGA+AGG | - | chr8.2:20341333-20341352 | MS.gene033325:intron | 45.0% | |
| AACATGGTATGGTCCAACGT+CGG | + | chr8.2:20341236-20341255 | None:intergenic | 45.0% | |
| AACTAACCAGGATGCTTGTG+TGG | + | chr8.2:20340341-20340360 | None:intergenic | 45.0% | |
| ACACGGAACCACATGATGAT+GGG | - | chr8.2:20342545-20342564 | MS.gene033325:intron | 45.0% | |
| ACATGCAAGAAGAGGGTGAA+GGG | - | chr8.2:20341334-20341353 | MS.gene033325:intron | 45.0% | |
| ACCTAACTCCCATCATCATG+TGG | + | chr8.2:20342556-20342575 | None:intergenic | 45.0% | |
| ACTAACCAGGATGCTTGTGT+GGG | + | chr8.2:20340340-20340359 | None:intergenic | 45.0% | |
| ACTCACCAATCACTTCAACG+CGG | - | chr8.2:20340866-20340885 | MS.gene033325:intron | 45.0% | |
| ACTTGATATCCTCCGCTTCA+TGG | - | chr8.2:20340941-20340960 | MS.gene033325:intron | 45.0% | |
| AGAGTGACCATAGACAATCG+TGG | - | chr8.2:20343727-20343746 | MS.gene033325:CDS | 45.0% | |
| AGCAAATTCTCCACCTGTCA+AGG | - | chr8.2:20341283-20341302 | MS.gene033325:intron | 45.0% | |
| ATACAACGGATACGGAGATC+CGG | + | chr8.2:20340840-20340859 | None:intergenic | 45.0% | |
| CAAATACGGAATCCACCTGT+TGG | - | chr8.2:20340695-20340714 | MS.gene033325:intron | 45.0% | |
| CCGTGCAACTGTAAAAAACC+AGG | + | chr8.2:20340662-20340681 | None:intergenic | 45.0% | |
| CGGTTCAAAAAACTGAAGGG+TGG | - | chr8.2:20340886-20340905 | MS.gene033325:intron | 45.0% | |
| CGTGGGAAAAATAGAGCCAA+TGG | - | chr8.2:20341670-20341689 | MS.gene033325:intron | 45.0% | |
| CTACAAACCTGGATGAGTAG+AGG | + | chr8.2:20340575-20340594 | None:intergenic | 45.0% | |
| CTTGCAATGTTCCTCTTTGC+AGG | - | chr8.2:20341431-20341450 | MS.gene033325:intron | 45.0% | |
| CTTTGGTTGTTACACGGTAG+TGG | + | chr8.2:20343137-20343156 | None:intergenic | 45.0% | |
| GAATACCCAAACCACACCAA+TGG | - | chr8.2:20340254-20340273 | MS.gene033325:CDS | 45.0% | |
| GAGTGACCATAGACAATCGT+GGG | - | chr8.2:20343728-20343747 | MS.gene033325:CDS | 45.0% | |
| GCAAATTCTCCACCTGTCAA+GGG | - | chr8.2:20341284-20341303 | MS.gene033325:intron | 45.0% | |
| GTTGTATGCGGAACTTTCTG+AGG | - | chr8.2:20341171-20341190 | MS.gene033325:intron | 45.0% | |
| TACACGGAACCACATGATGA+TGG | - | chr8.2:20342544-20342563 | MS.gene033325:intron | 45.0% | |
| TACCTTCAACTTGGGAAGCA+TGG | - | chr8.2:20343356-20343375 | MS.gene033325:CDS | 45.0% | |
| TCTGATCCCACGATTGTCTA+TGG | + | chr8.2:20343737-20343756 | None:intergenic | 45.0% | |
| TTGAACCGCGTTGAAGTGAT+TGG | + | chr8.2:20340874-20340893 | None:intergenic | 45.0% | |
| TTTCGCTTTCGTCCATGAAG+CGG | + | chr8.2:20340956-20340975 | None:intergenic | 45.0% | |
| ! | AACCATGCTTCCCAAGTTGA+AGG | + | chr8.2:20343361-20343380 | None:intergenic | 45.0% |
| ! | ATTGCTGTCGGGATGTTTTC+GGG | + | chr8.2:20342443-20342462 | None:intergenic | 45.0% |
| ! | GAAATCGAGGAAGCATAGAG+AGG | - | chr8.2:20341141-20341160 | MS.gene033325:intron | 45.0% |
| !! | ACATGATGATGGGAGTTAGG+TGG | - | chr8.2:20342555-20342574 | MS.gene033325:intron | 45.0% |
| !! | ACCACATGATGATGGGAGTT+AGG | - | chr8.2:20342552-20342571 | MS.gene033325:intron | 45.0% |
| !! | ATTGGTGATGATAGTGTGGG+TGG | - | chr8.2:20341790-20341809 | MS.gene033325:intron | 45.0% |
| !! | CAGGTGGAGAATTTGCTACA+CGG | + | chr8.2:20341280-20341299 | None:intergenic | 45.0% |
| !! | TTCCACTGATGTTGGTGTCA+TGG | + | chr8.2:20343173-20343192 | None:intergenic | 45.0% |
| !!! | GGTTTTTTACAGTTGCACGG+AGG | - | chr8.2:20340662-20340681 | MS.gene033325:intron | 45.0% |
| AAGGAAGGTTGCCTCAGCTA+AGG | - | chr8.2:20343657-20343676 | MS.gene033325:intron | 50.0% | |
| AATGGATGCCGTGAGTGTGT+TGG | + | chr8.2:20342214-20342233 | None:intergenic | 50.0% | |
| ACACGTGAGATAGTGCCAAC+AGG | + | chr8.2:20340713-20340732 | None:intergenic | 50.0% | |
| AGAGGAGCAAGGGTTGTATG+CGG | - | chr8.2:20341159-20341178 | MS.gene033325:intron | 50.0% | |
| AGGTGGAATTCAGCTGGTAG+TGG | - | chr8.2:20342572-20342591 | MS.gene033325:intron | 50.0% | |
| CAGTTGCACGGAGGATGAAA+TGG | - | chr8.2:20340671-20340690 | MS.gene033325:intron | 50.0% | |
| CGTTGGACCATACCATGTTG+AGG | - | chr8.2:20341237-20341256 | MS.gene033325:intron | 50.0% | |
| CTCGAAAACAGGAGATACCG+AGG | + | chr8.2:20340457-20340476 | None:intergenic | 50.0% | |
| GACCTCCATTGGTGTGGTTT+GGG | + | chr8.2:20340262-20340281 | None:intergenic | 50.0% | |
| GACTACGATCGATGGACCAA+CGG | + | chr8.2:20343085-20343104 | None:intergenic | 50.0% | |
| GGAGTTAGGTGGAATTCAGC+TGG | - | chr8.2:20342566-20342585 | MS.gene033325:intron | 50.0% | |
| GGTGGAATTCAGCTGGTAGT+GGG | - | chr8.2:20342573-20342592 | MS.gene033325:intron | 50.0% | |
| GTAGAGGTAGCCGATGAAAG+CGG | + | chr8.2:20340559-20340578 | None:intergenic | 50.0% | |
| GTAGCCGATGAAAGCGGTTA+CGG | + | chr8.2:20340553-20340572 | None:intergenic | 50.0% | |
| GTCCATGACACCAACATCAG+TGG | - | chr8.2:20343168-20343187 | MS.gene033325:CDS | 50.0% | |
| TAACTCTCTCGCGAGGTTGT+CGG | - | chr8.2:20342718-20342737 | MS.gene033325:CDS | 50.0% | |
| TAAGACGACCTCCATTGGTG+TGG | + | chr8.2:20340268-20340287 | None:intergenic | 50.0% | |
| TACCCAAACCACACCAATGG+AGG | - | chr8.2:20340257-20340276 | MS.gene033325:CDS | 50.0% | |
| TGGAAGGAACGCCGTGAATT+TGG | + | chr8.2:20340527-20340546 | None:intergenic | 50.0% | |
| TGGTCACACCAACACACTCA+CGG | - | chr8.2:20342203-20342222 | MS.gene033325:intron | 50.0% | |
| ! | AGGAAGCATAGAGAGGAGCA+AGG | - | chr8.2:20341148-20341167 | MS.gene033325:intron | 50.0% |
| ! | ATGATAGTGTGGGTGGTGGT+CGG | - | chr8.2:20341797-20341816 | MS.gene033325:intron | 50.0% |
| ! | CACACTCACGGCATCCATTT+TGG | - | chr8.2:20342215-20342234 | MS.gene033325:intron | 50.0% |
| ! | GCACAGGATCATGTTTGGTG+AGG | + | chr8.2:20340917-20340936 | None:intergenic | 50.0% |
| ! | GGAAGCATAGAGAGGAGCAA+GGG | - | chr8.2:20341149-20341168 | MS.gene033325:intron | 50.0% |
| ! | GTGGAATTCAGCTGGTAGTG+GGG | - | chr8.2:20342574-20342593 | MS.gene033325:intron | 50.0% |
| !! | TTCTGAGGCGATGGAGTGTT+TGG | - | chr8.2:20341186-20341205 | MS.gene033325:intron | 50.0% |
| AACTCTCTCGCGAGGTTGTC+GGG | - | chr8.2:20342719-20342738 | MS.gene033325:CDS | 55.0% | |
| AAGCTGAAGCCCTTGACAGG+TGG | + | chr8.2:20341296-20341315 | None:intergenic | 55.0% | |
| ACCGCCGTAACCGCTTTCAT+CGG | - | chr8.2:20340546-20340565 | MS.gene033325:intron | 55.0% | |
| CAGAAGCTGAAGCCCTTGAC+AGG | + | chr8.2:20341299-20341318 | None:intergenic | 55.0% | |
| CGACCTCCATTGGTGTGGTT+TGG | + | chr8.2:20340263-20340282 | None:intergenic | 55.0% | |
| CGTGAGATAGTGCCAACAGG+TGG | + | chr8.2:20340710-20340729 | None:intergenic | 55.0% | |
| TCGGAGCTGCGTTGTTTACG+CGG | + | chr8.2:20340495-20340514 | None:intergenic | 55.0% | |
| TCGGCTACCTCTACTCATCC+AGG | - | chr8.2:20340565-20340584 | MS.gene033325:intron | 55.0% | |
| TCGGGTAAGACGACCTCCAT+TGG | + | chr8.2:20340273-20340292 | None:intergenic | 55.0% | |
| TGCAAGAAGAGGGTGAAGGG+AGG | - | chr8.2:20341337-20341356 | MS.gene033325:intron | 55.0% | |
| TGGATGTACTCCAACTCGCC+AGG | - | chr8.2:20340802-20340821 | MS.gene033325:intron | 55.0% | |
| ! | GCTGGAGGTGCAAACGTATG+TGG | - | chr8.2:20341362-20341381 | MS.gene033325:intron | 55.0% |
| ! | GGTGATGATAGTGTGGGTGG+TGG | - | chr8.2:20341793-20341812 | MS.gene033325:intron | 55.0% |
| !! | TGCGGAACTTTCTGAGGCGA+TGG | - | chr8.2:20341177-20341196 | MS.gene033325:intron | 55.0% |
| AAAGCGGTTACGGCGGTGGA+AGG | + | chr8.2:20340543-20340562 | None:intergenic | 60.0% | |
| ACCAGGATGCTTGTGTGGGC+TGG | + | chr8.2:20340336-20340355 | None:intergenic | 60.0% | |
| CGCTTTCGTCCATGAAGCGG+AGG | + | chr8.2:20340953-20340972 | None:intergenic | 60.0% | |
| GATGAAAGCGGTTACGGCGG+TGG | + | chr8.2:20340547-20340566 | None:intergenic | 60.0% | |
| GCCGATGAAAGCGGTTACGG+CGG | + | chr8.2:20340550-20340569 | None:intergenic | 60.0% | |
| TCCAGCCCACACAAGCATCC+TGG | - | chr8.2:20340332-20340351 | MS.gene033325:CDS | 60.0% | |
| AGAGGGTGAAGGGAGGCTGC+TGG | - | chr8.2:20341344-20341363 | MS.gene033325:intron | 65.0% | |
| ATCCGGTGCATCGCAGAGCC+TGG | + | chr8.2:20340823-20340842 | None:intergenic | 65.0% | |
| CATCGCAGAGCCTGGCGAGT+TGG | + | chr8.2:20340815-20340834 | None:intergenic | 65.0% | |
| ! | ACGGAAGGGTGCACCGACGT+TGG | - | chr8.2:20341220-20341239 | MS.gene033325:intron | 65.0% |
| CGCCAGGCTCTGCGATGCAC+CGG | - | chr8.2:20340818-20340837 | MS.gene033325:intron | 70.0% | |
| GGGTGAAGGGAGGCTGCTGG+AGG | - | chr8.2:20341347-20341366 | MS.gene033325:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 20340246 | 20343819 | 20340246 | ID=MS.gene033325 |
| chr8.2 | mRNA | 20340246 | 20343819 | 20340246 | ID=MS.gene033325.t1;Parent=MS.gene033325 |
| chr8.2 | exon | 20343712 | 20343819 | 20343712 | ID=MS.gene033325.t1.exon1;Parent=MS.gene033325.t1 |
| chr8.2 | CDS | 20343712 | 20343819 | 20343712 | ID=cds.MS.gene033325.t1;Parent=MS.gene033325.t1 |
| chr8.2 | exon | 20343479 | 20343612 | 20343479 | ID=MS.gene033325.t1.exon2;Parent=MS.gene033325.t1 |
| chr8.2 | CDS | 20343479 | 20343612 | 20343479 | ID=cds.MS.gene033325.t1;Parent=MS.gene033325.t1 |
| chr8.2 | exon | 20343088 | 20343391 | 20343088 | ID=MS.gene033325.t1.exon3;Parent=MS.gene033325.t1 |
| chr8.2 | CDS | 20343088 | 20343391 | 20343088 | ID=cds.MS.gene033325.t1;Parent=MS.gene033325.t1 |
| chr8.2 | exon | 20342613 | 20342932 | 20342613 | ID=MS.gene033325.t1.exon4;Parent=MS.gene033325.t1 |
| chr8.2 | CDS | 20342613 | 20342932 | 20342613 | ID=cds.MS.gene033325.t1;Parent=MS.gene033325.t1 |
| chr8.2 | exon | 20340246 | 20340471 | 20340246 | ID=MS.gene033325.t1.exon5;Parent=MS.gene033325.t1 |
| chr8.2 | CDS | 20340246 | 20340471 | 20340246 | ID=cds.MS.gene033325.t1;Parent=MS.gene033325.t1 |
| Gene Sequence |
| Protein sequence |
