AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene033907

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene033907.t1 MTR_6g051425 29.818 275 176 6 50 311 19 289 1.23e-33 132
MS.gene033907.t1 MTR_0856s0010 44.311 167 84 4 9 173 1 160 2.27e-33 126
MS.gene033907.t1 MTR_4g035820 30.405 296 180 12 9 288 39 324 5.61e-24 108
MS.gene033907.t1 MTR_0558s0020 24.913 289 183 8 30 284 8 296 1.49e-20 93.6
MS.gene033907.t1 MTR_7g446060 51.220 82 40 0 130 211 7 88 1.07e-19 86.3
MS.gene033907.t1 MTR_1g070355 28.511 235 153 7 54 278 80 309 1.57e-19 93.6
MS.gene033907.t1 MTR_3g450850 26.829 287 191 8 2 272 3 286 2.04e-17 85.1
MS.gene033907.t1 MTR_6g022070 28.276 145 100 1 338 482 1 141 1.73e-16 82.0
MS.gene033907.t1 MTR_8g446020 24.153 236 158 4 52 284 39 256 1.98e-16 80.5
MS.gene033907.t1 MTR_7g446480 31.395 172 117 1 122 292 143 314 3.92e-16 80.5
MS.gene033907.t1 MTR_7g446510 31.928 166 112 1 128 292 164 329 1.65e-15 79.0
MS.gene033907.t1 MTR_1g008290 31.579 133 89 1 108 240 14 144 1.96e-15 74.7
MS.gene033907.t1 MTR_7g446520 25.424 236 163 2 52 286 92 315 2.06e-15 78.6
MS.gene033907.t1 MTR_1g019850 30.303 165 98 6 17 175 43 196 3.24e-14 73.6
MS.gene033907.t1 MTR_7g115320 59.259 54 19 1 137 190 9 59 1.24e-13 67.4
MS.gene033907.t1 MTR_3g012160 41.975 81 46 1 193 273 14 93 1.33e-13 67.4
MS.gene033907.t1 MTR_1g083640 22.794 272 176 8 18 255 11 282 3.19e-13 71.2
MS.gene033907.t1 MTR_1g013060 23.944 213 147 6 44 244 20 229 3.70e-13 70.1
MS.gene033907.t1 MTR_5g023310 28.662 157 43 3 179 334 16 104 4.55e-13 66.6
MS.gene033907.t1 MTR_6g090505 25.281 178 130 2 109 283 53 230 2.56e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene033907.t1 AT4G15090 32.153 734 457 15 48 771 51 753 1.04e-120 383
MS.gene033907.t1 AT4G15090 32.153 734 457 15 48 771 51 753 1.04e-120 383
MS.gene033907.t1 AT4G15090 32.153 734 457 15 48 771 51 753 1.04e-120 383
MS.gene033907.t1 AT4G15090 32.153 734 457 15 48 771 51 753 1.04e-120 383
MS.gene033907.t1 AT4G15090 32.153 734 457 15 48 771 51 753 1.04e-120 383
MS.gene033907.t1 AT4G38180 32.178 721 437 16 8 694 38 740 7.69e-118 374
MS.gene033907.t1 AT3G22170 29.653 779 472 15 18 770 35 763 1.93e-110 356
MS.gene033907.t1 AT3G22170 29.653 779 472 15 18 770 35 763 1.93e-110 356
MS.gene033907.t1 AT1G76320 32.034 590 371 11 52 633 1 568 7.75e-104 334
MS.gene033907.t1 AT1G76320 32.034 590 371 11 52 633 1 568 2.21e-103 334
MS.gene033907.t1 AT1G76320 32.034 590 371 11 52 633 1 568 2.77e-103 334
MS.gene033907.t1 AT1G76320 32.034 590 371 11 52 633 1 568 2.77e-103 334
MS.gene033907.t1 AT1G52520 32.368 587 372 12 33 607 66 639 7.69e-102 330
MS.gene033907.t1 AT2G27110 31.803 610 363 14 48 645 49 617 1.08e-93 311
MS.gene033907.t1 AT2G27110 31.803 610 363 14 48 645 49 617 1.08e-93 311
MS.gene033907.t1 AT3G06250 33.570 563 322 15 48 606 190 704 6.49e-92 305
MS.gene033907.t1 AT3G06250 33.570 563 322 15 48 606 190 704 6.49e-92 305
MS.gene033907.t1 AT3G06250 33.570 563 322 15 48 606 190 704 6.49e-92 305
MS.gene033907.t1 AT1G80010 32.890 602 356 14 39 610 82 665 6.01e-90 298
MS.gene033907.t1 AT2G27110 34.937 478 288 9 172 645 14 472 7.00e-89 295
MS.gene033907.t1 AT5G18960 31.736 605 352 15 28 622 192 745 4.22e-85 287
MS.gene033907.t1 AT5G18960 31.736 605 352 15 28 622 192 745 4.22e-85 287
MS.gene033907.t1 AT2G32250 34.312 443 270 6 224 658 176 605 2.55e-81 276
MS.gene033907.t1 AT2G32250 34.312 443 270 6 224 658 135 564 3.11e-81 276
MS.gene033907.t1 AT2G32250 34.312 443 270 6 224 658 135 564 4.02e-81 276
MS.gene033907.t1 AT2G32250 34.312 443 270 6 224 658 176 605 4.45e-81 276
MS.gene033907.t1 AT2G32250 34.312 443 270 6 224 658 176 605 4.45e-81 276
MS.gene033907.t1 AT2G32250 34.312 443 270 6 224 658 176 605 5.48e-81 276
MS.gene033907.t1 AT2G32250 34.312 443 270 6 224 658 176 605 5.48e-81 276
MS.gene033907.t1 AT2G32250 34.312 443 270 6 224 658 176 605 5.48e-81 276
MS.gene033907.t1 AT4G19990 30.198 606 353 12 51 632 24 583 9.03e-79 269
MS.gene033907.t1 AT4G19990 30.198 606 353 12 51 632 24 583 9.03e-79 269
MS.gene033907.t1 AT4G19990 30.198 606 353 12 51 632 24 583 1.32e-78 268
MS.gene033907.t1 AT4G19990 30.198 606 353 12 51 632 38 597 1.45e-78 269
MS.gene033907.t1 AT4G19990 30.198 606 353 12 51 632 24 583 2.11e-78 268
MS.gene033907.t1 AT4G19990 30.198 606 353 12 51 632 24 583 2.11e-78 268
MS.gene033907.t1 AT4G38170 33.763 388 246 4 221 606 21 399 4.83e-75 254
MS.gene033907.t1 AT4G19990 30.983 539 318 10 104 632 32 526 1.85e-74 256
MS.gene033907.t1 AT1G10240 27.055 584 383 15 42 603 42 604 3.26e-62 222
MS.gene033907.t1 AT1G10240 27.055 584 383 15 42 603 42 604 3.26e-62 222
MS.gene033907.t1 AT5G28530 27.778 594 365 13 46 603 53 618 8.97e-60 215
MS.gene033907.t1 AT5G28530 27.521 585 374 11 46 603 53 614 3.76e-59 213
MS.gene033907.t1 AT5G28530 27.521 585 374 11 46 603 53 614 3.76e-59 213
MS.gene033907.t1 AT5G28530 26.829 328 202 7 290 603 252 555 5.52e-27 117
MS.gene033907.t1 AT5G28530 26.332 319 211 5 290 603 252 551 2.42e-26 115

Find 155 sgRNAs with CRISPR-Local

Find 194 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTGTTGACGTTTCGGATTC+CGG 0.204382 2.2:-39173703 MS.gene033907:CDS
TCTTTCCCGCTCTTCGAAAA+TGG 0.249066 2.2:+39172541 None:intergenic
GATCGCAAACCCTTGTTTCA+TGG 0.299904 2.2:+39173576 None:intergenic
AAGACCGCAACCTAGTAAAA+TGG 0.321194 2.2:+39172895 None:intergenic
GTGTTGACGTTTCGGATTCC+GGG 0.344560 2.2:-39173702 MS.gene033907:CDS
GGCTATGCAGAATGCAATTC+AGG 0.347065 2.2:-39172771 MS.gene033907:CDS
TTGCTTTAAAGAAGGGTCTA+TGG 0.361166 2.2:-39173405 MS.gene033907:CDS
TGCGGCTCGTGTTGACGTTT+CGG 0.362249 2.2:-39173710 MS.gene033907:CDS
ATGCCATTTGCCCCGTTTGT+TGG 0.369173 2.2:-39172938 MS.gene033907:CDS
ACTAAATCACGGTTGTTTGC+TGG 0.375082 2.2:-39173337 MS.gene033907:CDS
TGATCGGTTACAATTCCTAT+TGG 0.377174 2.2:+39172800 None:intergenic
AGTATTGTGTTGATTTCAAC+GGG 0.389824 2.2:-39172127 MS.gene033907:CDS
CACCACCTATGCCTAGTATT+AGG 0.393202 2.2:+39172740 None:intergenic
GTACACCCATGACAAGTATA+TGG 0.398379 2.2:-39172273 MS.gene033907:CDS
GGATTAAGAATTGGTTGATC+AGG 0.405554 2.2:+39171705 None:intergenic
CTAGGCATAGGTGGTGTCTA+TGG 0.405638 2.2:-39172733 MS.gene033907:CDS
ACTTCGACAACCGAAACAAT+TGG 0.413255 2.2:+39171585 None:intergenic
AAAGGATGATCGATCAATAT+AGG 0.415391 2.2:+39173763 None:intergenic
ACATTACTTCCTATGTCTGA+TGG 0.423977 2.2:-39171453 MS.gene033907:CDS
CCTCTGTGTTGTTGACATTC+CGG 0.424793 2.2:+39172484 None:intergenic
GATGATTGACACCAACAAAC+GGG 0.432575 2.2:+39172927 None:intergenic
TTGGTGGTATGTTTGATTCA+TGG 0.433399 2.2:+39173479 None:intergenic
TCTCCGTCAAGGGGTAATAA+AGG 0.433585 2.2:+39173745 None:intergenic
ACACCAACAAACGGGGCAAA+TGG 0.438957 2.2:+39172935 None:intergenic
GCAAACAACCGTGATTTAGT+TGG 0.439208 2.2:+39173340 None:intergenic
ATGGTTTGGGTGAAAATGAT+TGG 0.445440 2.2:-39172571 MS.gene033907:CDS
CATTACTTCCTATGTCTGAT+GGG 0.447968 2.2:-39171452 MS.gene033907:CDS
TGATGATTGACACCAACAAA+CGG 0.449717 2.2:+39172926 None:intergenic
ACACAATACTTAGTTTCGTT+CGG 0.457073 2.2:+39172140 None:intergenic
GGCTAAGGTGTATGTCTTCG+AGG 0.457503 2.2:-39172826 MS.gene033907:CDS
TATCCTACTTTGCTAGAATG+AGG 0.459924 2.2:-39173114 MS.gene033907:CDS
AAAACTAGAAACTCTAAGAA+AGG 0.460138 2.2:-39173553 MS.gene033907:CDS
AAACTAGAAACTCTAAGAAA+GGG 0.460938 2.2:-39173552 MS.gene033907:CDS
CATCCTTTATTACCCCTTGA+CGG 0.461930 2.2:-39173748 MS.gene033907:CDS
ACTCCAAGACAAGGCTGAAA+AGG 0.462412 2.2:-39172378 MS.gene033907:CDS
CAAATGGTCTAGCAAGAAGT+TGG 0.463702 2.2:-39171808 MS.gene033907:CDS
AGGTTGTGTTTCCTAATACT+AGG 0.465284 2.2:-39172751 MS.gene033907:CDS
GCAAAAGAAAGACACCTTCT+CGG 0.472868 2.2:-39173163 MS.gene033907:CDS
GATAACGGTTGCTTTAAAGA+AGG 0.473052 2.2:-39173413 MS.gene033907:CDS
AACATCACCAAAGTATTCAT+AGG 0.473828 2.2:+39173000 None:intergenic
TTTGTTGGTGTCAATCATCA+TGG 0.475674 2.2:-39172923 MS.gene033907:CDS
CCACACATAGAAAGATTTGA+AGG 0.478166 2.2:-39171912 MS.gene033907:CDS
GCCACATTGTGGTGTGGGAG+GGG 0.479684 2.2:-39171769 MS.gene033907:CDS
GAGCAATCAAGTTTCTTCGT+TGG 0.480101 2.2:+39173442 None:intergenic
CACTTATGCTCGATGGCTGA+TGG 0.482201 2.2:-39173790 None:intergenic
TCGGGAAGGAAGGAGATGGC+AGG 0.482875 2.2:-39173144 MS.gene033907:CDS
ATTTGTTGTTTCAAAGGTCC+CGG 0.485747 2.2:+39173684 None:intergenic
TTGAAATTGTCTCTCGATTG+TGG 0.489013 2.2:+39172301 None:intergenic
GACAGCATTTGTTGTTTCAA+AGG 0.491833 2.2:+39173678 None:intergenic
CTTGTTTCATGGCATATTCA+CGG 0.492232 2.2:+39173587 None:intergenic
AAAACCACTAGTTGACTGTT+GGG 0.492621 2.2:+39171392 None:intergenic
TCCGTTAAAAGTACCACGTA+AGG 0.492742 2.2:-39171685 MS.gene033907:CDS
GACAATACTCTCCTCTAAAA+CGG 0.498094 2.2:+39172172 None:intergenic
CGTGAATATGCCATGAAACA+AGG 0.498225 2.2:-39173586 MS.gene033907:CDS
ATCAGCTAGCTCTCCGTCAA+GGG 0.500449 2.2:+39173735 None:intergenic
TGTATGAAGAAATGATCAAA+TGG 0.501577 2.2:-39171824 MS.gene033907:CDS
TTAAAAGACATACCGATAGT+AGG 0.501742 2.2:+39173637 None:intergenic
TTTCGAAGAGCGGGAAAGAT+GGG 0.502201 2.2:-39172537 MS.gene033907:CDS
GTTGGATTCGTCTTCAAAGT+TGG 0.502236 2.2:+39173460 None:intergenic
ATACTTGTCATGGGTGTACT+CGG 0.502362 2.2:+39172277 None:intergenic
CATCTCCTTCCTTCCCGAGA+AGG 0.502837 2.2:+39173149 None:intergenic
TTACCTGGTTGTTCGAAACA+TGG 0.503284 2.2:-39172847 MS.gene033907:CDS
TGGTCATCTTAGAGTGAAAG+AGG 0.503540 2.2:-39172027 MS.gene033907:CDS
TCGGTTACAATTCCTATTGG+AGG 0.507036 2.2:+39172803 None:intergenic
ATGTCTTCGAGGCCTCCAAT+AGG 0.511194 2.2:-39172815 MS.gene033907:CDS
TCTGATGGGTTTCAAGCGTC+CGG 0.512219 2.2:-39171438 MS.gene033907:CDS
TTACGAAAATCTAACATTTG+TGG 0.512305 2.2:-39173209 MS.gene033907:CDS
AAACGATCAGGCAGGTGTAC+GGG 0.512319 2.2:-39173272 MS.gene033907:CDS
GAGAGATGTCAGAAACTTTG+TGG 0.514693 2.2:-39173185 MS.gene033907:CDS
TCTGGGCTGATGCACGTAGT+AGG 0.516810 2.2:-39173027 MS.gene033907:CDS
CAAAAGAAAGACACCTTCTC+GGG 0.517286 2.2:-39173162 MS.gene033907:CDS
GTATCTCCATATACTTGTCA+TGG 0.517305 2.2:+39172267 None:intergenic
CCTTCAAATCTTTCTATGTG+TGG 0.521556 2.2:+39171912 None:intergenic
ATAACGGTTGCTTTAAAGAA+GGG 0.522275 2.2:-39173412 MS.gene033907:CDS
TTCCCTCATTCTAGCAAAGT+AGG 0.524536 2.2:+39173111 None:intergenic
AAATGGTCTAGCAAGAAGTT+GGG 0.529100 2.2:-39171807 MS.gene033907:CDS
GAACAAAAGTTTCCGTTCCA+TGG 0.529264 2.2:-39173248 MS.gene033907:CDS
GGATTCGTCTTCAAAGTTGG+TGG 0.530111 2.2:+39173463 None:intergenic
TAAACGATCAGGCAGGTGTA+CGG 0.533293 2.2:-39173273 MS.gene033907:CDS
AAGTATTGTGTTGATTTCAA+CGG 0.536214 2.2:-39172128 MS.gene033907:CDS
TAAAACCACTAGTTGACTGT+TGG 0.536849 2.2:+39171391 None:intergenic
ATCCTACTTTGCTAGAATGA+GGG 0.537508 2.2:-39173113 MS.gene033907:CDS
CTGCATAGCCTTGCACTGAT+CGG 0.542185 2.2:+39172784 None:intergenic
CTATGAGATTGACATGGACG+AGG 0.547341 2.2:-39173071 MS.gene033907:CDS
TGATTGCTCAGCTAAGATAA+CGG 0.550952 2.2:-39173428 MS.gene033907:CDS
GATAAATTCACGCCTACTAT+CGG 0.551302 2.2:-39173649 MS.gene033907:CDS
TGTTTGCTGTTTGAGTTCAG+AGG 0.551367 2.2:-39172080 MS.gene033907:CDS
TATCTCCATATACTTGTCAT+GGG 0.551454 2.2:+39172268 None:intergenic
ATTCTAACTTGTGCAAGAGA+AGG 0.552020 2.2:-39173505 MS.gene033907:CDS
AGGTCTGCCTATGAATACTT+TGG 0.552277 2.2:-39173007 MS.gene033907:CDS
AGACACCTTCTCGGGAAGGA+AGG 0.553011 2.2:-39173154 MS.gene033907:CDS
CAGCCACATTGTGGTGTGGG+AGG 0.557227 2.2:-39171771 MS.gene033907:CDS
TTACAGCCACATTGTGGTGT+GGG 0.557892 2.2:-39171774 MS.gene033907:CDS
TGTTTCGAACAACCAGGTAA+AGG 0.558836 2.2:+39172850 None:intergenic
AACTCTAAGAAAGGGGCCGA+TGG 0.560180 2.2:-39173544 MS.gene033907:CDS
AGCCACATTGTGGTGTGGGA+GGG 0.562336 2.2:-39171770 MS.gene033907:CDS
CTAAATTTATCTTGCCACGA+TGG 0.563368 2.2:-39171998 MS.gene033907:CDS
CATCAGCTAGCTCTCCGTCA+AGG 0.566436 2.2:+39173734 None:intergenic
GAGATACAAGTAGAATTTCG+TGG 0.566723 2.2:-39172251 MS.gene033907:CDS
GAACAACCAGGTAAAGGACT+TGG 0.570795 2.2:+39172856 None:intergenic
TGTTTCCTAATACTAGGCAT+AGG 0.571109 2.2:-39172745 MS.gene033907:CDS
TTGTTGGTGTCAATCATCAT+GGG 0.576932 2.2:-39172922 MS.gene033907:CDS
TCTCGAAGGTGTGACTACAT+TGG 0.577648 2.2:-39172213 MS.gene033907:CDS
AAGATACCAAGTCCTTTACC+TGG 0.578911 2.2:-39172862 MS.gene033907:CDS
TCAGACATAGGAAGTAATGT+AGG 0.589454 2.2:+39171456 None:intergenic
TTGTGTGTATGATTCTCTGC+GGG 0.590009 2.2:-39172636 MS.gene033907:CDS
CATTTCTTCATACAAATCAG+AGG 0.596809 2.2:+39171833 None:intergenic
ACCACGGGCATCACATACCA+TGG 0.597354 2.2:+39173231 None:intergenic
GCTTGAAACCCATCAGACAT+AGG 0.602294 2.2:+39171444 None:intergenic
GTGAATATGCCATGAAACAA+GGG 0.602322 2.2:-39173585 MS.gene033907:CDS
GAAGTAGTTAAGCGTATCAC+CGG 0.605920 2.2:+39171419 None:intergenic
CGACAACGCACTCCAAGACA+AGG 0.606607 2.2:-39172387 MS.gene033907:CDS
AGATACAAGTAGAATTTCGT+GGG 0.607840 2.2:-39172250 MS.gene033907:CDS
AGAAAGACACCTTCTCGGGA+AGG 0.609091 2.2:-39173158 MS.gene033907:CDS
GACAACCGACGATTAGTTCG+AGG 0.611005 2.2:+39171657 None:intergenic
TGCATCAATGAGCAAAGATG+TGG 0.611914 2.2:-39171358 MS.gene033907:CDS
AAATGCAACTGTTATCTCGA+AGG 0.615193 2.2:-39172227 MS.gene033907:CDS
TTCCTAATACTAGGCATAGG+TGG 0.615209 2.2:-39172742 MS.gene033907:CDS
CAAGCACAATCATTCCATGC+GGG 0.616971 2.2:-39172331 MS.gene033907:CDS
GGTTGTTCGAAACATGGCTA+AGG 0.617470 2.2:-39172841 MS.gene033907:CDS
CGTGGCAAGATAAATTTAGA+CGG 0.619992 2.2:+39172002 None:intergenic
CGGGAAGGAAGGAGATGGCA+GGG 0.622349 2.2:-39173143 MS.gene033907:CDS
AATTGTAACCGATCAGTGCA+AGG 0.623201 2.2:-39172792 MS.gene033907:CDS
TCATCCCAACAGTCAACTAG+TGG 0.623204 2.2:-39171396 MS.gene033907:CDS
CCGTTAAAAGTACCACGTAA+GGG 0.624486 2.2:-39171684 MS.gene033907:CDS
TAGCCATGTTTCGAACAACC+AGG 0.627145 2.2:+39172844 None:intergenic
ATTGTGGAATTTGACCCGCA+TGG 0.627292 2.2:+39172317 None:intergenic
GTTCGAGGACGTCCCTTACG+TGG 0.628497 2.2:+39171672 None:intergenic
CAAGGCTGAAAAGGAATACG+AGG 0.629739 2.2:-39172369 MS.gene033907:CDS
CTTCTCGGGAAGGAAGGAGA+TGG 0.631777 2.2:-39173148 MS.gene033907:CDS
TTTACAGCCACATTGTGGTG+TGG 0.632168 2.2:-39171775 MS.gene033907:CDS
AACTAGAAACTCTAAGAAAG+GGG 0.633083 2.2:-39173551 MS.gene033907:CDS
ATGAGTTTACAGCCACATTG+TGG 0.634509 2.2:-39171780 MS.gene033907:CDS
AAAGGATACGCACAATACAA+AGG 0.637659 2.2:-39172680 MS.gene033907:CDS
GGATGATCGATCAATATAGG+AGG 0.639611 2.2:+39173766 None:intergenic
TACAAATCAGAGGTTTGACT+AGG 0.642589 2.2:+39171843 None:intergenic
AGATAAGTCCAACTAAATCA+CGG 0.645312 2.2:-39173348 MS.gene033907:CDS
GGGCATCACATACCATGGAA+CGG 0.648721 2.2:+39173236 None:intergenic
CTTGACGGAGAGCTAGCTGA+TGG 0.649164 2.2:-39173733 MS.gene033907:CDS
TCAGCTAGCTCTCCGTCAAG+GGG 0.651971 2.2:+39173736 None:intergenic
TTATGAAATTGCAGAATGTG+CGG 0.662542 2.2:-39171874 MS.gene033907:CDS
CGGAGAGCTAGCTGATGGTG+CGG 0.664984 2.2:-39173728 MS.gene033907:CDS
ATGATTGACACCAACAAACG+GGG 0.665562 2.2:+39172928 None:intergenic
TTAGAGGAGAGTATTGTCTG+TGG 0.669312 2.2:-39172167 MS.gene033907:CDS
GGATCATAGCTTAAACACGA+TGG 0.674970 2.2:-39171748 MS.gene033907:CDS
GACGTCCTCGAACTAATCGT+CGG 0.680634 2.2:-39171662 MS.gene033907:CDS
TCATAGCTTAAACACGATGG+AGG 0.690849 2.2:-39171745 MS.gene033907:CDS
ATACTTGTTTGTCAAGTACG+TGG 0.696002 2.2:+39172964 None:intergenic
TCAAGCACAATCATTCCATG+CGG 0.697666 2.2:-39172332 MS.gene033907:CDS
TCCCCTCCCACACCACAATG+TGG 0.710147 2.2:+39171768 None:intergenic
ATTGTGTGTATGATTCTCTG+CGG 0.733784 2.2:-39172637 MS.gene033907:CDS
TCCATGGTATGTGATGCCCG+TGG 0.764195 2.2:-39173232 MS.gene033907:CDS
CCGGAATGTCAACAACACAG+AGG 0.797075 2.2:-39172484 MS.gene033907:CDS
AGATTGATATGCATGCACAG+CGG 0.798983 2.2:-39173306 MS.gene033907:CDS
GTATTGTGTTGATTTCAACG+GGG 0.841514 2.2:-39172126 MS.gene033907:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTTAAAAAATGATTTCT+GGG - chr2.2:39172612-39172631 MS.gene033907:CDS 10.0%
!!! AAATCATTTTTTAAATAACA+TGG + chr2.2:39172610-39172629 None:intergenic 10.0%
!! AATGTAATCACAATAATAAT+AGG + chr2.2:39173573-39173592 None:intergenic 15.0%
!! GTTATTTAAAAAATGATTTC+TGG - chr2.2:39172611-39172630 MS.gene033907:CDS 15.0%
!! AAGAAAAAAACCAATTGTTT+CGG - chr2.2:39173524-39173543 MS.gene033907:CDS 20.0%
!! ACAACATTCATTGAAAAATA+TGG - chr2.2:39172529-39172548 MS.gene033907:CDS 20.0%
!! ATTCATTGAAAAATATGGTT+TGG - chr2.2:39172534-39172553 MS.gene033907:CDS 20.0%
!! TTCATTGAAAAATATGGTTT+GGG - chr2.2:39172535-39172554 MS.gene033907:CDS 20.0%
! AAAATTGCCGAAAAATTGAA+AGG - chr2.2:39172421-39172440 MS.gene033907:CDS 25.0%
! TGTATGAAGAAATGATCAAA+TGG - chr2.2:39173295-39173314 MS.gene033907:CDS 25.0%
! TTACGAAAATCTAACATTTG+TGG - chr2.2:39171910-39171929 MS.gene033907:CDS 25.0%
!! AAAACTAGAAACTCTAAGAA+AGG - chr2.2:39171566-39171585 MS.gene033907:intron 25.0%
!! AAACTAGAAACTCTAAGAAA+GGG - chr2.2:39171567-39171586 MS.gene033907:intron 25.0%
!! TATCGGTATGTCTTTTAAAT+CGG - chr2.2:39171487-39171506 MS.gene033907:intron 25.0%
!!! AAGTATTGTGTTGATTTCAA+CGG - chr2.2:39172991-39173010 MS.gene033907:CDS 25.0%
!!! ACTTTTAACGGATTAAGAAT+TGG + chr2.2:39173426-39173445 None:intergenic 25.0%
!!! GAAATATTTTAACATGCCAT+CGG + chr2.2:39171594-39171613 None:intergenic 25.0%
!!! TTTTTTCACAATCTTTTCAG+TGG + chr2.2:39173490-39173509 None:intergenic 25.0%
AAAGGATGATCGATCAATAT+AGG + chr2.2:39171359-39171378 None:intergenic 30.0%
ACACAATACTTAGTTTCGTT+CGG + chr2.2:39172982-39173001 None:intergenic 30.0%
AGATAAGTCCAACTAAATCA+CGG - chr2.2:39171771-39171790 MS.gene033907:CDS 30.0%
AGATACAAGTAGAATTTCGT+GGG - chr2.2:39172869-39172888 MS.gene033907:CDS 30.0%
CATTTCTTCATACAAATCAG+AGG + chr2.2:39173289-39173308 None:intergenic 30.0%
TATCTCCATATACTTGTCAT+GGG + chr2.2:39172854-39172873 None:intergenic 30.0%
TTAAAAGACATACCGATAGT+AGG + chr2.2:39171485-39171504 None:intergenic 30.0%
TTATGAAATTGCAGAATGTG+CGG - chr2.2:39173245-39173264 MS.gene033907:CDS 30.0%
! AACATCACCAAAGTATTCAT+AGG + chr2.2:39172122-39172141 None:intergenic 30.0%
! AACTAGAAACTCTAAGAAAG+GGG - chr2.2:39171568-39171587 MS.gene033907:intron 30.0%
! ATGTTAGATTTTCGTAACCA+CGG + chr2.2:39171907-39171926 None:intergenic 30.0%
! CTTTTTCTATGAGATTGACA+TGG - chr2.2:39172042-39172061 MS.gene033907:CDS 30.0%
! TCATGTGCAGAATATTTTCT+GGG - chr2.2:39172075-39172094 MS.gene033907:CDS 30.0%
! TGCGTATCCTTTCAATTTTT+CGG + chr2.2:39172431-39172450 None:intergenic 30.0%
! TTAAAAAATGATTTCTGGGC+CGG - chr2.2:39172616-39172635 MS.gene033907:CDS 30.0%
! TTCATGTGCAGAATATTTTC+TGG - chr2.2:39172074-39172093 MS.gene033907:CDS 30.0%
!! AGTATTGTGTTGATTTCAAC+GGG - chr2.2:39172992-39173011 MS.gene033907:CDS 30.0%
!! ATAACGGTTGCTTTAAAGAA+GGG - chr2.2:39171707-39171726 MS.gene033907:CDS 30.0%
!! GACAATTTTGATAAACGATC+AGG - chr2.2:39171835-39171854 MS.gene033907:CDS 30.0%
!!! AGTATGAATGCTTTTTTCGA+TGG - chr2.2:39172664-39172683 MS.gene033907:CDS 30.0%
!!! TATGTGTGGTTGTAGTTTTT+TGG + chr2.2:39173196-39173215 None:intergenic 30.0%
AAAACCACTAGTTGACTGTT+GGG + chr2.2:39173730-39173749 None:intergenic 35.0%
AAAGGATACGCACAATACAA+AGG - chr2.2:39172439-39172458 MS.gene033907:CDS 35.0%
AAATGCAACTGTTATCTCGA+AGG - chr2.2:39172892-39172911 MS.gene033907:CDS 35.0%
AAATGGTCTAGCAAGAAGTT+GGG - chr2.2:39173312-39173331 MS.gene033907:CDS 35.0%
ACATTACTTCCTATGTCTGA+TGG - chr2.2:39173666-39173685 MS.gene033907:CDS 35.0%
AGGTTGTGTTTCCTAATACT+AGG - chr2.2:39172368-39172387 MS.gene033907:CDS 35.0%
ATACTTGTTTGTCAAGTACG+TGG + chr2.2:39172158-39172177 None:intergenic 35.0%
ATCCTACTTTGCTAGAATGA+GGG - chr2.2:39172006-39172025 MS.gene033907:CDS 35.0%
ATTGTGTGTATGATTCTCTG+CGG - chr2.2:39172482-39172501 MS.gene033907:CDS 35.0%
CATTACTTCCTATGTCTGAT+GGG - chr2.2:39173667-39173686 MS.gene033907:CDS 35.0%
CCACACATAGAAAGATTTGA+AGG - chr2.2:39173207-39173226 MS.gene033907:CDS 35.0%
CCTTCAAATCTTTCTATGTG+TGG + chr2.2:39173210-39173229 None:intergenic 35.0%
CGTGGCAAGATAAATTTAGA+CGG + chr2.2:39173120-39173139 None:intergenic 35.0%
CTAAATTTATCTTGCCACGA+TGG - chr2.2:39173121-39173140 MS.gene033907:CDS 35.0%
CTTGTTTCATGGCATATTCA+CGG + chr2.2:39171535-39171554 None:intergenic 35.0%
GAGATACAAGTAGAATTTCG+TGG - chr2.2:39172868-39172887 MS.gene033907:CDS 35.0%
GATAAATTCACGCCTACTAT+CGG - chr2.2:39171470-39171489 MS.gene033907:intron 35.0%
GGATTAAGAATTGGTTGATC+AGG + chr2.2:39173417-39173436 None:intergenic 35.0%
GTATCTCCATATACTTGTCA+TGG + chr2.2:39172855-39172874 None:intergenic 35.0%
GTGAATATGCCATGAAACAA+GGG - chr2.2:39171534-39171553 MS.gene033907:intron 35.0%
TAAAACCACTAGTTGACTGT+TGG + chr2.2:39173731-39173750 None:intergenic 35.0%
TACAAATCAGAGGTTTGACT+AGG + chr2.2:39173279-39173298 None:intergenic 35.0%
TATCCTACTTTGCTAGAATG+AGG - chr2.2:39172005-39172024 MS.gene033907:CDS 35.0%
TCAGACATAGGAAGTAATGT+AGG + chr2.2:39173666-39173685 None:intergenic 35.0%
TGATCGGTTACAATTCCTAT+TGG + chr2.2:39172322-39172341 None:intergenic 35.0%
TGATGATTGACACCAACAAA+CGG + chr2.2:39172196-39172215 None:intergenic 35.0%
TGATTGCTCAGCTAAGATAA+CGG - chr2.2:39171691-39171710 MS.gene033907:CDS 35.0%
TGTTTCCTAATACTAGGCAT+AGG - chr2.2:39172374-39172393 MS.gene033907:CDS 35.0%
TTGAAATTGTCTCTCGATTG+TGG + chr2.2:39172821-39172840 None:intergenic 35.0%
! AGGAATACGAGGTAGATTTT+CGG - chr2.2:39172761-39172780 MS.gene033907:CDS 35.0%
! ATCTACATACACCGTTTTAG+AGG - chr2.2:39172936-39172955 MS.gene033907:CDS 35.0%
! ATGGTTTGGGTGAAAATGAT+TGG - chr2.2:39172548-39172567 MS.gene033907:CDS 35.0%
! ATTCTAACTTGTGCAAGAGA+AGG - chr2.2:39171614-39171633 MS.gene033907:CDS 35.0%
! CAATCCATTTTACTAGGTTG+CGG - chr2.2:39172220-39172239 MS.gene033907:CDS 35.0%
! GACAATACTCTCCTCTAAAA+CGG + chr2.2:39172950-39172969 None:intergenic 35.0%
! TGAATACCATTTTCGAAGAG+CGG - chr2.2:39172572-39172591 MS.gene033907:CDS 35.0%
! TGTTAGATTTTCGTAACCAC+GGG + chr2.2:39171906-39171925 None:intergenic 35.0%
! TTCACATTTTTACTCCATCG+TGG + chr2.2:39173138-39173157 None:intergenic 35.0%
! TTGGTGGTATGTTTGATTCA+TGG + chr2.2:39171643-39171662 None:intergenic 35.0%
! TTTCACAATCTTTTCAGTGG+TGG + chr2.2:39173487-39173506 None:intergenic 35.0%
!! ATTTGTTGTTTCAAAGGTCC+CGG + chr2.2:39171438-39171457 None:intergenic 35.0%
!! ATTTTGATAAACGATCAGGC+AGG - chr2.2:39171839-39171858 MS.gene033907:CDS 35.0%
!! GACAGCATTTGTTGTTTCAA+AGG + chr2.2:39171444-39171463 None:intergenic 35.0%
!! GATAACGGTTGCTTTAAAGA+AGG - chr2.2:39171706-39171725 MS.gene033907:CDS 35.0%
!! GTATTGTGTTGATTTCAACG+GGG - chr2.2:39172993-39173012 MS.gene033907:CDS 35.0%
!! TTGCTTTAAAGAAGGGTCTA+TGG - chr2.2:39171714-39171733 MS.gene033907:CDS 35.0%
!! TTGTTGGTGTCAATCATCAT+GGG - chr2.2:39172197-39172216 MS.gene033907:CDS 35.0%
!! TTTGTTGGTGTCAATCATCA+TGG - chr2.2:39172196-39172215 MS.gene033907:CDS 35.0%
!!! GGGTTGATGATTTTGTTGTT+GGG - chr2.2:39172503-39172522 MS.gene033907:CDS 35.0%
!!! TTGATGATTTTGTTGTTGGG+TGG - chr2.2:39172506-39172525 MS.gene033907:CDS 35.0%
AAGACCGCAACCTAGTAAAA+TGG + chr2.2:39172227-39172246 None:intergenic 40.0%
AAGATACCAAGTCCTTTACC+TGG - chr2.2:39172257-39172276 MS.gene033907:CDS 40.0%
AATTGTAACCGATCAGTGCA+AGG - chr2.2:39172327-39172346 MS.gene033907:CDS 40.0%
ACTAAATCACGGTTGTTTGC+TGG - chr2.2:39171782-39171801 MS.gene033907:CDS 40.0%
ACTTCGACAACCGAAACAAT+TGG + chr2.2:39173537-39173556 None:intergenic 40.0%
AGATTGATATGCATGCACAG+CGG - chr2.2:39171813-39171832 MS.gene033907:CDS 40.0%
AGGTCTGCCTATGAATACTT+TGG - chr2.2:39172112-39172131 MS.gene033907:CDS 40.0%
ATACTTGTCATGGGTGTACT+CGG + chr2.2:39172845-39172864 None:intergenic 40.0%
ATGAGTTTACAGCCACATTG+TGG - chr2.2:39173339-39173358 MS.gene033907:CDS 40.0%
ATGATTGACACCAACAAACG+GGG + chr2.2:39172194-39172213 None:intergenic 40.0%
CAAAAGAAAGACACCTTCTC+GGG - chr2.2:39171957-39171976 MS.gene033907:CDS 40.0%
CAAATGGTCTAGCAAGAAGT+TGG - chr2.2:39173311-39173330 MS.gene033907:CDS 40.0%
CATCCTTTATTACCCCTTGA+CGG - chr2.2:39171371-39171390 MS.gene033907:CDS 40.0%
CGTGAATATGCCATGAAACA+AGG - chr2.2:39171533-39171552 MS.gene033907:intron 40.0%
GAACAAAAGTTTCCGTTCCA+TGG - chr2.2:39171871-39171890 MS.gene033907:CDS 40.0%
GAAGTAGTTAAGCGTATCAC+CGG + chr2.2:39173703-39173722 None:intergenic 40.0%
GAGAGATGTCAGAAACTTTG+TGG - chr2.2:39171934-39171953 MS.gene033907:CDS 40.0%
GAGCAATCAAGTTTCTTCGT+TGG + chr2.2:39171680-39171699 None:intergenic 40.0%
GATGATTGACACCAACAAAC+GGG + chr2.2:39172195-39172214 None:intergenic 40.0%
GCAAAAGAAAGACACCTTCT+CGG - chr2.2:39171956-39171975 MS.gene033907:CDS 40.0%
GCAAACAACCGTGATTTAGT+TGG + chr2.2:39171782-39171801 None:intergenic 40.0%
GGATCATAGCTTAAACACGA+TGG - chr2.2:39173371-39173390 MS.gene033907:CDS 40.0%
GGATGATCGATCAATATAGG+AGG + chr2.2:39171356-39171375 None:intergenic 40.0%
GTACACCCATGACAAGTATA+TGG - chr2.2:39172846-39172865 MS.gene033907:CDS 40.0%
GTTGGATTCGTCTTCAAAGT+TGG + chr2.2:39171662-39171681 None:intergenic 40.0%
TCAAGCACAATCATTCCATG+CGG - chr2.2:39172787-39172806 MS.gene033907:CDS 40.0%
TCATAGCTTAAACACGATGG+AGG - chr2.2:39173374-39173393 MS.gene033907:CDS 40.0%
TCGGTTACAATTCCTATTGG+AGG + chr2.2:39172319-39172338 None:intergenic 40.0%
TGCATCAATGAGCAAAGATG+TGG - chr2.2:39173761-39173780 MS.gene033907:CDS 40.0%
TGGTCATCTTAGAGTGAAAG+AGG - chr2.2:39173092-39173111 MS.gene033907:CDS 40.0%
TGTTTCGAACAACCAGGTAA+AGG + chr2.2:39172272-39172291 None:intergenic 40.0%
TTACCTGGTTGTTCGAAACA+TGG - chr2.2:39172272-39172291 MS.gene033907:CDS 40.0%
TTCCCTCATTCTAGCAAAGT+AGG + chr2.2:39172011-39172030 None:intergenic 40.0%
TTCCTAATACTAGGCATAGG+TGG - chr2.2:39172377-39172396 MS.gene033907:CDS 40.0%
TTGTGTGTATGATTCTCTGC+GGG - chr2.2:39172483-39172502 MS.gene033907:CDS 40.0%
TTTCGGTTGTCGAAGTAAGT+TGG - chr2.2:39173541-39173560 MS.gene033907:CDS 40.0%
! CATGGGCAATCCATTTTACT+AGG - chr2.2:39172214-39172233 MS.gene033907:CDS 40.0%
! CCCTTACGTGGTACTTTTAA+CGG + chr2.2:39173438-39173457 None:intergenic 40.0%
! GAATACCATTTTCGAAGAGC+GGG - chr2.2:39172573-39172592 MS.gene033907:CDS 40.0%
!! AGACATGCGCTTTTTGTACT+TGG - chr2.2:39173072-39173091 MS.gene033907:CDS 40.0%
!! ATTCCTTTTCAGCCTTGTCT+TGG + chr2.2:39172747-39172766 None:intergenic 40.0%
!! CCGTTAAAAGTACCACGTAA+GGG - chr2.2:39173435-39173454 MS.gene033907:CDS 40.0%
!! TCCGTTAAAAGTACCACGTA+AGG - chr2.2:39173434-39173453 MS.gene033907:CDS 40.0%
!! TGTTTGCTGTTTGAGTTCAG+AGG - chr2.2:39173039-39173058 MS.gene033907:CDS 40.0%
!! TTAGAGGAGAGTATTGTCTG+TGG - chr2.2:39172952-39172971 MS.gene033907:CDS 40.0%
!!! CGGGTTGATGATTTTGTTGT+TGG - chr2.2:39172502-39172521 MS.gene033907:CDS 40.0%
ACTCCAAGACAAGGCTGAAA+AGG - chr2.2:39172741-39172760 MS.gene033907:CDS 45.0%
ATTGTGGAATTTGACCCGCA+TGG + chr2.2:39172805-39172824 None:intergenic 45.0%
CAAGCACAATCATTCCATGC+GGG - chr2.2:39172788-39172807 MS.gene033907:CDS 45.0%
CAAGGCTGAAAAGGAATACG+AGG - chr2.2:39172750-39172769 MS.gene033907:CDS 45.0%
CACCACCTATGCCTAGTATT+AGG + chr2.2:39172382-39172401 None:intergenic 45.0%
CTATGAGATTGACATGGACG+AGG - chr2.2:39172048-39172067 MS.gene033907:CDS 45.0%
GAACAACCAGGTAAAGGACT+TGG + chr2.2:39172266-39172285 None:intergenic 45.0%
GCTTGAAACCCATCAGACAT+AGG + chr2.2:39173678-39173697 None:intergenic 45.0%
GGATTCGTCTTCAAAGTTGG+TGG + chr2.2:39171659-39171678 None:intergenic 45.0%
GGCTATGCAGAATGCAATTC+AGG - chr2.2:39172348-39172367 MS.gene033907:CDS 45.0%
GGTTGTTCGAAACATGGCTA+AGG - chr2.2:39172278-39172297 MS.gene033907:CDS 45.0%
TAAACGATCAGGCAGGTGTA+CGG - chr2.2:39171846-39171865 MS.gene033907:CDS 45.0%
TAGCCATGTTTCGAACAACC+AGG + chr2.2:39172278-39172297 None:intergenic 45.0%
TCATCCCAACAGTCAACTAG+TGG - chr2.2:39173723-39173742 MS.gene033907:CDS 45.0%
TCTCCGTCAAGGGGTAATAA+AGG + chr2.2:39171377-39171396 None:intergenic 45.0%
TCTTTCCCGCTCTTCGAAAA+TGG + chr2.2:39172581-39172600 None:intergenic 45.0%
TTACAGCCACATTGTGGTGT+GGG - chr2.2:39173345-39173364 MS.gene033907:CDS 45.0%
TTTACAGCCACATTGTGGTG+TGG - chr2.2:39173344-39173363 MS.gene033907:CDS 45.0%
TTTCGAAGAGCGGGAAAGAT+GGG - chr2.2:39172582-39172601 MS.gene033907:CDS 45.0%
! CCTCTGTGTTGTTGACATTC+CGG + chr2.2:39172638-39172657 None:intergenic 45.0%
! GATCGCAAACCCTTGTTTCA+TGG + chr2.2:39171546-39171565 None:intergenic 45.0%
! TCTCGAAGGTGTGACTACAT+TGG - chr2.2:39172906-39172925 MS.gene033907:CDS 45.0%
! TTTTCGAAGAGCGGGAAAGA+TGG - chr2.2:39172581-39172600 MS.gene033907:CDS 45.0%
AAACGATCAGGCAGGTGTAC+GGG - chr2.2:39171847-39171866 MS.gene033907:CDS 50.0%
ACACCAACAAACGGGGCAAA+TGG + chr2.2:39172187-39172206 None:intergenic 50.0%
AGAAAGACACCTTCTCGGGA+AGG - chr2.2:39171961-39171980 MS.gene033907:CDS 50.0%
ATGTCTTCGAGGCCTCCAAT+AGG - chr2.2:39172304-39172323 MS.gene033907:CDS 50.0%
CCGGAATGTCAACAACACAG+AGG - chr2.2:39172635-39172654 MS.gene033907:CDS 50.0%
CTAGGCATAGGTGGTGTCTA+TGG - chr2.2:39172386-39172405 MS.gene033907:CDS 50.0%
GACGTCCTCGAACTAATCGT+CGG - chr2.2:39173457-39173476 MS.gene033907:CDS 50.0%
GGCTAAGGTGTATGTCTTCG+AGG - chr2.2:39172293-39172312 MS.gene033907:CDS 50.0%
GGGCATCACATACCATGGAA+CGG + chr2.2:39171886-39171905 None:intergenic 50.0%
! AACTCTAAGAAAGGGGCCGA+TGG - chr2.2:39171575-39171594 MS.gene033907:intron 50.0%
! ATCAGCTAGCTCTCCGTCAA+GGG + chr2.2:39171387-39171406 None:intergenic 50.0%
! ATGCCATTTGCCCCGTTTGT+TGG - chr2.2:39172181-39172200 MS.gene033907:CDS 50.0%
! CGTGTTGACGTTTCGGATTC+CGG - chr2.2:39171416-39171435 MS.gene033907:CDS 50.0%
! CTGCATAGCCTTGCACTGAT+CGG + chr2.2:39172338-39172357 None:intergenic 50.0%
! GACAACCGACGATTAGTTCG+AGG + chr2.2:39173465-39173484 None:intergenic 50.0%
! GTGTTGACGTTTCGGATTCC+GGG - chr2.2:39171417-39171436 MS.gene033907:CDS 50.0%
!! TCTGATGGGTTTCAAGCGTC+CGG - chr2.2:39173681-39173700 MS.gene033907:CDS 50.0%
ACCACGGGCATCACATACCA+TGG + chr2.2:39171891-39171910 None:intergenic 55.0%
AGACACCTTCTCGGGAAGGA+AGG - chr2.2:39171965-39171984 MS.gene033907:CDS 55.0%
AGCCACATTGTGGTGTGGGA+GGG - chr2.2:39173349-39173368 MS.gene033907:CDS 55.0%
CATCTCCTTCCTTCCCGAGA+AGG + chr2.2:39171973-39171992 None:intergenic 55.0%
CGACAACGCACTCCAAGACA+AGG - chr2.2:39172732-39172751 MS.gene033907:CDS 55.0%
CTTCTCGGGAAGGAAGGAGA+TGG - chr2.2:39171971-39171990 MS.gene033907:CDS 55.0%
CTTGACGGAGAGCTAGCTGA+TGG - chr2.2:39171386-39171405 MS.gene033907:CDS 55.0%
TCCATGGTATGTGATGCCCG+TGG - chr2.2:39171887-39171906 MS.gene033907:CDS 55.0%
TCTGGGCTGATGCACGTAGT+AGG - chr2.2:39172092-39172111 MS.gene033907:CDS 55.0%
! CATCAGCTAGCTCTCCGTCA+AGG + chr2.2:39171388-39171407 None:intergenic 55.0%
! TCAGCTAGCTCTCCGTCAAG+GGG + chr2.2:39171386-39171405 None:intergenic 55.0%
! TGCGGCTCGTGTTGACGTTT+CGG - chr2.2:39171409-39171428 MS.gene033907:CDS 55.0%
CAGCCACATTGTGGTGTGGG+AGG - chr2.2:39173348-39173367 MS.gene033907:CDS 60.0%
CGGGAAGGAAGGAGATGGCA+GGG - chr2.2:39171976-39171995 MS.gene033907:CDS 60.0%
GCCACATTGTGGTGTGGGAG+GGG - chr2.2:39173350-39173369 MS.gene033907:CDS 60.0%
GTTCGAGGACGTCCCTTACG+TGG + chr2.2:39173450-39173469 None:intergenic 60.0%
TCCCCTCCCACACCACAATG+TGG + chr2.2:39173354-39173373 None:intergenic 60.0%
TCGGGAAGGAAGGAGATGGC+AGG - chr2.2:39171975-39171994 MS.gene033907:CDS 60.0%
! CGGAGAGCTAGCTGATGGTG+CGG - chr2.2:39171391-39171410 MS.gene033907:CDS 60.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 39171341 39173800 39171341 ID=MS.gene033907
chr2.2 mRNA 39171341 39173800 39171341 ID=MS.gene033907.t1;Parent=MS.gene033907
chr2.2 exon 39171587 39173800 39171587 ID=MS.gene033907.t1.exon1;Parent=MS.gene033907.t1
chr2.2 CDS 39171587 39173800 39171587 ID=cds.MS.gene033907.t1;Parent=MS.gene033907.t1
chr2.2 exon 39171341 39171478 39171341 ID=MS.gene033907.t1.exon2;Parent=MS.gene033907.t1
chr2.2 CDS 39171341 39171478 39171341 ID=cds.MS.gene033907.t1;Parent=MS.gene033907.t1
Gene Sequence

>MS.gene033907

ATGGCTGATGGTCCTCCTATATTGATCGATCATCCTTTATTACCCCTTGACGGAGAGCTAGCTGATGGTGCGGCTCGTGTTGACGTTTCGGATTCCGGGACCTTTGAAACAACAAATGCTGTCGCAACAGATAAATTCACGCCTACTATCGGTATGTCTTTTAAATCGGTTGCAGATTGTAAGTCTTTTTACCGTGAATATGCCATGAAACAAGGGTTTGCGATCAAAACTAGAAACTCTAAGAAAGGGGCCGATGGCATGTTAAAATATTTCATTCTAACTTGTGCAAGAGAAGGTCACCATGAATCAAACATACCACCAACTTTGAAGACGAATCCAACGAAGAAACTTGATTGCTCAGCTAAGATAACGGTTGCTTTAAAGAAGGGTCTATGGACTATTTTGTCTTTTAATTCATGTCATAATCATGAGATAAGTCCAACTAAATCACGGTTGTTTGCTGGCAATAAGAAGATTGATATGCATGCACAGCGGACAATTTTGATAAACGATCAGGCAGGTGTACGGGTGAACAAAAGTTTCCGTTCCATGGTATGTGATGCCCGTGGTTACGAAAATCTAACATTTGTGGAGAGAGATGTCAGAAACTTTGTGGCAAAAGAAAGACACCTTCTCGGGAAGGAAGGAGATGGCAGGGCACTTTTATCCTACTTTGCTAGAATGAGGGAATGCAACAAAGACTTTTTCTATGAGATTGACATGGACGAGGACTTTCATGTGCAGAATATTTTCTGGGCTGATGCACGTAGTAGGTCTGCCTATGAATACTTTGGTGATGTTGTCACATTCGATACCACGTACTTGACAAACAAGTATGACATGCCATTTGCCCCGTTTGTTGGTGTCAATCATCATGGGCAATCCATTTTACTAGGTTGCGGTCTTTTATCATTTGAAGATACCAAGTCCTTTACCTGGTTGTTCGAAACATGGCTAAGGTGTATGTCTTCGAGGCCTCCAATAGGAATTGTAACCGATCAGTGCAAGGCTATGCAGAATGCAATTCAGGTTGTGTTTCCTAATACTAGGCATAGGTGGTGTCTATGGCATATAATGAGAAAAATTGCCGAAAAATTGAAAGGATACGCACAATACAAAGGAATAAAAAATGATATGAAAAATTGTGTGTATGATTCTCTGCGGGTTGATGATTTTGTTGTTGGGTGGACAACATTCATTGAAAAATATGGTTTGGGTGAAAATGATTGGTTGAATACCATTTTCGAAGAGCGGGAAAGATGGGTGCCATGTTATTTAAAAAATGATTTCTGGGCCGGAATGTCAACAACACAGAGGAGTGAAAGTATGAATGCTTTTTTCGATGGTTACATTAATGCAAGAACTTCTCTAAGCGAATTTGTAAAGCAATACGACAACGCACTCCAAGACAAGGCTGAAAAGGAATACGAGGTAGATTTTCGGTCTTCAAGCACAATCATTCCATGCGGGTCAAATTCCACAATCGAGAGACAATTTCAAGCCGAGTACACCCATGACAAGTATATGGAGATACAAGTAGAATTTCGTGGGAAATGCAACTGTTATCTCGAAGGTGTGACTACATTGGAATTTACATCTACATACACCGTTTTAGAGGAGAGTATTGTCTGTGGTAAACCGAACGAAACTAAGTATTGTGTTGATTTCAACGGGGAAGACAATAATGTTACGTGCACTTGTTTGCTGTTTGAGTTCAGAGGCATTTTGTGTAGACATGCGCTTTTTGTACTTGGTCATCTTAGAGTGAAAGAGGTTCCGTCTAAATTTATCTTGCCACGATGGAGTAAAAATGTGAAGAGAAAATATGCACACATGAAGACAAGTTACAATGCCAAAAAACTACAACCACACATAGAAAGATTTGAAGGTCTTTGCAAGACATTTTATGAAATTGCAGAATGTGCGGCTGAGACACCTAGTCAAACCTCTGATTTGTATGAAGAAATGATCAAATGGTCTAGCAAGAAGTTGGGCAAAATGAGTTTACAGCCACATTGTGGTGTGGGAGGGGATCATAGCTTAAACACGATGGAGGACTCATTATCACAGCAACCTGATCAACCAATTCTTAATCCGTTAAAAGTACCACGTAAGGGACGTCCTCGAACTAATCGTCGGTTGTCCACCACTGAAAAGATTGTGAAAAAAAGAAGCAAAATGCAAAGAAAAAAACCAATTGTTTCGGTTGTCGAAGTAAGTTGGTGTTAACCTATTATTATTGTGATTACATTTGTTTTTTTAATAATAATACAATGTTAATTATGTTAAATGTAATTAATATTTCACTCTGTAATACTACAGCCTACATTACTTCCTATGTCTGATGGGTTTCAAGCGTCCGGTGATACGCTTAACTACTTCTCATCCCAACAGTCAACTAGTGGTTTTATGTCATTACTTGCATCAATGAGCAAAGATGTGGACGCAGCTGAATTTTAA
Protein sequence

>MS.gene033907.t1

MADGPPILIDHPLLPLDGELADGAARVDVSDSGTFETTNAVATDKFTPTIGMSFKSVADCKSFYREYAMKQGFAIKTRNSKKGADGMLKYFILTCAREGHHESNIPPTLKTNPTKKLDCSAKITVALKKGLWTILSFNSCHNHEISPTKSRLFAGNKKIDMHAQRTILINDQAGVRVNKSFRSMVCDARGYENLTFVERDVRNFVAKERHLLGKEGDGRALLSYFARMRECNKDFFYEIDMDEDFHVQNIFWADARSRSAYEYFGDVVTFDTTYLTNKYDMPFAPFVGVNHHGQSILLGCGLLSFEDTKSFTWLFETWLRCMSSRPPIGIVTDQCKAMQNAIQVVFPNTRHRWCLWHIMRKIAEKLKGYAQYKGIKNDMKNCVYDSLRVDDFVVGWTTFIEKYGLGENDWLNTIFEERERWVPCYLKNDFWAGMSTTQRSESMNAFFDGYINARTSLSEFVKQYDNALQDKAEKEYEVDFRSSSTIIPCGSNSTIERQFQAEYTHDKYMEIQVEFRGKCNCYLEGVTTLEFTSTYTVLEESIVCGKPNETKYCVDFNGEDNNVTCTCLLFEFRGILCRHALFVLGHLRVKEVPSKFILPRWSKNVKRKYAHMKTSYNAKKLQPHIERFEGLCKTFYEIAECAAETPSQTSDLYEEMIKWSSKKLGKMSLQPHCGVGGDHSLNTMEDSLSQQPDQPILNPLKVPRKGRPRTNRRLSTTEKIVKKRSKMQRKKPIVSVVEPTLLPMSDGFQASGDTLNYFSSQQSTSGFMSLLASMSKDVDAAEF