Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034324.t1 | XP_003596999.2 | 99.6 | 735 | 2 | 1 | 1 | 735 | 4 | 737 | 0.00E+00 | 1416 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034324.t1 | Q94C37 | 79.2 | 708 | 125 | 7 | 32 | 735 | 32 | 721 | 5.7e-308 | 1057.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034324.t1 | G7IKH9 | 99.6 | 735 | 2 | 1 | 1 | 735 | 4 | 737 | 0.0e+00 | 1416.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene034324.t1 | TF | HB-HD-ZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034324.t1 | MTR_2g088470 | 99.592 | 735 | 2 | 1 | 1 | 735 | 4 | 737 | 0.0 | 1517 |
| MS.gene034324.t1 | MTR_4g047800 | 84.906 | 742 | 92 | 10 | 2 | 735 | 5 | 734 | 0.0 | 1243 |
| MS.gene034324.t1 | MTR_8g432540 | 55.570 | 745 | 285 | 10 | 23 | 733 | 77 | 809 | 0.0 | 799 |
| MS.gene034324.t1 | MTR_7g076080 | 56.860 | 707 | 258 | 13 | 58 | 733 | 87 | 777 | 0.0 | 785 |
| MS.gene034324.t1 | MTR_1g101280 | 52.439 | 738 | 305 | 11 | 31 | 730 | 21 | 750 | 0.0 | 751 |
| MS.gene034324.t1 | MTR_5g005600 | 53.107 | 708 | 298 | 14 | 43 | 730 | 23 | 716 | 0.0 | 707 |
| MS.gene034324.t1 | MTR_6g477820 | 49.364 | 707 | 316 | 14 | 60 | 731 | 25 | 724 | 0.0 | 682 |
| MS.gene034324.t1 | MTR_5g029320 | 44.490 | 735 | 357 | 14 | 34 | 730 | 57 | 778 | 0.0 | 634 |
| MS.gene034324.t1 | MTR_2g101720 | 45.361 | 679 | 329 | 9 | 68 | 733 | 143 | 792 | 0.0 | 617 |
| MS.gene034324.t1 | MTR_0198s0030 | 43.624 | 745 | 361 | 14 | 31 | 730 | 21 | 751 | 0.0 | 600 |
| MS.gene034324.t1 | MTR_7g427710 | 44.236 | 694 | 291 | 18 | 64 | 731 | 16 | 639 | 0.0 | 535 |
| MS.gene034324.t1 | MTR_2g030570 | 35.815 | 712 | 416 | 14 | 45 | 734 | 7 | 699 | 1.32e-144 | 439 |
| MS.gene034324.t1 | MTR_2g030600 | 35.989 | 703 | 420 | 14 | 45 | 734 | 7 | 692 | 1.31e-138 | 424 |
| MS.gene034324.t1 | MTR_2g030660 | 33.431 | 682 | 409 | 14 | 57 | 732 | 8 | 650 | 3.80e-110 | 348 |
| MS.gene034324.t1 | MTR_2g083350 | 41.754 | 479 | 258 | 8 | 259 | 731 | 69 | 532 | 9.88e-108 | 339 |
| MS.gene034324.t1 | MTR_2g083330 | 39.121 | 478 | 270 | 7 | 259 | 731 | 65 | 526 | 5.71e-102 | 324 |
| MS.gene034324.t1 | MTR_7g427690 | 41.111 | 450 | 202 | 12 | 186 | 623 | 28 | 426 | 4.12e-99 | 313 |
| MS.gene034324.t1 | MTR_7g427700 | 38.511 | 309 | 137 | 7 | 64 | 364 | 16 | 279 | 3.94e-59 | 206 |
| MS.gene034324.t1 | MTR_7g427700 | 45.342 | 161 | 68 | 4 | 582 | 731 | 281 | 432 | 4.01e-31 | 127 |
| MS.gene034324.t1 | MTR_0653s0020 | 44.393 | 214 | 102 | 3 | 425 | 637 | 1 | 198 | 1.19e-53 | 184 |
| MS.gene034324.t1 | MTR_7g027265 | 51.667 | 120 | 58 | 0 | 64 | 183 | 17 | 136 | 4.46e-39 | 141 |
| MS.gene034324.t1 | MTR_5g046040 | 42.458 | 179 | 99 | 3 | 60 | 237 | 29 | 204 | 5.56e-39 | 149 |
| MS.gene034324.t1 | MTR_1g105420 | 40.957 | 188 | 99 | 3 | 119 | 302 | 1 | 180 | 1.39e-33 | 128 |
| MS.gene034324.t1 | MTR_1g105420 | 75.000 | 40 | 9 | 1 | 365 | 403 | 171 | 210 | 3.39e-13 | 69.7 |
| MS.gene034324.t1 | MTR_2g030690 | 31.944 | 288 | 185 | 6 | 448 | 732 | 1 | 280 | 8.42e-32 | 125 |
| MS.gene034324.t1 | MTR_3g109800 | 22.691 | 758 | 389 | 27 | 67 | 731 | 20 | 673 | 4.17e-27 | 117 |
| MS.gene034324.t1 | MTR_3g109800 | 22.691 | 758 | 389 | 27 | 67 | 731 | 20 | 673 | 5.59e-27 | 117 |
| MS.gene034324.t1 | MTR_3g109800 | 22.691 | 758 | 389 | 27 | 67 | 731 | 20 | 673 | 7.48e-27 | 117 |
| MS.gene034324.t1 | MTR_0653s0010 | 49.587 | 121 | 43 | 3 | 621 | 730 | 1 | 114 | 3.08e-23 | 95.9 |
| MS.gene034324.t1 | MTR_6g027290 | 30.128 | 156 | 105 | 2 | 45 | 199 | 9 | 161 | 1.74e-21 | 92.8 |
| MS.gene034324.t1 | MTR_7g027605 | 50.000 | 90 | 41 | 2 | 336 | 422 | 3 | 91 | 4.74e-20 | 85.9 |
| MS.gene034324.t1 | MTR_2g451350 | 32.824 | 131 | 86 | 2 | 261 | 389 | 1 | 131 | 3.60e-16 | 76.3 |
| MS.gene034324.t1 | MTR_1g105425 | 50.667 | 75 | 34 | 2 | 38 | 110 | 79 | 152 | 4.64e-16 | 76.3 |
| MS.gene034324.t1 | MTR_4g058970 | 22.846 | 499 | 280 | 17 | 309 | 731 | 212 | 681 | 2.89e-15 | 80.5 |
| MS.gene034324.t1 | MTR_4g058970 | 31.405 | 121 | 69 | 3 | 47 | 156 | 8 | 125 | 6.26e-13 | 72.8 |
| MS.gene034324.t1 | MTR_7g427670 | 44.211 | 95 | 41 | 2 | 118 | 212 | 32 | 114 | 4.58e-15 | 72.8 |
| MS.gene034324.t1 | MTR_2g030720 | 29.730 | 148 | 89 | 3 | 57 | 204 | 11 | 143 | 1.31e-13 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034324.t1 | AT1G05230 | 76.996 | 739 | 145 | 7 | 1 | 735 | 4 | 721 | 0.0 | 1135 |
| MS.gene034324.t1 | AT1G05230 | 76.996 | 739 | 145 | 7 | 1 | 735 | 4 | 721 | 0.0 | 1135 |
| MS.gene034324.t1 | AT1G05230 | 76.996 | 739 | 145 | 7 | 1 | 735 | 4 | 721 | 0.0 | 1135 |
| MS.gene034324.t1 | AT1G05230 | 76.996 | 739 | 145 | 7 | 1 | 735 | 4 | 721 | 0.0 | 1135 |
| MS.gene034324.t1 | AT1G05230 | 76.996 | 739 | 145 | 7 | 1 | 735 | 4 | 721 | 0.0 | 1135 |
| MS.gene034324.t1 | AT1G05230 | 76.996 | 739 | 145 | 7 | 1 | 735 | 4 | 721 | 0.0 | 1135 |
| MS.gene034324.t1 | AT1G05230 | 76.996 | 739 | 145 | 7 | 1 | 735 | 4 | 721 | 0.0 | 1135 |
| MS.gene034324.t1 | AT1G05230 | 76.996 | 739 | 145 | 7 | 1 | 735 | 4 | 721 | 0.0 | 1135 |
| MS.gene034324.t1 | AT1G05230 | 76.996 | 739 | 145 | 7 | 1 | 735 | 4 | 721 | 0.0 | 1135 |
| MS.gene034324.t1 | AT1G05230 | 76.996 | 739 | 145 | 7 | 1 | 735 | 4 | 721 | 0.0 | 1135 |
| MS.gene034324.t1 | AT1G05230 | 76.725 | 739 | 145 | 8 | 1 | 735 | 4 | 719 | 0.0 | 1125 |
| MS.gene034324.t1 | AT4G04890 | 73.867 | 750 | 166 | 10 | 1 | 734 | 4 | 739 | 0.0 | 1120 |
| MS.gene034324.t1 | AT4G04890 | 73.867 | 750 | 166 | 10 | 1 | 734 | 4 | 739 | 0.0 | 1120 |
| MS.gene034324.t1 | AT4G21750 | 72.099 | 767 | 174 | 8 | 1 | 735 | 4 | 762 | 0.0 | 1107 |
| MS.gene034324.t1 | AT4G21750 | 72.099 | 767 | 174 | 8 | 1 | 735 | 4 | 762 | 0.0 | 1107 |
| MS.gene034324.t1 | AT4G21750 | 72.099 | 767 | 174 | 8 | 1 | 735 | 4 | 762 | 0.0 | 1107 |
| MS.gene034324.t1 | AT4G21750 | 72.099 | 767 | 174 | 8 | 1 | 735 | 4 | 762 | 0.0 | 1107 |
| MS.gene034324.t1 | AT1G05230 | 75.487 | 616 | 131 | 6 | 1 | 612 | 4 | 603 | 0.0 | 937 |
| MS.gene034324.t1 | AT2G32370 | 53.846 | 702 | 288 | 12 | 39 | 727 | 39 | 717 | 0.0 | 745 |
| MS.gene034324.t1 | AT3G61150 | 51.135 | 749 | 316 | 8 | 21 | 730 | 66 | 803 | 0.0 | 739 |
| MS.gene034324.t1 | AT4G00730 | 53.709 | 728 | 300 | 13 | 23 | 733 | 94 | 801 | 0.0 | 734 |
| MS.gene034324.t1 | AT1G73360 | 47.845 | 696 | 338 | 9 | 60 | 735 | 28 | 718 | 0.0 | 643 |
| MS.gene034324.t1 | AT1G17920 | 47.076 | 701 | 334 | 12 | 45 | 731 | 5 | 682 | 0.0 | 618 |
| MS.gene034324.t1 | AT1G17920 | 47.076 | 701 | 334 | 12 | 45 | 731 | 5 | 682 | 0.0 | 618 |
| MS.gene034324.t1 | AT5G52170 | 45.504 | 734 | 329 | 15 | 13 | 730 | 5 | 683 | 0.0 | 609 |
| MS.gene034324.t1 | AT5G52170 | 45.640 | 734 | 323 | 17 | 13 | 730 | 5 | 678 | 0.0 | 605 |
| MS.gene034324.t1 | AT5G52170 | 45.640 | 734 | 323 | 17 | 13 | 730 | 5 | 678 | 0.0 | 605 |
| MS.gene034324.t1 | AT5G46880 | 45.404 | 718 | 343 | 18 | 57 | 735 | 104 | 811 | 0.0 | 603 |
| MS.gene034324.t1 | AT5G46880 | 45.404 | 718 | 343 | 18 | 57 | 735 | 104 | 811 | 0.0 | 603 |
| MS.gene034324.t1 | AT5G46880 | 45.404 | 718 | 343 | 18 | 57 | 735 | 104 | 811 | 0.0 | 603 |
| MS.gene034324.t1 | AT1G79840 | 42.714 | 700 | 337 | 14 | 52 | 733 | 92 | 745 | 0.0 | 555 |
| MS.gene034324.t1 | AT1G79840 | 42.714 | 700 | 337 | 14 | 52 | 733 | 34 | 687 | 0.0 | 554 |
| MS.gene034324.t1 | AT1G79840 | 42.714 | 700 | 337 | 14 | 52 | 733 | 34 | 687 | 0.0 | 554 |
| MS.gene034324.t1 | AT1G79840 | 42.714 | 700 | 337 | 14 | 52 | 733 | 121 | 774 | 0.0 | 553 |
| MS.gene034324.t1 | AT4G17710 | 42.258 | 691 | 329 | 17 | 54 | 734 | 77 | 707 | 3.57e-172 | 511 |
| MS.gene034324.t1 | AT1G79840 | 43.386 | 567 | 273 | 12 | 52 | 608 | 92 | 620 | 1.53e-155 | 466 |
| MS.gene034324.t1 | AT3G03260 | 38.732 | 710 | 392 | 18 | 45 | 731 | 6 | 695 | 7.36e-151 | 456 |
| MS.gene034324.t1 | AT4G00730 | 49.167 | 480 | 212 | 9 | 23 | 487 | 94 | 556 | 3.06e-146 | 439 |
| MS.gene034324.t1 | AT4G25530 | 37.353 | 680 | 394 | 11 | 55 | 730 | 31 | 682 | 1.59e-144 | 439 |
| MS.gene034324.t1 | AT5G17320 | 34.747 | 731 | 422 | 19 | 42 | 733 | 4 | 718 | 1.72e-127 | 396 |
| MS.gene034324.t1 | AT1G34650 | 34.233 | 704 | 404 | 15 | 71 | 733 | 23 | 708 | 5.33e-117 | 368 |
| MS.gene034324.t1 | AT3G03260 | 38.532 | 545 | 314 | 14 | 45 | 580 | 6 | 538 | 6.78e-112 | 350 |
| MS.gene034324.t1 | AT1G79840 | 42.601 | 446 | 208 | 11 | 52 | 487 | 92 | 499 | 1.02e-109 | 343 |
| MS.gene034324.t1 | AT5G07260 | 26.364 | 550 | 325 | 17 | 131 | 669 | 11 | 491 | 1.90e-43 | 165 |
| MS.gene034324.t1 | AT5G07260 | 26.230 | 549 | 322 | 17 | 131 | 669 | 11 | 486 | 5.36e-43 | 164 |
| MS.gene034324.t1 | AT1G52150 | 21.925 | 748 | 409 | 29 | 67 | 731 | 17 | 672 | 4.63e-22 | 102 |
| MS.gene034324.t1 | AT1G52150 | 21.925 | 748 | 409 | 29 | 67 | 731 | 17 | 672 | 8.96e-22 | 101 |
| MS.gene034324.t1 | AT1G52150 | 21.896 | 749 | 409 | 29 | 67 | 731 | 17 | 673 | 1.02e-21 | 101 |
| MS.gene034324.t1 | AT1G30490 | 22.441 | 508 | 295 | 18 | 295 | 731 | 199 | 678 | 1.56e-15 | 81.3 |
| MS.gene034324.t1 | AT4G26920 | 21.414 | 481 | 258 | 14 | 261 | 725 | 72 | 448 | 8.61e-14 | 74.7 |
| MS.gene034324.t1 | AT5G60690 | 25.000 | 304 | 192 | 10 | 295 | 581 | 190 | 474 | 3.16e-11 | 67.4 |
| MS.gene034324.t1 | AT5G60690 | 27.273 | 187 | 92 | 6 | 43 | 198 | 11 | 184 | 5.90e-11 | 66.6 |
Find 190 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCTTACGCTTCCATTTCT+TGG | 0.138519 | 2.4:-12451847 | None:intergenic |
| AAAATTTCCCCTAGGTTATA+TGG | 0.155848 | 2.4:+12454035 | MS.gene034324:intron |
| CACTTAAAACCAGCTGGTTT+TGG | 0.238060 | 2.4:-12453238 | None:intergenic |
| TAGCAATATGTGCCATTTCT+TGG | 0.247675 | 2.4:-12455396 | None:intergenic |
| ATATTCCTCTTCATTGAGTA+TGG | 0.259965 | 2.4:-12453188 | None:intergenic |
| GACTGTTGCATTTCAAATAT+TGG | 0.260496 | 2.4:+12456017 | MS.gene034324:CDS |
| GGCAGTAGTGGATGTTTCTT+TGG | 0.266653 | 2.4:+12453820 | MS.gene034324:CDS |
| TCCTTCCTTTGCTTGTCATC+AGG | 0.267823 | 2.4:-12452035 | None:intergenic |
| AATTCATCTTCACGGATTCT+TGG | 0.284298 | 2.4:-12451707 | None:intergenic |
| CACACGTGGACAACACTTTC+AGG | 0.288181 | 2.4:+12454459 | MS.gene034324:CDS |
| TACAAGCAGCTTGTTAGTTC+TGG | 0.292041 | 2.4:+12454100 | MS.gene034324:CDS |
| AAGGAACTGAGCAGAGAGTT+AGG | 0.301450 | 2.4:+12452053 | MS.gene034324:CDS |
| ACAATGCCAGCTGGTCTTCC+TGG | 0.308126 | 2.4:-12454531 | None:intergenic |
| AGCCATTACAAGTGAAGTTT+TGG | 0.309939 | 2.4:+12452081 | MS.gene034324:CDS |
| GTCTTTCACATTGTCGATCT+AGG | 0.317831 | 2.4:-12454156 | None:intergenic |
| GAACTCGGCATTGGTGGTTT+CGG | 0.320296 | 2.4:+12452986 | MS.gene034324:CDS |
| TTGTACTGTTGAGAGGATTA+AGG | 0.330586 | 2.4:+12456104 | MS.gene034324:CDS |
| TACATATCTCCTCCCATTCC+TGG | 0.333263 | 2.4:-12453016 | None:intergenic |
| AATCAAGAAGCTGCTAATTC+AGG | 0.336353 | 2.4:+12451764 | MS.gene034324:CDS |
| AGGATTAAGGCTTCTTTGTC+TGG | 0.337763 | 2.4:+12456117 | MS.gene034324:CDS |
| GCAACCAGAAGGCCTTCTTC+TGG | 0.341248 | 2.4:-12453873 | None:intergenic |
| GGAGGAGGTGTTGGTGAAAC+TGG | 0.354741 | 2.4:+12455973 | MS.gene034324:CDS |
| TGTCCAGCTTCCATTAGATT+TGG | 0.355568 | 2.4:-12451620 | None:intergenic |
| TTTGGTGTGGTTGTCCCATC+TGG | 0.359343 | 2.4:-12455949 | None:intergenic |
| GTAATATCAACATGTTGCTT+TGG | 0.360562 | 2.4:-12455795 | None:intergenic |
| TTCTCTAAACCTCATGTTAT+CGG | 0.361729 | 2.4:-12452282 | None:intergenic |
| CCTTCCTTTGCTTGTCATCA+GGG | 0.367415 | 2.4:-12452034 | None:intergenic |
| ATTGCTAATGGAAGAGATAC+TGG | 0.369741 | 2.4:+12455412 | MS.gene034324:CDS |
| GGAAGAAGTGCTACATAATC+TGG | 0.371226 | 2.4:-12455907 | None:intergenic |
| GTGCTATCAACTGGGGTGGC+AGG | 0.373210 | 2.4:+12453541 | MS.gene034324:CDS |
| TTCGACAGTGCTACAAAATC+TGG | 0.373686 | 2.4:+12451731 | MS.gene034324:CDS |
| TATGTAGCACTTCTTCCATC+TGG | 0.375152 | 2.4:+12455913 | MS.gene034324:CDS |
| GGCAAAACTTTCTCTTGGTT+CGG | 0.376070 | 2.4:+12456056 | MS.gene034324:CDS |
| CACTGGCTTTCCTACGTACT+TGG | 0.377299 | 2.4:-12452915 | None:intergenic |
| GTTAGTTCTGGACATGCATT+TGG | 0.380690 | 2.4:+12454112 | MS.gene034324:CDS |
| CTGGATCTGGCAGAAGGACT+AGG | 0.382500 | 2.4:-12453854 | None:intergenic |
| GAATGTATACCTCTTCTCTA+AGG | 0.384454 | 2.4:-12452400 | None:intergenic |
| ACACTGGAAGTGCTATCAAC+TGG | 0.386707 | 2.4:+12453532 | MS.gene034324:CDS |
| CTGGGTCATCTACACTCTTA+CGG | 0.388294 | 2.4:-12454512 | None:intergenic |
| GCAATGAATGTGGTTCTAAA+TGG | 0.388547 | 2.4:+12455877 | MS.gene034324:CDS |
| GAAATGGCACATATTGCTAA+TGG | 0.396088 | 2.4:+12455400 | MS.gene034324:CDS |
| ACATACTCTTTCTCCCATCT+TGG | 0.396801 | 2.4:-12454377 | None:intergenic |
| ACTCATTGGAATGGCACAAA+TGG | 0.397042 | 2.4:+12453129 | MS.gene034324:CDS |
| GCAGTTGGTCCACCACAATT+AGG | 0.400312 | 2.4:-12452326 | None:intergenic |
| ATAACCTTTGAGTAGCCATT+TGG | 0.403234 | 2.4:-12453911 | None:intergenic |
| ACTGCTAGCTCAATTATCAT+TGG | 0.404803 | 2.4:-12453091 | None:intergenic |
| ATTTCAAATATTGGTTGATT+CGG | 0.406456 | 2.4:+12456026 | MS.gene034324:CDS |
| AAATTTCCCCTAGGTTATAT+GGG | 0.407762 | 2.4:+12454036 | MS.gene034324:intron |
| CTTTGGTTGCCTACACTTGA+AGG | 0.408059 | 2.4:+12453160 | MS.gene034324:CDS |
| CTTTGCTTGTCATCAGGGTG+TGG | 0.418881 | 2.4:-12452029 | None:intergenic |
| TGGGTCATCTACACTCTTAC+GGG | 0.423400 | 2.4:-12454511 | None:intergenic |
| TCACCAACACCTCCTCCATT+TGG | 0.438216 | 2.4:-12455967 | None:intergenic |
| AATGTTCCAGCCAAATCTAA+TGG | 0.438842 | 2.4:+12451610 | None:intergenic |
| CCAACGGCAAAACTTTCTCT+TGG | 0.441531 | 2.4:+12456051 | MS.gene034324:CDS |
| GCACAGGAGCTGATGATGTA+AGG | 0.441905 | 2.4:+12454481 | MS.gene034324:CDS |
| AGCAACATGCTGATGGAACT+TGG | 0.445791 | 2.4:+12453798 | MS.gene034324:CDS |
| CCTCTAGAACTCGGCATTGG+TGG | 0.447065 | 2.4:+12452980 | MS.gene034324:CDS |
| TTCTCTTGGTTCGGTTGCTA+CGG | 0.447827 | 2.4:+12456065 | MS.gene034324:CDS |
| AGAAGGCCTTCTTCTGGATC+TGG | 0.453379 | 2.4:-12453867 | None:intergenic |
| AACCAAAACTTCACTTGTAA+TGG | 0.453525 | 2.4:-12452083 | None:intergenic |
| ACAGCATCAGATCCAAGAAA+TGG | 0.457226 | 2.4:+12451835 | MS.gene034324:CDS |
| TGAGCTAGCAGTTGCTGCTA+TGG | 0.464050 | 2.4:+12453102 | MS.gene034324:CDS |
| TTCTTGGACAACTCCACCAT+TGG | 0.466612 | 2.4:-12455380 | None:intergenic |
| GATGGGACAACCACACCAAA+TGG | 0.467628 | 2.4:+12455952 | MS.gene034324:CDS |
| CTCTCTCTAGTTGGCACAAG+TGG | 0.472336 | 2.4:-12453755 | None:intergenic |
| TGGTGGAGTTGTCCAAGAAA+TGG | 0.474459 | 2.4:+12455384 | MS.gene034324:CDS |
| GGAGGAGATATGTATGGAGC+TGG | 0.474886 | 2.4:+12453025 | MS.gene034324:CDS |
| TCAATGAAGAGGAATATGTT+AGG | 0.476700 | 2.4:+12453194 | MS.gene034324:CDS |
| GGGCGAGGAGGAACCGATGA+AGG | 0.476736 | 2.4:-12452959 | None:intergenic |
| ACAAAATAACTCTCTCTAGT+TGG | 0.477153 | 2.4:-12453764 | None:intergenic |
| TTCGGAGGACAACCAGGAAT+GGG | 0.477190 | 2.4:+12453004 | MS.gene034324:CDS |
| TCTTTCACATTGTCGATCTA+GGG | 0.482839 | 2.4:-12454155 | None:intergenic |
| TGTCGAATAATTCATCTTCA+CGG | 0.483352 | 2.4:-12451715 | None:intergenic |
| TCCTACGTACTTGGCAGCAA+TGG | 0.502677 | 2.4:-12452906 | None:intergenic |
| GAGAGTTGTACGGATTCAAC+AGG | 0.503171 | 2.4:+12455820 | MS.gene034324:CDS |
| CGCCCTCTAGAACTCGGCAT+TGG | 0.503902 | 2.4:+12452977 | MS.gene034324:CDS |
| CACTGGAAGTGCTATCAACT+GGG | 0.506183 | 2.4:+12453533 | MS.gene034324:CDS |
| AGATCCAGAAGAAGGCCTTC+TGG | 0.506911 | 2.4:+12453869 | MS.gene034324:CDS |
| GGCGAGGAGGAACCGATGAA+GGG | 0.507726 | 2.4:-12452958 | None:intergenic |
| CAATGCCAGCTGGTCTTCCT+GGG | 0.508862 | 2.4:-12454530 | None:intergenic |
| CTCATTGGAATGGCACAAAT+GGG | 0.511283 | 2.4:+12453130 | MS.gene034324:CDS |
| CAGAGAAAACTGTGGACCAT+TGG | 0.512102 | 2.4:-12453489 | None:intergenic |
| TTAATTCAAGAAATGCCAAA+TGG | 0.513645 | 2.4:+12453896 | MS.gene034324:CDS |
| TTTCGGAGGACAACCAGGAA+TGG | 0.514423 | 2.4:+12453003 | MS.gene034324:CDS |
| TGCTATCAACTGGGGTGGCA+GGG | 0.518257 | 2.4:+12453542 | MS.gene034324:CDS |
| AGGAACTGAGCAGAGAGTTA+GGG | 0.519123 | 2.4:+12452054 | MS.gene034324:CDS |
| GCTGCTATGGAGGAACTCAT+TGG | 0.520147 | 2.4:+12453115 | MS.gene034324:CDS |
| TTGTGGTTTATAAGAACCAA+TGG | 0.522609 | 2.4:+12453473 | MS.gene034324:intron |
| GCTTCACACTTAAAACCAGC+TGG | 0.523425 | 2.4:-12453244 | None:intergenic |
| TCCACTACTCTCCCCTTCAT+CGG | 0.525289 | 2.4:+12452946 | MS.gene034324:CDS |
| TTCATTGCAACTATGTCTAC+AGG | 0.525326 | 2.4:-12455862 | None:intergenic |
| CAGCCAAATCTAATGGAAGC+TGG | 0.529949 | 2.4:+12451617 | None:intergenic |
| TGTGGGAATGTTTGTTGCCA+TGG | 0.531917 | 2.4:-12454188 | None:intergenic |
| GTATACCTCTTCTCTAAGGC+GGG | 0.534397 | 2.4:-12452396 | None:intergenic |
| GAACAAACGTACTCAAATGA+AGG | 0.534903 | 2.4:+12452109 | MS.gene034324:CDS |
| GGTGAAACTGGACACGGTGG+TGG | 0.535930 | 2.4:+12455985 | MS.gene034324:CDS |
| GATATTACAAGAGAGTTGTA+CGG | 0.536286 | 2.4:+12455810 | MS.gene034324:CDS |
| CACAAATGGGTGATCCACTT+TGG | 0.540052 | 2.4:+12453143 | MS.gene034324:CDS |
| GCGAGGAGGAACCGATGAAG+GGG | 0.541185 | 2.4:-12452957 | None:intergenic |
| GACATTTCTCCGATGGCAGT+TGG | 0.544696 | 2.4:-12452341 | None:intergenic |
| AAATTCCCGCCTTAGAGAAG+AGG | 0.547209 | 2.4:+12452391 | MS.gene034324:CDS |
| CTAGTTGGCACAAGTGGTGA+AGG | 0.548358 | 2.4:-12453749 | None:intergenic |
| GCTTCTTGTCCTAATTGTGG+TGG | 0.548941 | 2.4:+12452317 | MS.gene034324:CDS |
| CTCGGCATTGGTGGTTTCGG+AGG | 0.549851 | 2.4:+12452989 | MS.gene034324:CDS |
| GGAATGGGAGGAGATATGTA+TGG | 0.550014 | 2.4:+12453019 | MS.gene034324:CDS |
| TTATTGCTTGTACTGTTGAG+AGG | 0.553910 | 2.4:+12456097 | MS.gene034324:CDS |
| CCACCAATGCCGAGTTCTAG+AGG | 0.555033 | 2.4:-12452980 | None:intergenic |
| ATTGGTTGATTCGGTTCCAA+CGG | 0.555616 | 2.4:+12456035 | MS.gene034324:CDS |
| ATCAAACGACATTTCTCCGA+TGG | 0.559536 | 2.4:-12452348 | None:intergenic |
| CTTCTGCCAGATCCAGAAGA+AGG | 0.560942 | 2.4:+12453861 | MS.gene034324:CDS |
| ACACCAAATGGAGGAGGTGT+TGG | 0.560944 | 2.4:+12455964 | MS.gene034324:CDS |
| CTTCTTCTGGATCTGGCAGA+AGG | 0.561436 | 2.4:-12453860 | None:intergenic |
| AACACCTCCTCCATTTGGTG+TGG | 0.563793 | 2.4:-12455962 | None:intergenic |
| GGAATTGGTCCAAAACCAGC+TGG | 0.564202 | 2.4:+12453229 | MS.gene034324:CDS |
| GGATTTGCTATACTTCCAGA+TGG | 0.564453 | 2.4:+12455934 | MS.gene034324:CDS |
| TATTGTAAGCAACATGCTGA+TGG | 0.566221 | 2.4:+12453791 | MS.gene034324:CDS |
| ATGTGCATAAGCTTCTGTGC+TGG | 0.567127 | 2.4:+12454417 | MS.gene034324:CDS |
| ATGGGTTGAGCATGTTGAAG+TGG | 0.567383 | 2.4:+12454054 | MS.gene034324:CDS |
| TAGTGATAACAAACCAAGAT+GGG | 0.567631 | 2.4:+12454364 | MS.gene034324:intron |
| TGGATCTGGCAGAAGGACTA+GGG | 0.567829 | 2.4:-12453853 | None:intergenic |
| TCTTGAATTAAGCAACCAGA+AGG | 0.568304 | 2.4:-12453884 | None:intergenic |
| ATGCCGAGTTCTAGAGGGCG+AGG | 0.568671 | 2.4:-12452974 | None:intergenic |
| ATGCATTTGGTGCAAAACGT+TGG | 0.570053 | 2.4:+12454125 | MS.gene034324:CDS |
| TGTGGTGGACCAACTGCCAT+CGG | 0.570061 | 2.4:+12452332 | MS.gene034324:CDS |
| GGTGGTTTCGGAGGACAACC+AGG | 0.570493 | 2.4:+12452998 | MS.gene034324:CDS |
| GATGACCCAGGAAGACCAGC+TGG | 0.571107 | 2.4:+12454525 | MS.gene034324:CDS |
| GATCTTCTTAGATCAATAAG+TGG | 0.572048 | 2.4:+12453049 | MS.gene034324:CDS |
| TTAGTGATAACAAACCAAGA+TGG | 0.574822 | 2.4:+12454363 | MS.gene034324:intron |
| ATTGGTTTATCAGCTTCAGT+AGG | 0.576989 | 2.4:-12453073 | None:intergenic |
| TAACCTTGTTGAGATTCTCA+TGG | 0.576995 | 2.4:+12453303 | MS.gene034324:CDS |
| CACAGGAGCTGATGATGTAA+GGG | 0.577558 | 2.4:+12454482 | MS.gene034324:CDS |
| GCACTTAGAACAATGCCAGC+TGG | 0.578109 | 2.4:-12454540 | None:intergenic |
| ACCGATGAAGGGGAGAGTAG+TGG | 0.579805 | 2.4:-12452947 | None:intergenic |
| CCTCCTCGCCCTCTAGAACT+CGG | 0.581323 | 2.4:+12452971 | MS.gene034324:CDS |
| AACATTCCCACAGTCGATGT+TGG | 0.581462 | 2.4:+12454199 | MS.gene034324:CDS |
| TGTCCACGTGTGTGCTGTTG+AGG | 0.582831 | 2.4:-12454448 | None:intergenic |
| TGAATGTGGTTCTAAATGGA+GGG | 0.584402 | 2.4:+12455881 | MS.gene034324:CDS |
| TGTTGAGATTCTCATGGATG+TGG | 0.587472 | 2.4:+12453309 | MS.gene034324:CDS |
| TGGGATATCCTTTCCAATGG+TGG | 0.588001 | 2.4:+12455367 | MS.gene034324:CDS |
| CGTTTGATGAACATCACTTG+AGG | 0.589246 | 2.4:+12452363 | MS.gene034324:CDS |
| AATGCTTCTTGTCCTAATTG+TGG | 0.590261 | 2.4:+12452314 | MS.gene034324:CDS |
| GGATCTGATGCTGTGTATGA+CGG | 0.590628 | 2.4:-12451826 | None:intergenic |
| CCCTGATGACAAGCAAAGGA+AGG | 0.591678 | 2.4:+12452034 | MS.gene034324:CDS |
| AGTAGTGGATAGCTCACCAC+TGG | 0.592239 | 2.4:-12452932 | None:intergenic |
| GCTAGCAGTTGCTGCTATGG+AGG | 0.593019 | 2.4:+12453105 | MS.gene034324:CDS |
| TGGACAACACTTTCAGGCAC+AGG | 0.595843 | 2.4:+12454465 | MS.gene034324:CDS |
| TGTATACCTCTTCTCTAAGG+CGG | 0.598180 | 2.4:-12452397 | None:intergenic |
| GCAACATGCTGATGGAACTT+GGG | 0.599510 | 2.4:+12453799 | MS.gene034324:CDS |
| ATGGAACCTCCTTCAAGTGT+AGG | 0.599518 | 2.4:-12453169 | None:intergenic |
| GAATGTGGTTCTAAATGGAG+GGG | 0.601539 | 2.4:+12455882 | MS.gene034324:CDS |
| GGACAACTCCACCATTGGAA+AGG | 0.603145 | 2.4:-12455375 | None:intergenic |
| AATGCCAAATGGCTACTCAA+AGG | 0.605118 | 2.4:+12453907 | MS.gene034324:CDS |
| TGTCTCAAGAGCAATGACAC+TGG | 0.606529 | 2.4:+12453516 | MS.gene034324:CDS |
| ATTCCCACAGTCGATGTTGG+CGG | 0.607641 | 2.4:+12454202 | MS.gene034324:CDS |
| GGTACCGCCAACATCGACTG+TGG | 0.611425 | 2.4:-12454206 | None:intergenic |
| CACCAATGCCGAGTTCTAGA+GGG | 0.615823 | 2.4:-12452979 | None:intergenic |
| AACTTCGTGCCGATAACATG+AGG | 0.617798 | 2.4:+12452273 | MS.gene034324:CDS |
| CACACCCTGATGACAAGCAA+AGG | 0.619885 | 2.4:+12452030 | MS.gene034324:CDS |
| CAGTGGGATATCCTTTCCAA+TGG | 0.619986 | 2.4:+12455364 | MS.gene034324:intron |
| GGAAGTATAGCAAATCCAGA+TGG | 0.620130 | 2.4:-12455928 | None:intergenic |
| AGGTTCCATACTCAATGAAG+AGG | 0.621981 | 2.4:+12453183 | MS.gene034324:CDS |
| TATGGAGGAACTCATTGGAA+TGG | 0.622262 | 2.4:+12453120 | MS.gene034324:CDS |
| TGATGGAACTTGGGCAGTAG+TGG | 0.623796 | 2.4:+12453808 | MS.gene034324:CDS |
| GTTTGCAGACTCAACAGGAG+AGG | 0.625915 | 2.4:+12452216 | MS.gene034324:intron |
| GATTTGCTATACTTCCAGAT+GGG | 0.631821 | 2.4:+12455935 | MS.gene034324:CDS |
| TAACGTTTCTTCTTAGCACG+AGG | 0.632532 | 2.4:-12451800 | None:intergenic |
| GGAAGTGCTATCAACTGGGG+TGG | 0.632566 | 2.4:+12453537 | MS.gene034324:CDS |
| GGAGGACAACCAGGAATGGG+AGG | 0.639321 | 2.4:+12453007 | MS.gene034324:CDS |
| TCAAGTGTAGGCAACCAAAG+TGG | 0.640121 | 2.4:-12453157 | None:intergenic |
| CTACAATGGTGCATTACAAG+TGG | 0.640429 | 2.4:+12453567 | MS.gene034324:CDS |
| GTACCGCCAACATCGACTGT+GGG | 0.642719 | 2.4:-12454205 | None:intergenic |
| ACAACCACACCAAATGGAGG+AGG | 0.644018 | 2.4:+12455958 | MS.gene034324:CDS |
| GTGCCTCAACAGCACACACG+TGG | 0.644853 | 2.4:+12454445 | MS.gene034324:CDS |
| ATGAATGTGGTTCTAAATGG+AGG | 0.647763 | 2.4:+12455880 | MS.gene034324:CDS |
| GGGGTGGCAGGGAACTACAA+TGG | 0.649866 | 2.4:+12453553 | MS.gene034324:CDS |
| TGGTTGCCTACACTTGAAGG+AGG | 0.652894 | 2.4:+12453163 | MS.gene034324:CDS |
| AGATGAAAACTCAAGAAGTG+AGG | 0.655242 | 2.4:+12454617 | MS.gene034324:CDS |
| CATGTTGAAGTGGATGATAG+AGG | 0.665308 | 2.4:+12454064 | MS.gene034324:CDS |
| GGGACAACCACACCAAATGG+AGG | 0.673800 | 2.4:+12455955 | MS.gene034324:CDS |
| CATCCATGAGAATCTCAACA+AGG | 0.674971 | 2.4:-12453306 | None:intergenic |
| CGTAAGAGTGTAGATGACCC+AGG | 0.679064 | 2.4:+12454513 | MS.gene034324:CDS |
| GCCATTGCTGCCAAGTACGT+AGG | 0.683580 | 2.4:+12452905 | MS.gene034324:CDS |
| CCGAGTTCTAGAGGGCGAGG+AGG | 0.684847 | 2.4:-12452971 | None:intergenic |
| TGAAAGACTTGCTAGTGCCA+TGG | 0.696212 | 2.4:+12454171 | MS.gene034324:CDS |
| CAAGTACGTAGGAAAGCCAG+TGG | 0.711066 | 2.4:+12452916 | MS.gene034324:CDS |
| AGACATAGTTGCAATGAATG+TGG | 0.720864 | 2.4:+12455867 | MS.gene034324:CDS |
| GACAATGCCAGAGAAAACTG+TGG | 0.735059 | 2.4:-12453497 | None:intergenic |
| ACTGGAAGTGCTATCAACTG+GGG | 0.765115 | 2.4:+12453534 | MS.gene034324:CDS |
| GTTGGTGAAACTGGACACGG+TGG | 0.765833 | 2.4:+12455982 | MS.gene034324:CDS |
| GGTGTTGGTGAAACTGGACA+CGG | 0.766330 | 2.4:+12455979 | MS.gene034324:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAATGATATAAAAATAAAAA+TGG | + | chr2.4:12455194-12455213 | MS.gene034324:intron | 10.0% |
| !!! | GGATTTTTTTATTTTATTTT+TGG | + | chr2.4:12452154-12452173 | MS.gene034324:intron | 10.0% |
| !!! | TTTTGTTAAATTAATTTATG+TGG | + | chr2.4:12451976-12451995 | MS.gene034324:intron | 10.0% |
| !! | AATTTGTAAGAAAAACTATA+AGG | - | chr2.4:12455117-12455136 | None:intergenic | 15.0% |
| !!! | ATAGTTTTTCTTACAAATTA+GGG | + | chr2.4:12455118-12455137 | MS.gene034324:intron | 15.0% |
| !!! | ATTTGATTTTATTAATTTGG+AGG | + | chr2.4:12452133-12452152 | MS.gene034324:intron | 15.0% |
| !!! | ATTTTAACCTTCTTTAATTT+TGG | + | chr2.4:12452854-12452873 | MS.gene034324:intron | 15.0% |
| !!! | CATAGAATGATATTTTTTTT+TGG | + | chr2.4:12452194-12452213 | MS.gene034324:intron | 15.0% |
| !!! | GGTATTTGATTTTATTAATT+TGG | + | chr2.4:12452130-12452149 | MS.gene034324:intron | 15.0% |
| !!! | TATAGTTTTTCTTACAAATT+AGG | + | chr2.4:12455117-12455136 | MS.gene034324:intron | 15.0% |
| !!! | TTATCTAATCTTAAAGTTTT+AGG | + | chr2.4:12454690-12454709 | MS.gene034324:intron | 15.0% |
| !!! | TTCAATTTAGATTTTTCATA+GGG | - | chr2.4:12455704-12455723 | None:intergenic | 15.0% |
| !!! | TTTAACTGTTTTTTCTTTTT+TGG | + | chr2.4:12451951-12451970 | MS.gene034324:intron | 15.0% |
| !!! | TTTCAATTTAGATTTTTCAT+AGG | - | chr2.4:12455705-12455724 | None:intergenic | 15.0% |
| !!! | TTTTTATATCATTGTGTAAT+TGG | - | chr2.4:12455188-12455207 | None:intergenic | 15.0% |
| !! | AATCTAAATTGAAAATGTCT+TGG | + | chr2.4:12455711-12455730 | MS.gene034324:intron | 20.0% |
| !! | AATGAATATTCGATCAAAAT+TGG | - | chr2.4:12455653-12455672 | None:intergenic | 20.0% |
| !! | AGATGACATAAGATAAAAAA+AGG | - | chr2.4:12454994-12455013 | None:intergenic | 20.0% |
| !! | ATGGTATAAAAATAACCAAA+AGG | + | chr2.4:12455213-12455232 | MS.gene034324:intron | 20.0% |
| !! | ATTAACACCAAAATTAAAGA+AGG | - | chr2.4:12452864-12452883 | None:intergenic | 20.0% |
| !! | ATTATAGAGTCTTCATTAAA+AGG | - | chr2.4:12454948-12454967 | None:intergenic | 20.0% |
| !! | GATGACATAAGATAAAAAAA+GGG | - | chr2.4:12454993-12455012 | None:intergenic | 20.0% |
| !!! | AGAAATTCAAAAACTCTTTT+TGG | - | chr2.4:12454594-12454613 | None:intergenic | 20.0% |
| !!! | ATGTACTGATTTTTTTTACT+AGG | - | chr2.4:12455065-12455084 | None:intergenic | 20.0% |
| !!! | ATTTCAAATATTGGTTGATT+CGG | + | chr2.4:12456026-12456045 | MS.gene034324:CDS | 20.0% |
| !!! | CAAAAATTTGTTCAAGAATT+TGG | - | chr2.4:12455242-12455261 | None:intergenic | 20.0% |
| !!! | CTTTAAGATTAGATAATGAT+TGG | - | chr2.4:12454686-12454705 | None:intergenic | 20.0% |
| !!! | TGTACTGATTTTTTTTACTA+GGG | - | chr2.4:12455064-12455083 | None:intergenic | 20.0% |
| !!! | TTGTGTAATTGGATATTTTA+TGG | - | chr2.4:12455177-12455196 | None:intergenic | 20.0% |
| !!! | TTGTTTGTTTAGGTTTTTTA+AGG | + | chr2.4:12452001-12452020 | MS.gene034324:intron | 20.0% |
| !!! | TTTTTAAAAAAATTTCCCCT+AGG | + | chr2.4:12454027-12454046 | MS.gene034324:intron | 20.0% |
| ! | AAGCAATTGATATAAGATGA+TGG | - | chr2.4:12454868-12454887 | None:intergenic | 25.0% |
| ! | AATATTCGATCAAAATTGGA+CGG | - | chr2.4:12455649-12455668 | None:intergenic | 25.0% |
| ! | ATCGAAGCCTATATATTTAT+GGG | + | chr2.4:12452577-12452596 | MS.gene034324:intron | 25.0% |
| ! | GATAGAGATAGAATAACAAT+AGG | - | chr2.4:12452803-12452822 | None:intergenic | 25.0% |
| ! | TATAACGGTTTGATCAAAAT+TGG | + | chr2.4:12455568-12455587 | MS.gene034324:intron | 25.0% |
| ! | TATGAGATTGAAATGAACAA+TGG | + | chr2.4:12452613-12452632 | MS.gene034324:intron | 25.0% |
| ! | TCATGAAAAATTCCATCAAA+AGG | - | chr2.4:12454323-12454342 | None:intergenic | 25.0% |
| ! | TTAATTCAAGAAATGCCAAA+TGG | + | chr2.4:12453896-12453915 | MS.gene034324:CDS | 25.0% |
| ! | TTGCATTATTGTGTTATCAT+AGG | + | chr2.4:12454713-12454732 | MS.gene034324:intron | 25.0% |
| !! | AATTCAAAAACTCTTTTTGG+TGG | - | chr2.4:12454591-12454610 | None:intergenic | 25.0% |
| !! | GATTGATGCGATATTAATTT+TGG | - | chr2.4:12452656-12452675 | None:intergenic | 25.0% |
| !! | GTGTTAATTTTCAGATTGAT+AGG | + | chr2.4:12452876-12452895 | MS.gene034324:intron | 25.0% |
| !!! | CTTGATTATTTTTCTCTATG+TGG | + | chr2.4:12453987-12454006 | MS.gene034324:intron | 25.0% |
| !!! | TTATGTGGTTTTGTTTGTTT+AGG | + | chr2.4:12451991-12452010 | MS.gene034324:intron | 25.0% |
| !!! | TTTTTGGTTGAAAAATGAAG+AGG | + | chr2.4:12452170-12452189 | MS.gene034324:intron | 25.0% |
| !!! | TTTTTTCTTCTTCCTTTTGA+TGG | + | chr2.4:12454308-12454327 | MS.gene034324:intron | 25.0% |
| AAAATTTCCCCTAGGTTATA+TGG | + | chr2.4:12454035-12454054 | MS.gene034324:intron | 30.0% | |
| AAATTTCCCCTAGGTTATAT+GGG | + | chr2.4:12454036-12454055 | MS.gene034324:intron | 30.0% | |
| AACCAAAACTTCACTTGTAA+TGG | - | chr2.4:12452086-12452105 | None:intergenic | 30.0% | |
| ACAAAATAACTCTCTCTAGT+TGG | - | chr2.4:12453767-12453786 | None:intergenic | 30.0% | |
| ATAGAGTCTTCATTAAAAGG+AGG | - | chr2.4:12454945-12454964 | None:intergenic | 30.0% | |
| ATATTCCTCTTCATTGAGTA+TGG | - | chr2.4:12453191-12453210 | None:intergenic | 30.0% | |
| CAGAAATTACACCAAGTTTA+TGG | + | chr2.4:12452435-12452454 | MS.gene034324:intron | 30.0% | |
| GAATTATGCATTCACACATT+TGG | - | chr2.4:12455682-12455701 | None:intergenic | 30.0% | |
| GACTGTTGCATTTCAAATAT+TGG | + | chr2.4:12456017-12456036 | MS.gene034324:CDS | 30.0% | |
| GATATTACAAGAGAGTTGTA+CGG | + | chr2.4:12455810-12455829 | MS.gene034324:CDS | 30.0% | |
| GATCGAAGCCTATATATTTA+TGG | + | chr2.4:12452576-12452595 | MS.gene034324:intron | 30.0% | |
| GATCTTCTTAGATCAATAAG+TGG | + | chr2.4:12453049-12453068 | MS.gene034324:CDS | 30.0% | |
| TAAAACATACATCAAGGTCT+TGG | + | chr2.4:12452510-12452529 | MS.gene034324:intron | 30.0% | |
| TAGTGATAACAAACCAAGAT+GGG | + | chr2.4:12454364-12454383 | MS.gene034324:intron | 30.0% | |
| TCAAACGCCCATAAATATAT+AGG | - | chr2.4:12452587-12452606 | None:intergenic | 30.0% | |
| TCAATGAAGAGGAATATGTT+AGG | + | chr2.4:12453194-12453213 | MS.gene034324:CDS | 30.0% | |
| TGTCGAATAATTCATCTTCA+CGG | - | chr2.4:12451718-12451737 | None:intergenic | 30.0% | |
| TTAGTGATAACAAACCAAGA+TGG | + | chr2.4:12454363-12454382 | MS.gene034324:intron | 30.0% | |
| TTCGGCTCAAATATCTATAA+CGG | + | chr2.4:12455553-12455572 | MS.gene034324:intron | 30.0% | |
| TTCTCTAAACCTCATGTTAT+CGG | - | chr2.4:12452285-12452304 | None:intergenic | 30.0% | |
| TTGTGGTTTATAAGAACCAA+TGG | + | chr2.4:12453473-12453492 | MS.gene034324:intron | 30.0% | |
| ! | GTAATATCAACATGTTGCTT+TGG | - | chr2.4:12455798-12455817 | None:intergenic | 30.0% |
| ! | TGGACTTTTCAATTCAAACT+CGG | + | chr2.4:12455588-12455607 | MS.gene034324:intron | 30.0% |
| !! | GAGTAGTGTTTTTGTAGTAT+TGG | - | chr2.4:12454230-12454249 | None:intergenic | 30.0% |
| !! | TTGTTTTGTGTCATGTCAAA+TGG | - | chr2.4:12451662-12451681 | None:intergenic | 30.0% |
| !!! | ATGTATGTTTTAACTGCGTT+TGG | - | chr2.4:12452502-12452521 | None:intergenic | 30.0% |
| !!! | TGACACTATTTTTGTTCTTG+TGG | + | chr2.4:12453456-12453475 | MS.gene034324:intron | 30.0% |
| AATCAAGAAGCTGCTAATTC+AGG | + | chr2.4:12451764-12451783 | MS.gene034324:CDS | 35.0% | |
| AATGCTTCTTGTCCTAATTG+TGG | + | chr2.4:12452314-12452333 | MS.gene034324:CDS | 35.0% | |
| AATTCATCTTCACGGATTCT+TGG | - | chr2.4:12451710-12451729 | None:intergenic | 35.0% | |
| ACTGCTAGCTCAATTATCAT+TGG | - | chr2.4:12453094-12453113 | None:intergenic | 35.0% | |
| AGACATAGTTGCAATGAATG+TGG | + | chr2.4:12455867-12455886 | MS.gene034324:CDS | 35.0% | |
| AGATGAAAACTCAAGAAGTG+AGG | + | chr2.4:12454617-12454636 | MS.gene034324:CDS | 35.0% | |
| ATAACCTTTGAGTAGCCATT+TGG | - | chr2.4:12453914-12453933 | None:intergenic | 35.0% | |
| ATATTTGAGCCGAATGAATG+TGG | - | chr2.4:12455547-12455566 | None:intergenic | 35.0% | |
| ATTGCTAATGGAAGAGATAC+TGG | + | chr2.4:12455412-12455431 | MS.gene034324:CDS | 35.0% | |
| CGCAGTTAAAACATACATCA+AGG | + | chr2.4:12452504-12452523 | MS.gene034324:intron | 35.0% | |
| GAAATGGCACATATTGCTAA+TGG | + | chr2.4:12455400-12455419 | MS.gene034324:CDS | 35.0% | |
| GAACAAACGTACTCAAATGA+AGG | + | chr2.4:12452109-12452128 | MS.gene034324:CDS | 35.0% | |
| GAATGTATACCTCTTCTCTA+AGG | - | chr2.4:12452403-12452422 | None:intergenic | 35.0% | |
| TAACCTTGTTGAGATTCTCA+TGG | + | chr2.4:12453303-12453322 | MS.gene034324:CDS | 35.0% | |
| TATCAATCGCACCATAAACT+TGG | - | chr2.4:12452449-12452468 | None:intergenic | 35.0% | |
| TATTGTAAGCAACATGCTGA+TGG | + | chr2.4:12453791-12453810 | MS.gene034324:CDS | 35.0% | |
| TATTTGAGCCGAATGAATGT+GGG | - | chr2.4:12455546-12455565 | None:intergenic | 35.0% | |
| TCTTCATTAAAAGGAGGAGT+CGG | - | chr2.4:12454939-12454958 | None:intergenic | 35.0% | |
| TCTTGAATTAAGCAACCAGA+AGG | - | chr2.4:12453887-12453906 | None:intergenic | 35.0% | |
| TCTTTCACATTGTCGATCTA+GGG | - | chr2.4:12454158-12454177 | None:intergenic | 35.0% | |
| TGCAAATTCCCACATTCATT+CGG | + | chr2.4:12455535-12455554 | MS.gene034324:intron | 35.0% | |
| TTATTGCTTGTACTGTTGAG+AGG | + | chr2.4:12456097-12456116 | MS.gene034324:CDS | 35.0% | |
| TTCATTGCAACTATGTCTAC+AGG | - | chr2.4:12455865-12455884 | None:intergenic | 35.0% | |
| TTGTACTGTTGAGAGGATTA+AGG | + | chr2.4:12456104-12456123 | MS.gene034324:CDS | 35.0% | |
| TTTCAACTCTCGAAAACAGT+GGG | + | chr2.4:12455348-12455367 | MS.gene034324:intron | 35.0% | |
| ! | AACACTACTCTTTCTCGTTT+TGG | + | chr2.4:12454240-12454259 | MS.gene034324:intron | 35.0% |
| ! | AGCCATTACAAGTGAAGTTT+TGG | + | chr2.4:12452081-12452100 | MS.gene034324:CDS | 35.0% |
| ! | ATTGGTTTATCAGCTTCAGT+AGG | - | chr2.4:12453076-12453095 | None:intergenic | 35.0% |
| ! | TATGTTAGGTCTTTTCCTAG+AGG | + | chr2.4:12453208-12453227 | MS.gene034324:CDS | 35.0% |
| ! | TTTTCAACTCTCGAAAACAG+TGG | + | chr2.4:12455347-12455366 | MS.gene034324:intron | 35.0% |
| !! | ATGAATGTGGTTCTAAATGG+AGG | + | chr2.4:12455880-12455899 | MS.gene034324:CDS | 35.0% |
| !! | CTAGAGAGAGTTATTTTGTG+AGG | + | chr2.4:12453768-12453787 | MS.gene034324:CDS | 35.0% |
| !! | GATTTGCTATACTTCCAGAT+GGG | + | chr2.4:12455935-12455954 | MS.gene034324:CDS | 35.0% |
| !! | GCAATGAATGTGGTTCTAAA+TGG | + | chr2.4:12455877-12455896 | MS.gene034324:CDS | 35.0% |
| !! | TAAGTGCTGCAACTTCTTTT+TGG | + | chr2.4:12454556-12454575 | MS.gene034324:CDS | 35.0% |
| !! | TAGCAATATGTGCCATTTCT+TGG | - | chr2.4:12455399-12455418 | None:intergenic | 35.0% |
| !! | TCAAGAATTTGGTAGCCTTT+TGG | - | chr2.4:12455231-12455250 | None:intergenic | 35.0% |
| !! | TGAATGTGGTTCTAAATGGA+GGG | + | chr2.4:12455881-12455900 | MS.gene034324:CDS | 35.0% |
| !! | TGCGATATTAATTTTGGTCG+AGG | - | chr2.4:12452650-12452669 | None:intergenic | 35.0% |
| AATGCCAAATGGCTACTCAA+AGG | + | chr2.4:12453907-12453926 | MS.gene034324:CDS | 40.0% | |
| ACAGCATCAGATCCAAGAAA+TGG | + | chr2.4:12451835-12451854 | MS.gene034324:CDS | 40.0% | |
| ACATACTCTTTCTCCCATCT+TGG | - | chr2.4:12454380-12454399 | None:intergenic | 40.0% | |
| ACTCATTGGAATGGCACAAA+TGG | + | chr2.4:12453129-12453148 | MS.gene034324:CDS | 40.0% | |
| AGGATTAAGGCTTCTTTGTC+TGG | + | chr2.4:12456117-12456136 | MS.gene034324:CDS | 40.0% | |
| AGGTTCCATACTCAATGAAG+AGG | + | chr2.4:12453183-12453202 | MS.gene034324:CDS | 40.0% | |
| ATCAAACGACATTTCTCCGA+TGG | - | chr2.4:12452351-12452370 | None:intergenic | 40.0% | |
| ATGCTCAACCCATATAACCT+AGG | - | chr2.4:12454047-12454066 | None:intergenic | 40.0% | |
| CATCCATGAGAATCTCAACA+AGG | - | chr2.4:12453309-12453328 | None:intergenic | 40.0% | |
| CATGTTGAAGTGGATGATAG+AGG | + | chr2.4:12454064-12454083 | MS.gene034324:CDS | 40.0% | |
| CGTTTGATGAACATCACTTG+AGG | + | chr2.4:12452363-12452382 | MS.gene034324:CDS | 40.0% | |
| CTACAATGGTGCATTACAAG+TGG | + | chr2.4:12453567-12453586 | MS.gene034324:CDS | 40.0% | |
| CTCATTGGAATGGCACAAAT+GGG | + | chr2.4:12453130-12453149 | MS.gene034324:CDS | 40.0% | |
| CTTCTTACGCTTCCATTTCT+TGG | - | chr2.4:12451850-12451869 | None:intergenic | 40.0% | |
| GGCAAAACTTTCTCTTGGTT+CGG | + | chr2.4:12456056-12456075 | MS.gene034324:CDS | 40.0% | |
| GTCTTTCACATTGTCGATCT+AGG | - | chr2.4:12454159-12454178 | None:intergenic | 40.0% | |
| TAACGTTTCTTCTTAGCACG+AGG | - | chr2.4:12451803-12451822 | None:intergenic | 40.0% | |
| TATGGAGGAACTCATTGGAA+TGG | + | chr2.4:12453120-12453139 | MS.gene034324:CDS | 40.0% | |
| TATGTAGCACTTCTTCCATC+TGG | + | chr2.4:12455913-12455932 | MS.gene034324:CDS | 40.0% | |
| TGCTCAACCCATATAACCTA+GGG | - | chr2.4:12454046-12454065 | None:intergenic | 40.0% | |
| TGTCCAGCTTCCATTAGATT+TGG | - | chr2.4:12451623-12451642 | None:intergenic | 40.0% | |
| TGTTGAGATTCTCATGGATG+TGG | + | chr2.4:12453309-12453328 | MS.gene034324:CDS | 40.0% | |
| TTCGACAGTGCTACAAAATC+TGG | + | chr2.4:12451731-12451750 | MS.gene034324:CDS | 40.0% | |
| ! | AGGTCTTTTCCTAGAGGAAT+TGG | + | chr2.4:12453214-12453233 | MS.gene034324:CDS | 40.0% |
| ! | GGAAGTATAGCAAATCCAGA+TGG | - | chr2.4:12455931-12455950 | None:intergenic | 40.0% |
| ! | TGTATACCTCTTCTCTAAGG+CGG | - | chr2.4:12452400-12452419 | None:intergenic | 40.0% |
| !! | AAAACTCTTTTTGGTGGCAC+TGG | - | chr2.4:12454585-12454604 | None:intergenic | 40.0% |
| !! | ATGCATTTGGTGCAAAACGT+TGG | + | chr2.4:12454125-12454144 | MS.gene034324:CDS | 40.0% |
| !! | ATTGGTTGATTCGGTTCCAA+CGG | + | chr2.4:12456035-12456054 | MS.gene034324:CDS | 40.0% |
| !! | CACTTAAAACCAGCTGGTTT+TGG | - | chr2.4:12453241-12453260 | None:intergenic | 40.0% |
| !! | GAATGTGGTTCTAAATGGAG+GGG | + | chr2.4:12455882-12455901 | MS.gene034324:CDS | 40.0% |
| !! | GGAAGAAGTGCTACATAATC+TGG | - | chr2.4:12455910-12455929 | None:intergenic | 40.0% |
| !! | GGATTTGCTATACTTCCAGA+TGG | + | chr2.4:12455934-12455953 | MS.gene034324:CDS | 40.0% |
| !! | GTTAGTTCTGGACATGCATT+TGG | + | chr2.4:12454112-12454131 | MS.gene034324:CDS | 40.0% |
| !! | TACAAGCAGCTTGTTAGTTC+TGG | + | chr2.4:12454100-12454119 | MS.gene034324:CDS | 40.0% |
| !!! | TTTTGGTTTGCAGACTCAAC+AGG | + | chr2.4:12452211-12452230 | MS.gene034324:intron | 40.0% |
| AAATTCCCGCCTTAGAGAAG+AGG | + | chr2.4:12452391-12452410 | MS.gene034324:CDS | 45.0% | |
| AACATTCCCACAGTCGATGT+TGG | + | chr2.4:12454199-12454218 | MS.gene034324:CDS | 45.0% | |
| AAGGAACTGAGCAGAGAGTT+AGG | + | chr2.4:12452053-12452072 | MS.gene034324:CDS | 45.0% | |
| AGAAGTGAGGTAAGCAAGCA+AGG | + | chr2.4:12454630-12454649 | MS.gene034324:intron | 45.0% | |
| AGCAACATGCTGATGGAACT+TGG | + | chr2.4:12453798-12453817 | MS.gene034324:CDS | 45.0% | |
| AGGAACTGAGCAGAGAGTTA+GGG | + | chr2.4:12452054-12452073 | MS.gene034324:CDS | 45.0% | |
| ATGGAACCTCCTTCAAGTGT+AGG | - | chr2.4:12453172-12453191 | None:intergenic | 45.0% | |
| ATGTGCATAAGCTTCTGTGC+TGG | + | chr2.4:12454417-12454436 | MS.gene034324:CDS | 45.0% | |
| CACAAATGGGTGATCCACTT+TGG | + | chr2.4:12453143-12453162 | MS.gene034324:CDS | 45.0% | |
| CAGAGAAAACTGTGGACCAT+TGG | - | chr2.4:12453492-12453511 | None:intergenic | 45.0% | |
| CAGTGGGATATCCTTTCCAA+TGG | + | chr2.4:12455364-12455383 | MS.gene034324:intron | 45.0% | |
| CCAACGGCAAAACTTTCTCT+TGG | + | chr2.4:12456051-12456070 | MS.gene034324:CDS | 45.0% | |
| CCTTCCTTTGCTTGTCATCA+GGG | - | chr2.4:12452037-12452056 | None:intergenic | 45.0% | |
| CTGGGTCATCTACACTCTTA+CGG | - | chr2.4:12454515-12454534 | None:intergenic | 45.0% | |
| CTTTGGTTGCCTACACTTGA+AGG | + | chr2.4:12453160-12453179 | MS.gene034324:CDS | 45.0% | |
| GACAATGCCAGAGAAAACTG+TGG | - | chr2.4:12453500-12453519 | None:intergenic | 45.0% | |
| GAGAGTTGTACGGATTCAAC+AGG | + | chr2.4:12455820-12455839 | MS.gene034324:CDS | 45.0% | |
| GCAACATGCTGATGGAACTT+GGG | + | chr2.4:12453799-12453818 | MS.gene034324:CDS | 45.0% | |
| GCTCAACCCATATAACCTAG+GGG | - | chr2.4:12454045-12454064 | None:intergenic | 45.0% | |
| GCTTCACACTTAAAACCAGC+TGG | - | chr2.4:12453247-12453266 | None:intergenic | 45.0% | |
| GCTTCTTGTCCTAATTGTGG+TGG | + | chr2.4:12452317-12452336 | MS.gene034324:CDS | 45.0% | |
| GGAATGGGAGGAGATATGTA+TGG | + | chr2.4:12453019-12453038 | MS.gene034324:CDS | 45.0% | |
| GGATCTGATGCTGTGTATGA+CGG | - | chr2.4:12451829-12451848 | None:intergenic | 45.0% | |
| TACATATCTCCTCCCATTCC+TGG | - | chr2.4:12453019-12453038 | None:intergenic | 45.0% | |
| TCAAGTGTAGGCAACCAAAG+TGG | - | chr2.4:12453160-12453179 | None:intergenic | 45.0% | |
| TCCTTCCTTTGCTTGTCATC+AGG | - | chr2.4:12452038-12452057 | None:intergenic | 45.0% | |
| TGGGATATCCTTTCCAATGG+TGG | + | chr2.4:12455367-12455386 | MS.gene034324:CDS | 45.0% | |
| TGGGTCATCTACACTCTTAC+GGG | - | chr2.4:12454514-12454533 | None:intergenic | 45.0% | |
| TGGTGGAGTTGTCCAAGAAA+TGG | + | chr2.4:12455384-12455403 | MS.gene034324:CDS | 45.0% | |
| TGTCTCAAGAGCAATGACAC+TGG | + | chr2.4:12453516-12453535 | MS.gene034324:CDS | 45.0% | |
| TTCTTGGACAACTCCACCAT+TGG | - | chr2.4:12455383-12455402 | None:intergenic | 45.0% | |
| ! | AACTTCGTGCCGATAACATG+AGG | + | chr2.4:12452273-12452292 | MS.gene034324:CDS | 45.0% |
| ! | ATGGGTTGAGCATGTTGAAG+TGG | + | chr2.4:12454054-12454073 | MS.gene034324:CDS | 45.0% |
| ! | CAATGGTCCACAGTTTTCTC+TGG | + | chr2.4:12453490-12453509 | MS.gene034324:CDS | 45.0% |
| ! | CACAGGAGCTGATGATGTAA+GGG | + | chr2.4:12454482-12454501 | MS.gene034324:CDS | 45.0% |
| ! | CCAAGAGAAAGTTTTGCCGT+TGG | - | chr2.4:12456054-12456073 | None:intergenic | 45.0% |
| ! | TGTGGGAATGTTTGTTGCCA+TGG | - | chr2.4:12454191-12454210 | None:intergenic | 45.0% |
| !! | ACACTGGAAGTGCTATCAAC+TGG | + | chr2.4:12453532-12453551 | MS.gene034324:CDS | 45.0% |
| !! | ACTGGAAGTGCTATCAACTG+GGG | + | chr2.4:12453534-12453553 | MS.gene034324:CDS | 45.0% |
| !! | CACTGGAAGTGCTATCAACT+GGG | + | chr2.4:12453533-12453552 | MS.gene034324:CDS | 45.0% |
| !! | GGCAGTAGTGGATGTTTCTT+TGG | + | chr2.4:12453820-12453839 | MS.gene034324:CDS | 45.0% |
| !! | GTATACCTCTTCTCTAAGGC+GGG | - | chr2.4:12452399-12452418 | None:intergenic | 45.0% |
| !! | TGAAAGACTTGCTAGTGCCA+TGG | + | chr2.4:12454171-12454190 | MS.gene034324:CDS | 45.0% |
| !! | TTCTCTTGGTTCGGTTGCTA+CGG | + | chr2.4:12456065-12456084 | MS.gene034324:CDS | 45.0% |
| !!! | GGTTTTGGACCAATTCCTCT+AGG | - | chr2.4:12453226-12453245 | None:intergenic | 45.0% |
| !! | AAAAGTAAATAAATAAAAAA+TGG | - | chr2.4:12451897-12451916 | None:intergenic | 5.0% |
| !! | ATTAAATATATTAGTAAATA+TGG | - | chr2.4:12455482-12455501 | None:intergenic | 5.0% |
| ACAACCACACCAAATGGAGG+AGG | + | chr2.4:12455958-12455977 | MS.gene034324:CDS | 50.0% | |
| AGAAGGCCTTCTTCTGGATC+TGG | - | chr2.4:12453870-12453889 | None:intergenic | 50.0% | |
| AGATCCAGAAGAAGGCCTTC+TGG | + | chr2.4:12453869-12453888 | MS.gene034324:CDS | 50.0% | |
| AGGCTTCGATCCCCTACATT+AGG | - | chr2.4:12452567-12452586 | None:intergenic | 50.0% | |
| ATTCCCACAGTCGATGTTGG+CGG | + | chr2.4:12454202-12454221 | MS.gene034324:CDS | 50.0% | |
| CAAGTACGTAGGAAAGCCAG+TGG | + | chr2.4:12452916-12452935 | MS.gene034324:CDS | 50.0% | |
| CACACCCTGATGACAAGCAA+AGG | + | chr2.4:12452030-12452049 | MS.gene034324:CDS | 50.0% | |
| CACACGTGGACAACACTTTC+AGG | + | chr2.4:12454459-12454478 | MS.gene034324:CDS | 50.0% | |
| CCCTGATGACAAGCAAAGGA+AGG | + | chr2.4:12452034-12452053 | MS.gene034324:CDS | 50.0% | |
| CTAGTTGGCACAAGTGGTGA+AGG | - | chr2.4:12453752-12453771 | None:intergenic | 50.0% | |
| CTCTCTCTAGTTGGCACAAG+TGG | - | chr2.4:12453758-12453777 | None:intergenic | 50.0% | |
| CTTCTGCCAGATCCAGAAGA+AGG | + | chr2.4:12453861-12453880 | MS.gene034324:CDS | 50.0% | |
| CTTCTTCTGGATCTGGCAGA+AGG | - | chr2.4:12453863-12453882 | None:intergenic | 50.0% | |
| CTTTGCTTGTCATCAGGGTG+TGG | - | chr2.4:12452032-12452051 | None:intergenic | 50.0% | |
| GACATTTCTCCGATGGCAGT+TGG | - | chr2.4:12452344-12452363 | None:intergenic | 50.0% | |
| GATCCCCTACAACAGTTGCA+CGG | + | chr2.4:12452532-12452551 | MS.gene034324:intron | 50.0% | |
| GATGGGACAACCACACCAAA+TGG | + | chr2.4:12455952-12455971 | MS.gene034324:CDS | 50.0% | |
| GCACTTAGAACAATGCCAGC+TGG | - | chr2.4:12454543-12454562 | None:intergenic | 50.0% | |
| GCAGTTGGTCCACCACAATT+AGG | - | chr2.4:12452329-12452348 | None:intergenic | 50.0% | |
| GCTGCTATGGAGGAACTCAT+TGG | + | chr2.4:12453115-12453134 | MS.gene034324:CDS | 50.0% | |
| GGAATTGGTCCAAAACCAGC+TGG | + | chr2.4:12453229-12453248 | MS.gene034324:CDS | 50.0% | |
| GGACAACTCCACCATTGGAA+AGG | - | chr2.4:12455378-12455397 | None:intergenic | 50.0% | |
| GGAGGAGATATGTATGGAGC+TGG | + | chr2.4:12453025-12453044 | MS.gene034324:CDS | 50.0% | |
| GGCTTCGATCCCCTACATTA+GGG | - | chr2.4:12452566-12452585 | None:intergenic | 50.0% | |
| GTTTGCAGACTCAACAGGAG+AGG | + | chr2.4:12452216-12452235 | MS.gene034324:intron | 50.0% | |
| TCACCAACACCTCCTCCATT+TGG | - | chr2.4:12455970-12455989 | None:intergenic | 50.0% | |
| TCCACTACTCTCCCCTTCAT+CGG | + | chr2.4:12452946-12452965 | MS.gene034324:CDS | 50.0% | |
| TCCTACGTACTTGGCAGCAA+TGG | - | chr2.4:12452909-12452928 | None:intergenic | 50.0% | |
| TGAGCTAGCAGTTGCTGCTA+TGG | + | chr2.4:12453102-12453121 | MS.gene034324:CDS | 50.0% | |
| TGATGGAACTTGGGCAGTAG+TGG | + | chr2.4:12453808-12453827 | MS.gene034324:CDS | 50.0% | |
| TGCACCGTGCAACTGTTGTA+GGG | - | chr2.4:12452539-12452558 | None:intergenic | 50.0% | |
| TGGACAACACTTTCAGGCAC+AGG | + | chr2.4:12454465-12454484 | MS.gene034324:CDS | 50.0% | |
| TGGATCTGGCAGAAGGACTA+GGG | - | chr2.4:12453856-12453875 | None:intergenic | 50.0% | |
| TGGTTGCCTACACTTGAAGG+AGG | + | chr2.4:12453163-12453182 | MS.gene034324:CDS | 50.0% | |
| TTCGGAGGACAACCAGGAAT+GGG | + | chr2.4:12453004-12453023 | MS.gene034324:CDS | 50.0% | |
| TTTCGGAGGACAACCAGGAA+TGG | + | chr2.4:12453003-12453022 | MS.gene034324:CDS | 50.0% | |
| ! | AACACCTCCTCCATTTGGTG+TGG | - | chr2.4:12455965-12455984 | None:intergenic | 50.0% |
| ! | ACACCAAATGGAGGAGGTGT+TGG | + | chr2.4:12455964-12455983 | MS.gene034324:CDS | 50.0% |
| ! | CGTAAGAGTGTAGATGACCC+AGG | + | chr2.4:12454513-12454532 | MS.gene034324:CDS | 50.0% |
| ! | GCACAGGAGCTGATGATGTA+AGG | + | chr2.4:12454481-12454500 | MS.gene034324:CDS | 50.0% |
| ! | TTTGGTGTGGTTGTCCCATC+TGG | - | chr2.4:12455952-12455971 | None:intergenic | 50.0% |
| !! | AGTAGTGGATAGCTCACCAC+TGG | - | chr2.4:12452935-12452954 | None:intergenic | 50.0% |
| !! | CACCAATGCCGAGTTCTAGA+GGG | - | chr2.4:12452982-12453001 | None:intergenic | 50.0% |
| !! | CACTGGCTTTCCTACGTACT+TGG | - | chr2.4:12452918-12452937 | None:intergenic | 50.0% |
| !! | GAACTCGGCATTGGTGGTTT+CGG | + | chr2.4:12452986-12453005 | MS.gene034324:CDS | 50.0% |
| !! | GGTGTTGGTGAAACTGGACA+CGG | + | chr2.4:12455979-12455998 | MS.gene034324:CDS | 50.0% |
| ACCGATGAAGGGGAGAGTAG+TGG | - | chr2.4:12452950-12452969 | None:intergenic | 55.0% | |
| CTGCACCGTGCAACTGTTGT+AGG | - | chr2.4:12452540-12452559 | None:intergenic | 55.0% | |
| CTGGATCTGGCAGAAGGACT+AGG | - | chr2.4:12453857-12453876 | None:intergenic | 55.0% | |
| GCAACCAGAAGGCCTTCTTC+TGG | - | chr2.4:12453876-12453895 | None:intergenic | 55.0% | |
| GCACCGTGCAACTGTTGTAG+GGG | - | chr2.4:12452538-12452557 | None:intergenic | 55.0% | |
| GCCATTGCTGCCAAGTACGT+AGG | + | chr2.4:12452905-12452924 | MS.gene034324:CDS | 55.0% | |
| GCTAGCAGTTGCTGCTATGG+AGG | + | chr2.4:12453105-12453124 | MS.gene034324:CDS | 55.0% | |
| GGGACAACCACACCAAATGG+AGG | + | chr2.4:12455955-12455974 | MS.gene034324:CDS | 55.0% | |
| GGTGCAGCGACCCTAATGTA+GGG | + | chr2.4:12452553-12452572 | MS.gene034324:intron | 55.0% | |
| GTGCAGCGACCCTAATGTAG+GGG | + | chr2.4:12452554-12452573 | MS.gene034324:intron | 55.0% | |
| TGCTATCAACTGGGGTGGCA+GGG | + | chr2.4:12453542-12453561 | MS.gene034324:CDS | 55.0% | |
| ! | CCACCAATGCCGAGTTCTAG+AGG | - | chr2.4:12452983-12453002 | None:intergenic | 55.0% |
| ! | GTACCGCCAACATCGACTGT+GGG | - | chr2.4:12454208-12454227 | None:intergenic | 55.0% |
| ! | GTTGGTGAAACTGGACACGG+TGG | + | chr2.4:12455982-12456001 | MS.gene034324:CDS | 55.0% |
| ! | TGTCCACGTGTGTGCTGTTG+AGG | - | chr2.4:12454451-12454470 | None:intergenic | 55.0% |
| !! | ACAATGCCAGCTGGTCTTCC+TGG | - | chr2.4:12454534-12454553 | None:intergenic | 55.0% |
| !! | CAATGCCAGCTGGTCTTCCT+GGG | - | chr2.4:12454533-12454552 | None:intergenic | 55.0% |
| !! | CCTCTAGAACTCGGCATTGG+TGG | + | chr2.4:12452980-12452999 | MS.gene034324:CDS | 55.0% |
| !! | GGAAGTGCTATCAACTGGGG+TGG | + | chr2.4:12453537-12453556 | MS.gene034324:CDS | 55.0% |
| !! | GGAGGAGGTGTTGGTGAAAC+TGG | + | chr2.4:12455973-12455992 | MS.gene034324:CDS | 55.0% |
| !! | TGTGGTGGACCAACTGCCAT+CGG | + | chr2.4:12452332-12452351 | MS.gene034324:CDS | 55.0% |
| CGGTGCAGCGACCCTAATGT+AGG | + | chr2.4:12452552-12452571 | MS.gene034324:intron | 60.0% | |
| GATGACCCAGGAAGACCAGC+TGG | + | chr2.4:12454525-12454544 | MS.gene034324:CDS | 60.0% | |
| GCGAGGAGGAACCGATGAAG+GGG | - | chr2.4:12452960-12452979 | None:intergenic | 60.0% | |
| GGAGGACAACCAGGAATGGG+AGG | + | chr2.4:12453007-12453026 | MS.gene034324:CDS | 60.0% | |
| GGCGAGGAGGAACCGATGAA+GGG | - | chr2.4:12452961-12452980 | None:intergenic | 60.0% | |
| GGGGTGGCAGGGAACTACAA+TGG | + | chr2.4:12453553-12453572 | MS.gene034324:CDS | 60.0% | |
| GGTGAAACTGGACACGGTGG+TGG | + | chr2.4:12455985-12456004 | MS.gene034324:CDS | 60.0% | |
| GGTGGTTTCGGAGGACAACC+AGG | + | chr2.4:12452998-12453017 | MS.gene034324:CDS | 60.0% | |
| GTGCCTCAACAGCACACACG+TGG | + | chr2.4:12454445-12454464 | MS.gene034324:CDS | 60.0% | |
| GTGCTATCAACTGGGGTGGC+AGG | + | chr2.4:12453541-12453560 | MS.gene034324:CDS | 60.0% | |
| ! | GGTACCGCCAACATCGACTG+TGG | - | chr2.4:12454209-12454228 | None:intergenic | 60.0% |
| !! | ATGCCGAGTTCTAGAGGGCG+AGG | - | chr2.4:12452977-12452996 | None:intergenic | 60.0% |
| !! | CCTCCTCGCCCTCTAGAACT+CGG | + | chr2.4:12452971-12452990 | MS.gene034324:CDS | 60.0% |
| !! | CGCCCTCTAGAACTCGGCAT+TGG | + | chr2.4:12452977-12452996 | MS.gene034324:CDS | 60.0% |
| !! | CTCGGCATTGGTGGTTTCGG+AGG | + | chr2.4:12452989-12453008 | MS.gene034324:CDS | 60.0% |
| GGGCGAGGAGGAACCGATGA+AGG | - | chr2.4:12452962-12452981 | None:intergenic | 65.0% | |
| !! | CCGAGTTCTAGAGGGCGAGG+AGG | - | chr2.4:12452974-12452993 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 12451620 | 12456152 | 12451620 | ID=MS.gene034324 |
| chr2.4 | mRNA | 12451620 | 12456152 | 12451620 | ID=MS.gene034324.t1;Parent=MS.gene034324 |
| chr2.4 | exon | 12451620 | 12451861 | 12451620 | ID=MS.gene034324.t1.exon1;Parent=MS.gene034324.t1 |
| chr2.4 | CDS | 12451620 | 12451861 | 12451620 | ID=cds.MS.gene034324.t1;Parent=MS.gene034324.t1 |
| chr2.4 | exon | 12452013 | 12452130 | 12452013 | ID=MS.gene034324.t1.exon2;Parent=MS.gene034324.t1 |
| chr2.4 | CDS | 12452013 | 12452130 | 12452013 | ID=cds.MS.gene034324.t1;Parent=MS.gene034324.t1 |
| chr2.4 | exon | 12452224 | 12452412 | 12452224 | ID=MS.gene034324.t1.exon3;Parent=MS.gene034324.t1 |
| chr2.4 | CDS | 12452224 | 12452412 | 12452224 | ID=cds.MS.gene034324.t1;Parent=MS.gene034324.t1 |
| chr2.4 | exon | 12452890 | 12453330 | 12452890 | ID=MS.gene034324.t1.exon4;Parent=MS.gene034324.t1 |
| chr2.4 | CDS | 12452890 | 12453330 | 12452890 | ID=cds.MS.gene034324.t1;Parent=MS.gene034324.t1 |
| chr2.4 | exon | 12453487 | 12453588 | 12453487 | ID=MS.gene034324.t1.exon5;Parent=MS.gene034324.t1 |
| chr2.4 | CDS | 12453487 | 12453588 | 12453487 | ID=cds.MS.gene034324.t1;Parent=MS.gene034324.t1 |
| chr2.4 | exon | 12453728 | 12453928 | 12453728 | ID=MS.gene034324.t1.exon6;Parent=MS.gene034324.t1 |
| chr2.4 | CDS | 12453728 | 12453928 | 12453728 | ID=cds.MS.gene034324.t1;Parent=MS.gene034324.t1 |
| chr2.4 | exon | 12454049 | 12454223 | 12454049 | ID=MS.gene034324.t1.exon7;Parent=MS.gene034324.t1 |
| chr2.4 | CDS | 12454049 | 12454223 | 12454049 | ID=cds.MS.gene034324.t1;Parent=MS.gene034324.t1 |
| chr2.4 | exon | 12454367 | 12454638 | 12454367 | ID=MS.gene034324.t1.exon8;Parent=MS.gene034324.t1 |
| chr2.4 | CDS | 12454367 | 12454638 | 12454367 | ID=cds.MS.gene034324.t1;Parent=MS.gene034324.t1 |
| chr2.4 | exon | 12455367 | 12455462 | 12455367 | ID=MS.gene034324.t1.exon9;Parent=MS.gene034324.t1 |
| chr2.4 | CDS | 12455367 | 12455462 | 12455367 | ID=cds.MS.gene034324.t1;Parent=MS.gene034324.t1 |
| chr2.4 | exon | 12455781 | 12456152 | 12455781 | ID=MS.gene034324.t1.exon10;Parent=MS.gene034324.t1 |
| chr2.4 | CDS | 12455781 | 12456152 | 12455781 | ID=cds.MS.gene034324.t1;Parent=MS.gene034324.t1 |
| Gene Sequence |
| Protein sequence |