Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033820.t1 | XP_003595580.2 | 66.2 | 420 | 51 | 9 | 1 | 379 | 1 | 370 | 6.90E-134 | 487.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033820.t1 | Q2HRQ4 | 66.2 | 420 | 51 | 9 | 1 | 379 | 1 | 370 | 5.0e-134 | 487.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene033820.t1 | TF | MADS-M-type |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033820.t1 | MTR_2g049630 | 66.190 | 420 | 51 | 9 | 1 | 379 | 1 | 370 | 1.27e-179 | 504 |
| MS.gene033820.t1 | MTR_2g049530 | 71.429 | 175 | 48 | 1 | 1 | 175 | 1 | 173 | 2.89e-84 | 255 |
| MS.gene033820.t1 | MTR_2g049610 | 58.468 | 248 | 75 | 6 | 4 | 250 | 2 | 222 | 7.82e-84 | 256 |
| MS.gene033820.t1 | MTR_4g107170 | 42.857 | 245 | 123 | 8 | 1 | 242 | 1 | 231 | 2.43e-49 | 167 |
| MS.gene033820.t1 | MTR_4g045977 | 32.093 | 430 | 209 | 18 | 4 | 387 | 2 | 394 | 7.17e-44 | 157 |
| MS.gene033820.t1 | MTR_1g115290 | 47.586 | 145 | 63 | 3 | 40 | 174 | 2 | 143 | 3.82e-33 | 122 |
| MS.gene033820.t1 | MTR_6g018920 | 37.821 | 156 | 90 | 2 | 4 | 155 | 2 | 154 | 1.01e-29 | 118 |
| MS.gene033820.t1 | MTR_6g005440 | 33.333 | 180 | 108 | 3 | 4 | 179 | 2 | 173 | 3.03e-28 | 113 |
| MS.gene033820.t1 | MTR_1g114730 | 37.821 | 156 | 90 | 2 | 4 | 155 | 2 | 154 | 3.28e-28 | 114 |
| MS.gene033820.t1 | MTR_6g005450 | 32.973 | 185 | 104 | 3 | 4 | 171 | 2 | 183 | 9.66e-25 | 104 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033820.t1 | AT5G58890 | 26.471 | 204 | 134 | 5 | 10 | 204 | 8 | 204 | 2.86e-11 | 64.3 |
Find 75 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTGAAGGTGTGGAGTTTA+AGG | 0.200238 | 2.3:-41722128 | MS.gene033820:CDS |
| TCCACTGGCACTAACCAATT+TGG | 0.223800 | 2.3:-41722490 | MS.gene033820:CDS |
| AGATTCAAGCTTGCAATAAA+AGG | 0.235091 | 2.3:-41722678 | MS.gene033820:CDS |
| ACTTCACAAATTCACCAAAT+TGG | 0.235452 | 2.3:+41722476 | None:intergenic |
| CAATCAGAGAAACAATAATT+TGG | 0.236694 | 2.3:-41723040 | MS.gene033820:CDS |
| ATGAGTAACAATCCAGATTT+TGG | 0.240718 | 2.3:-41721860 | MS.gene033820:CDS |
| AAGTGATGAAACTAGTTTCT+TGG | 0.301809 | 2.3:-41722629 | MS.gene033820:CDS |
| CATCATGCATGCCCTCAAAT+TGG | 0.311938 | 2.3:+41722230 | None:intergenic |
| CACAATCTCTTTGTGCACTT+TGG | 0.338528 | 2.3:+41722786 | None:intergenic |
| ATTCTAACAGAAGAGTTAAA+AGG | 0.339516 | 2.3:+41722526 | None:intergenic |
| TTAGATATATATTGCCTTTG+AGG | 0.360079 | 2.3:+41722598 | None:intergenic |
| TTGTCAGTACGGCCAAAATC+TGG | 0.361644 | 2.3:+41721848 | None:intergenic |
| GAATGGCTTGCTAAACTTGA+TGG | 0.371537 | 2.3:-41722364 | MS.gene033820:CDS |
| ACTTTCATTGGCATTCTAGA+TGG | 0.373255 | 2.3:-41722703 | MS.gene033820:CDS |
| CACTTTGGAAATCTCAGCTT+CGG | 0.379162 | 2.3:+41722801 | None:intergenic |
| GAACAACTCAAAACTTTCAT+TGG | 0.388952 | 2.3:-41722715 | MS.gene033820:CDS |
| CTTGCTAAACTTGATGGAAT+TGG | 0.393389 | 2.3:-41722358 | MS.gene033820:CDS |
| TTAGCAAGCCATTCATGAAC+AGG | 0.402628 | 2.3:+41722373 | None:intergenic |
| GAAACAGGAGGCAAACTAAC+AGG | 0.403384 | 2.3:+41722166 | None:intergenic |
| TTGATTGTATATGATGGTTA+TGG | 0.415733 | 2.3:-41722970 | MS.gene033820:CDS |
| AATGGCTGAACCTGGAGAAT+TGG | 0.416289 | 2.3:-41722101 | MS.gene033820:CDS |
| TTCAAATTCAAACCAATTTG+AGG | 0.423199 | 2.3:-41722242 | MS.gene033820:CDS |
| GAATCTTGTGGCGTAGTCAT+TGG | 0.433592 | 2.3:+41722937 | None:intergenic |
| ATTTGGTGAATTTGTGAAGT+TGG | 0.438819 | 2.3:-41722473 | MS.gene033820:CDS |
| ACTTGATGGAATTGGTGAAA+TGG | 0.440564 | 2.3:-41722350 | MS.gene033820:CDS |
| TCAAATTGGTTTGAATTTGA+AGG | 0.443439 | 2.3:+41722244 | None:intergenic |
| CTTCCCATGTTCATGAAGCA+TGG | 0.443974 | 2.3:+41722739 | None:intergenic |
| TCAAATTCAAACCAATTTGA+GGG | 0.445030 | 2.3:-41722241 | MS.gene033820:CDS |
| AGTTGGTTAGTCGACGAAAC+AGG | 0.451962 | 2.3:+41722151 | None:intergenic |
| TGAAGAACAAGATGCAACTT+TGG | 0.454553 | 2.3:-41721891 | MS.gene033820:CDS |
| TGTGGAGTTTAAGGATCTAA+TGG | 0.457159 | 2.3:-41722119 | MS.gene033820:CDS |
| GAGAATTGGCTGATCAAGAA+TGG | 0.477671 | 2.3:-41722087 | MS.gene033820:CDS |
| TCTTGATCAGCCAATTCTCC+AGG | 0.485314 | 2.3:+41722091 | None:intergenic |
| CAAATTGGTTTGAATTTGAA+GGG | 0.485473 | 2.3:+41722245 | None:intergenic |
| ATGAAGCATGGGTGCCAAGT+TGG | 0.489072 | 2.3:+41722751 | None:intergenic |
| TGTGAAGTTGGATGATGTAA+TGG | 0.498245 | 2.3:-41722461 | MS.gene033820:CDS |
| GCACCCATGCTTCATGAACA+TGG | 0.501370 | 2.3:-41722743 | MS.gene033820:CDS |
| TGGGCAAACCTGTTCATGAA+TGG | 0.501856 | 2.3:-41722381 | MS.gene033820:CDS |
| TTCCCATGTTCATGAAGCAT+GGG | 0.515611 | 2.3:+41722740 | None:intergenic |
| TACAAAGATCTTTGATGTGA+AGG | 0.515872 | 2.3:-41722851 | MS.gene033820:CDS |
| CAATTTGAGGGCATGCATGA+TGG | 0.516426 | 2.3:-41722229 | MS.gene033820:CDS |
| ACCAAATTGGTTAGTGCCAG+TGG | 0.517469 | 2.3:+41722489 | None:intergenic |
| TATGAGCAACAAAAGATTGA+GGG | 0.532792 | 2.3:-41722886 | MS.gene033820:CDS |
| GCTTGCTTGATTGTATATGA+TGG | 0.536036 | 2.3:-41722976 | MS.gene033820:CDS |
| GACTTCAAAGGATCATAGAT+AGG | 0.536260 | 2.3:+41722190 | None:intergenic |
| ATATGAGCAACAAAAGATTG+AGG | 0.539428 | 2.3:-41722887 | MS.gene033820:CDS |
| ACTCCACACCTTCACCAAGT+TGG | 0.544036 | 2.3:+41722134 | None:intergenic |
| AGAGAATGGACTGGTCAACT+TGG | 0.545153 | 2.3:-41722430 | MS.gene033820:CDS |
| CACTGCTCACACACAACGCA+TGG | 0.545176 | 2.3:-41722275 | MS.gene033820:CDS |
| TAATGGCTGAACCTAGAGAA+TGG | 0.545403 | 2.3:-41722444 | MS.gene033820:CDS |
| ACAAGATGCAACTTTGGAGG+AGG | 0.548981 | 2.3:-41721885 | MS.gene033820:CDS |
| AGTTGACCAGTCCATTCTCT+AGG | 0.550305 | 2.3:+41722433 | None:intergenic |
| AAGGATCTAATGGCTGAACC+TGG | 0.553969 | 2.3:-41722109 | MS.gene033820:CDS |
| GCAGAAATGGGTCGTGCTCG+TGG | 0.560131 | 2.3:-41723114 | None:intergenic |
| CATGCTTCATGAACATGGGA+AGG | 0.577684 | 2.3:-41722738 | MS.gene033820:CDS |
| AGAACAAGATGCAACTTTGG+AGG | 0.581299 | 2.3:-41721888 | MS.gene033820:CDS |
| GTATATGATGGTTATGGTGA+TGG | 0.584410 | 2.3:-41722964 | MS.gene033820:CDS |
| TCACACACAACGCATGGCTA+AGG | 0.591731 | 2.3:-41722269 | MS.gene033820:CDS |
| CAAGATGCAACTTTGGAGGA+GGG | 0.596589 | 2.3:-41721884 | MS.gene033820:CDS |
| TCTTGGATAGCATTCCTCAA+AGG | 0.601149 | 2.3:-41722612 | MS.gene033820:CDS |
| ACATAGAAGATGATAGAGCT+CGG | 0.603472 | 2.3:-41723074 | MS.gene033820:CDS |
| CACCCATGCTTCATGAACAT+GGG | 0.606783 | 2.3:-41722742 | MS.gene033820:CDS |
| GTTTCGTCGACTAACCAACT+TGG | 0.615554 | 2.3:-41722148 | MS.gene033820:CDS |
| CACAAGATTCGACAATTGTA+CGG | 0.618314 | 2.3:-41722924 | MS.gene033820:CDS |
| TGATGAAAATGTATCCAACT+TGG | 0.619935 | 2.3:-41722765 | MS.gene033820:CDS |
| TAACCAACTTGGTGAAGGTG+TGG | 0.620796 | 2.3:-41722137 | MS.gene033820:CDS |
| CGTACAATTGTCGAATCTTG+TGG | 0.622061 | 2.3:+41722925 | None:intergenic |
| AAGATGCAACTTTGGAGGAG+GGG | 0.626040 | 2.3:-41721883 | MS.gene033820:CDS |
| GCTGAACCTAGAGAATGGAC+TGG | 0.629743 | 2.3:-41722439 | MS.gene033820:CDS |
| TCGACTAACCAACTTGGTGA+AGG | 0.633986 | 2.3:-41722142 | MS.gene033820:CDS |
| AAACTAACAGGAGACTTCAA+AGG | 0.635174 | 2.3:+41722178 | None:intergenic |
| TGGTCAACTTGGTGAACATG+AGG | 0.636156 | 2.3:-41722419 | MS.gene033820:CDS |
| ATGCTTCATGAACATGGGAA+GGG | 0.648556 | 2.3:-41722737 | MS.gene033820:CDS |
| GTGCCAGTGGACAAAACATG+AGG | 0.672995 | 2.3:+41722502 | None:intergenic |
| TGGTTAGTCGACGAAACAGG+AGG | 0.703043 | 2.3:+41722154 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCTGATTTTTCTAAAAAGTT+TGG | - | chr2.3:41721934-41721953 | MS.gene033820:intron | 20.0% |
| ! | ATTCTAACAGAAGAGTTAAA+AGG | + | chr2.3:41722417-41722436 | None:intergenic | 25.0% |
| ! | CAATCAGAGAAACAATAATT+TGG | - | chr2.3:41721900-41721919 | MS.gene033820:CDS | 25.0% |
| ! | TCAAATTCAAACCAATTTGA+GGG | - | chr2.3:41722699-41722718 | MS.gene033820:CDS | 25.0% |
| ! | TTAGATATATATTGCCTTTG+AGG | + | chr2.3:41722345-41722364 | None:intergenic | 25.0% |
| ! | TTCAAATTCAAACCAATTTG+AGG | - | chr2.3:41722698-41722717 | MS.gene033820:CDS | 25.0% |
| ! | TTGATTGTATATGATGGTTA+TGG | - | chr2.3:41721970-41721989 | MS.gene033820:intron | 25.0% |
| !! | TTTTGCAAACAAGATAAAGA+AGG | - | chr2.3:41722116-41722135 | MS.gene033820:CDS | 25.0% |
| !!! | CAAATTGGTTTGAATTTGAA+GGG | + | chr2.3:41722698-41722717 | None:intergenic | 25.0% |
| !!! | TCAAATTGGTTTGAATTTGA+AGG | + | chr2.3:41722699-41722718 | None:intergenic | 25.0% |
| ACTTCACAAATTCACCAAAT+TGG | + | chr2.3:41722467-41722486 | None:intergenic | 30.0% | |
| AGATTCAAGCTTGCAATAAA+AGG | - | chr2.3:41722262-41722281 | MS.gene033820:CDS | 30.0% | |
| ATATGAGCAACAAAAGATTG+AGG | - | chr2.3:41722053-41722072 | MS.gene033820:CDS | 30.0% | |
| GAACAACTCAAAACTTTCAT+TGG | - | chr2.3:41722225-41722244 | MS.gene033820:CDS | 30.0% | |
| TACAAAGATCTTTGATGTGA+AGG | - | chr2.3:41722089-41722108 | MS.gene033820:CDS | 30.0% | |
| TATGAGCAACAAAAGATTGA+GGG | - | chr2.3:41722054-41722073 | MS.gene033820:CDS | 30.0% | |
| TGATGAAAATGTATCCAACT+TGG | - | chr2.3:41722175-41722194 | MS.gene033820:CDS | 30.0% | |
| ! | AAGTGATGAAACTAGTTTCT+TGG | - | chr2.3:41722311-41722330 | MS.gene033820:CDS | 30.0% |
| ! | ATGAGTAACAATCCAGATTT+TGG | - | chr2.3:41723080-41723099 | MS.gene033820:CDS | 30.0% |
| ! | ATGATGATGATACTATGAAG+TGG | - | chr2.3:41722937-41722956 | MS.gene033820:CDS | 30.0% |
| ! | ATTTGGTGAATTTGTGAAGT+TGG | - | chr2.3:41722467-41722486 | MS.gene033820:CDS | 30.0% |
| ! | GAGGAGTTGAATAATTTTGT+GGG | - | chr2.3:41722540-41722559 | MS.gene033820:CDS | 30.0% |
| ! | TGAGGAGTTGAATAATTTTG+TGG | - | chr2.3:41722539-41722558 | MS.gene033820:CDS | 30.0% |
| !!! | TTGCTCATATTTTTCAAGCA+TGG | + | chr2.3:41722043-41722062 | None:intergenic | 30.0% |
| AAACTAACAGGAGACTTCAA+AGG | + | chr2.3:41722765-41722784 | None:intergenic | 35.0% | |
| ACATAGAAGATGATAGAGCT+CGG | - | chr2.3:41721866-41721885 | MS.gene033820:CDS | 35.0% | |
| ACTTGATGGAATTGGTGAAA+TGG | - | chr2.3:41722590-41722609 | MS.gene033820:CDS | 35.0% | |
| ACTTTCATTGGCATTCTAGA+TGG | - | chr2.3:41722237-41722256 | MS.gene033820:CDS | 35.0% | |
| CACAAGATTCGACAATTGTA+CGG | - | chr2.3:41722016-41722035 | MS.gene033820:intron | 35.0% | |
| CTTGCTAAACTTGATGGAAT+TGG | - | chr2.3:41722582-41722601 | MS.gene033820:CDS | 35.0% | |
| GACTTCAAAGGATCATAGAT+AGG | + | chr2.3:41722753-41722772 | None:intergenic | 35.0% | |
| GCTTGCTTGATTGTATATGA+TGG | - | chr2.3:41721964-41721983 | MS.gene033820:intron | 35.0% | |
| GTATATGATGGTTATGGTGA+TGG | - | chr2.3:41721976-41721995 | MS.gene033820:intron | 35.0% | |
| TGAAGAACAAGATGCAACTT+TGG | - | chr2.3:41723049-41723068 | MS.gene033820:CDS | 35.0% | |
| TGTGAAGTTGGATGATGTAA+TGG | - | chr2.3:41722479-41722498 | MS.gene033820:CDS | 35.0% | |
| TGTGGAGTTTAAGGATCTAA+TGG | - | chr2.3:41722821-41722840 | MS.gene033820:CDS | 35.0% | |
| ! | TCACCATCATCTAGTTTACT+AGG | + | chr2.3:41722918-41722937 | None:intergenic | 35.0% |
| ! | TGCATGATGGCTTTTATCAA+TGG | - | chr2.3:41722724-41722743 | MS.gene033820:CDS | 35.0% |
| AGAACAAGATGCAACTTTGG+AGG | - | chr2.3:41723052-41723071 | MS.gene033820:CDS | 40.0% | |
| ATGCTTCATGAACATGGGAA+GGG | - | chr2.3:41722203-41722222 | MS.gene033820:CDS | 40.0% | |
| CACAATCTCTTTGTGCACTT+TGG | + | chr2.3:41722157-41722176 | None:intergenic | 40.0% | |
| CGTACAATTGTCGAATCTTG+TGG | + | chr2.3:41722018-41722037 | None:intergenic | 40.0% | |
| GAGAATTGGCTGATCAAGAA+TGG | - | chr2.3:41722853-41722872 | MS.gene033820:CDS | 40.0% | |
| GCTCCTAGTAAACTAGATGA+TGG | - | chr2.3:41722912-41722931 | MS.gene033820:CDS | 40.0% | |
| GTCAAGATGATGTGTTTGCA+TGG | - | chr2.3:41723000-41723019 | MS.gene033820:CDS | 40.0% | |
| TAATGGCTGAACCTAGAGAA+TGG | - | chr2.3:41722496-41722515 | MS.gene033820:CDS | 40.0% | |
| TCTTGGATAGCATTCCTCAA+AGG | - | chr2.3:41722328-41722347 | MS.gene033820:CDS | 40.0% | |
| TTAGCAAGCCATTCATGAAC+AGG | + | chr2.3:41722570-41722589 | None:intergenic | 40.0% | |
| TTCATCACCTTCATCTTGAC+TGG | + | chr2.3:41722964-41722983 | None:intergenic | 40.0% | |
| TTCCCATGTTCATGAAGCAT+GGG | + | chr2.3:41722203-41722222 | None:intergenic | 40.0% | |
| ! | CACTTTGGAAATCTCAGCTT+CGG | + | chr2.3:41722142-41722161 | None:intergenic | 40.0% |
| !! | GAATGGCTTGCTAAACTTGA+TGG | - | chr2.3:41722576-41722595 | MS.gene033820:CDS | 40.0% |
| !! | GGAAGAGAGTTTTGTCAGTA+CGG | + | chr2.3:41723106-41723125 | None:intergenic | 40.0% |
| AAGGATCTAATGGCTGAACC+TGG | - | chr2.3:41722831-41722850 | MS.gene033820:CDS | 45.0% | |
| AAGTGGACCAGTCAAGATGA+AGG | - | chr2.3:41722954-41722973 | MS.gene033820:CDS | 45.0% | |
| AATGGCTGAACCTGGAGAAT+TGG | - | chr2.3:41722839-41722858 | MS.gene033820:CDS | 45.0% | |
| ACCAAATTGGTTAGTGCCAG+TGG | + | chr2.3:41722454-41722473 | None:intergenic | 45.0% | |
| AGTTGACCAGTCCATTCTCT+AGG | + | chr2.3:41722510-41722529 | None:intergenic | 45.0% | |
| CACCCATGCTTCATGAACAT+GGG | - | chr2.3:41722198-41722217 | MS.gene033820:CDS | 45.0% | |
| CATCATGCATGCCCTCAAAT+TGG | + | chr2.3:41722713-41722732 | None:intergenic | 45.0% | |
| CATGCTTCATGAACATGGGA+AGG | - | chr2.3:41722202-41722221 | MS.gene033820:CDS | 45.0% | |
| CTTCCCATGTTCATGAAGCA+TGG | + | chr2.3:41722204-41722223 | None:intergenic | 45.0% | |
| GAAACAGGAGGCAAACTAAC+AGG | + | chr2.3:41722777-41722796 | None:intergenic | 45.0% | |
| GAATCTTGTGGCGTAGTCAT+TGG | + | chr2.3:41722006-41722025 | None:intergenic | 45.0% | |
| TCCACTGGCACTAACCAATT+TGG | - | chr2.3:41722450-41722469 | MS.gene033820:CDS | 45.0% | |
| TCTTGATCAGCCAATTCTCC+AGG | + | chr2.3:41722852-41722871 | None:intergenic | 45.0% | |
| TGGGCAAACCTGTTCATGAA+TGG | - | chr2.3:41722559-41722578 | MS.gene033820:CDS | 45.0% | |
| TTGTCAGTACGGCCAAAATC+TGG | + | chr2.3:41723095-41723114 | None:intergenic | 45.0% | |
| ! | AAGATGCAACTTTGGAGGAG+GGG | - | chr2.3:41723057-41723076 | MS.gene033820:CDS | 45.0% |
| ! | ACAAGATGCAACTTTGGAGG+AGG | - | chr2.3:41723055-41723074 | MS.gene033820:CDS | 45.0% |
| ! | AGTTGGTTAGTCGACGAAAC+AGG | + | chr2.3:41722792-41722811 | None:intergenic | 45.0% |
| ! | ATGCCTCATGTTTTGTCCAC+TGG | - | chr2.3:41722435-41722454 | MS.gene033820:CDS | 45.0% |
| ! | CAAGATGCAACTTTGGAGGA+GGG | - | chr2.3:41723056-41723075 | MS.gene033820:CDS | 45.0% |
| ! | CAATTTGAGGGCATGCATGA+TGG | - | chr2.3:41722711-41722730 | MS.gene033820:CDS | 45.0% |
| ! | GTTTCGTCGACTAACCAACT+TGG | - | chr2.3:41722792-41722811 | MS.gene033820:CDS | 45.0% |
| ! | TAACCAACTTGGTGAAGGTG+TGG | - | chr2.3:41722803-41722822 | MS.gene033820:CDS | 45.0% |
| ! | TCGACTAACCAACTTGGTGA+AGG | - | chr2.3:41722798-41722817 | MS.gene033820:CDS | 45.0% |
| ! | TGGTCAACTTGGTGAACATG+AGG | - | chr2.3:41722521-41722540 | MS.gene033820:CDS | 45.0% |
| ! | TGGTGAAGGTGTGGAGTTTA+AGG | - | chr2.3:41722812-41722831 | MS.gene033820:CDS | 45.0% |
| !! | AGAGAATGGACTGGTCAACT+TGG | - | chr2.3:41722510-41722529 | MS.gene033820:CDS | 45.0% |
| ACTCCACACCTTCACCAAGT+TGG | + | chr2.3:41722809-41722828 | None:intergenic | 50.0% | |
| ATGAAGCATGGGTGCCAAGT+TGG | + | chr2.3:41722192-41722211 | None:intergenic | 50.0% | |
| GCACCCATGCTTCATGAACA+TGG | - | chr2.3:41722197-41722216 | MS.gene033820:CDS | 50.0% | |
| GCTGAACCTAGAGAATGGAC+TGG | - | chr2.3:41722501-41722520 | MS.gene033820:CDS | 50.0% | |
| GTGCCAGTGGACAAAACATG+AGG | + | chr2.3:41722441-41722460 | None:intergenic | 50.0% | |
| TCACACACAACGCATGGCTA+AGG | - | chr2.3:41722671-41722690 | MS.gene033820:CDS | 50.0% | |
| ! | TGGTTAGTCGACGAAACAGG+AGG | + | chr2.3:41722789-41722808 | None:intergenic | 50.0% |
| CACTGCTCACACACAACGCA+TGG | - | chr2.3:41722665-41722684 | MS.gene033820:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 41721832 | 41723130 | 41721832 | ID=MS.gene033820 |
| chr2.3 | mRNA | 41721832 | 41723130 | 41721832 | ID=MS.gene033820.t1;Parent=MS.gene033820 |
| chr2.3 | exon | 41722044 | 41723130 | 41722044 | ID=MS.gene033820.t1.exon1;Parent=MS.gene033820.t1 |
| chr2.3 | CDS | 41722044 | 41723130 | 41722044 | ID=cds.MS.gene033820.t1;Parent=MS.gene033820.t1 |
| chr2.3 | exon | 41721832 | 41721935 | 41721832 | ID=MS.gene033820.t1.exon2;Parent=MS.gene033820.t1 |
| chr2.3 | CDS | 41721832 | 41721935 | 41721832 | ID=cds.MS.gene033820.t1;Parent=MS.gene033820.t1 |
| Gene Sequence |
| Protein sequence |