AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene033925

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene033925.t1 MTR_2g047838 98.750 160 2 0 1 160 1 160 4.92e-114 320
MS.gene033925.t1 MTR_8g089310 70.482 166 40 2 1 160 1 163 1.93e-78 231
MS.gene033925.t1 MTR_8g089310 70.482 166 40 2 1 160 14 176 2.07e-78 231
MS.gene033925.t1 MTR_8g089310 70.482 166 40 2 1 160 48 210 4.97e-78 231
MS.gene033925.t1 MTR_4g098500 60.526 114 42 2 2 115 5 115 6.14e-47 149
MS.gene033925.t1 MTR_4g098500 58.621 116 45 1 2 117 31 143 2.72e-46 148
MS.gene033925.t1 MTR_4g088850 43.182 88 50 0 44 131 40 127 1.73e-24 92.4
MS.gene033925.t1 MTR_4g088850 44.737 76 42 0 44 119 40 115 7.38e-22 86.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene033925.t1 AT4G20380 59.302 172 57 4 1 160 6 176 4.02e-55 172
MS.gene033925.t1 AT4G20380 59.302 172 57 4 1 160 6 176 4.02e-55 172
MS.gene033925.t1 AT4G20380 59.302 172 57 4 1 160 1 171 6.21e-55 171
MS.gene033925.t1 AT4G20380 59.302 172 57 4 1 160 1 171 6.21e-55 171
MS.gene033925.t1 AT4G20380 59.302 172 57 4 1 160 1 171 6.21e-55 171
MS.gene033925.t1 AT4G20380 59.302 172 57 4 1 160 1 171 6.21e-55 171
MS.gene033925.t1 AT4G20380 59.302 172 57 4 1 160 1 171 6.21e-55 171
MS.gene033925.t1 AT4G20380 51.515 198 57 4 1 160 1 197 1.75e-51 163
MS.gene033925.t1 AT1G32540 60.177 113 42 2 2 114 65 174 1.27e-45 148
MS.gene033925.t1 AT1G32540 58.772 114 44 1 2 115 32 142 3.99e-45 145
MS.gene033925.t1 AT1G32540 58.772 114 44 1 2 115 32 142 3.99e-45 145
MS.gene033925.t1 AT1G32540 59.459 111 42 1 2 112 32 139 2.52e-44 144
MS.gene033925.t1 AT4G20380 58.400 125 42 3 1 116 1 124 6.33e-42 136
MS.gene033925.t1 AT1G32540 61.039 77 27 2 2 78 65 138 1.10e-27 100
MS.gene033925.t1 AT1G32540 51.515 66 31 1 45 109 66 131 3.51e-14 66.2
MS.gene033925.t1 AT1G32540 59.740 77 28 1 2 78 32 105 3.68e-27 98.6
MS.gene033925.t1 AT1G32540 50.000 68 33 1 45 111 33 100 1.75e-14 65.9
MS.gene033925.t1 AT1G32540 59.740 77 28 1 2 78 32 105 3.68e-27 98.6
MS.gene033925.t1 AT1G32540 50.000 68 33 1 45 111 33 100 1.75e-14 65.9
MS.gene033925.t1 AT4G21610 47.500 80 42 0 43 122 57 136 1.71e-24 93.2
MS.gene033925.t1 AT4G21610 33.750 80 49 1 2 81 58 133 6.13e-11 57.8
MS.gene033925.t1 AT4G21610 45.946 74 40 0 43 116 57 130 6.17e-21 83.6

Find 44 sgRNAs with CRISPR-Local

Find 340 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTTGATTCAAGTGGGAAAT+TGG 0.251370 2.2:-39645902 None:intergenic
TCGGAGCTGGTTGTTTCATT+AGG 0.307392 2.2:+39646100 None:intergenic
GGAGGAAGAACAGGAATAAC+AGG 0.354231 2.2:+39650225 None:intergenic
GGCAGTTCCCACAACGGATA+TGG 0.376956 2.2:+39646882 None:intergenic
GTTATTCCTGTTCTTCCTCC+TGG 0.387766 2.2:-39650222 MS.gene033925:intron
CGGAGCCACATTATGTGTAC+TGG 0.429482 2.2:-39650318 MS.gene033925:CDS
AAGATACCAGGAGGAAGAAC+AGG 0.433787 2.2:+39650216 None:intergenic
AGAAGATACCGTTTCGGAGC+TGG 0.444161 2.2:+39646087 None:intergenic
CAAACATTGCTTGCTCCTCT+AGG 0.449369 2.2:+39650273 None:intergenic
CCACTTGAATCAACGGACAT+AGG 0.456065 2.2:+39645910 None:intergenic
AGGAGTTGGCGGCCTTCCAT+TGG 0.478744 2.2:+39646132 None:intergenic
ATATCCGTTGTGGGAACTGC+CGG 0.504182 2.2:-39646880 MS.gene033925:CDS
TGCAGTAGAAGATACCGTTT+CGG 0.505298 2.2:+39646081 None:intergenic
AAATGAACCATATCCGTTGT+GGG 0.521367 2.2:-39646889 MS.gene033925:CDS
GTTTCATTAGGTGTCAGTAC+AGG 0.522934 2.2:+39646112 None:intergenic
CAATTTCCCACTTGAATCAA+CGG 0.526156 2.2:+39645903 None:intergenic
TTGCTCCTCTAGGGTAAAGC+AGG 0.536954 2.2:+39650283 None:intergenic
GAGGATACATGAGTGTTGTC+CGG 0.538194 2.2:+39646861 None:intergenic
AAACATTGCTTGCTCCTCTA+GGG 0.540478 2.2:+39650274 None:intergenic
GAAATGTCACAACTTTATTG+TGG 0.542581 2.2:-39649158 MS.gene033925:CDS
CAAATGAACCATATCCGTTG+TGG 0.547355 2.2:-39646890 MS.gene033925:CDS
TGAAACAACCAGCTCCGAAA+CGG 0.550490 2.2:-39646095 MS.gene033925:intron
AAGATTTATAGTGTTACAGC+AGG 0.559794 2.2:+39649082 None:intergenic
AACACTATAAATCTTGTGCC+AGG 0.563885 2.2:-39649074 MS.gene033925:intron
TTAGGTGTCAGTACAGGAGT+TGG 0.564205 2.2:+39646118 None:intergenic
GGTGTCAGTACAGGAGTTGG+CGG 0.576256 2.2:+39646121 None:intergenic
ACAACACTCATGTATCCTCA+TGG 0.578970 2.2:-39646857 MS.gene033925:CDS
ATGTCACAACTTTATTGTGG+AGG 0.583864 2.2:-39649155 MS.gene033925:CDS
ACATTATGTGTACTGGGTGT+AGG 0.596546 2.2:-39650311 MS.gene033925:CDS
TCCTGTAGATGACCAATGGA+AGG 0.615310 2.2:-39646144 MS.gene033925:intron
CCTATGTCCGTTGATTCAAG+TGG 0.615696 2.2:-39645910 MS.gene033925:CDS
AACATCCTGCTTTACCCTAG+AGG 0.636037 2.2:-39650288 MS.gene033925:CDS
CTATGTCCGTTGATTCAAGT+GGG 0.636368 2.2:-39645909 MS.gene033925:CDS
CAAACTGCACATTTGACTGA+AGG 0.636685 2.2:+39646830 None:intergenic
TACACCCAGTACACATAATG+TGG 0.639256 2.2:+39650313 None:intergenic
ATTGTCCTGTAGATGACCAA+TGG 0.647818 2.2:-39646148 MS.gene033925:intron
ACAGTTTGGCTCTCAAAGTG+AGG 0.651282 2.2:+39645946 None:intergenic
GGAGCCACATTATGTGTACT+GGG 0.663903 2.2:-39650317 MS.gene033925:CDS
GAGGAAGAACAGGAATAACA+GGG 0.675525 2.2:+39650226 None:intergenic
ACATTGCTAATGCACGCACG+TGG 0.683036 2.2:-39649125 MS.gene033925:CDS
TTGTCCGGCAGTTCCCACAA+CGG 0.690082 2.2:+39646876 None:intergenic
GTTACAGCAGGAACATCTCA+CGG 0.690666 2.2:+39649094 None:intergenic
TTGACTGAAGGAGCTCCATG+AGG 0.723404 2.2:+39646842 None:intergenic
AGGAAGAACAGGAATAACAG+GGG 0.773701 2.2:+39650227 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAACAACAATTAAATT+TGG - chr2.2:39646307-39646326 MS.gene033925:intron 10.0%
!! GTTAAAAAAAAAAAAATCAA+AGG + chr2.2:39646145-39646164 None:intergenic 10.0%
!! TAAAAACAACAATTAAATTT+GGG - chr2.2:39646308-39646327 MS.gene033925:intron 10.0%
!! TTATTTATACATTAAAAGAA+TGG - chr2.2:39646277-39646296 MS.gene033925:intron 10.0%
!! AAAAAAAAAAAATCAAAGGA+AGG + chr2.2:39646141-39646160 None:intergenic 15.0%
!! ATTATAATTATATATCACCA+AGG - chr2.2:39647775-39647794 MS.gene033925:intron 15.0%
!! GATTTAAACTATAAACTAAA+TGG - chr2.2:39646999-39647018 MS.gene033925:intron 15.0%
!! TTCAAAATAATATCAAATTG+TGG + chr2.2:39648428-39648447 None:intergenic 15.0%
!!! ATTTAATTGTTGTTTTTATG+AGG + chr2.2:39646306-39646325 None:intergenic 15.0%
!!! TTTAAAACTAATCTGAATTT+CGG + chr2.2:39649048-39649067 None:intergenic 15.0%
!!! TTTAATTGTTGTTTTTATGA+GGG + chr2.2:39646305-39646324 None:intergenic 15.0%
!! AATAATATTTCCCACTAAAT+TGG + chr2.2:39646262-39646281 None:intergenic 20.0%
!! ATAATATTTCCCACTAAATT+GGG + chr2.2:39646261-39646280 None:intergenic 20.0%
!! ATATTTAAGAAAAGAAAGAC+AGG - chr2.2:39649773-39649792 MS.gene033925:intron 20.0%
!! ATTTAGCCAATTATTAACAA+GGG - chr2.2:39646908-39646927 MS.gene033925:intron 20.0%
!! CATTTGATTAGAATCTTTAA+AGG + chr2.2:39649320-39649339 None:intergenic 20.0%
!! GTTGAAAATCAGAAAATAAT+TGG - chr2.2:39649669-39649688 MS.gene033925:intron 20.0%
!! TATAAAAGCTTGATATAGAT+GGG - chr2.2:39649811-39649830 MS.gene033925:intron 20.0%
!! TATAAATTAAGTGTATACCA+GGG + chr2.2:39647302-39647321 None:intergenic 20.0%
!! TATCAAAATAGAATCTTGAT+TGG + chr2.2:39649562-39649581 None:intergenic 20.0%
!! TATTTAGCCAATTATTAACA+AGG - chr2.2:39646907-39646926 MS.gene033925:intron 20.0%
!! TTAAAACTAATCTGAATTTC+GGG + chr2.2:39649047-39649066 None:intergenic 20.0%
!! TTAACTACAAAAATATTGCA+TGG + chr2.2:39647874-39647893 None:intergenic 20.0%
!! TTATAAATTAAGTGTATACC+AGG + chr2.2:39647303-39647322 None:intergenic 20.0%
!! TTGAAAACAAAAACAGTAAA+AGG + chr2.2:39646035-39646054 None:intergenic 20.0%
!! TTGATTAGGAAAAAAATCAT+AGG + chr2.2:39648944-39648963 None:intergenic 20.0%
!! TTGTAAATATATATCATACC+TGG + chr2.2:39647171-39647190 None:intergenic 20.0%
!!! AAACATATTAAGCTTTTAGA+AGG + chr2.2:39647658-39647677 None:intergenic 20.0%
!!! AAGCAAAGAATTTTTTTTTC+TGG - chr2.2:39648734-39648753 MS.gene033925:intron 20.0%
!!! ACAAAAATTATTGAGTTGAA+TGG + chr2.2:39648181-39648200 None:intergenic 20.0%
!!! AGCAAAGAATTTTTTTTTCT+GGG - chr2.2:39648735-39648754 MS.gene033925:intron 20.0%
!!! GTTTTTGTAGTTTATAGATA+AGG + chr2.2:39648988-39649007 None:intergenic 20.0%
!!! TGTTGAGTTAATTTTTCTAT+TGG + chr2.2:39646442-39646461 None:intergenic 20.0%
!!! TTAATTGTTGTTTTTATGAG+GGG + chr2.2:39646304-39646323 None:intergenic 20.0%
!!! TTCTAAAAGCTTAATATGTT+TGG - chr2.2:39647657-39647676 MS.gene033925:intron 20.0%
! AAAATGCAAAATGTTGACAA+CGG + chr2.2:39650014-39650033 None:intergenic 25.0%
! AAAATTTACGTGTAAACTTC+AGG - chr2.2:39649164-39649183 MS.gene033925:CDS 25.0%
! AAATACACTTAATTCATCGA+TGG - chr2.2:39647267-39647286 MS.gene033925:intron 25.0%
! AAATCATATACCCAATTTAG+TGG - chr2.2:39646248-39646267 MS.gene033925:intron 25.0%
! AATATCTTCTGATTATTCCA+AGG - chr2.2:39647738-39647757 MS.gene033925:intron 25.0%
! AATCATATACCCAATTTAGT+GGG - chr2.2:39646249-39646268 MS.gene033925:intron 25.0%
! AATTAAAATTATGCTGTCCT+TGG + chr2.2:39647758-39647777 None:intergenic 25.0%
! ACAAAAACAAGATAGAATCT+TGG - chr2.2:39649000-39649019 MS.gene033925:intron 25.0%
! ATATCCATAGATGAAGAAAA+TGG + chr2.2:39649225-39649244 None:intergenic 25.0%
! CTAAATTGGGTATATGATTT+CGG + chr2.2:39646248-39646267 None:intergenic 25.0%
! CTATAAAAGCTTGATATAGA+TGG - chr2.2:39649810-39649829 MS.gene033925:intron 25.0%
! GAATGATATTATGATAGTAC+TGG - chr2.2:39648511-39648530 MS.gene033925:intron 25.0%
! GACTAATAACGATCAATATA+GGG + chr2.2:39646874-39646893 None:intergenic 25.0%
! GCTTATTCGTTAAAAAGAAA+TGG + chr2.2:39648870-39648889 None:intergenic 25.0%
! GTAAATTAATTCTGTTGATC+TGG - chr2.2:39649504-39649523 MS.gene033925:intron 25.0%
! TCAGAAGATATTACGTTAAA+TGG + chr2.2:39647730-39647749 None:intergenic 25.0%
! TTAAATTGAAAACTCCTTCT+TGG - chr2.2:39646711-39646730 MS.gene033925:intron 25.0%
!! GAACAAGTGAATTTTTAATC+TGG + chr2.2:39646976-39646995 None:intergenic 25.0%
!! TCAACATTTTGCATTTTATG+TGG - chr2.2:39650017-39650036 MS.gene033925:intron 25.0%
!! TCAACTCAATAATTTTTGTC+CGG - chr2.2:39648182-39648201 MS.gene033925:intron 25.0%
!!! CTATACTTTTGACTTTCTTT+TGG - chr2.2:39650169-39650188 MS.gene033925:intron 25.0%
!!! GCAAAGAATTTTTTTTTCTG+GGG - chr2.2:39648736-39648755 MS.gene033925:intron 25.0%
!!! TAATTGTTGTTTTTATGAGG+GGG + chr2.2:39646303-39646322 None:intergenic 25.0%
AAAACTTACAACTTAATCGC+AGG + chr2.2:39646384-39646403 None:intergenic 30.0%
AAACTAAATGGTTACATCCA+GGG - chr2.2:39647011-39647030 MS.gene033925:intron 30.0%
AAACTCCTTCTTGGAATAAT+CGG - chr2.2:39646720-39646739 MS.gene033925:intron 30.0%
AAACTTACAACTTAATCGCA+GGG + chr2.2:39646383-39646402 None:intergenic 30.0%
AAGATTTATAGTGTTACAGC+AGG + chr2.2:39647145-39647164 None:intergenic 30.0%
AATATTGTACTGTTTAGCGA+AGG - chr2.2:39647465-39647484 MS.gene033925:intron 30.0%
ACTGATTGGATTTGAAGAAT+AGG - chr2.2:39649604-39649623 MS.gene033925:intron 30.0%
AGATAGAATCTTGGTTCATT+TGG - chr2.2:39649009-39649028 MS.gene033925:intron 30.0%
ATGCATCCCTTGTTAATAAT+TGG + chr2.2:39646917-39646936 None:intergenic 30.0%
CATACACAATCAAATAGATG+AGG + chr2.2:39648492-39648511 None:intergenic 30.0%
GAAATGTCACAACTTTATTG+TGG - chr2.2:39647066-39647085 MS.gene033925:intron 30.0%
GAGTATGATGTACATATAGT+TGG + chr2.2:39647402-39647421 None:intergenic 30.0%
GCTAAACAGTACAATATTTG+TGG + chr2.2:39647463-39647482 None:intergenic 30.0%
GGACTAATAACGATCAATAT+AGG + chr2.2:39646875-39646894 None:intergenic 30.0%
GGCTAAATAGACTATAGATA+TGG + chr2.2:39646896-39646915 None:intergenic 30.0%
TAAACTAAATGGTTACATCC+AGG - chr2.2:39647010-39647029 MS.gene033925:intron 30.0%
TATGACAAAAGTTACTCCTT+TGG + chr2.2:39646602-39646621 None:intergenic 30.0%
TCAAATTATCTTTCCCAACA+TGG - chr2.2:39647825-39647844 MS.gene033925:intron 30.0%
TCAACAAAGAGTTGTTAAGT+GGG + chr2.2:39646630-39646649 None:intergenic 30.0%
TCACTTTCATTCAGAAGAAT+GGG - chr2.2:39647570-39647589 MS.gene033925:intron 30.0%
TTAACTAAACACACTAAGCA+TGG + chr2.2:39646079-39646098 None:intergenic 30.0%
TTAGGAAAAAAATCATAGGC+TGG + chr2.2:39648940-39648959 None:intergenic 30.0%
TTCACTTTCATTCAGAAGAA+TGG - chr2.2:39647569-39647588 MS.gene033925:intron 30.0%
TTCGTTAAAAAGAAATGGAG+AGG + chr2.2:39648865-39648884 None:intergenic 30.0%
TTGGAATTGAAACAGATCAA+GGG + chr2.2:39648591-39648610 None:intergenic 30.0%
! AGTTCCATTTTCTTCATCTA+TGG - chr2.2:39649218-39649237 MS.gene033925:intron 30.0%
! CTTTTTAACGAATAAGCAGT+TGG - chr2.2:39648873-39648892 MS.gene033925:intron 30.0%
! GATTTTCTACTACTACAGTT+TGG + chr2.2:39650295-39650314 None:intergenic 30.0%
! GCTAAAGATTTTAGACTGAT+TGG - chr2.2:39649590-39649609 MS.gene033925:intron 30.0%
! GTTGTAAGTTTTTGCAGTAA+TGG - chr2.2:39646392-39646411 MS.gene033925:intron 30.0%
!! GTTGTTTACTGACTTATTGT+TGG - chr2.2:39649289-39649308 MS.gene033925:intron 30.0%
!! TCAGATTACGTCATTTTGTT+CGG - chr2.2:39649692-39649711 MS.gene033925:intron 30.0%
!!! AATGCTACACTAGTTTTCAT+CGG + chr2.2:39646535-39646554 None:intergenic 30.0%
AAATGAACCATATCCGTTGT+GGG - chr2.2:39649335-39649354 MS.gene033925:intron 35.0%
AACAACTTAGCATGCATGAT+TGG + chr2.2:39649275-39649294 None:intergenic 35.0%
AACACTATAAATCTTGTGCC+AGG - chr2.2:39647150-39647169 MS.gene033925:intron 35.0%
AAGGATATTAAGGATGACAG+TGG + chr2.2:39648037-39648056 None:intergenic 35.0%
ACAGTAAAAGGAAAGATACC+AGG + chr2.2:39646023-39646042 None:intergenic 35.0%
ACCTTCAATACATAAACGCA+TGG + chr2.2:39646766-39646785 None:intergenic 35.0%
ACGGATATCAAGTAAATTGC+AGG + chr2.2:39649995-39650014 None:intergenic 35.0%
ACTCGGGGATACAAAAAATT+AGG + chr2.2:39648347-39648366 None:intergenic 35.0%
AGACTGTTTGATGCCATATA+AGG + chr2.2:39648370-39648389 None:intergenic 35.0%
AGATAAGGAATTACTGCAAG+TGG + chr2.2:39648973-39648992 None:intergenic 35.0%
AGGATATTAAGGATGACAGT+GGG + chr2.2:39648036-39648055 None:intergenic 35.0%
ATCCACATAGCTCAATAATG+AGG - chr2.2:39649127-39649146 MS.gene033925:CDS 35.0%
ATCTTTCCCAACATGGTATT+CGG - chr2.2:39647832-39647851 MS.gene033925:intron 35.0%
ATGTCACAACTTTATTGTGG+AGG - chr2.2:39647069-39647088 MS.gene033925:intron 35.0%
ATTAAGTGTATACCAGGGTT+TGG + chr2.2:39647297-39647316 None:intergenic 35.0%
ATTGCATACTTAGACTAAGC+AGG - chr2.2:39646103-39646122 MS.gene033925:CDS 35.0%
CAACAAAGAGTTGTTAAGTG+GGG + chr2.2:39646629-39646648 None:intergenic 35.0%
CAATTTCCCACTTGAATCAA+CGG + chr2.2:39650324-39650343 None:intergenic 35.0%
CTTCTTGTCTGATCCAAATT+AGG - chr2.2:39646822-39646841 MS.gene033925:CDS 35.0%
CTTGGAATTGAAACAGATCA+AGG + chr2.2:39648592-39648611 None:intergenic 35.0%
GATCTTTAACTCTCGTATCA+TGG - chr2.2:39648671-39648690 MS.gene033925:intron 35.0%
GCATATCATCAACTTACCAA+AGG - chr2.2:39646583-39646602 MS.gene033925:intron 35.0%
GGAATAACAAACTGAACCTA+TGG + chr2.2:39648407-39648426 None:intergenic 35.0%
GTACAATATTTGTGGAGAGT+AGG + chr2.2:39647455-39647474 None:intergenic 35.0%
GTCAACAAAGAGTTGTTAAG+TGG + chr2.2:39646631-39646650 None:intergenic 35.0%
TACTGGTATCAAGACAGTAA+AGG - chr2.2:39648528-39648547 MS.gene033925:intron 35.0%
TCAAACAGTCTCTTCAAGAA+TGG - chr2.2:39648379-39648398 MS.gene033925:intron 35.0%
TCCACATAGCTCAATAATGA+GGG - chr2.2:39649128-39649147 MS.gene033925:CDS 35.0%
TCCATGCGTTTATGTATTGA+AGG - chr2.2:39646762-39646781 MS.gene033925:intron 35.0%
TCGATGTAAGTGTACATTGA+TGG - chr2.2:39649434-39649453 MS.gene033925:intron 35.0%
TGATCCAAATTAGGATCTAG+AGG - chr2.2:39646831-39646850 MS.gene033925:CDS 35.0%
TGATGATTGTGGAGTTGTTA+AGG + chr2.2:39648640-39648659 None:intergenic 35.0%
TGCGTTTATGTATTGAAGGT+AGG - chr2.2:39646766-39646785 MS.gene033925:intron 35.0%
TGTCTAAGCAATGATGATTG+TGG + chr2.2:39648651-39648670 None:intergenic 35.0%
TTAGGATTCTGGTACTTGTA+TGG - chr2.2:39649912-39649931 MS.gene033925:intron 35.0%
TTATATATCACCAAGGTGTG+TGG - chr2.2:39647782-39647801 MS.gene033925:intron 35.0%
TTGCATACTTAGACTAAGCA+GGG - chr2.2:39646104-39646123 MS.gene033925:CDS 35.0%
TTTGATGCCATATAAGGACT+CGG + chr2.2:39648364-39648383 None:intergenic 35.0%
! AAAAAGGGTTGACTTTCGAT+TGG - chr2.2:39647596-39647615 MS.gene033925:intron 35.0%
! AAACTTCCAAGGTATCAAAG+TGG + chr2.2:39648247-39648266 None:intergenic 35.0%
! ATCAGGAAATTTTAGATCCC+TGG + chr2.2:39647031-39647050 None:intergenic 35.0%
! CACCAAAAAGCATATGAAGA+TGG + chr2.2:39646561-39646580 None:intergenic 35.0%
! GCAAGTGGATGATATTGATT+AGG + chr2.2:39648958-39648977 None:intergenic 35.0%
! GGTTTTTGTACACACAATGA+TGG - chr2.2:39648275-39648294 MS.gene033925:intron 35.0%
! TACCTTGGAAGTTTCACTTT+TGG - chr2.2:39648253-39648272 MS.gene033925:intron 35.0%
! TCATATCTTTTACCCTTTCC+TGG - chr2.2:39650053-39650072 MS.gene033925:intron 35.0%
!! ACCTTGGAAGTTTCACTTTT+GGG - chr2.2:39648254-39648273 MS.gene033925:intron 35.0%
!! CAGATTACGTCATTTTGTTC+GGG - chr2.2:39649693-39649712 MS.gene033925:intron 35.0%
!!! ATGCTACACTAGTTTTCATC+GGG + chr2.2:39646534-39646553 None:intergenic 35.0%
!!! ATTTTTGTCCGGCCTTATTT+AGG - chr2.2:39648193-39648212 MS.gene033925:intron 35.0%
AAACATTGCTTGCTCCTCTA+GGG + chr2.2:39645953-39645972 None:intergenic 40.0%
AAGACTCAACCAACACAGTA+TGG + chr2.2:39648320-39648339 None:intergenic 40.0%
AATCAAAGGAAGGATCAACG+CGG + chr2.2:39646131-39646150 None:intergenic 40.0%
ACAACACTCATGTATCCTCA+TGG - chr2.2:39649367-39649386 MS.gene033925:intron 40.0%
ACACAGTATGGGTGAAAACA+AGG + chr2.2:39648308-39648327 None:intergenic 40.0%
ACATTATGTGTACTGGGTGT+AGG - chr2.2:39645913-39645932 MS.gene033925:CDS 40.0%
ACCCAAAAGTGAAACTTCCA+AGG + chr2.2:39648258-39648277 None:intergenic 40.0%
AGACTCAACCAACACAGTAT+GGG + chr2.2:39648319-39648338 None:intergenic 40.0%
AGGAAGAACAGGAATAACAG+GGG + chr2.2:39646000-39646019 None:intergenic 40.0%
ATAGCTGAAATACACCGCAA+GGG + chr2.2:39647349-39647368 None:intergenic 40.0%
ATGGATCCGAATACCATGTT+GGG + chr2.2:39647841-39647860 None:intergenic 40.0%
ATTGCATGGTCCATCAAGTA+TGG + chr2.2:39647860-39647879 None:intergenic 40.0%
ATTGTCCTGTAGATGACCAA+TGG - chr2.2:39650076-39650095 MS.gene033925:intron 40.0%
ATTGTGGAGTTGTTAAGGAG+CGG + chr2.2:39648635-39648654 None:intergenic 40.0%
CAAACTGCACATTTGACTGA+AGG + chr2.2:39649397-39649416 None:intergenic 40.0%
CAAATGAACCATATCCGTTG+TGG - chr2.2:39649334-39649353 MS.gene033925:intron 40.0%
CAAGTAAATTGCAGGCATAG+AGG + chr2.2:39649987-39650006 None:intergenic 40.0%
CAATGCAGAGGAAAGAGAAA+AGG + chr2.2:39647961-39647980 None:intergenic 40.0%
CACAGTATGGGTGAAAACAA+GGG + chr2.2:39648307-39648326 None:intergenic 40.0%
CAGAAGAATGGGAGCAAAAA+GGG - chr2.2:39647581-39647600 MS.gene033925:intron 40.0%
CCAAATTAGGATCTAGAGGT+TGG - chr2.2:39646835-39646854 MS.gene033925:CDS 40.0%
CCAACCTCTAGATCCTAATT+TGG + chr2.2:39646838-39646857 None:intergenic 40.0%
CGTGTAAACTTCAGGATGTT+TGG - chr2.2:39649172-39649191 MS.gene033925:intron 40.0%
CTCTTCAAGAATGGTTCCAT+AGG - chr2.2:39648388-39648407 MS.gene033925:intron 40.0%
GAAAAGAAAGACAGGATCGT+AGG - chr2.2:39649781-39649800 MS.gene033925:intron 40.0%
GAGGAAGAACAGGAATAACA+GGG + chr2.2:39646001-39646020 None:intergenic 40.0%
GGATATTAAGGATGACAGTG+GGG + chr2.2:39648035-39648054 None:intergenic 40.0%
GGTTTCTATCTGGTTGTCAA+GGG - chr2.2:39648148-39648167 MS.gene033925:intron 40.0%
GTAAAAGGAAAGATACCAGG+AGG + chr2.2:39646020-39646039 None:intergenic 40.0%
GTATTCGGATCCATACTTGA+TGG - chr2.2:39647847-39647866 MS.gene033925:intron 40.0%
GTCCACATTTCAAACCCAAA+GGG + chr2.2:39647537-39647556 None:intergenic 40.0%
GTGTAAAAGCTGTACAGATC+TGG + chr2.2:39647204-39647223 None:intergenic 40.0%
GTGTGGTATAGTTGAGACAT+AGG - chr2.2:39647799-39647818 MS.gene033925:intron 40.0%
GTTTCATTAGGTGTCAGTAC+AGG + chr2.2:39650115-39650134 None:intergenic 40.0%
TACACCCAGTACACATAATG+TGG + chr2.2:39645914-39645933 None:intergenic 40.0%
TACACTGAGCACAGTAGATA+GGG + chr2.2:39647925-39647944 None:intergenic 40.0%
TATAGCTGAAATACACCGCA+AGG + chr2.2:39647350-39647369 None:intergenic 40.0%
TATGGATCCGAATACCATGT+TGG + chr2.2:39647842-39647861 None:intergenic 40.0%
TCAGAAGAATGGGAGCAAAA+AGG - chr2.2:39647580-39647599 MS.gene033925:intron 40.0%
TGCAGTAGAAGATACCGTTT+CGG + chr2.2:39650146-39650165 None:intergenic 40.0%
TGGACACGCTAAGGATATTA+AGG + chr2.2:39648047-39648066 None:intergenic 40.0%
TGGATCCGATTATTCCAAGA+AGG + chr2.2:39646728-39646747 None:intergenic 40.0%
TGGTTTCTATCTGGTTGTCA+AGG - chr2.2:39648147-39648166 MS.gene033925:intron 40.0%
TTGACAACCAGATAGAAACC+AGG + chr2.2:39648148-39648167 None:intergenic 40.0%
TTGATGCCATATAAGGACTC+GGG + chr2.2:39648363-39648382 None:intergenic 40.0%
TTGTTCGGGCTTCAATTTGT+TGG - chr2.2:39649707-39649726 MS.gene033925:intron 40.0%
! AACCACCCAACTATTGGTTA+TGG - chr2.2:39648838-39648857 MS.gene033925:intron 40.0%
! AACCCTTTGGGTTTGAAATG+TGG - chr2.2:39647532-39647551 MS.gene033925:intron 40.0%
! ACCACCCAACTATTGGTTAT+GGG - chr2.2:39648839-39648858 MS.gene033925:intron 40.0%
! AGTTTTTGATACCATGCCCA+CGG - chr2.2:39647627-39647646 MS.gene033925:intron 40.0%
! ATTTGTCTGAGATGTGTCCA+TGG - chr2.2:39648694-39648713 MS.gene033925:intron 40.0%
! CAAGGTATCAAAGTGGCTTT+GGG + chr2.2:39648240-39648259 None:intergenic 40.0%
! CGCCATCTTCATATGCTTTT+TGG - chr2.2:39646556-39646575 MS.gene033925:intron 40.0%
! TGTTCGGGCTTCAATTTGTT+GGG - chr2.2:39649708-39649727 MS.gene033925:intron 40.0%
! TGTTTTCACCCATACTGTGT+TGG - chr2.2:39648308-39648327 MS.gene033925:intron 40.0%
!! CTATGTCCGTTGATTCAAGT+GGG - chr2.2:39650315-39650334 MS.gene033925:CDS 40.0%
!! GATCTAGAGGTTGGTAAAGA+TGG - chr2.2:39646844-39646863 MS.gene033925:CDS 40.0%
!!! ACTAGTTTTCATCGGGAATG+AGG + chr2.2:39646527-39646546 None:intergenic 40.0%
AAAACGTGAGTTTCGAACCC+AGG - chr2.2:39646182-39646201 MS.gene033925:intron 45.0%
AAAGAGAAAAGGCTACACCG+AGG + chr2.2:39647950-39647969 None:intergenic 45.0%
AAAGTGAGGTCTTGACTGCA+GGG + chr2.2:39650267-39650286 None:intergenic 45.0%
AAATTTCCTGATGTGCCTGC+AGG - chr2.2:39647039-39647058 MS.gene033925:intron 45.0%
AACAGAAACCTTGCAGGATG+TGG + chr2.2:39648110-39648129 None:intergenic 45.0%
AACATCCTGCTTTACCCTAG+AGG - chr2.2:39645936-39645955 MS.gene033925:CDS 45.0%
AAGATACCAGGAGGAAGAAC+AGG + chr2.2:39646011-39646030 None:intergenic 45.0%
AAGGACACACACAATCTCAG+GGG - chr2.2:39648794-39648813 MS.gene033925:intron 45.0%
AAGGTTTCTGTTCCCTTGCT+TGG - chr2.2:39648118-39648137 MS.gene033925:intron 45.0%
ACAAGGACACACACAATCTC+AGG - chr2.2:39648792-39648811 MS.gene033925:intron 45.0%
AGAGGCCCATAACCAATAGT+TGG + chr2.2:39648847-39648866 None:intergenic 45.0%
ATCAAAGGAAGGATCAACGC+GGG + chr2.2:39646130-39646149 None:intergenic 45.0%
ATCAAATAGATGAGGCCCCA+AGG + chr2.2:39648484-39648503 None:intergenic 45.0%
ATCGATGGTATACCAAACCC+TGG - chr2.2:39647282-39647301 MS.gene033925:intron 45.0%
ATTAAGGATGACAGTGGGGT+AGG + chr2.2:39648031-39648050 None:intergenic 45.0%
ATTTGTGGAGAGTAGGTCAC+TGG + chr2.2:39647448-39647467 None:intergenic 45.0%
CAAACATTGCTTGCTCCTCT+AGG + chr2.2:39645954-39645973 None:intergenic 45.0%
CAAGGACACACACAATCTCA+GGG - chr2.2:39648793-39648812 MS.gene033925:intron 45.0%
CAAGGGGAAAGAAGAAAGGA+AGG + chr2.2:39647332-39647351 None:intergenic 45.0%
CAGACTTCTCGAAAGTAGCT+TGG + chr2.2:39648610-39648629 None:intergenic 45.0%
CCACTTGAATCAACGGACAT+AGG + chr2.2:39650317-39650336 None:intergenic 45.0%
CCCTTGTGCAAAAACCCTTT+GGG - chr2.2:39647520-39647539 MS.gene033925:intron 45.0%
CGTCCACATTTCAAACCCAA+AGG + chr2.2:39647538-39647557 None:intergenic 45.0%
CTACAGGACAATCCAGGAAA+GGG + chr2.2:39650068-39650087 None:intergenic 45.0%
CTCAACTATACCACACACCT+TGG + chr2.2:39647795-39647814 None:intergenic 45.0%
GAGGCCCATAACCAATAGTT+GGG + chr2.2:39648846-39648865 None:intergenic 45.0%
GCCCTCATTATTGAGCTATG+TGG + chr2.2:39649132-39649151 None:intergenic 45.0%
GCTAACAACCACCCAACTAT+TGG - chr2.2:39648832-39648851 MS.gene033925:intron 45.0%
GGAAAAACCAACAGCCAAAG+TGG + chr2.2:39646421-39646440 None:intergenic 45.0%
GGAGCCACATTATGTGTACT+GGG - chr2.2:39645907-39645926 MS.gene033925:CDS 45.0%
GGAGGAAGAACAGGAATAAC+AGG + chr2.2:39646002-39646021 None:intergenic 45.0%
GTACACTGAGCACAGTAGAT+AGG + chr2.2:39647926-39647945 None:intergenic 45.0%
GTGTAGCACTTAGCAGTAGA+AGG + chr2.2:39648460-39648479 None:intergenic 45.0%
GTTACAGCAGGAACATCTCA+CGG + chr2.2:39647133-39647152 None:intergenic 45.0%
GTTATTCCTGTTCTTCCTCC+TGG - chr2.2:39646002-39646021 MS.gene033925:intron 45.0%
TAGCTGAAATACACCGCAAG+GGG + chr2.2:39647348-39647367 None:intergenic 45.0%
TCCTGTAGATGACCAATGGA+AGG - chr2.2:39650080-39650099 MS.gene033925:intron 45.0%
TCCTTTCTTCTTTCCCCTTG+CGG - chr2.2:39647332-39647351 MS.gene033925:intron 45.0%
TCGTACAAGTGTCAGACACA+AGG - chr2.2:39648775-39648794 MS.gene033925:intron 45.0%
TCTACAGGACAATCCAGGAA+AGG + chr2.2:39650069-39650088 None:intergenic 45.0%
TCTCTTTCCTCTGCATTGCT+TGG - chr2.2:39647963-39647982 MS.gene033925:intron 45.0%
TGAAACAACCAGCTCCGAAA+CGG - chr2.2:39650129-39650148 MS.gene033925:intron 45.0%
TGATGCCATATAAGGACTCG+GGG + chr2.2:39648362-39648381 None:intergenic 45.0%
TGTATCCCCGAGTCCTTATA+TGG - chr2.2:39648354-39648373 MS.gene033925:intron 45.0%
TGTGACATTTCCATTCCTGC+AGG + chr2.2:39647057-39647076 None:intergenic 45.0%
TTACAACTTAATCGCAGGGC+CGG + chr2.2:39646379-39646398 None:intergenic 45.0%
TTAGGTGTCAGTACAGGAGT+TGG + chr2.2:39650109-39650128 None:intergenic 45.0%
TTGTGGAGTTGTTAAGGAGC+GGG + chr2.2:39648634-39648653 None:intergenic 45.0%
TTTCCTCTGCATTGCTTGGT+GGG - chr2.2:39647967-39647986 MS.gene033925:intron 45.0%
! ACCCAAAGGGTTTTTGCACA+AGG + chr2.2:39647524-39647543 None:intergenic 45.0%
! AGGGTTGACTTTCGATTGGT+TGG - chr2.2:39647600-39647619 MS.gene033925:intron 45.0%
! CAAGCTACTTTCGAGAAGTC+TGG - chr2.2:39648608-39648627 MS.gene033925:intron 45.0%
! CCAAAGCCACTTTGATACCT+TGG - chr2.2:39648238-39648257 MS.gene033925:intron 45.0%
! CCAAAGGGTTTTTGCACAAG+GGG + chr2.2:39647522-39647541 None:intergenic 45.0%
! CCAAGGTATCAAAGTGGCTT+TGG + chr2.2:39648241-39648260 None:intergenic 45.0%
! CCCAAAGGGTTTTTGCACAA+GGG + chr2.2:39647523-39647542 None:intergenic 45.0%
! GAGGATACATGAGTGTTGTC+CGG + chr2.2:39649366-39649385 None:intergenic 45.0%
! GTTTGAAATGTGGACGTGGT+GGG - chr2.2:39647542-39647561 MS.gene033925:intron 45.0%
! GTTTTTGATACCATGCCCAC+GGG - chr2.2:39647628-39647647 MS.gene033925:intron 45.0%
! TCGGAGCTGGTTGTTTCATT+AGG + chr2.2:39650127-39650146 None:intergenic 45.0%
! TTGGGTTTGAAATGTGGACG+TGG - chr2.2:39647538-39647557 MS.gene033925:intron 45.0%
! TTTGAAATGTGGACGTGGTG+GGG - chr2.2:39647543-39647562 MS.gene033925:intron 45.0%
! TTTGGGCCCTCCAAATTTTG+TGG - chr2.2:39646325-39646344 MS.gene033925:intron 45.0%
!! ACAGTTTGGCTCTCAAAGTG+AGG + chr2.2:39650281-39650300 None:intergenic 45.0%
!! ATATGATTTCGGTGCTGCAG+TGG + chr2.2:39646237-39646256 None:intergenic 45.0%
!! CCTATGTCCGTTGATTCAAG+TGG - chr2.2:39650314-39650333 MS.gene033925:CDS 45.0%
!! CTTTTAGAAGGTTTGCCCGT+GGG + chr2.2:39647646-39647665 None:intergenic 45.0%
!! TGCAGTAATGGATGCCACTT+TGG - chr2.2:39646404-39646423 MS.gene033925:intron 45.0%
AAACCAGGTGCACCAAGCAA+GGG + chr2.2:39648133-39648152 None:intergenic 50.0%
AATTATGTCCCCCGTGACCT+GGG + chr2.2:39646202-39646221 None:intergenic 50.0%
ACATTGCTAATGCACGCACG+TGG - chr2.2:39647099-39647118 MS.gene033925:intron 50.0%
ACCGCAAGGGGAAAGAAGAA+AGG + chr2.2:39647336-39647355 None:intergenic 50.0%
ACTGTGCTCAGTGTACACCT+CGG - chr2.2:39647930-39647949 MS.gene033925:intron 50.0%
AGAAACCTTGCAGGATGTGG+TGG + chr2.2:39648107-39648126 None:intergenic 50.0%
AGAAGATACCGTTTCGGAGC+TGG + chr2.2:39650140-39650159 None:intergenic 50.0%
ATATCCGTTGTGGGAACTGC+CGG - chr2.2:39649344-39649363 MS.gene033925:intron 50.0%
CAAAGTGAGGTCTTGACTGC+AGG + chr2.2:39650268-39650287 None:intergenic 50.0%
CAAGGGAACAGAAACCTTGC+AGG + chr2.2:39648116-39648135 None:intergenic 50.0%
CATGGACACACATACGTGTG+TGG + chr2.2:39646748-39646767 None:intergenic 50.0%
CCAGGGCCACAAAATTTGGA+GGG + chr2.2:39646334-39646353 None:intergenic 50.0%
CCCCTTGTGCAAAAACCCTT+TGG - chr2.2:39647519-39647538 MS.gene033925:intron 50.0%
CGGAGCCACATTATGTGTAC+TGG - chr2.2:39645906-39645925 MS.gene033925:CDS 50.0%
CTCATGACAGTCGCGTGTTA+TGG + chr2.2:39649950-39649969 None:intergenic 50.0%
CTTTCCTCTGCATTGCTTGG+TGG - chr2.2:39647966-39647985 MS.gene033925:intron 50.0%
GCCAGCTAAGGGCCTAAATA+AGG + chr2.2:39648208-39648227 None:intergenic 50.0%
GCCCATAACCAATAGTTGGG+TGG + chr2.2:39648843-39648862 None:intergenic 50.0%
GCCTTCCATTGGTCATCTAC+AGG + chr2.2:39650084-39650103 None:intergenic 50.0%
GCTAAGGGCCTAAATAAGGC+CGG + chr2.2:39648204-39648223 None:intergenic 50.0%
GCTTCATTTGCAGCACACCA+TGG + chr2.2:39648075-39648094 None:intergenic 50.0%
GGCCTGATTGCACTTGCTTT+GGG - chr2.2:39646353-39646372 MS.gene033925:intron 50.0%
GGTCATCTACAGGACAATCC+AGG + chr2.2:39650074-39650093 None:intergenic 50.0%
TAATTATGTCCCCCGTGACC+TGG + chr2.2:39646203-39646222 None:intergenic 50.0%
TGAGCACAGTAGATAGGGCA+GGG + chr2.2:39647920-39647939 None:intergenic 50.0%
TGAGTTTCGAACCCAGGTCA+CGG - chr2.2:39646188-39646207 MS.gene033925:intron 50.0%
TGCTAAGTGCTACACGCCTT+GGG - chr2.2:39648465-39648484 MS.gene033925:intron 50.0%
TGGGGCTGTAGAGTTACTGT+TGG - chr2.2:39647986-39648005 MS.gene033925:intron 50.0%
TGGTGCACCTGGTTTCTATC+TGG - chr2.2:39648138-39648157 MS.gene033925:intron 50.0%
TTGACTGAAGGAGCTCCATG+AGG + chr2.2:39649385-39649404 None:intergenic 50.0%
! CCTCCAAATTTTGTGGCCCT+GGG - chr2.2:39646332-39646351 MS.gene033925:intron 50.0%
! GATGTGTCCATGGAGTGCTA+AGG - chr2.2:39648704-39648723 MS.gene033925:intron 50.0%
! GGTTTGAAATGTGGACGTGG+TGG - chr2.2:39647541-39647560 MS.gene033925:intron 50.0%
! TGATTGCACTTGCTTTGGGC+CGG - chr2.2:39646357-39646376 MS.gene033925:intron 50.0%
! TTCCTCTGCATTGCTTGGTG+GGG - chr2.2:39647968-39647987 MS.gene033925:intron 50.0%
!! ATGGATGCCACTTTGGCTGT+TGG - chr2.2:39646411-39646430 MS.gene033925:intron 50.0%
!! GCCTTATTTAGGCCCTTAGC+TGG - chr2.2:39648204-39648223 MS.gene033925:intron 50.0%
!! GCTTTTAGAAGGTTTGCCCG+TGG + chr2.2:39647647-39647666 None:intergenic 50.0%
!! TTGCTCCTCTAGGGTAAAGC+AGG + chr2.2:39645944-39645963 None:intergenic 50.0%
AAGCAAGTGCAATCAGGCCC+AGG + chr2.2:39646352-39646371 None:intergenic 55.0%
ACACGCGACTGTCATGAGCA+CGG - chr2.2:39649952-39649971 MS.gene033925:intron 55.0%
AGCAAGTGCAATCAGGCCCA+GGG + chr2.2:39646351-39646370 None:intergenic 55.0%
AGGCCCAGGGCCACAAAATT+TGG + chr2.2:39646338-39646357 None:intergenic 55.0%
AGTTTCGAACCCAGGTCACG+GGG - chr2.2:39646190-39646209 MS.gene033925:intron 55.0%
ATGGTGCACTGGACACGCTA+AGG + chr2.2:39648056-39648075 None:intergenic 55.0%
CCCAGGGCCACAAAATTTGG+AGG + chr2.2:39646335-39646354 None:intergenic 55.0%
CGACACACCTTAGCACTCCA+TGG + chr2.2:39648714-39648733 None:intergenic 55.0%
CTGAGCACAGTAGATAGGGC+AGG + chr2.2:39647921-39647940 None:intergenic 55.0%
CTGCTAAGTGCTACACGCCT+TGG - chr2.2:39648464-39648483 MS.gene033925:intron 55.0%
GAAACCAGGTGCACCAAGCA+AGG + chr2.2:39648134-39648153 None:intergenic 55.0%
GAGCACAGTAGATAGGGCAG+GGG + chr2.2:39647919-39647938 None:intergenic 55.0%
GAGTTTCGAACCCAGGTCAC+GGG - chr2.2:39646189-39646208 MS.gene033925:intron 55.0%
GCTAAGTGCTACACGCCTTG+GGG - chr2.2:39648466-39648485 MS.gene033925:intron 55.0%
GGCAGTTCCCACAACGGATA+TGG + chr2.2:39649345-39649364 None:intergenic 55.0%
GGCCCAAAGCAAGTGCAATC+AGG + chr2.2:39646358-39646377 None:intergenic 55.0%
GGGCCTGATTGCACTTGCTT+TGG - chr2.2:39646352-39646371 MS.gene033925:intron 55.0%
GGTGTCAGTACAGGAGTTGG+CGG + chr2.2:39650106-39650125 None:intergenic 55.0%
GTGTACCACCACATCCTGCA+AGG - chr2.2:39648099-39648118 MS.gene033925:intron 55.0%
TCCATTCCTGCAGGCACATC+AGG + chr2.2:39647048-39647067 None:intergenic 55.0%
TCCTGATGTGCCTGCAGGAA+TGG - chr2.2:39647044-39647063 MS.gene033925:intron 55.0%
TTAGCGTGTCCAGTGCACCA+TGG - chr2.2:39648055-39648074 MS.gene033925:intron 55.0%
TTGTCCGGCAGTTCCCACAA+CGG + chr2.2:39649351-39649370 None:intergenic 55.0%
! CCCTCCAAATTTTGTGGCCC+TGG - chr2.2:39646331-39646350 MS.gene033925:intron 55.0%
!! AAGTGGCTTTGGGCAAGTGC+TGG + chr2.2:39648230-39648249 None:intergenic 55.0%
AGAAGGTTTGCCCGTGGGCA+TGG + chr2.2:39647641-39647660 None:intergenic 60.0%
AGCCCCACCAAGCAATGCAG+AGG + chr2.2:39647973-39647992 None:intergenic 60.0%
AGGAGTTGGCGGCCTTCCAT+TGG + chr2.2:39650095-39650114 None:intergenic 60.0%
CACGCGACTGTCATGAGCAC+GGG - chr2.2:39649953-39649972 MS.gene033925:intron 60.0%
GTTTCGAACCCAGGTCACGG+GGG - chr2.2:39646191-39646210 MS.gene033925:intron 60.0%
TGCAGCACACCATGGTGCAC+TGG + chr2.2:39648067-39648086 None:intergenic 60.0%
!! GGCAAGTGCTGGCCAGCTAA+GGG + chr2.2:39648219-39648238 None:intergenic 60.0%
!! GTTCCCTTGCTTGGTGCACC+TGG - chr2.2:39648127-39648146 MS.gene033925:intron 60.0%
!! GGGCAAGTGCTGGCCAGCTA+AGG + chr2.2:39648220-39648239 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 39645903 39650343 39645903 ID=MS.gene033925
chr2.2 mRNA 39645903 39650343 39645903 ID=MS.gene033925.t1;Parent=MS.gene033925
chr2.2 exon 39650223 39650343 39650223 ID=MS.gene033925.t1.exon1;Parent=MS.gene033925.t1
chr2.2 CDS 39650223 39650343 39650223 ID=cds.MS.gene033925.t1;Parent=MS.gene033925.t1
chr2.2 exon 39649075 39649185 39649075 ID=MS.gene033925.t1.exon2;Parent=MS.gene033925.t1
chr2.2 CDS 39649075 39649185 39649075 ID=cds.MS.gene033925.t1;Parent=MS.gene033925.t1
chr2.2 exon 39646808 39646920 39646808 ID=MS.gene033925.t1.exon3;Parent=MS.gene033925.t1
chr2.2 CDS 39646808 39646920 39646808 ID=cds.MS.gene033925.t1;Parent=MS.gene033925.t1
chr2.2 exon 39646096 39646158 39646096 ID=MS.gene033925.t1.exon4;Parent=MS.gene033925.t1
chr2.2 CDS 39646096 39646158 39646096 ID=cds.MS.gene033925.t1;Parent=MS.gene033925.t1
chr2.2 exon 39645903 39645974 39645903 ID=MS.gene033925.t1.exon5;Parent=MS.gene033925.t1
chr2.2 CDS 39645903 39645974 39645903 ID=cds.MS.gene033925.t1;Parent=MS.gene033925.t1
Gene Sequence

>MS.gene033925

ATGCGGAGCCACATTATGTGTACTGGGTGTAGGAACATCCTGCTTTACCCTAGAGGAGCAAGCAATGTTTGCTGTGCAGTGTGCAGCACAATTACCCCTGTTATTCCTGTTCTTCCTCCTGGTATCTTTCCTTTTACTGTTTTTGTTTTCAATATTTCAAGAATTTTCTTGCTCCATGCTTAGTGTGTTTAGTTAATTTGATTGCATACTTAGACTAAGCAGGGCCCGCGTTGATCCTTCCTTTGATTTTTTTTTTTTTAACAGAAAATGTAATATTGCAAAACGTGAGTTTCGAACCCAGGTCACGGGGGACATAATTAAAACGCATTTACCACTGCAGCACCGAAATCATATACCCAATTTAGTGGGAAATATTATTTATACATTAAAAGAATGGCCCCCTCATAAAAACAACAATTAAATTTGGGCCCTCCAAATTTTGTGGCCCTGGGCCTGATTGCACTTGCTTTGGGCCGGCCCTGCGATTAAGTTGTAAGTTTTTGCAGTAATGGATGCCACTTTGGCTGTTGGTTTTTCCAATAGAAAAATTAACTCAACAATACTAGTTTTGTTCATAATTGAACTCAAGTTCTATAAAATAGTTCAACTGCTATCATGATTCCTCATTCCCGATGAAAACTAGTGTAGCATTTCGCCATCTTCATATGCTTTTTGGTGTAGCATATCATCAACTTACCAAAGGAGTAACTTTTGTCATACTTGCCCCACTTAACAACTCTTTGTTGACGTTAAATATTGTAATTTTTTTAGTTGATATTTAGTTATATTTTAAAAAGTATATTATACATTAAATTGAAAACTCCTTCTTGGAATAATCGGATCCACACACGTATGTGTGTCCATGCGTTTATGTATTGAAGGTAGGATATTCTTTTTTATGCTGTGATATACGTATTCACTTCTTGTCTGATCCAAATTAGGATCTAGAGGTTGGTAAAGATGGTGTGCCCTATATTGATCGTTATTAGTCCATATCTATAGTCTATTTAGCCAATTATTAACAAGGGATGCATACGTGAGTATAAAGTAGAAAGCAACTATGCAACTAGCCAGATTAAAAATTCACTTGTTCTTAGATTTAAACTATAAACTAAATGGTTACATCCAGGGATCTAAAATTTCCTGATGTGCCTGCAGGAATGGAAATGTCACAACTTTATTGTGGAGGTTGTAGAACATTGCTAATGCACGCACGTGGAGCTACTACCGTGAGATGTTCCTGCTGTAACACTATAAATCTTGTGCCAGGTATGATATATATTTACAATTATGTGTTGCCAGATCTGTACAGCTTTTACACTGCATGCTAATTTGCTGATTAATTTACGTGTTGCTTGATCATTAAATACACTTAATTCATCGATGGTATACCAAACCCTGGTATACACTTAATTTATAATTCTTTCCTTCCTTTCTTCTTTCCCCTTGCGGTGTATTTCAGCTATATATGTCTGTGAGAAATTAAAGAATGTAAGCCAACTATATGTACATCATACTCAAACAAGTATTTGTTGACTACTTCCAGTGACCTACTCTCCACAAATATTGTACTGTTTAGCGAAGGATCATGAATAATTTTTATATCTCACACACTTCCCCTTGTGCAAAAACCCTTTGGGTTTGAAATGTGGACGTGGTGGGGAAATTCACTTTCATTCAGAAGAATGGGAGCAAAAAGGGTTGACTTTCGATTGGTTGGTCATAGTTTTTGATACCATGCCCACGGGCAAACCTTCTAAAAGCTTAATATGTTTGGTAAAATGCTTTTTTTGTCTCTAATAACTAAAAAATTCTGCAATAAATCCATTTAACGTAATATCTTCTGATTATTCCAAGGACAGCATAATTTTAATTATAATTATATATCACCAAGGTGTGTGGTATAGTTGAGACATAGGTTCTCAAATTATCTTTCCCAACATGGTATTCGGATCCATACTTGATGGACCATGCAATATTTTTGTAGTTAACTGACTGTGTTTCAACTTCGATCCCCTGCCCTATCTACTGTGCTCAGTGTACACCTCGGTGTAGCCTTTTCTCTTTCCTCTGCATTGCTTGGTGGGGCTGTAGAGTTACTGTTGGTGAGCATTATCTTCACTGACCTACCCCACTGTCATCCTTAATATCCTTAGCGTGTCCAGTGCACCATGGTGTGCTGCAAATGAAGCTGTTGTGTACCACCACATCCTGCAAGGTTTCTGTTCCCTTGCTTGGTGCACCTGGTTTCTATCTGGTTGTCAAGGGATGTGTTCCATTCAACTCAATAATTTTTGTCCGGCCTTATTTAGGCCCTTAGCTGGCCAGCACTTGCCCAAAGCCACTTTGATACCTTGGAAGTTTCACTTTTGGGTTTTTGTACACACAATGATGGTAGAGACCCTTGTTTTCACCCATACTGTGTTGGTTGAGTCTTCTAGCCTAATTTTTTGTATCCCCGAGTCCTTATATGGCATCAAACAGTCTCTTCAAGAATGGTTCCATAGGTTCAGTTTGTTATTCCACAATTTGATATTATTTTGAATAAATTTAACCTTCTACTGCTAAGTGCTACACGCCTTGGGGCCTCATCTATTTGATTGTGTATGAATGATATTATGATAGTACTGGTATCAAGACAGTAAAGGAAATTGAATTCTAATGCTAAAAGATAAAATAAAACTTCCCTTGATCTGTTTCAATTCCAAGCTACTTTCGAGAAGTCTGGCCCGCTCCTTAACAACTCCACAATCATCATTGCTTAGACAGATCTTTAACTCTCGTATCATGGATTTGTCTGAGATGTGTCCATGGAGTGCTAAGGTGTGTCGAAGCAAAGAATTTTTTTTTCTGGGGACACTTGTCTGAGTTGTCGTACAAGTGTCAGACACAAGGACACACACAATCTCAGGGGAGAACGTGCTTCATAGCTAACAACCACCCAACTATTGGTTATGGGCCTCTCCATTTCTTTTTAACGAATAAGCAGTTGGATATGACTCATATGAGCATATCAACATAAAAGTCGAATAAACCAGCCTATGATTTTTTTCCTAATCAATATCATCCACTTGCAGTAATTCCTTATCTATAAACTACAAAAACAAGATAGAATCTTGGTTCATTTGGATATGAGCATAACCCGAAATTCAGATTAGTTTTAAATAACTTGATTAGTTTTCTATGCTTGATGACAGTTTGTATTGAAAAATGCTGTCATTATTATCCACATAGCTCAATAATGAGGGCGTTTTAAATGTAAAAATTTACGTGTAAACTTCAGGATGTTTGGTGTTCATGAAGTTTCATTTAGTTAGTTCCATTTTCTTCATCTATGGATATTTTATTTTATTGTAATGATTAATGTTGCCAATCATGCATGCTAAGTTGTTTACTGACTTATTGTTGGCTTTGCCTTTAAAGATTCTAATCAAATGAACCATATCCGTTGTGGGAACTGCCGGACAACACTCATGTATCCTCATGGAGCTCCTTCAGTCAAATGTGCAGTTTGTCACTATATTACTAATGTCGATGTAAGTGTACATTGATGGATTATATTAATCTGTTATTTCACTTTCTATTTTCACAAATATTTTCAGTAAATTAATTCTGTTGATCTGGAGTTCATTTTGTTGTAAACTTAGTTAGTTGTGCCAATCAAGATTCTATTTTGATAAGATTGTAGCTAAAGATTTTAGACTGATTGGATTTGAAGAATAGGAAGTAAAGTTGTAGCTAATTGATTATGTTTTATGATTAACTTGTTGAAAATCAGAAAATAATTGGTCAGATTACGTCATTTTGTTCGGGCTTCAATTTGTTGGGTAGTTTCTGCAGTTATTAGAACTATCTGCACTATGTTGAAAGATATTTAAGAAAAGAAAGACAGGATCGTAGGAAAGAACTATAAAAGCTTGATATAGATGGGTACATAAATGTTATGATGCATGTTATTTTAATAGAAAAAGATTGCATTTATTGTTATATACATTACTTCAAATATATTTTAGGATTCTGGTACTTGTATGGTTATAACTGTCTCCATAACACGCGACTGTCATGAGCACGGGTTCAAATTCCTCTATGCCTGCAATTTACTTGATATCCGTTGTCAACATTTTGCATTTTATGTGGTTTTGTATTGAGCTCATATCTTTTACCCTTTCCTGGATTGTCCTGTAGATGACCAATGGAAGGCCGCCAACTCCTGTACTGACACCTAATGAAACAACCAGCTCCGAAACGGTATCTTCTACTGCATCACTATACTTTTGACTTTCTTTTGGTGATTATTCATATTACATGTCGAATTATTGTTATGACATTGATATCTAACAAATATACATGTGATCTTAATACCCTGCAGTCAAGACCTCACTTTGAGAGCCAAACTGTAGTAGTAGAAAATCCTATGTCCGTTGATTCAAGTGGGAAATTG
Protein sequence

>MS.gene033925.t1

MRSHIMCTGCRNILLYPRGASNVCCAVCSTITPVIPVLPPGMEMSQLYCGGCRTLLMHARGATTVRCSCCNTINLVPDSNQMNHIRCGNCRTTLMYPHGAPSVKCAVCHYITNVDMTNGRPPTPVLTPNETTSSETSRPHFESQTVVVENPMSVDSSGKL