Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034217.t1 | XP_014518279.1 | 47.6 | 744 | 332 | 5 | 1 | 686 | 40 | 783 | 6.70E-193 | 684.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034217.t1 | Q9SWG3 | 28.7 | 717 | 433 | 17 | 12 | 679 | 66 | 753 | 1.3e-80 | 302.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034217.t1 | A0A1S3VJK5 | 47.6 | 744 | 332 | 5 | 1 | 686 | 40 | 783 | 4.8e-193 | 684.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene034217.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034217.t1 | MTR_0856s0010 | 51.220 | 123 | 59 | 1 | 1 | 122 | 38 | 160 | 3.80e-32 | 122 |
| MS.gene034217.t1 | MTR_7g446060 | 51.220 | 82 | 40 | 0 | 79 | 160 | 7 | 88 | 4.27e-20 | 87.4 |
| MS.gene034217.t1 | MTR_1g008290 | 32.331 | 133 | 88 | 1 | 57 | 189 | 14 | 144 | 9.85e-17 | 78.2 |
| MS.gene034217.t1 | MTR_6g022070 | 28.276 | 145 | 100 | 1 | 246 | 390 | 1 | 141 | 5.35e-16 | 80.5 |
| MS.gene034217.t1 | MTR_7g115320 | 61.111 | 54 | 18 | 1 | 86 | 139 | 9 | 59 | 5.96e-15 | 70.9 |
| MS.gene034217.t1 | MTR_1g070355 | 26.316 | 209 | 139 | 7 | 3 | 201 | 80 | 283 | 6.67e-13 | 72.4 |
| MS.gene034217.t1 | MTR_0558s0020 | 23.111 | 225 | 149 | 5 | 1 | 201 | 40 | 264 | 1.34e-12 | 69.3 |
| MS.gene034217.t1 | MTR_1g083640 | 23.556 | 225 | 148 | 5 | 1 | 201 | 55 | 279 | 2.30e-12 | 68.6 |
| MS.gene034217.t1 | MTR_6g051425 | 23.529 | 204 | 139 | 5 | 11 | 201 | 31 | 230 | 3.17e-12 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034217.t1 | AT4G15090 | 28.731 | 717 | 433 | 17 | 12 | 679 | 66 | 753 | 1.71e-90 | 300 |
| MS.gene034217.t1 | AT4G15090 | 28.731 | 717 | 433 | 17 | 12 | 679 | 66 | 753 | 1.71e-90 | 300 |
| MS.gene034217.t1 | AT4G15090 | 28.731 | 717 | 433 | 17 | 12 | 679 | 66 | 753 | 1.71e-90 | 300 |
| MS.gene034217.t1 | AT4G15090 | 28.731 | 717 | 433 | 17 | 12 | 679 | 66 | 753 | 1.71e-90 | 300 |
| MS.gene034217.t1 | AT4G15090 | 28.731 | 717 | 433 | 17 | 12 | 679 | 66 | 753 | 1.71e-90 | 300 |
| MS.gene034217.t1 | AT4G38180 | 29.080 | 674 | 396 | 16 | 1 | 602 | 77 | 740 | 2.08e-85 | 285 |
| MS.gene034217.t1 | AT3G22170 | 26.486 | 740 | 432 | 15 | 1 | 678 | 74 | 763 | 9.58e-81 | 274 |
| MS.gene034217.t1 | AT3G22170 | 26.486 | 740 | 432 | 15 | 1 | 678 | 74 | 763 | 9.58e-81 | 274 |
| MS.gene034217.t1 | AT1G76320 | 26.339 | 691 | 425 | 15 | 1 | 630 | 1 | 668 | 3.55e-76 | 258 |
| MS.gene034217.t1 | AT1G76320 | 27.939 | 587 | 358 | 11 | 1 | 541 | 1 | 568 | 1.18e-75 | 258 |
| MS.gene034217.t1 | AT1G76320 | 27.939 | 587 | 358 | 11 | 1 | 541 | 1 | 568 | 1.35e-75 | 258 |
| MS.gene034217.t1 | AT1G76320 | 27.939 | 587 | 358 | 11 | 1 | 541 | 1 | 568 | 1.35e-75 | 258 |
| MS.gene034217.t1 | AT1G52520 | 28.546 | 564 | 341 | 12 | 1 | 515 | 89 | 639 | 2.95e-71 | 245 |
| MS.gene034217.t1 | AT3G06250 | 28.444 | 559 | 307 | 15 | 1 | 514 | 194 | 704 | 1.25e-62 | 223 |
| MS.gene034217.t1 | AT3G06250 | 28.444 | 559 | 307 | 15 | 1 | 514 | 194 | 704 | 1.25e-62 | 223 |
| MS.gene034217.t1 | AT3G06250 | 28.444 | 559 | 307 | 15 | 1 | 514 | 194 | 704 | 1.25e-62 | 223 |
| MS.gene034217.t1 | AT2G27110 | 27.228 | 606 | 347 | 15 | 1 | 553 | 53 | 617 | 3.74e-59 | 214 |
| MS.gene034217.t1 | AT2G27110 | 27.228 | 606 | 347 | 15 | 1 | 553 | 53 | 617 | 3.74e-59 | 214 |
| MS.gene034217.t1 | AT5G18960 | 28.723 | 564 | 335 | 18 | 1 | 530 | 215 | 745 | 2.03e-57 | 208 |
| MS.gene034217.t1 | AT5G18960 | 28.723 | 564 | 335 | 18 | 1 | 530 | 215 | 745 | 2.03e-57 | 208 |
| MS.gene034217.t1 | AT2G27110 | 28.870 | 478 | 276 | 10 | 121 | 553 | 14 | 472 | 5.57e-56 | 203 |
| MS.gene034217.t1 | AT1G80010 | 27.163 | 578 | 350 | 12 | 1 | 518 | 99 | 665 | 2.21e-55 | 202 |
| MS.gene034217.t1 | AT2G32250 | 28.217 | 443 | 256 | 7 | 173 | 566 | 135 | 564 | 2.13e-53 | 197 |
| MS.gene034217.t1 | AT2G32250 | 28.217 | 443 | 256 | 7 | 173 | 566 | 176 | 605 | 2.34e-53 | 196 |
| MS.gene034217.t1 | AT2G32250 | 28.217 | 443 | 256 | 7 | 173 | 566 | 135 | 564 | 2.66e-53 | 196 |
| MS.gene034217.t1 | AT2G32250 | 28.217 | 443 | 256 | 7 | 173 | 566 | 176 | 605 | 2.97e-53 | 197 |
| MS.gene034217.t1 | AT2G32250 | 28.217 | 443 | 256 | 7 | 173 | 566 | 176 | 605 | 2.97e-53 | 197 |
| MS.gene034217.t1 | AT2G32250 | 28.217 | 443 | 256 | 7 | 173 | 566 | 176 | 605 | 3.32e-53 | 197 |
| MS.gene034217.t1 | AT2G32250 | 28.217 | 443 | 256 | 7 | 173 | 566 | 176 | 605 | 3.32e-53 | 197 |
| MS.gene034217.t1 | AT2G32250 | 28.217 | 443 | 256 | 7 | 173 | 566 | 176 | 605 | 3.32e-53 | 197 |
| MS.gene034217.t1 | AT4G19990 | 25.871 | 603 | 336 | 14 | 3 | 540 | 27 | 583 | 7.54e-52 | 192 |
| MS.gene034217.t1 | AT4G19990 | 25.871 | 603 | 336 | 14 | 3 | 540 | 27 | 583 | 7.54e-52 | 192 |
| MS.gene034217.t1 | AT4G19990 | 25.871 | 603 | 336 | 14 | 3 | 540 | 27 | 583 | 8.54e-52 | 192 |
| MS.gene034217.t1 | AT4G19990 | 25.871 | 603 | 336 | 14 | 3 | 540 | 41 | 597 | 1.35e-51 | 191 |
| MS.gene034217.t1 | AT4G19990 | 25.871 | 603 | 336 | 14 | 3 | 540 | 27 | 583 | 1.48e-51 | 191 |
| MS.gene034217.t1 | AT4G19990 | 25.871 | 603 | 336 | 14 | 3 | 540 | 27 | 583 | 1.48e-51 | 191 |
| MS.gene034217.t1 | AT4G38170 | 30.225 | 311 | 211 | 2 | 205 | 514 | 94 | 399 | 4.53e-50 | 184 |
| MS.gene034217.t1 | AT4G19990 | 26.160 | 539 | 303 | 12 | 53 | 540 | 32 | 526 | 2.35e-48 | 181 |
| MS.gene034217.t1 | AT1G10240 | 24.064 | 561 | 346 | 17 | 12 | 511 | 63 | 604 | 7.61e-41 | 159 |
| MS.gene034217.t1 | AT1G10240 | 24.064 | 561 | 346 | 17 | 12 | 511 | 63 | 604 | 7.61e-41 | 159 |
| MS.gene034217.t1 | AT5G28530 | 25.176 | 568 | 338 | 14 | 12 | 511 | 70 | 618 | 6.55e-39 | 154 |
| MS.gene034217.t1 | AT5G28530 | 25.000 | 568 | 335 | 14 | 12 | 511 | 70 | 614 | 1.30e-38 | 152 |
| MS.gene034217.t1 | AT5G28530 | 25.000 | 568 | 335 | 14 | 12 | 511 | 70 | 614 | 1.30e-38 | 152 |
| MS.gene034217.t1 | AT5G28530 | 25.676 | 518 | 335 | 14 | 12 | 511 | 70 | 555 | 9.41e-38 | 149 |
| MS.gene034217.t1 | AT5G28530 | 25.483 | 518 | 332 | 14 | 12 | 511 | 70 | 551 | 1.47e-37 | 149 |
Find 128 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCGCAAACCCTTGTTTCA+TGG | 0.299904 | 4.4:+90747261 | None:intergenic |
| GGCTATGCAGAATGCAATTC+AGG | 0.347065 | 4.4:-90746457 | MS.gene034217:CDS |
| AGTATTGTGTTGATTTCAAC+GGG | 0.389824 | 4.4:-90745813 | MS.gene034217:CDS |
| CACCACCTATGCCTAGTATT+AGG | 0.393202 | 4.4:+90746426 | None:intergenic |
| GTACACCCATGACAAGTATA+TGG | 0.398379 | 4.4:-90745959 | MS.gene034217:CDS |
| GGATTAAGAATTGGTTGATC+AGG | 0.405554 | 4.4:+90745391 | None:intergenic |
| CTAGGCATAGGTGGTGTCTA+TGG | 0.405638 | 4.4:-90746419 | MS.gene034217:CDS |
| ACTTCCACAACCGAAACAAT+TGG | 0.413255 | 4.4:+90745271 | None:intergenic |
| ACATTACTTCCTATGTCTGA+TGG | 0.423977 | 4.4:-90745138 | MS.gene034217:CDS |
| CCTCTGTGTTGTTGACATTC+CGG | 0.424793 | 4.4:+90746170 | None:intergenic |
| AAAACCAATTGTTTCGGTTG+TGG | 0.428388 | 4.4:-90745275 | MS.gene034217:CDS |
| TTGGTGGTATGTTTGATTCA+TGG | 0.433399 | 4.4:+90747164 | None:intergenic |
| TTGGTTTAAAGAAGGGTCTA+TGG | 0.443788 | 4.4:-90747090 | MS.gene034217:CDS |
| ATGGTTTGGGTGAAAATGAT+TGG | 0.445440 | 4.4:-90746257 | MS.gene034217:CDS |
| CATTACTTCCTATGTCTGAT+GGG | 0.447968 | 4.4:-90745137 | MS.gene034217:CDS |
| GCGAACAACCGTGATTTAGT+TGG | 0.451579 | 4.4:+90747025 | None:intergenic |
| ACACAATACTTAGTTTCGTT+CGG | 0.457073 | 4.4:+90745826 | None:intergenic |
| GGCTAAGGTGTATGTCTTCG+AGG | 0.457503 | 4.4:-90746512 | MS.gene034217:CDS |
| TATCCTACTTTGCTAGAATG+AGG | 0.459924 | 4.4:-90746799 | MS.gene034217:CDS |
| AAAACTAGAAACTCTAAGAA+AGG | 0.460549 | 4.4:-90747238 | MS.gene034217:CDS |
| ACTCCAAGACAAGGCTGAAA+AGG | 0.462412 | 4.4:-90746064 | MS.gene034217:CDS |
| CAAATGGTCTAGCAAGAAGT+TGG | 0.463702 | 4.4:-90745494 | MS.gene034217:CDS |
| AGGTTGTGTTTCCTAATACT+AGG | 0.465284 | 4.4:-90746437 | MS.gene034217:CDS |
| GCAAAAGAAAGACACCTTCT+CGG | 0.472868 | 4.4:-90746848 | MS.gene034217:CDS |
| CCACACATAGAAAGATTTGA+AGG | 0.478166 | 4.4:-90745598 | MS.gene034217:CDS |
| GATAACGGTTGGTTTAAAGA+AGG | 0.478332 | 4.4:-90747098 | MS.gene034217:CDS |
| GCCACATTGTGGTGTGGGAG+GGG | 0.479684 | 4.4:-90745455 | MS.gene034217:CDS |
| GAGCAATCAAGTTTCTTCGT+TGG | 0.480101 | 4.4:+90747127 | None:intergenic |
| TCGGGAAGGAAGGAGATGGC+AGG | 0.482875 | 4.4:-90746829 | MS.gene034217:CDS |
| TTGAAATTGTCTCTCGATTG+TGG | 0.489013 | 4.4:+90745987 | None:intergenic |
| TGCTCAGCTAAGATAACGGT+TGG | 0.491405 | 4.4:-90747109 | MS.gene034217:CDS |
| CTTGTTTCATGGCATATTCA+CGG | 0.492232 | 4.4:+90747272 | None:intergenic |
| AAAACCACTAGTTGACTGTT+GGG | 0.492621 | 4.4:+90745077 | None:intergenic |
| TCCGTTAAAAGTACCACGTA+AGG | 0.492742 | 4.4:-90745371 | MS.gene034217:CDS |
| GACAATACTCTCCTCTAAAA+CGG | 0.498094 | 4.4:+90745858 | None:intergenic |
| CGTGAATATGCCATGAAACA+AGG | 0.498225 | 4.4:-90747271 | MS.gene034217:CDS |
| TTTCGAAGAGTGGGAAAGAT+GGG | 0.500083 | 4.4:-90746223 | MS.gene034217:CDS |
| TGTATGAAGAAATGATCAAA+TGG | 0.501577 | 4.4:-90745510 | MS.gene034217:CDS |
| GTTGGATTCGTCTTCAAAGT+TGG | 0.502236 | 4.4:+90747145 | None:intergenic |
| ATACTTGTCATGGGTGTACT+CGG | 0.502362 | 4.4:+90745963 | None:intergenic |
| CATCTCCTTCCTTCCCGAGA+AGG | 0.502837 | 4.4:+90746834 | None:intergenic |
| TTACCTGGTTGTTCGAAACA+TGG | 0.503284 | 4.4:-90746533 | MS.gene034217:CDS |
| TGGTCATCTTAGAGTGAAAG+AGG | 0.503540 | 4.4:-90745713 | MS.gene034217:CDS |
| TATGTCTTCGAGGCCTCCAA+TGG | 0.508338 | 4.4:-90746502 | MS.gene034217:CDS |
| TCGGTTACAATTCCCATTGG+AGG | 0.511504 | 4.4:+90746489 | None:intergenic |
| TTACGAAAATCTAACATTTG+TGG | 0.512305 | 4.4:-90746894 | MS.gene034217:CDS |
| AAACGATCAGGCAGGTGTAC+GGG | 0.512319 | 4.4:-90746957 | MS.gene034217:CDS |
| CGTTCCATGGTATGTGATGC+CGG | 0.512631 | 4.4:-90746920 | MS.gene034217:CDS |
| GAGAGATGTCAGAAACTTTG+TGG | 0.514693 | 4.4:-90746870 | MS.gene034217:CDS |
| CAAAAGAAAGACACCTTCTC+GGG | 0.517286 | 4.4:-90746847 | MS.gene034217:CDS |
| GTATCTCCATATACTTGTCA+TGG | 0.517305 | 4.4:+90745953 | None:intergenic |
| CCTTCAAATCTTTCTATGTG+TGG | 0.521556 | 4.4:+90745598 | None:intergenic |
| AAACTAGAAACTCTAAGAAA+GGG | 0.523644 | 4.4:-90747237 | MS.gene034217:CDS |
| TTCCCTCATTCTAGCAAAGT+AGG | 0.524536 | 4.4:+90746796 | None:intergenic |
| AAATGGTCTAGCAAGAAGTT+GGG | 0.529100 | 4.4:-90745493 | MS.gene034217:CDS |
| GAACAAAAGTTTCCGTTCCA+TGG | 0.529264 | 4.4:-90746933 | MS.gene034217:CDS |
| GGATTCGTCTTCAAAGTTGG+TGG | 0.530111 | 4.4:+90747148 | None:intergenic |
| TAAACGATCAGGCAGGTGTA+CGG | 0.533293 | 4.4:-90746958 | MS.gene034217:CDS |
| ATAACGGTTGGTTTAAAGAA+GGG | 0.535542 | 4.4:-90747097 | MS.gene034217:CDS |
| AAGTATTGTGTTGATTTCAA+CGG | 0.536214 | 4.4:-90745814 | MS.gene034217:CDS |
| TAAAACCACTAGTTGACTGT+TGG | 0.536849 | 4.4:+90745076 | None:intergenic |
| ATCCTACTTTGCTAGAATGA+GGG | 0.537508 | 4.4:-90746798 | MS.gene034217:CDS |
| ACTAAATCACGGTTGTTCGC+TGG | 0.539768 | 4.4:-90747022 | MS.gene034217:CDS |
| TGATCGGTTACAATTCCCAT+TGG | 0.541217 | 4.4:+90746486 | None:intergenic |
| CTGCATAGCCTTGCACTGAT+CGG | 0.542185 | 4.4:+90746470 | None:intergenic |
| CTATGAGATTGACATGGACG+AGG | 0.547341 | 4.4:-90746756 | MS.gene034217:CDS |
| TGATTGCTCAGCTAAGATAA+CGG | 0.550952 | 4.4:-90747113 | MS.gene034217:CDS |
| TGTTTGCTGTTTGAGTTCAG+AGG | 0.551367 | 4.4:-90745766 | MS.gene034217:CDS |
| TATCTCCATATACTTGTCAT+GGG | 0.551454 | 4.4:+90745954 | None:intergenic |
| ATTCTAACTTGTGCAAGAGA+AGG | 0.552020 | 4.4:-90747190 | MS.gene034217:CDS |
| AGACACCTTCTCGGGAAGGA+AGG | 0.553011 | 4.4:-90746839 | MS.gene034217:CDS |
| CAGCCACATTGTGGTGTGGG+AGG | 0.557227 | 4.4:-90745457 | MS.gene034217:CDS |
| TTACAGCCACATTGTGGTGT+GGG | 0.557892 | 4.4:-90745460 | MS.gene034217:CDS |
| TGTTTCGAACAACCAGGTAA+AGG | 0.558836 | 4.4:+90746536 | None:intergenic |
| AGCCACATTGTGGTGTGGGA+GGG | 0.562336 | 4.4:-90745456 | MS.gene034217:CDS |
| CTAAATTTATCTTGCCACGA+TGG | 0.563368 | 4.4:-90745684 | MS.gene034217:CDS |
| GAGATACAAGTAGAATTTCG+TGG | 0.566723 | 4.4:-90745937 | MS.gene034217:CDS |
| TCTCGAAGGTGTGACTACAT+TGG | 0.567976 | 4.4:-90745899 | MS.gene034217:CDS |
| TTCTGGCTGATGCACGTAGT+AGG | 0.568046 | 4.4:-90746713 | MS.gene034217:intron |
| GAACAACCAGGTAAAGGACT+TGG | 0.570795 | 4.4:+90746542 | None:intergenic |
| ATGTCTTCGAGGCCTCCAAT+GGG | 0.571048 | 4.4:-90746501 | MS.gene034217:CDS |
| TTTACAGCCACATTGTGGTG+TGG | 0.571102 | 4.4:-90745461 | MS.gene034217:CDS |
| TGTTTCCTAATACTAGGCAT+AGG | 0.571109 | 4.4:-90746431 | MS.gene034217:CDS |
| TCTGATGGGTTTCAAGCGTA+CGG | 0.579844 | 4.4:-90745123 | MS.gene034217:CDS |
| AAATGCAACTATTATCTCGA+AGG | 0.585418 | 4.4:-90745913 | MS.gene034217:CDS |
| TCAGACATAGGAAGTAATGT+AGG | 0.589454 | 4.4:+90745141 | None:intergenic |
| TTGTGTGTATGATTCTCTGC+GGG | 0.590009 | 4.4:-90746322 | MS.gene034217:CDS |
| AACTCTAAGAAAGGGTCCGA+TGG | 0.598447 | 4.4:-90747229 | MS.gene034217:CDS |
| GCTTGAAACCCATCAGACAT+AGG | 0.598911 | 4.4:+90745129 | None:intergenic |
| GAAATATCTTAACATGCCAT+CGG | 0.599816 | 4.4:+90747213 | None:intergenic |
| GTGAATATGCCATGAAACAA+GGG | 0.602322 | 4.4:-90747270 | MS.gene034217:CDS |
| CGACAACGCACTCCAAGACA+AGG | 0.606607 | 4.4:-90746073 | MS.gene034217:CDS |
| AGATACAAGTAGAATTTCGT+GGG | 0.607840 | 4.4:-90745936 | MS.gene034217:CDS |
| AGAAAGACACCTTCTCGGGA+AGG | 0.609091 | 4.4:-90746843 | MS.gene034217:CDS |
| GACAACCGACGATTAGTTCG+AGG | 0.611005 | 4.4:+90745343 | None:intergenic |
| ACCACCGGCATCACATACCA+TGG | 0.613048 | 4.4:+90746916 | None:intergenic |
| TTCCTAATACTAGGCATAGG+TGG | 0.615209 | 4.4:-90746428 | MS.gene034217:CDS |
| CAAGCACAATCATTCCATGC+GGG | 0.616971 | 4.4:-90746017 | MS.gene034217:CDS |
| GGTTGTTCGAAACATGGCTA+AGG | 0.617470 | 4.4:-90746527 | MS.gene034217:CDS |
| CGTGGCAAGATAAATTTAGA+CGG | 0.619992 | 4.4:+90745688 | None:intergenic |
| AATTGTAACCGATCAGTGCA+AGG | 0.620761 | 4.4:-90746478 | MS.gene034217:CDS |
| CGGGAAGGAAGGAGATGGCA+GGG | 0.622349 | 4.4:-90746828 | MS.gene034217:CDS |
| TCATCCCAACAGTCAACTAG+TGG | 0.623204 | 4.4:-90745081 | MS.gene034217:CDS |
| AAGATACCAAGTCCTTTACC+TGG | 0.624110 | 4.4:-90746548 | MS.gene034217:CDS |
| CCGTTAAAAGTACCACGTAA+GGG | 0.624486 | 4.4:-90745370 | MS.gene034217:CDS |
| CGGCATCACATACCATGGAA+CGG | 0.625469 | 4.4:+90746921 | None:intergenic |
| ATTAGTTTACAGCCACATTG+TGG | 0.625843 | 4.4:-90745466 | MS.gene034217:CDS |
| TAGCCATGTTTCGAACAACC+AGG | 0.627145 | 4.4:+90746530 | None:intergenic |
| ATTGTGGAATTTGACCCGCA+TGG | 0.627292 | 4.4:+90746003 | None:intergenic |
| GTTCGAGGACGTCCCTTACG+TGG | 0.628497 | 4.4:+90745358 | None:intergenic |
| CTTCTCGGGAAGGAAGGAGA+TGG | 0.631777 | 4.4:-90746833 | MS.gene034217:CDS |
| TGCATCAATGAGCAAAGATG+TGG | 0.632890 | 4.4:-90745043 | MS.gene034217:CDS |
| AAAGGATACGCACAATACAA+AGG | 0.637659 | 4.4:-90746366 | MS.gene034217:CDS |
| CAAGGCTGAAAAGGAATACG+AGG | 0.638254 | 4.4:-90746055 | MS.gene034217:CDS |
| AGATAAGTCCAACTAAATCA+CGG | 0.645312 | 4.4:-90747033 | MS.gene034217:CDS |
| TTATGAAATTGCAGAATGTG+CGG | 0.662542 | 4.4:-90745560 | MS.gene034217:CDS |
| TACAAATCACAAGTTTGACT+AGG | 0.667121 | 4.4:+90745529 | None:intergenic |
| TTAGAGGAGAGTATTGTCTG+TGG | 0.669312 | 4.4:-90745853 | MS.gene034217:CDS |
| GGATCATAGCTTAAACACGA+TGG | 0.674970 | 4.4:-90745434 | MS.gene034217:CDS |
| GACGTCCTCGAACTAATCGT+CGG | 0.680634 | 4.4:-90745348 | MS.gene034217:CDS |
| TCATAGCTTAAACACGATGG+AGG | 0.690849 | 4.4:-90745431 | MS.gene034217:CDS |
| TCAAGCACAATCATTCCATG+CGG | 0.697666 | 4.4:-90746018 | MS.gene034217:CDS |
| TCCCCTCCCACACCACAATG+TGG | 0.710147 | 4.4:+90745454 | None:intergenic |
| ATTGTGTGTATGATTCTCTG+CGG | 0.733784 | 4.4:-90746323 | MS.gene034217:CDS |
| TCCATGGTATGTGATGCCGG+TGG | 0.764195 | 4.4:-90746917 | MS.gene034217:CDS |
| CCGGAATGTCAACAACACAG+AGG | 0.797075 | 4.4:-90746170 | MS.gene034217:CDS |
| AGATTGATATGCATGCACAG+CGG | 0.798983 | 4.4:-90746991 | MS.gene034217:CDS |
| GTATTGTGTTGATTTCAACG+GGG | 0.841514 | 4.4:-90745812 | MS.gene034217:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTTAAAAAATGATTTCT+GGG | - | chr4.4:90746143-90746162 | MS.gene034217:CDS | 10.0% |
| !!! | AAATCATTTTTTAAATAACA+TGG | + | chr4.4:90746141-90746160 | None:intergenic | 10.0% |
| !! | AATGTAATCACAATAATAAT+AGG | + | chr4.4:90747104-90747123 | None:intergenic | 15.0% |
| !! | GTTATTTAAAAAATGATTTC+TGG | - | chr4.4:90746142-90746161 | MS.gene034217:CDS | 15.0% |
| !! | AAGAAAAAAACCAATTGTTT+CGG | - | chr4.4:90747055-90747074 | MS.gene034217:CDS | 20.0% |
| !! | ACAACATTCATTGAAAAATA+TGG | - | chr4.4:90746060-90746079 | MS.gene034217:CDS | 20.0% |
| !! | ATTCATTGAAAAATATGGTT+TGG | - | chr4.4:90746065-90746084 | MS.gene034217:CDS | 20.0% |
| !! | TTCATTGAAAAATATGGTTT+GGG | - | chr4.4:90746066-90746085 | MS.gene034217:CDS | 20.0% |
| ! | AAAATTGCCGAAAAATTGAA+AGG | - | chr4.4:90745952-90745971 | MS.gene034217:CDS | 25.0% |
| ! | TGTATGAAGAAATGATCAAA+TGG | - | chr4.4:90746826-90746845 | MS.gene034217:CDS | 25.0% |
| ! | TTACGAAAATCTAACATTTG+TGG | - | chr4.4:90745442-90745461 | MS.gene034217:CDS | 25.0% |
| !! | AAAACTAGAAACTCTAAGAA+AGG | - | chr4.4:90745098-90745117 | MS.gene034217:CDS | 25.0% |
| !! | AAACTAGAAACTCTAAGAAA+GGG | - | chr4.4:90745099-90745118 | MS.gene034217:CDS | 25.0% |
| !!! | AAGTATTGTGTTGATTTCAA+CGG | - | chr4.4:90746522-90746541 | MS.gene034217:CDS | 25.0% |
| !!! | ACTTTTAACGGATTAAGAAT+TGG | + | chr4.4:90746957-90746976 | None:intergenic | 25.0% |
| !!! | TTTTTTCACAATCTTTTCAG+TGG | + | chr4.4:90747021-90747040 | None:intergenic | 25.0% |
| AAATGCAACTATTATCTCGA+AGG | - | chr4.4:90746423-90746442 | MS.gene034217:CDS | 30.0% | |
| ACACAATACTTAGTTTCGTT+CGG | + | chr4.4:90746513-90746532 | None:intergenic | 30.0% | |
| AGATAAGTCCAACTAAATCA+CGG | - | chr4.4:90745303-90745322 | MS.gene034217:CDS | 30.0% | |
| AGATACAAGTAGAATTTCGT+GGG | - | chr4.4:90746400-90746419 | MS.gene034217:CDS | 30.0% | |
| GAAATATCTTAACATGCCAT+CGG | + | chr4.4:90745126-90745145 | None:intergenic | 30.0% | |
| TACAAATCACAAGTTTGACT+AGG | + | chr4.4:90746810-90746829 | None:intergenic | 30.0% | |
| TATCTCCATATACTTGTCAT+GGG | + | chr4.4:90746385-90746404 | None:intergenic | 30.0% | |
| TTATGAAATTGCAGAATGTG+CGG | - | chr4.4:90746776-90746795 | MS.gene034217:CDS | 30.0% | |
| ! | AACATCACCAAAGTATTCAT+AGG | + | chr4.4:90745653-90745672 | None:intergenic | 30.0% |
| ! | CTTTTTCTATGAGATTGACA+TGG | - | chr4.4:90745574-90745593 | MS.gene034217:CDS | 30.0% |
| ! | GAATACTATTTTCGAAGAGT+GGG | - | chr4.4:90746104-90746123 | MS.gene034217:CDS | 30.0% |
| ! | TGAATACTATTTTCGAAGAG+TGG | - | chr4.4:90746103-90746122 | MS.gene034217:CDS | 30.0% |
| ! | TGCGTATCCTTTCAATTTTT+CGG | + | chr4.4:90745962-90745981 | None:intergenic | 30.0% |
| ! | TTAAAAAATGATTTCTGGGC+CGG | - | chr4.4:90746147-90746166 | MS.gene034217:CDS | 30.0% |
| ! | TTCATGTGCAGAATATTTTC+TGG | - | chr4.4:90745606-90745625 | MS.gene034217:CDS | 30.0% |
| !! | AGTATTGTGTTGATTTCAAC+GGG | - | chr4.4:90746523-90746542 | MS.gene034217:CDS | 30.0% |
| !! | ATAACGGTTGGTTTAAAGAA+GGG | - | chr4.4:90745239-90745258 | MS.gene034217:intron | 30.0% |
| !! | GACAATTTTGATAAACGATC+AGG | - | chr4.4:90745367-90745386 | MS.gene034217:CDS | 30.0% |
| !!! | AGTATGAATGCTTTTTTCGA+TGG | - | chr4.4:90746195-90746214 | MS.gene034217:CDS | 30.0% |
| !!! | TATGTGTGGTTGTAGTTTTT+TGG | + | chr4.4:90746727-90746746 | None:intergenic | 30.0% |
| AAAACCAATTGTTTCGGTTG+TGG | - | chr4.4:90747061-90747080 | MS.gene034217:CDS | 35.0% | |
| AAAACCACTAGTTGACTGTT+GGG | + | chr4.4:90747262-90747281 | None:intergenic | 35.0% | |
| AAAGGATACGCACAATACAA+AGG | - | chr4.4:90745970-90745989 | MS.gene034217:CDS | 35.0% | |
| AAATGGTCTAGCAAGAAGTT+GGG | - | chr4.4:90746843-90746862 | MS.gene034217:CDS | 35.0% | |
| ACATTACTTCCTATGTCTGA+TGG | - | chr4.4:90747198-90747217 | MS.gene034217:CDS | 35.0% | |
| AGGTTGTGTTTCCTAATACT+AGG | - | chr4.4:90745899-90745918 | MS.gene034217:CDS | 35.0% | |
| ATACTTGTTTGTCAAGTAGG+TGG | + | chr4.4:90745689-90745708 | None:intergenic | 35.0% | |
| ATCCTACTTTGCTAGAATGA+GGG | - | chr4.4:90745538-90745557 | MS.gene034217:CDS | 35.0% | |
| ATGATTGACACCAACAAATG+GGG | + | chr4.4:90745725-90745744 | None:intergenic | 35.0% | |
| ATTGTGTGTATGATTCTCTG+CGG | - | chr4.4:90746013-90746032 | MS.gene034217:CDS | 35.0% | |
| CATTACTTCCTATGTCTGAT+GGG | - | chr4.4:90747199-90747218 | MS.gene034217:CDS | 35.0% | |
| CCACACATAGAAAGATTTGA+AGG | - | chr4.4:90746738-90746757 | MS.gene034217:CDS | 35.0% | |
| CCTTCAAATCTTTCTATGTG+TGG | + | chr4.4:90746741-90746760 | None:intergenic | 35.0% | |
| CGTGGCAAGATAAATTTAGA+CGG | + | chr4.4:90746651-90746670 | None:intergenic | 35.0% | |
| CTAAATTTATCTTGCCACGA+TGG | - | chr4.4:90746652-90746671 | MS.gene034217:intron | 35.0% | |
| CTTGTTTCATGGCATATTCA+CGG | + | chr4.4:90745067-90745086 | None:intergenic | 35.0% | |
| GAGATACAAGTAGAATTTCG+TGG | - | chr4.4:90746399-90746418 | MS.gene034217:CDS | 35.0% | |
| GATGATTGACACCAACAAAT+GGG | + | chr4.4:90745726-90745745 | None:intergenic | 35.0% | |
| GGATTAAGAATTGGTTGATC+AGG | + | chr4.4:90746948-90746967 | None:intergenic | 35.0% | |
| GTATCTCCATATACTTGTCA+TGG | + | chr4.4:90746386-90746405 | None:intergenic | 35.0% | |
| GTCATACTTGTTTGTCAAGT+AGG | + | chr4.4:90745692-90745711 | None:intergenic | 35.0% | |
| GTGAATATGCCATGAAACAA+GGG | - | chr4.4:90745066-90745085 | MS.gene034217:CDS | 35.0% | |
| TAAAACCACTAGTTGACTGT+TGG | + | chr4.4:90747263-90747282 | None:intergenic | 35.0% | |
| TATCCTACTTTGCTAGAATG+AGG | - | chr4.4:90745537-90745556 | MS.gene034217:CDS | 35.0% | |
| TCAGACATAGGAAGTAATGT+AGG | + | chr4.4:90747198-90747217 | None:intergenic | 35.0% | |
| TGATGATTGACACCAACAAA+TGG | + | chr4.4:90745727-90745746 | None:intergenic | 35.0% | |
| TGATTGCTCAGCTAAGATAA+CGG | - | chr4.4:90745223-90745242 | MS.gene034217:intron | 35.0% | |
| TGTTTCCTAATACTAGGCAT+AGG | - | chr4.4:90745905-90745924 | MS.gene034217:CDS | 35.0% | |
| TTGAAATTGTCTCTCGATTG+TGG | + | chr4.4:90746352-90746371 | None:intergenic | 35.0% | |
| TTGGTTTAAAGAAGGGTCTA+TGG | - | chr4.4:90745246-90745265 | MS.gene034217:intron | 35.0% | |
| ! | ATCTACATACACCGTTTTAG+AGG | - | chr4.4:90746467-90746486 | MS.gene034217:CDS | 35.0% |
| ! | ATGGTTTGGGTGAAAATGAT+TGG | - | chr4.4:90746079-90746098 | MS.gene034217:CDS | 35.0% |
| ! | ATTAGTTTACAGCCACATTG+TGG | - | chr4.4:90746870-90746889 | MS.gene034217:CDS | 35.0% |
| ! | ATTCTAACTTGTGCAAGAGA+AGG | - | chr4.4:90745146-90745165 | MS.gene034217:intron | 35.0% |
| ! | CAATCCATTTTACTAGGTTG+CGG | - | chr4.4:90745751-90745770 | MS.gene034217:CDS | 35.0% |
| ! | GACAATACTCTCCTCTAAAA+CGG | + | chr4.4:90746481-90746500 | None:intergenic | 35.0% |
| ! | TGTTAGATTTTCGTAACCAC+CGG | + | chr4.4:90745438-90745457 | None:intergenic | 35.0% |
| ! | TTCACATTTTTACTCCATCG+TGG | + | chr4.4:90746669-90746688 | None:intergenic | 35.0% |
| ! | TTGGTGGTATGTTTGATTCA+TGG | + | chr4.4:90745175-90745194 | None:intergenic | 35.0% |
| ! | TTTCACAATCTTTTCAGTGG+TGG | + | chr4.4:90747018-90747037 | None:intergenic | 35.0% |
| !! | ATTTTGATAAACGATCAGGC+AGG | - | chr4.4:90745371-90745390 | MS.gene034217:CDS | 35.0% |
| !! | GATAACGGTTGGTTTAAAGA+AGG | - | chr4.4:90745238-90745257 | MS.gene034217:intron | 35.0% |
| !! | GTATTGTGTTGATTTCAACG+GGG | - | chr4.4:90746524-90746543 | MS.gene034217:CDS | 35.0% |
| !! | TTGTTGGTGTCAATCATCAT+GGG | - | chr4.4:90745728-90745747 | MS.gene034217:CDS | 35.0% |
| !! | TTTGTTGGTGTCAATCATCA+TGG | - | chr4.4:90745727-90745746 | MS.gene034217:CDS | 35.0% |
| !!! | GGGTTGATGATTTTGTTGTT+GGG | - | chr4.4:90746034-90746053 | MS.gene034217:CDS | 35.0% |
| !!! | TTGATGATTTTGTTGTTGGG+TGG | - | chr4.4:90746037-90746056 | MS.gene034217:CDS | 35.0% |
| AAGACCGCAACCTAGTAAAA+TGG | + | chr4.4:90745758-90745777 | None:intergenic | 40.0% | |
| AAGATACCAAGTCCTTTACC+TGG | - | chr4.4:90745788-90745807 | MS.gene034217:CDS | 40.0% | |
| AATTGTAACCGATCAGTGCA+AGG | - | chr4.4:90745858-90745877 | MS.gene034217:CDS | 40.0% | |
| ACTTCCACAACCGAAACAAT+TGG | + | chr4.4:90747068-90747087 | None:intergenic | 40.0% | |
| AGATTGATATGCATGCACAG+CGG | - | chr4.4:90745345-90745364 | MS.gene034217:CDS | 40.0% | |
| AGGTCTGCCTATGAATACTT+TGG | - | chr4.4:90745643-90745662 | MS.gene034217:CDS | 40.0% | |
| ATACTTGTCATGGGTGTACT+CGG | + | chr4.4:90746376-90746395 | None:intergenic | 40.0% | |
| CAAAAGAAAGACACCTTCTC+GGG | - | chr4.4:90745489-90745508 | MS.gene034217:CDS | 40.0% | |
| CAAATGGTCTAGCAAGAAGT+TGG | - | chr4.4:90746842-90746861 | MS.gene034217:CDS | 40.0% | |
| CGTGAATATGCCATGAAACA+AGG | - | chr4.4:90745065-90745084 | MS.gene034217:CDS | 40.0% | |
| GAACAAAAGTTTCCGTTCCA+TGG | - | chr4.4:90745403-90745422 | MS.gene034217:CDS | 40.0% | |
| GAGAGATGTCAGAAACTTTG+TGG | - | chr4.4:90745466-90745485 | MS.gene034217:CDS | 40.0% | |
| GAGCAATCAAGTTTCTTCGT+TGG | + | chr4.4:90745212-90745231 | None:intergenic | 40.0% | |
| GCAAAAGAAAGACACCTTCT+CGG | - | chr4.4:90745488-90745507 | MS.gene034217:CDS | 40.0% | |
| GGATCATAGCTTAAACACGA+TGG | - | chr4.4:90746902-90746921 | MS.gene034217:CDS | 40.0% | |
| GTACACCCATGACAAGTATA+TGG | - | chr4.4:90746377-90746396 | MS.gene034217:CDS | 40.0% | |
| GTTGGATTCGTCTTCAAAGT+TGG | + | chr4.4:90745194-90745213 | None:intergenic | 40.0% | |
| TCAAGCACAATCATTCCATG+CGG | - | chr4.4:90746318-90746337 | MS.gene034217:CDS | 40.0% | |
| TCATAGCTTAAACACGATGG+AGG | - | chr4.4:90746905-90746924 | MS.gene034217:CDS | 40.0% | |
| TGATCGGTTACAATTCCCAT+TGG | + | chr4.4:90745853-90745872 | None:intergenic | 40.0% | |
| TGCATCAATGAGCAAAGATG+TGG | - | chr4.4:90747293-90747312 | MS.gene034217:CDS | 40.0% | |
| TGGTCATCTTAGAGTGAAAG+AGG | - | chr4.4:90746623-90746642 | MS.gene034217:intron | 40.0% | |
| TGTTTCGAACAACCAGGTAA+AGG | + | chr4.4:90745803-90745822 | None:intergenic | 40.0% | |
| TTACCTGGTTGTTCGAAACA+TGG | - | chr4.4:90745803-90745822 | MS.gene034217:CDS | 40.0% | |
| TTCCCTCATTCTAGCAAAGT+AGG | + | chr4.4:90745543-90745562 | None:intergenic | 40.0% | |
| TTCCTAATACTAGGCATAGG+TGG | - | chr4.4:90745908-90745927 | MS.gene034217:CDS | 40.0% | |
| TTGTGTGTATGATTCTCTGC+GGG | - | chr4.4:90746014-90746033 | MS.gene034217:CDS | 40.0% | |
| TTTCGAAGAGTGGGAAAGAT+GGG | - | chr4.4:90746113-90746132 | MS.gene034217:CDS | 40.0% | |
| TTTCGGTTGTGGAAGTAAGT+TGG | - | chr4.4:90747072-90747091 | MS.gene034217:CDS | 40.0% | |
| ! | AGGAATACGAGGCAGATTTT+CGG | - | chr4.4:90746292-90746311 | MS.gene034217:CDS | 40.0% |
| ! | CATGGGCAATCCATTTTACT+AGG | - | chr4.4:90745745-90745764 | MS.gene034217:CDS | 40.0% |
| ! | CCCTTACGTGGTACTTTTAA+CGG | + | chr4.4:90746969-90746988 | None:intergenic | 40.0% |
| ! | TTTTCGAAGAGTGGGAAAGA+TGG | - | chr4.4:90746112-90746131 | MS.gene034217:CDS | 40.0% |
| !! | AGACATTCGCTTTTCGTACT+TGG | - | chr4.4:90746603-90746622 | MS.gene034217:intron | 40.0% |
| !! | ATTCCTTTTCAGCCTTGTCT+TGG | + | chr4.4:90746278-90746297 | None:intergenic | 40.0% |
| !! | CCGTTAAAAGTACCACGTAA+GGG | - | chr4.4:90746966-90746985 | MS.gene034217:CDS | 40.0% |
| !! | TCCGTTAAAAGTACCACGTA+AGG | - | chr4.4:90746965-90746984 | MS.gene034217:CDS | 40.0% |
| !! | TGTTTGCTGTTTGAGTTCAG+AGG | - | chr4.4:90746570-90746589 | MS.gene034217:CDS | 40.0% |
| !! | TTAGAGGAGAGTATTGTCTG+TGG | - | chr4.4:90746483-90746502 | MS.gene034217:CDS | 40.0% |
| !!! | CGGGTTGATGATTTTGTTGT+TGG | - | chr4.4:90746033-90746052 | MS.gene034217:CDS | 40.0% |
| ACACCAACAAATGGGGCAAA+TGG | + | chr4.4:90745718-90745737 | None:intergenic | 45.0% | |
| ACTAAATCACGGTTGTTCGC+TGG | - | chr4.4:90745314-90745333 | MS.gene034217:CDS | 45.0% | |
| ACTCCAAGACAAGGCTGAAA+AGG | - | chr4.4:90746272-90746291 | MS.gene034217:CDS | 45.0% | |
| ATTGTGGAATTTGACCCGCA+TGG | + | chr4.4:90746336-90746355 | None:intergenic | 45.0% | |
| CAAGCACAATCATTCCATGC+GGG | - | chr4.4:90746319-90746338 | MS.gene034217:CDS | 45.0% | |
| CAAGGCTGAAAAGGAATACG+AGG | - | chr4.4:90746281-90746300 | MS.gene034217:CDS | 45.0% | |
| CACCACCTATGCCTAGTATT+AGG | + | chr4.4:90745913-90745932 | None:intergenic | 45.0% | |
| CTATGAGATTGACATGGACG+AGG | - | chr4.4:90745580-90745599 | MS.gene034217:CDS | 45.0% | |
| GAACAACCAGGTAAAGGACT+TGG | + | chr4.4:90745797-90745816 | None:intergenic | 45.0% | |
| GCGAACAACCGTGATTTAGT+TGG | + | chr4.4:90745314-90745333 | None:intergenic | 45.0% | |
| GCTTGAAACCCATCAGACAT+AGG | + | chr4.4:90747210-90747229 | None:intergenic | 45.0% | |
| GGATTCGTCTTCAAAGTTGG+TGG | + | chr4.4:90745191-90745210 | None:intergenic | 45.0% | |
| GGCTATGCAGAATGCAATTC+AGG | - | chr4.4:90745879-90745898 | MS.gene034217:CDS | 45.0% | |
| GGTTGTTCGAAACATGGCTA+AGG | - | chr4.4:90745809-90745828 | MS.gene034217:CDS | 45.0% | |
| TAAACGATCAGGCAGGTGTA+CGG | - | chr4.4:90745378-90745397 | MS.gene034217:CDS | 45.0% | |
| TAGCCATGTTTCGAACAACC+AGG | + | chr4.4:90745809-90745828 | None:intergenic | 45.0% | |
| TCATCCCAACAGTCAACTAG+TGG | - | chr4.4:90747255-90747274 | MS.gene034217:CDS | 45.0% | |
| TCGGTTACAATTCCCATTGG+AGG | + | chr4.4:90745850-90745869 | None:intergenic | 45.0% | |
| TTACAGCCACATTGTGGTGT+GGG | - | chr4.4:90746876-90746895 | MS.gene034217:CDS | 45.0% | |
| TTTACAGCCACATTGTGGTG+TGG | - | chr4.4:90746875-90746894 | MS.gene034217:CDS | 45.0% | |
| ! | AACTCTAAGAAAGGGTCCGA+TGG | - | chr4.4:90745107-90745126 | MS.gene034217:CDS | 45.0% |
| ! | ATGCCATTTGCCCCATTTGT+TGG | - | chr4.4:90745712-90745731 | MS.gene034217:CDS | 45.0% |
| ! | CCTCTGTGTTGTTGACATTC+CGG | + | chr4.4:90746169-90746188 | None:intergenic | 45.0% |
| ! | GATCGCAAACCCTTGTTTCA+TGG | + | chr4.4:90745078-90745097 | None:intergenic | 45.0% |
| ! | TCTCGAAGGTGTGACTACAT+TGG | - | chr4.4:90746437-90746456 | MS.gene034217:CDS | 45.0% |
| ! | TGCTCAGCTAAGATAACGGT+TGG | - | chr4.4:90745227-90745246 | MS.gene034217:intron | 45.0% |
| !! | TCTGATGGGTTTCAAGCGTA+CGG | - | chr4.4:90747213-90747232 | MS.gene034217:CDS | 45.0% |
| AAACGATCAGGCAGGTGTAC+GGG | - | chr4.4:90745379-90745398 | MS.gene034217:CDS | 50.0% | |
| AGAAAGACACCTTCTCGGGA+AGG | - | chr4.4:90745493-90745512 | MS.gene034217:CDS | 50.0% | |
| ATGTCTTCGAGGCCTCCAAT+GGG | - | chr4.4:90745835-90745854 | MS.gene034217:CDS | 50.0% | |
| CCGGAATGTCAACAACACAG+AGG | - | chr4.4:90746166-90746185 | MS.gene034217:CDS | 50.0% | |
| CGGCATCACATACCATGGAA+CGG | + | chr4.4:90745418-90745437 | None:intergenic | 50.0% | |
| CGTTCCATGGTATGTGATGC+CGG | - | chr4.4:90745416-90745435 | MS.gene034217:CDS | 50.0% | |
| CTAGGCATAGGTGGTGTCTA+TGG | - | chr4.4:90745917-90745936 | MS.gene034217:CDS | 50.0% | |
| GACGTCCTCGAACTAATCGT+CGG | - | chr4.4:90746988-90747007 | MS.gene034217:CDS | 50.0% | |
| GGCTAAGGTGTATGTCTTCG+AGG | - | chr4.4:90745824-90745843 | MS.gene034217:CDS | 50.0% | |
| TATGTCTTCGAGGCCTCCAA+TGG | - | chr4.4:90745834-90745853 | MS.gene034217:CDS | 50.0% | |
| ! | CTGCATAGCCTTGCACTGAT+CGG | + | chr4.4:90745869-90745888 | None:intergenic | 50.0% |
| ! | GACAACCGACGATTAGTTCG+AGG | + | chr4.4:90746996-90747015 | None:intergenic | 50.0% |
| ! | TTCTGGCTGATGCACGTAGT+AGG | - | chr4.4:90745623-90745642 | MS.gene034217:CDS | 50.0% |
| ACCACCGGCATCACATACCA+TGG | + | chr4.4:90745423-90745442 | None:intergenic | 55.0% | |
| AGACACCTTCTCGGGAAGGA+AGG | - | chr4.4:90745497-90745516 | MS.gene034217:CDS | 55.0% | |
| AGCCACATTGTGGTGTGGGA+GGG | - | chr4.4:90746880-90746899 | MS.gene034217:CDS | 55.0% | |
| CATCTCCTTCCTTCCCGAGA+AGG | + | chr4.4:90745505-90745524 | None:intergenic | 55.0% | |
| CGACAACGCACTCCAAGACA+AGG | - | chr4.4:90746263-90746282 | MS.gene034217:CDS | 55.0% | |
| CTTCTCGGGAAGGAAGGAGA+TGG | - | chr4.4:90745503-90745522 | MS.gene034217:CDS | 55.0% | |
| TCCATGGTATGTGATGCCGG+TGG | - | chr4.4:90745419-90745438 | MS.gene034217:CDS | 55.0% | |
| CAGCCACATTGTGGTGTGGG+AGG | - | chr4.4:90746879-90746898 | MS.gene034217:CDS | 60.0% | |
| CGGGAAGGAAGGAGATGGCA+GGG | - | chr4.4:90745508-90745527 | MS.gene034217:CDS | 60.0% | |
| GCCACATTGTGGTGTGGGAG+GGG | - | chr4.4:90746881-90746900 | MS.gene034217:CDS | 60.0% | |
| GTTCGAGGACGTCCCTTACG+TGG | + | chr4.4:90746981-90747000 | None:intergenic | 60.0% | |
| TCCCCTCCCACACCACAATG+TGG | + | chr4.4:90746885-90746904 | None:intergenic | 60.0% | |
| TCGGGAAGGAAGGAGATGGC+AGG | - | chr4.4:90745507-90745526 | MS.gene034217:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 90745026 | 90747332 | 90745026 | ID=MS.gene034217 |
| chr4.4 | mRNA | 90745026 | 90747332 | 90745026 | ID=MS.gene034217.t1;Parent=MS.gene034217 |
| chr4.4 | exon | 90746714 | 90747332 | 90746714 | ID=MS.gene034217.t1.exon1;Parent=MS.gene034217.t1 |
| chr4.4 | CDS | 90746714 | 90747332 | 90746714 | ID=cds.MS.gene034217.t1;Parent=MS.gene034217.t1 |
| chr4.4 | exon | 90745273 | 90746591 | 90745273 | ID=MS.gene034217.t1.exon2;Parent=MS.gene034217.t1 |
| chr4.4 | CDS | 90745273 | 90746591 | 90745273 | ID=cds.MS.gene034217.t1;Parent=MS.gene034217.t1 |
| chr4.4 | exon | 90745026 | 90745163 | 90745026 | ID=MS.gene034217.t1.exon3;Parent=MS.gene034217.t1 |
| chr4.4 | CDS | 90745026 | 90745163 | 90745026 | ID=cds.MS.gene034217.t1;Parent=MS.gene034217.t1 |
| Gene Sequence |
| Protein sequence |
