AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene034348

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene034348.t1 MTR_2g088000 96.018 452 17 1 1 452 152 602 0.0 894
MS.gene034348.t1 MTR_4g132430 54.217 415 147 14 1 408 95 473 2.39e-115 347
MS.gene034348.t1 MTR_2g023930 50.688 436 161 14 1 409 125 533 1.04e-110 337
MS.gene034348.t1 MTR_4g049760 46.352 466 205 10 1 444 89 531 7.06e-109 333
MS.gene034348.t1 MTR_4g132430 54.933 375 128 10 39 408 1 339 1.78e-108 325
MS.gene034348.t1 MTR_4g047580 43.816 477 212 11 1 440 81 538 1.12e-107 329
MS.gene034348.t1 MTR_4g049790 44.931 434 192 12 1 413 113 520 4.86e-105 323
MS.gene034348.t1 MTR_3g053330 43.970 398 167 11 18 405 93 444 6.01e-93 289
MS.gene034348.t1 MTR_7g110720 38.824 425 155 13 15 431 93 420 3.36e-74 239
MS.gene034348.t1 MTR_7g110720 51.938 258 80 9 182 431 172 393 8.08e-70 227
MS.gene034348.t1 MTR_2g045360 35.236 403 187 13 16 404 66 408 2.18e-54 187
MS.gene034348.t1 MTR_7g009730 31.120 482 231 18 23 430 45 499 1.57e-47 172
MS.gene034348.t1 MTR_4g094412 42.748 262 124 7 183 419 227 487 1.22e-43 160
MS.gene034348.t1 MTR_4g094412 42.748 262 124 7 183 419 218 478 1.84e-43 159
MS.gene034348.t1 MTR_4g107970 35.917 387 180 12 8 343 60 429 1.49e-40 153
MS.gene034348.t1 MTR_4g107970 37.158 366 162 12 29 343 4 352 9.50e-40 150
MS.gene034348.t1 MTR_5g044695 84.615 65 7 1 165 229 46 107 1.45e-31 117
MS.gene034348.t1 MTR_6g038890 47.799 159 51 6 71 229 92 218 1.74e-31 120
MS.gene034348.t1 MTR_4g007060 30.702 228 101 7 176 402 105 276 1.78e-26 108
MS.gene034348.t1 MTR_4g007060 31.140 228 100 8 176 402 139 310 1.92e-26 109
MS.gene034348.t1 MTR_3g056100 38.122 181 83 5 109 261 297 476 2.80e-25 109
MS.gene034348.t1 MTR_3g056100 38.122 181 83 5 109 261 153 332 2.89e-25 108
MS.gene034348.t1 MTR_5g094430 44.628 121 56 3 151 261 172 291 3.23e-25 107
MS.gene034348.t1 MTR_5g094430 44.628 121 56 3 151 261 194 313 3.50e-25 107
MS.gene034348.t1 MTR_3g056100 39.535 172 80 5 109 261 297 463 7.39e-25 107
MS.gene034348.t1 MTR_3g056100 39.535 172 80 5 109 261 153 319 7.86e-25 106
MS.gene034348.t1 MTR_5g094430 44.628 121 56 3 151 261 306 425 1.05e-24 107
MS.gene034348.t1 MTR_3g031220 54.430 79 35 1 181 259 347 424 2.56e-24 105
MS.gene034348.t1 MTR_3g031220 47.619 63 31 2 199 261 198 258 4.52e-11 65.1
MS.gene034348.t1 MTR_3g009470 37.423 163 77 3 103 261 415 556 3.00e-24 106
MS.gene034348.t1 MTR_3g009470 42.683 82 44 3 200 280 281 360 1.05e-12 70.5
MS.gene034348.t1 MTR_1g013790 39.516 124 62 3 139 259 48 161 5.06e-24 100
MS.gene034348.t1 MTR_1g013760 48.889 90 46 0 184 273 125 214 1.10e-23 100
MS.gene034348.t1 MTR_7g011820 48.454 97 49 1 175 271 386 481 1.25e-23 103
MS.gene034348.t1 MTR_7g011820 52.459 61 27 2 199 259 228 286 7.45e-13 70.9
MS.gene034348.t1 MTR_5g097490 51.724 87 41 1 173 259 226 311 1.30e-23 102
MS.gene034348.t1 MTR_3g106060 52.632 76 36 0 182 257 121 196 2.01e-23 100
MS.gene034348.t1 MTR_5g074400 52.381 84 39 1 178 261 399 481 3.53e-23 102
MS.gene034348.t1 MTR_5g074400 35.714 112 60 4 148 259 202 301 2.03e-11 66.2
MS.gene034348.t1 MTR_4g122530 51.948 77 36 1 183 259 192 267 5.39e-23 100
MS.gene034348.t1 MTR_4g013260 53.165 79 36 1 181 259 318 395 5.46e-23 101
MS.gene034348.t1 MTR_4g013260 40.000 75 42 2 185 259 172 243 1.36e-11 66.6
MS.gene034348.t1 MTR_7g071120 40.000 200 84 8 178 370 303 473 5.73e-23 101
MS.gene034348.t1 MTR_7g109800 46.739 92 42 2 183 274 129 213 1.90e-22 97.4
MS.gene034348.t1 MTR_5g042920 50.617 81 39 1 181 261 302 381 3.28e-22 99.0
MS.gene034348.t1 MTR_5g042920 49.180 61 29 2 199 259 151 209 5.16e-12 67.8
MS.gene034348.t1 MTR_5g043880 47.126 87 45 1 170 256 95 180 7.99e-22 95.5
MS.gene034348.t1 MTR_7g080020 51.250 80 38 1 182 261 476 554 1.26e-21 98.6
MS.gene034348.t1 MTR_7g080020 50.000 60 28 2 200 259 281 338 3.12e-11 66.2
MS.gene034348.t1 MTR_3g104750 46.914 81 42 1 176 256 81 160 1.49e-21 91.7
MS.gene034348.t1 MTR_7g080000 51.250 80 38 1 182 261 415 493 1.60e-21 98.2
MS.gene034348.t1 MTR_7g080000 47.692 65 32 2 195 259 230 292 2.27e-11 66.6
MS.gene034348.t1 MTR_2g033820 49.351 77 38 1 183 259 187 262 1.62e-21 96.3
MS.gene034348.t1 MTR_4g082580 49.383 81 40 1 181 261 260 339 1.81e-21 96.3
MS.gene034348.t1 MTR_4g082580 41.463 82 43 3 199 279 145 222 1.81e-11 65.9
MS.gene034348.t1 MTR_1g015140 50.685 73 35 1 184 256 87 158 4.32e-21 90.1
MS.gene034348.t1 MTR_1g086790 40.000 115 65 2 183 294 142 255 1.28e-20 92.8
MS.gene034348.t1 MTR_7g028415 50.704 71 34 1 188 258 82 151 1.55e-20 89.0
MS.gene034348.t1 MTR_7g028710 50.704 71 34 1 188 258 82 151 1.55e-20 89.0
MS.gene034348.t1 MTR_2g105060 30.085 236 87 9 177 402 142 309 1.90e-20 92.0
MS.gene034348.t1 MTR_2g105060 30.085 236 87 9 177 402 67 234 1.92e-20 90.5
MS.gene034348.t1 MTR_4g094588 51.351 74 35 1 186 259 165 237 4.75e-20 91.3
MS.gene034348.t1 MTR_1g009613 47.561 82 43 0 183 264 246 327 7.18e-20 90.9
MS.gene034348.t1 MTR_3g095080 42.708 96 53 2 182 277 127 220 9.27e-20 88.2
MS.gene034348.t1 MTR_3g095080 46.067 89 46 2 182 270 151 237 1.09e-19 88.6
MS.gene034348.t1 MTR_4g130900 50.649 77 37 1 183 259 343 418 3.68e-19 90.1
MS.gene034348.t1 MTR_7g100510 43.529 85 47 1 175 259 337 420 3.77e-19 89.7
MS.gene034348.t1 MTR_7g100510 50.000 60 28 2 200 259 190 247 1.18e-11 66.6
MS.gene034348.t1 MTR_7g079010 46.250 80 42 1 177 256 119 197 4.56e-19 85.9
MS.gene034348.t1 MTR_8g092140 45.556 90 46 3 182 270 142 229 6.19e-19 85.9
MS.gene034348.t1 MTR_8g096730 40.659 91 53 1 172 262 43 132 9.63e-19 83.2
MS.gene034348.t1 MTR_8g087000 54.930 71 31 1 190 259 67 137 9.96e-19 85.9
MS.gene034348.t1 MTR_8g087000 54.930 71 31 1 190 259 66 136 1.17e-18 85.5
MS.gene034348.t1 MTR_5g091390 48.649 74 37 1 186 259 144 216 1.26e-18 86.7
MS.gene034348.t1 MTR_8g007270 47.368 76 39 1 182 257 137 211 1.86e-18 84.3
MS.gene034348.t1 MTR_4g094908 46.835 79 42 0 183 261 250 328 3.33e-18 85.9
MS.gene034348.t1 MTR_1g070455 47.436 78 41 0 183 260 277 354 3.67e-18 85.9
MS.gene034348.t1 MTR_8g092010 44.595 74 40 1 186 259 95 167 4.56e-18 82.4
MS.gene034348.t1 MTR_2g016770 54.839 62 28 0 199 260 35 96 5.54e-18 82.8
MS.gene034348.t1 MTR_5g016610 47.368 76 40 0 183 258 183 258 5.70e-18 84.0
MS.gene034348.t1 MTR_2g016770 54.839 62 28 0 199 260 27 88 8.17e-18 82.0
MS.gene034348.t1 MTR_2g083870 51.429 70 34 0 190 259 71 140 1.02e-17 83.2
MS.gene034348.t1 MTR_4g127040 48.000 75 39 0 183 257 229 303 1.09e-17 84.0
MS.gene034348.t1 MTR_7g109600 38.384 99 55 1 169 261 17 115 1.32e-17 82.8
MS.gene034348.t1 MTR_2g024350 35.714 140 80 2 194 323 3 142 4.48e-17 80.5
MS.gene034348.t1 MTR_3g095040 45.946 74 39 1 186 259 105 177 6.76e-17 79.3
MS.gene034348.t1 MTR_3g108960 45.946 74 40 0 183 256 298 371 3.06e-16 80.9
MS.gene034348.t1 MTR_7g062220 34.810 158 92 5 115 263 32 187 6.33e-16 79.0
MS.gene034348.t1 MTR_1g077780 44.304 79 43 1 183 261 46 123 7.82e-16 74.7
MS.gene034348.t1 MTR_2g024380 44.156 77 43 0 194 270 246 322 8.58e-16 79.7
MS.gene034348.t1 MTR_0117s0040 47.887 71 37 0 186 256 61 131 2.03e-15 76.3
MS.gene034348.t1 MTR_1g099600 40.426 94 54 1 196 289 182 273 2.68e-15 77.0
MS.gene034348.t1 MTR_2g032030 51.667 60 29 0 200 259 268 327 4.07e-15 77.8
MS.gene034348.t1 MTR_6g086555 36.774 155 79 6 123 259 113 266 4.34e-15 77.4
MS.gene034348.t1 MTR_8g028565 50.000 64 32 0 196 259 152 215 5.24e-15 76.3
MS.gene034348.t1 MTR_2g032030 50.820 61 30 0 199 259 267 327 6.68e-15 76.6
MS.gene034348.t1 MTR_7g079040 42.683 82 35 1 190 259 133 214 1.76e-14 74.7
MS.gene034348.t1 MTR_4g007060 44.262 61 34 0 176 236 139 199 5.29e-14 72.0
MS.gene034348.t1 MTR_3g090860 48.684 76 32 2 186 254 115 190 8.77e-14 72.8
MS.gene034348.t1 MTR_1g078260 42.466 73 40 2 186 257 234 305 1.03e-13 73.6
MS.gene034348.t1 MTR_3g009470 42.683 82 44 3 200 280 281 360 3.59e-13 71.6
MS.gene034348.t1 MTR_8g098945 45.161 62 34 0 198 259 128 189 8.57e-13 68.9
MS.gene034348.t1 MTR_7g073380 34.579 107 67 2 175 278 98 204 1.15e-12 68.9
MS.gene034348.t1 MTR_7g073430 36.449 107 65 2 175 278 97 203 2.09e-12 67.8
MS.gene034348.t1 MTR_8g027860 36.207 116 56 4 157 254 78 193 2.36e-12 68.6
MS.gene034348.t1 MTR_5g067680 53.448 58 25 1 200 255 203 260 2.99e-12 68.2
MS.gene034348.t1 MTR_2g075680 40.541 74 42 1 183 254 132 205 1.28e-11 65.9
MS.gene034348.t1 MTR_3g031220 47.619 63 31 2 199 261 198 258 2.07e-11 65.9
MS.gene034348.t1 MTR_5g097500 36.782 87 54 1 173 259 204 289 3.47e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene034348.t1 AT1G62300 48.753 441 179 9 1 421 139 552 3.50e-116 352
MS.gene034348.t1 AT4G04450 48.210 419 193 10 1 405 1 409 1.44e-103 315
MS.gene034348.t1 AT4G04450 48.210 419 193 10 1 405 95 503 4.20e-102 315
MS.gene034348.t1 AT4G22070 48.747 439 172 11 2 405 94 514 5.67e-93 291
MS.gene034348.t1 AT4G22070 48.747 439 172 11 2 405 94 514 5.67e-93 291
MS.gene034348.t1 AT4G22070 48.747 439 172 11 2 405 94 514 5.67e-93 291
MS.gene034348.t1 AT4G22070 48.747 439 172 11 2 405 94 514 5.67e-93 291
MS.gene034348.t1 AT4G01720 40.580 414 171 13 7 402 87 443 4.14e-68 225
MS.gene034348.t1 AT5G15130 32.809 445 230 16 18 407 35 465 5.57e-51 181
MS.gene034348.t1 AT5G15130 32.494 437 226 16 26 407 1 423 3.68e-49 175
MS.gene034348.t1 AT1G68150 38.849 278 113 9 22 292 97 324 1.21e-46 165
MS.gene034348.t1 AT1G18860 37.748 302 122 6 182 418 222 522 3.62e-43 159
MS.gene034348.t1 AT1G69810 33.739 329 187 9 18 334 25 334 2.57e-39 146
MS.gene034348.t1 AT1G69810 45.604 182 92 4 155 334 100 276 5.26e-38 141
MS.gene034348.t1 AT2G38470 44.628 121 65 2 181 301 344 462 3.87e-26 111
MS.gene034348.t1 AT2G38470 48.333 60 29 2 200 259 185 242 4.38e-11 65.5
MS.gene034348.t1 AT1G80840 30.603 232 98 7 176 402 118 291 1.17e-24 103
MS.gene034348.t1 AT4G26640 55.128 78 34 1 182 259 188 264 1.48e-24 105
MS.gene034348.t1 AT4G26640 55.128 78 34 1 182 259 188 264 1.48e-24 105
MS.gene034348.t1 AT4G26640 55.128 78 34 1 182 259 188 264 1.48e-24 105
MS.gene034348.t1 AT4G26640 55.128 78 34 1 182 259 188 264 1.48e-24 105
MS.gene034348.t1 AT4G26640 55.128 78 34 1 182 259 324 400 2.96e-24 105
MS.gene034348.t1 AT4G26640 55.128 78 34 1 182 259 292 368 3.14e-24 105
MS.gene034348.t1 AT4G26640 55.128 78 34 1 182 259 364 440 4.04e-24 105
MS.gene034348.t1 AT2G04880 47.674 86 44 1 178 263 262 346 1.67e-23 103
MS.gene034348.t1 AT2G04880 33.103 145 84 5 187 323 92 231 2.95e-11 65.9
MS.gene034348.t1 AT2G04880 47.674 86 44 1 178 263 286 370 2.41e-23 102
MS.gene034348.t1 AT2G04880 40.964 83 40 3 187 262 92 172 7.34e-11 64.7
MS.gene034348.t1 AT5G07100 41.880 117 61 3 147 259 87 200 3.13e-23 97.8
MS.gene034348.t1 AT5G07100 41.880 117 61 3 147 259 87 200 3.13e-23 97.8
MS.gene034348.t1 AT5G07100 41.880 117 61 3 147 259 87 200 3.13e-23 97.8
MS.gene034348.t1 AT5G07100 41.880 117 61 3 147 259 87 200 3.13e-23 97.8
MS.gene034348.t1 AT1G13960 53.165 79 36 1 181 259 391 468 4.79e-23 102
MS.gene034348.t1 AT1G13960 49.180 61 29 2 199 259 229 287 3.18e-12 68.9
MS.gene034348.t1 AT1G13960 53.165 79 36 1 181 259 238 315 5.58e-23 100
MS.gene034348.t1 AT1G13960 49.180 61 29 2 199 259 76 134 5.87e-12 67.4
MS.gene034348.t1 AT5G07100 40.625 128 66 4 136 259 172 293 5.97e-23 99.4
MS.gene034348.t1 AT1G29860 39.706 136 71 4 183 308 120 254 1.22e-22 97.8
MS.gene034348.t1 AT5G56270 53.750 80 36 1 182 261 470 548 1.32e-22 101
MS.gene034348.t1 AT5G56270 49.180 61 29 2 200 260 274 332 5.12e-11 65.5
MS.gene034348.t1 AT4G31800 58.462 65 27 0 198 262 110 174 2.05e-22 96.3
MS.gene034348.t1 AT2G25000 42.708 96 55 0 168 263 72 167 2.06e-22 95.9
MS.gene034348.t1 AT2G25000 42.708 96 55 0 168 263 72 167 2.06e-22 95.9
MS.gene034348.t1 AT2G25000 42.708 96 55 0 168 263 94 189 2.09e-22 96.3
MS.gene034348.t1 AT4G31800 58.462 65 27 0 198 262 175 239 2.35e-22 97.4
MS.gene034348.t1 AT5G49520 49.351 77 38 1 183 259 205 280 2.75e-22 99.0
MS.gene034348.t1 AT5G26170 50.685 73 35 1 185 257 99 170 3.22e-22 93.6
MS.gene034348.t1 AT2G25000 42.708 96 55 0 168 263 115 210 3.26e-22 96.3
MS.gene034348.t1 AT2G03340 48.276 87 44 1 175 261 391 476 6.72e-22 98.6
MS.gene034348.t1 AT2G03340 49.180 61 29 2 199 259 250 308 1.56e-12 69.7
MS.gene034348.t1 AT4G18170 51.948 77 36 1 183 259 156 231 3.16e-21 94.4
MS.gene034348.t1 AT1G69310 44.944 89 45 2 171 256 116 203 5.74e-21 93.2
MS.gene034348.t1 AT1G69310 44.944 89 45 2 171 256 116 203 5.74e-21 93.2
MS.gene034348.t1 AT1G69310 44.944 89 45 2 171 256 116 203 5.74e-21 93.2
MS.gene034348.t1 AT3G01080 46.512 86 45 1 174 259 319 403 6.55e-21 95.5
MS.gene034348.t1 AT3G01080 46.512 86 45 1 174 259 281 365 6.86e-21 95.1
MS.gene034348.t1 AT2G47260 50.649 77 37 1 183 259 158 233 1.18e-20 93.2
MS.gene034348.t1 AT2G30250 50.000 80 39 1 182 261 311 389 2.18e-20 93.2
MS.gene034348.t1 AT4G26440 50.633 79 38 1 183 261 356 433 2.34e-20 94.4
MS.gene034348.t1 AT4G26440 50.000 62 29 2 199 260 178 237 1.12e-12 70.5
MS.gene034348.t1 AT3G01970 51.351 74 35 1 185 258 51 123 2.71e-20 87.4
MS.gene034348.t1 AT5G41570 50.000 82 39 2 176 256 74 154 6.88e-20 87.4
MS.gene034348.t1 AT1G64000 41.748 103 55 2 174 276 89 186 7.43e-20 87.8
MS.gene034348.t1 AT5G46350 50.000 74 36 1 186 259 170 242 8.07e-20 90.5
MS.gene034348.t1 AT4G39410 47.368 76 39 1 182 257 206 280 2.85e-19 88.6
MS.gene034348.t1 AT5G13080 50.685 73 35 1 186 258 54 125 3.05e-19 84.3
MS.gene034348.t1 AT1G55600 43.820 89 49 1 173 261 281 368 3.51e-19 90.1
MS.gene034348.t1 AT4G30935 50.649 77 37 1 183 259 315 390 4.04e-19 90.1
MS.gene034348.t1 AT2G46130 48.718 78 39 1 179 256 10 86 6.57e-19 82.4
MS.gene034348.t1 AT2G23320 57.627 59 25 0 200 258 241 299 1.24e-18 87.0
MS.gene034348.t1 AT4G24240 50.000 76 38 0 183 258 265 340 1.61e-18 87.0
MS.gene034348.t1 AT3G62340 50.000 78 38 1 186 263 105 181 2.39e-18 85.5
MS.gene034348.t1 AT2G44745 46.667 75 39 1 182 256 128 201 3.25e-18 83.6
MS.gene034348.t1 AT2G24570 50.000 74 37 0 183 256 227 300 3.59e-18 85.5
MS.gene034348.t1 AT5G28650 49.383 81 35 2 183 257 240 320 3.85e-18 85.5
MS.gene034348.t1 AT2G30590 48.352 91 40 3 180 263 288 378 3.86e-18 86.3
MS.gene034348.t1 AT5G64810 47.887 71 36 1 186 256 97 166 7.97e-18 82.0
MS.gene034348.t1 AT4G31550 48.649 74 38 0 183 256 230 303 9.74e-18 84.3
MS.gene034348.t1 AT4G31550 48.649 74 38 0 183 256 229 302 9.99e-18 84.3
MS.gene034348.t1 AT1G29280 47.143 70 37 0 190 259 65 134 1.45e-17 82.8
MS.gene034348.t1 AT3G04670 48.148 81 36 2 183 257 240 320 2.24e-17 83.6
MS.gene034348.t1 AT2G37260 49.333 75 34 2 194 265 262 335 1.06e-16 81.6
MS.gene034348.t1 AT2G37260 48.438 64 31 2 200 263 84 145 3.54e-13 70.9
MS.gene034348.t1 AT2G37260 49.333 75 34 2 194 265 264 337 1.07e-16 81.6
MS.gene034348.t1 AT2G37260 48.438 64 31 2 200 263 86 147 3.55e-13 70.9
MS.gene034348.t1 AT2G37260 49.333 75 34 2 194 265 344 417 1.82e-16 81.6
MS.gene034348.t1 AT2G37260 48.438 64 31 2 200 263 166 227 5.09e-13 71.2
MS.gene034348.t1 AT3G58710 43.820 89 49 1 172 259 42 130 2.99e-16 79.0
MS.gene034348.t1 AT3G58710 43.820 89 49 1 172 259 43 131 3.00e-16 79.0
MS.gene034348.t1 AT5G52830 50.746 67 33 0 193 259 159 225 5.81e-16 79.3
MS.gene034348.t1 AT1G69310 39.216 102 54 3 158 256 103 199 6.10e-16 78.6
MS.gene034348.t1 AT4G01250 37.143 105 53 1 199 290 128 232 6.48e-16 78.6
MS.gene034348.t1 AT4G23550 48.485 66 34 0 194 259 135 200 1.13e-15 78.2
MS.gene034348.t1 AT2G34830 44.737 76 41 1 185 259 200 275 2.70e-15 78.2
MS.gene034348.t1 AT1G30650 44.737 76 41 1 185 259 202 277 3.28e-15 77.8
MS.gene034348.t1 AT2G34830 44.737 76 41 1 185 259 209 284 3.43e-15 77.8
MS.gene034348.t1 AT5G43290 40.698 86 48 3 180 263 93 177 6.18e-15 75.5
MS.gene034348.t1 AT2G46130 44.872 78 38 2 179 256 10 82 6.30e-14 68.2
MS.gene034348.t1 AT4G31800 61.538 39 15 0 198 236 175 213 2.04e-12 67.4
MS.gene034348.t1 AT2G46400 41.772 79 44 1 178 254 83 161 2.94e-12 67.8
MS.gene034348.t1 AT2G21900 40.909 66 38 1 194 259 104 168 6.55e-12 65.1
MS.gene034348.t1 AT5G45050 47.541 61 32 0 199 259 1152 1212 7.24e-12 68.6
MS.gene034348.t1 AT5G45050 47.541 61 32 0 199 259 1180 1240 7.28e-12 68.6
MS.gene034348.t1 AT5G45050 47.541 61 32 0 199 259 1041 1101 7.67e-12 68.2
MS.gene034348.t1 AT3G01080 49.180 61 29 2 199 259 205 263 3.01e-11 65.1

Find 97 sgRNAs with CRISPR-Local

Find 210 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGGTTCCAAGACAATTTA+TGG 0.128951 2.1:-13872014 MS.gene034348:CDS
ATTGCTCTTGTGAGGTAATT+TGG 0.146915 2.1:+13869507 None:intergenic
TTTGACTGATCTTGACTTCT+TGG 0.186141 2.1:+13871950 None:intergenic
GGTTATTAGGGAACTGGTTT+TGG 0.212904 2.1:+13869400 None:intergenic
CTGCTATTACTTCAATTATT+GGG 0.212910 2.1:-13869179 MS.gene034348:CDS
GCTGCTATTACTTCAATTAT+TGG 0.268652 2.1:-13869180 MS.gene034348:CDS
CTTGATGAGGAGAAACAAAA+TGG 0.281238 2.1:-13872049 MS.gene034348:CDS
AAATGGGAATGGTGGAGTTT+TGG 0.297182 2.1:-13872032 MS.gene034348:CDS
TTGCTCTTGTGAGGTAATTT+GGG 0.310844 2.1:+13869508 None:intergenic
CTAGTACCGTTATTATTGTT+TGG 0.316751 2.1:+13869147 None:intergenic
TTTGGTTTGGTGACTGAGTT+AGG 0.325584 2.1:+13869418 None:intergenic
AGGGAAATTGGAACTGGTTA+GGG 0.327267 2.1:+13869376 None:intergenic
ACATGCTTGATGAGGGTAAT+AGG 0.328005 2.1:-13872168 MS.gene034348:CDS
TTATCGATGCACCATGGCCT+TGG 0.349834 2.1:-13871529 MS.gene034348:CDS
GTTGCTATGCTTGAAGAATA+AGG 0.353526 2.1:+13869480 None:intergenic
AATAACGGTACTAGCAATAA+TGG 0.353919 2.1:-13869138 MS.gene034348:CDS
GGGAAATTGGAACTGGTTAG+GGG 0.369219 2.1:+13869377 None:intergenic
CCAAGACAATTTATGGAGCT+TGG 0.403211 2.1:-13872007 MS.gene034348:CDS
AAGGGAAATTGGAACTGGTT+AGG 0.406882 2.1:+13869375 None:intergenic
GGATGTCAATGGAGAAAGTA+TGG 0.409848 2.1:-13871591 MS.gene034348:CDS
TCCTAACTTCACTGCAGCTT+TGG 0.414246 2.1:-13869205 MS.gene034348:CDS
TGCTATGTCTTCCTCCATCA+TGG 0.419633 2.1:+13872385 None:intergenic
TATCGATGCACCATGGCCTT+GGG 0.424967 2.1:-13871528 MS.gene034348:CDS
GAAATTGGAACTGGTTAGGG+GGG 0.429542 2.1:+13869379 None:intergenic
GAGGGAAGGGAAATTGGAAC+TGG 0.429543 2.1:+13869370 None:intergenic
TGTACCATTTCCATAGCTGC+TGG 0.431979 2.1:+13869597 None:intergenic
TGCTTTGCCTCCAGCAGCTA+TGG 0.435611 2.1:-13869607 MS.gene034348:CDS
GCTTGTTCAACATTTGTTTG+AGG 0.439934 2.1:+13871770 None:intergenic
AGTCCATCAGCACTTGTCAT+TGG 0.447523 2.1:+13869537 None:intergenic
GCCAAAGCTGCAGTGAAGTT+AGG 0.449086 2.1:+13869204 None:intergenic
TCCAATGTAACAGTTGGAAA+TGG 0.451153 2.1:+13869441 None:intergenic
AGACACAAGTTCTTCAACCT+TGG 0.451540 2.1:+13871898 None:intergenic
CGATAATAAGCTCGAGGACA+CGG 0.453138 2.1:+13871546 None:intergenic
ACAATAGCTAACAACACTAA+TGG 0.455086 2.1:-13869108 MS.gene034348:CDS
TCCATTTCCAACTGTTACAT+TGG 0.455513 2.1:-13869442 MS.gene034348:CDS
GCCTCCAGCAGCTATGGAAA+TGG 0.457149 2.1:-13869601 MS.gene034348:CDS
ACAATTTATGGAGCTTGGAT+TGG 0.459747 2.1:-13872002 MS.gene034348:CDS
TAGTTACTCTACTGAGGAGT+TGG 0.459750 2.1:+13869035 None:intergenic
GGAAATTGGAACTGGTTAGG+GGG 0.470023 2.1:+13869378 None:intergenic
CACCTTCATTCTCTCAAGCT+CGG 0.471926 2.1:+13872210 None:intergenic
CCAAGCTCCATAAATTGTCT+TGG 0.475471 2.1:+13872007 None:intergenic
GAAGAGCAAAAGCAAGTGAT+TGG 0.479656 2.1:-13872079 MS.gene034348:CDS
AACCCTTGCTTTCCTCATAG+TGG 0.482051 2.1:+13871742 None:intergenic
GCAGATGCATTGGATGAGTA+TGG 0.482506 2.1:-13872131 MS.gene034348:CDS
TGAAAAGAAGGAATCCGATC+GGG 0.482638 2.1:-13871870 MS.gene034348:CDS
TGCTATTACTTCAATTATTG+GGG 0.494301 2.1:-13869178 MS.gene034348:CDS
TGTGTCTGATCATGAAAAGA+AGG 0.508518 2.1:-13871882 MS.gene034348:CDS
GCAGCTAAAACTCGATCTGC+AGG 0.523186 2.1:+13871827 None:intergenic
AGTTACTCTACTGAGGAGTT+GGG 0.523710 2.1:+13869036 None:intergenic
AGCTCGATCCGAGGCTAACA+TGG 0.526714 2.1:-13871711 MS.gene034348:intron
ATACTTATCACAACATATGA+AGG 0.527047 2.1:-13869642 MS.gene034348:CDS
GATAATAAGCTCGAGGACAC+GGG 0.530098 2.1:+13871547 None:intergenic
GGGTTGTCCTGTGAGAAAAC+AGG 0.534363 2.1:-13871508 MS.gene034348:intron
ACAACACATTGCAGATGCAT+TGG 0.536029 2.1:-13872141 MS.gene034348:CDS
CATAATTTGCACAGGTACAA+AGG 0.536458 2.1:-13869683 MS.gene034348:intron
GAGAAAGTATGGACAGAAGA+TGG 0.537071 2.1:-13871580 MS.gene034348:CDS
GGACCAATGACAAGTGCTGA+TGG 0.540715 2.1:-13869540 MS.gene034348:CDS
GCTGCAAGAATGTTACTGTC+AGG 0.544674 2.1:-13869561 MS.gene034348:CDS
TTGATGAGGAGAAACAAAAT+GGG 0.547963 2.1:-13872048 MS.gene034348:CDS
GAGAAACAAAATGGGAATGG+TGG 0.550957 2.1:-13872040 MS.gene034348:CDS
AGATCAATGATGGATGTCAA+TGG 0.557548 2.1:-13871602 MS.gene034348:CDS
CTGAGGAACATGCTTGATGA+GGG 0.560805 2.1:-13872175 MS.gene034348:CDS
GAGTATGGTGCAAGACAAGA+AGG 0.561536 2.1:-13872116 MS.gene034348:CDS
GAGCAAAAGCAAGTGATTGG+TGG 0.565607 2.1:-13872076 MS.gene034348:CDS
GTTAGGTCCAATGTAACAGT+TGG 0.567146 2.1:+13869435 None:intergenic
CACAGGACAACCCAAGGCCA+TGG 0.568081 2.1:+13871518 None:intergenic
ATGAAAAGAAGGAATCCGAT+CGG 0.570044 2.1:-13871871 MS.gene034348:CDS
AGGCCACTATGAGGAAAGCA+AGG 0.570684 2.1:-13871745 MS.gene034348:CDS
ACATCAAGTAACAATACCAT+TGG 0.571515 2.1:-13869078 MS.gene034348:CDS
TAACAATGAGGAAGATTCCA+AGG 0.572334 2.1:-13871915 MS.gene034348:CDS
GCACAGCCAAACAATAATAA+CGG 0.583839 2.1:-13869153 MS.gene034348:CDS
CTATGCTTGAAGAATAAGGA+AGG 0.594569 2.1:+13869484 None:intergenic
GGTGCAAGACAAGAAGGTAG+AGG 0.597094 2.1:-13872110 MS.gene034348:CDS
GAAGTGTACCATGTTAGCCT+CGG 0.600264 2.1:+13871703 None:intergenic
AACAAGCTGAGGCCACTATG+AGG 0.607043 2.1:-13871754 MS.gene034348:CDS
ACTGAGGAACATGCTTGATG+AGG 0.611969 2.1:-13872176 MS.gene034348:CDS
AGCCGAGCTTGAGAGAATGA+AGG 0.613065 2.1:-13872212 MS.gene034348:CDS
AACAAATGTTGAACAAGCTG+AGG 0.613373 2.1:-13871765 MS.gene034348:CDS
AAGGAAGGATTGCTCTTGTG+AGG 0.621106 2.1:+13869499 None:intergenic
TAGCATTAACTGTGTCAGCA+AGG 0.623284 2.1:+13869238 None:intergenic
CGAGCTTGAGAGAATGAAGG+TGG 0.635577 2.1:-13872209 MS.gene034348:CDS
ACCATTTCCATAGCTGCTGG+AGG 0.637423 2.1:+13869600 None:intergenic
GAGGAGAAACAAAATGGGAA+TGG 0.637776 2.1:-13872043 MS.gene034348:CDS
TATGGACAGAAGATGGCGAA+AGG 0.642826 2.1:-13871573 MS.gene034348:CDS
CAATGATCAATCCATGATGG+AGG 0.645307 2.1:-13872396 None:intergenic
AGACAAAAGAGCTAAGCTTG+AGG 0.649723 2.1:-13872351 MS.gene034348:intron
TTCAGTTAGAGCTCGATCCG+AGG 0.654330 2.1:-13871720 MS.gene034348:CDS
GGCCACTATGAGGAAAGCAA+GGG 0.654709 2.1:-13871744 MS.gene034348:CDS
ATTACTTGCAAATAACAATG+AGG 0.658433 2.1:-13871927 MS.gene034348:CDS
AGCTTATTATCGATGCACCA+TGG 0.661870 2.1:-13871535 MS.gene034348:CDS
GAAAAGAAGGAATCCGATCG+GGG 0.662543 2.1:-13871869 MS.gene034348:CDS
ACTGTGTCAGCAAGGTTCTG+TGG 0.667152 2.1:+13869246 None:intergenic
GATTGGTGGAAAACTTGATG+AGG 0.667331 2.1:-13872062 MS.gene034348:CDS
GTGCATCGATAATAAGCTCG+AGG 0.678750 2.1:+13871540 None:intergenic
GTGGGCTAGTTACTCTACTG+AGG 0.679123 2.1:+13869029 None:intergenic
AGGTGGAGAATCATCAACTG+AGG 0.706865 2.1:-13872192 MS.gene034348:CDS
AATGTCTGACCAAATACCTG+AGG 0.730527 2.1:+13869336 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTCAAAAAAAAAATGAAAT+TGG + chr2.1:13870966-13870985 None:intergenic 10.0%
!! AATAAAGACAAAAGATAATT+TGG - chr2.1:13870762-13870781 MS.gene034348:intron 15.0%
!! CATCTTAAAAATAAAAATGA+CGG + chr2.1:13870939-13870958 None:intergenic 15.0%
!!! AACTTTCTTTATAAACATTT+TGG - chr2.1:13871251-13871270 MS.gene034348:intron 15.0%
!!! GTCATTTTTATTTTTAAGAT+GGG - chr2.1:13870938-13870957 MS.gene034348:intron 15.0%
!!! TAATTTCGATAAACTTTTTT+AGG + chr2.1:13871360-13871379 None:intergenic 15.0%
!!! TAATTTCTATAAACTTTTTC+AGG + chr2.1:13870370-13870389 None:intergenic 15.0%
!! AAAAGATAATTTGGACATTA+GGG - chr2.1:13870771-13870790 MS.gene034348:intron 20.0%
!! ATACAAACACGTTTAAAAAA+AGG + chr2.1:13871151-13871170 None:intergenic 20.0%
!! TAAATGTTAGCTATAATAGT+TGG - chr2.1:13869950-13869969 MS.gene034348:intron 20.0%
!! TGTTTATATTGTCATTAAAC+TGG - chr2.1:13870628-13870647 MS.gene034348:intron 20.0%
!! TTTAAACGTGTTTGTATAAA+TGG - chr2.1:13871154-13871173 MS.gene034348:intron 20.0%
!!! CGTCATTTTTATTTTTAAGA+TGG - chr2.1:13870937-13870956 MS.gene034348:intron 20.0%
!!! CTGTTTTATATTGACTTATT+TGG + chr2.1:13870466-13870485 None:intergenic 20.0%
!!! GTTACTGTAGTTTAATATTT+TGG + chr2.1:13870512-13870531 None:intergenic 20.0%
!!! TAACTTTTTATTTAGAGCTT+AGG - chr2.1:13871048-13871067 MS.gene034348:intron 20.0%
!!! TAATTCGGGTTTTATAAAAA+TGG + chr2.1:13871668-13871687 None:intergenic 20.0%
!!! TTATATCTTCCATTTTATTC+TGG + chr2.1:13870584-13870603 None:intergenic 20.0%
!!! TTTCTTTATAAACATTTTGG+TGG - chr2.1:13871254-13871273 MS.gene034348:intron 20.0%
! AAAGACTTATGAGACTATTT+GGG + chr2.1:13870427-13870446 None:intergenic 25.0%
! AAAGATAATTTGGACATTAG+GGG - chr2.1:13870772-13870791 MS.gene034348:intron 25.0%
! AAGTTGAAATTCGCTTATTA+TGG + chr2.1:13871236-13871255 None:intergenic 25.0%
! AGTTGAAATTCGCTTATTAT+GGG + chr2.1:13871235-13871254 None:intergenic 25.0%
! ATACTTATCACAACATATGA+AGG - chr2.1:13871779-13871798 MS.gene034348:CDS 25.0%
! ATCAAAAAAATTGAGCAATG+TGG + chr2.1:13870826-13870845 None:intergenic 25.0%
! ATTACTTGCAAATAACAATG+AGG - chr2.1:13869494-13869513 MS.gene034348:CDS 25.0%
! CAAAAGATAATTTGGACATT+AGG - chr2.1:13870770-13870789 MS.gene034348:intron 25.0%
! CAATAATATCCAATCAATCA+TGG - chr2.1:13870180-13870199 MS.gene034348:intron 25.0%
! CTGCTATTACTTCAATTATT+GGG - chr2.1:13872242-13872261 MS.gene034348:intron 25.0%
! TAAAACTGTTTATCCAAACA+TGG + chr2.1:13870240-13870259 None:intergenic 25.0%
! TAGGTTTATACGCATTATTT+GGG - chr2.1:13871067-13871086 MS.gene034348:intron 25.0%
! TCAAAAAAATTGAGCAATGT+GGG + chr2.1:13870825-13870844 None:intergenic 25.0%
! TCGATATAATCAAACTCTTA+AGG + chr2.1:13870714-13870733 None:intergenic 25.0%
! TGCTATTACTTCAATTATTG+GGG - chr2.1:13872243-13872262 MS.gene034348:intron 25.0%
! TTAAATGAATAATCATCGAG+TGG - chr2.1:13869147-13869166 MS.gene034348:CDS 25.0%
! TTAGGTTTATACGCATTATT+TGG - chr2.1:13871066-13871085 MS.gene034348:intron 25.0%
! TTATATCGATGCTTGTTTAA+CGG - chr2.1:13870725-13870744 MS.gene034348:intron 25.0%
! TTATATTGTCATTAAACTGG+AGG - chr2.1:13870631-13870650 MS.gene034348:intron 25.0%
! TTTATAAAAATGGTTCACGA+CGG + chr2.1:13871658-13871677 None:intergenic 25.0%
!! ACAGCTTGATAACTTTAATT+CGG + chr2.1:13871683-13871702 None:intergenic 25.0%
!! GAAGAATGAAATGTTTGTTT+TGG - chr2.1:13869759-13869778 MS.gene034348:intron 25.0%
!! GACAATATAAACATGCTTTT+AGG + chr2.1:13870621-13870640 None:intergenic 25.0%
!! GGATTACTACAATTGTATTT+TGG + chr2.1:13871213-13871232 None:intergenic 25.0%
!! TTGAACCAATCAAAATTTTC+AGG - chr2.1:13872109-13872128 MS.gene034348:CDS 25.0%
!!! GCTCAATTTTTTTGATTGTT+TGG - chr2.1:13870830-13870849 MS.gene034348:intron 25.0%
AAGATAATTTGGACATTAGG+GGG - chr2.1:13870773-13870792 MS.gene034348:intron 30.0%
AAGCACTATTGAGACTATTT+GGG + chr2.1:13871416-13871435 None:intergenic 30.0%
AATAACGGTACTAGCAATAA+TGG - chr2.1:13872283-13872302 MS.gene034348:intron 30.0%
AATTACCTGAAAAGAGCTTA+TGG - chr2.1:13870385-13870404 MS.gene034348:intron 30.0%
AATTACCTGAAATGAGCTTA+TGG - chr2.1:13871375-13871394 MS.gene034348:intron 30.0%
ACAATAGCTAACAACACTAA+TGG - chr2.1:13872313-13872332 MS.gene034348:intron 30.0%
ACACTCAAACCAGAATAAAA+TGG - chr2.1:13870572-13870591 MS.gene034348:intron 30.0%
ACATCAAGTAACAATACCAT+TGG - chr2.1:13872343-13872362 MS.gene034348:intron 30.0%
AGCATGCATATAAGATCAAT+TGG + chr2.1:13870063-13870082 None:intergenic 30.0%
ATTACCTGAAAAGAGCTTAT+GGG - chr2.1:13870386-13870405 MS.gene034348:intron 30.0%
CAAAGACTTATGAGACTATT+TGG + chr2.1:13870428-13870447 None:intergenic 30.0%
CTAGTACCGTTATTATTGTT+TGG + chr2.1:13872277-13872296 None:intergenic 30.0%
GCTGCTATTACTTCAATTAT+TGG - chr2.1:13872241-13872260 MS.gene034348:intron 30.0%
GTTGAAATTCGCTTATTATG+GGG + chr2.1:13871234-13871253 None:intergenic 30.0%
TAAGCACTATTGAGACTATT+TGG + chr2.1:13871417-13871436 None:intergenic 30.0%
TTGATGAGGAGAAACAAAAT+GGG - chr2.1:13869373-13869392 MS.gene034348:CDS 30.0%
! ACATGTAACATAATTTGCAC+AGG - chr2.1:13871730-13871749 MS.gene034348:CDS 30.0%
! CAGCTTGATAACTTTAATTC+GGG + chr2.1:13871682-13871701 None:intergenic 30.0%
! CTTTTGTATCAGATCAATGA+TGG - chr2.1:13869809-13869828 MS.gene034348:intron 30.0%
! TTTGGTTCCAAGACAATTTA+TGG - chr2.1:13869407-13869426 MS.gene034348:CDS 30.0%
!! GAAGTCCTGAAAATTTTGAT+TGG + chr2.1:13872117-13872136 None:intergenic 30.0%
!!! AGTTGGGATTGTTGATTTTA+GGG + chr2.1:13872372-13872391 None:intergenic 30.0%
AAACATGTGCCATGATTGAT+TGG + chr2.1:13870192-13870211 None:intergenic 35.0%
AACAAATGTTGAACAAGCTG+AGG - chr2.1:13869656-13869675 MS.gene034348:CDS 35.0%
ACAATTTATGGAGCTTGGAT+TGG - chr2.1:13869419-13869438 MS.gene034348:CDS 35.0%
ACTACAGTAACAACCAAAGT+CGG - chr2.1:13870521-13870540 MS.gene034348:intron 35.0%
ACTTTGACCAACCAAATCAT+TGG + chr2.1:13871300-13871319 None:intergenic 35.0%
ATGAAAAGAAGGAATCCGAT+CGG - chr2.1:13869550-13869569 MS.gene034348:CDS 35.0%
ATTGCTCTTGTGAGGTAATT+TGG + chr2.1:13871917-13871936 None:intergenic 35.0%
ATTGTCATTAAACTGGAGGT+TGG - chr2.1:13870635-13870654 MS.gene034348:intron 35.0%
CTATGCTTGAAGAATAAGGA+AGG + chr2.1:13871940-13871959 None:intergenic 35.0%
CTTGATGAGGAGAAACAAAA+TGG - chr2.1:13869372-13869391 MS.gene034348:CDS 35.0%
CTTTGACCAACCAAATCATT+GGG + chr2.1:13871299-13871318 None:intergenic 35.0%
GCACAGCCAAACAATAATAA+CGG - chr2.1:13872268-13872287 MS.gene034348:intron 35.0%
GCTTGTTCAACATTTGTTTG+AGG + chr2.1:13869654-13869673 None:intergenic 35.0%
GGCACTGTTATAATATGTCA+TGG - chr2.1:13869980-13869999 MS.gene034348:intron 35.0%
GTTGCTATGCTTGAAGAATA+AGG + chr2.1:13871944-13871963 None:intergenic 35.0%
TAACAATGAGGAAGATTCCA+AGG - chr2.1:13869506-13869525 MS.gene034348:CDS 35.0%
TATAAAACAGACCCCTAATG+AGG - chr2.1:13870476-13870495 MS.gene034348:intron 35.0%
TCCAATGTAACAGTTGGAAA+TGG + chr2.1:13871983-13872002 None:intergenic 35.0%
TCCATTTCCAACTGTTACAT+TGG - chr2.1:13871979-13871998 MS.gene034348:CDS 35.0%
TGTGTCTGATCATGAAAAGA+AGG - chr2.1:13869539-13869558 MS.gene034348:CDS 35.0%
TTGCTCTTGTGAGGTAATTT+GGG + chr2.1:13871916-13871935 None:intergenic 35.0%
TTTGACTGATCTTGACTTCT+TGG + chr2.1:13869474-13869493 None:intergenic 35.0%
! AATTTTCTGCCTCAGGTATT+TGG - chr2.1:13872076-13872095 MS.gene034348:CDS 35.0%
! AGCTTGAGATTGATTTAGCT+AGG - chr2.1:13870144-13870163 MS.gene034348:intron 35.0%
! CATAATTTGCACAGGTACAA+AGG - chr2.1:13871738-13871757 MS.gene034348:CDS 35.0%
! TAACATACCTGTTTTCTCAC+AGG + chr2.1:13869923-13869942 None:intergenic 35.0%
! TAGTAGAAGTACATGAGCTA+TGG + chr2.1:13870112-13870131 None:intergenic 35.0%
! TCAAACTCTTAAGGTGCTTT+CGG + chr2.1:13870705-13870724 None:intergenic 35.0%
!! AATTTTGAGGGAAGGGAAAT+TGG + chr2.1:13872060-13872079 None:intergenic 35.0%
!! AGATCAATGATGGATGTCAA+TGG - chr2.1:13869819-13869838 MS.gene034348:intron 35.0%
!!! GAGTTGGGATTGTTGATTTT+AGG + chr2.1:13872373-13872392 None:intergenic 35.0%
AAGGGAAATTGGAACTGGTT+AGG + chr2.1:13872049-13872068 None:intergenic 40.0%
AATGTCTGACCAAATACCTG+AGG + chr2.1:13872088-13872107 None:intergenic 40.0%
ACAACACATTGCAGATGCAT+TGG - chr2.1:13869280-13869299 MS.gene034348:CDS 40.0%
ACATGCCATAAGCTCATTTC+AGG + chr2.1:13871383-13871402 None:intergenic 40.0%
ACATGCTTGATGAGGGTAAT+AGG - chr2.1:13869253-13869272 MS.gene034348:CDS 40.0%
ACCAAATCATTGGGCTCAAA+TGG + chr2.1:13871290-13871309 None:intergenic 40.0%
ACCATTTGAGCCCAATGATT+TGG - chr2.1:13871286-13871305 MS.gene034348:intron 40.0%
ACTTCAACCTACCTCATTAG+GGG + chr2.1:13871479-13871498 None:intergenic 40.0%
AGACAAAAGAGCTAAGCTTG+AGG - chr2.1:13869070-13869089 MS.gene034348:CDS 40.0%
AGACACAAGTTCTTCAACCT+TGG + chr2.1:13869526-13869545 None:intergenic 40.0%
AGCTTATTATCGATGCACCA+TGG - chr2.1:13869886-13869905 MS.gene034348:intron 40.0%
AGGGAAATTGGAACTGGTTA+GGG + chr2.1:13872048-13872067 None:intergenic 40.0%
CAGAGTTGAGAACTCAAAAC+AGG + chr2.1:13870025-13870044 None:intergenic 40.0%
CCAAGACAATTTATGGAGCT+TGG - chr2.1:13869414-13869433 MS.gene034348:CDS 40.0%
CCAAGCTCCATAAATTGTCT+TGG + chr2.1:13869417-13869436 None:intergenic 40.0%
CTACAGTAACAACCAAAGTC+GGG - chr2.1:13870522-13870541 MS.gene034348:intron 40.0%
GAAGAGCAAAAGCAAGTGAT+TGG - chr2.1:13869342-13869361 MS.gene034348:CDS 40.0%
GACTTCAACCTACCTCATTA+GGG + chr2.1:13871480-13871499 None:intergenic 40.0%
GAGAAACAAAATGGGAATGG+TGG - chr2.1:13869381-13869400 MS.gene034348:CDS 40.0%
GAGGAGAAACAAAATGGGAA+TGG - chr2.1:13869378-13869397 MS.gene034348:CDS 40.0%
GATTGGTGGAAAACTTGATG+AGG - chr2.1:13869359-13869378 MS.gene034348:CDS 40.0%
GGATGTCAATGGAGAAAGTA+TGG - chr2.1:13869830-13869849 MS.gene034348:intron 40.0%
GTCTTCAACATTTCGATGCT+AGG - chr2.1:13870214-13870233 MS.gene034348:intron 40.0%
GTTAGGTCCAATGTAACAGT+TGG + chr2.1:13871989-13872008 None:intergenic 40.0%
TAGCATTAACTGTGTCAGCA+AGG + chr2.1:13872186-13872205 None:intergenic 40.0%
TGAAAAGAAGGAATCCGATC+GGG - chr2.1:13869551-13869570 MS.gene034348:CDS 40.0%
TGACTTCAACCTACCTCATT+AGG + chr2.1:13871481-13871500 None:intergenic 40.0%
TTGAGCAATGTGGGACATAA+AGG + chr2.1:13870816-13870835 None:intergenic 40.0%
! AACTGGAGGTTGGAGTTTTA+AGG - chr2.1:13870645-13870664 MS.gene034348:intron 40.0%
! ACCTGAGGCAGAAAATTTTG+AGG + chr2.1:13872073-13872092 None:intergenic 40.0%
! CCTGAGGCAGAAAATTTTGA+GGG + chr2.1:13872072-13872091 None:intergenic 40.0%
! GAGAAAGTATGGACAGAAGA+TGG - chr2.1:13869841-13869860 MS.gene034348:intron 40.0%
!! AAATGGGAATGGTGGAGTTT+TGG - chr2.1:13869389-13869408 MS.gene034348:CDS 40.0%
!! AGGCAGAAAATTTTGAGGGA+AGG + chr2.1:13872068-13872087 None:intergenic 40.0%
!! GCTATAATAGTTGGTGACAC+AGG - chr2.1:13869959-13869978 MS.gene034348:intron 40.0%
!! GGCAGAAAATTTTGAGGGAA+GGG + chr2.1:13872067-13872086 None:intergenic 40.0%
!! GGTTATTAGGGAACTGGTTT+TGG + chr2.1:13872024-13872043 None:intergenic 40.0%
!! TTTGAGCCCAATGATTTGGT+TGG - chr2.1:13871290-13871309 MS.gene034348:intron 40.0%
!! TTTGGTTTGGTGACTGAGTT+AGG + chr2.1:13872006-13872025 None:intergenic 40.0%
!!! GTTGATTTTAGGGCTTCCAA+TGG + chr2.1:13872362-13872381 None:intergenic 40.0%
!!! TTAGGGAACTGGTTTTGGTT+TGG + chr2.1:13872019-13872038 None:intergenic 40.0%
AAACAGACCCCTAATGAGGT+AGG - chr2.1:13870480-13870499 MS.gene034348:intron 45.0%
AACCCTTGCTTTCCTCATAG+TGG + chr2.1:13869682-13869701 None:intergenic 45.0%
AACTGGTTAGGGGGGTTATT+AGG + chr2.1:13872037-13872056 None:intergenic 45.0%
AAGGAAGGATTGCTCTTGTG+AGG + chr2.1:13871925-13871944 None:intergenic 45.0%
ACCTGAAAAGAGCTTATGGG+TGG - chr2.1:13870389-13870408 MS.gene034348:intron 45.0%
ACTGAAGTAACGACCGAAGT+CGG - chr2.1:13871510-13871529 MS.gene034348:CDS 45.0%
ACTGAGGAACATGCTTGATG+AGG - chr2.1:13869245-13869264 MS.gene034348:CDS 45.0%
ACTGGTTAGGGGGGTTATTA+GGG + chr2.1:13872036-13872055 None:intergenic 45.0%
AGGTGGAGAATCATCAACTG+AGG - chr2.1:13869229-13869248 MS.gene034348:CDS 45.0%
AGTCCATCAGCACTTGTCAT+TGG + chr2.1:13871887-13871906 None:intergenic 45.0%
CAAGAATTGTGACCCGACTT+CGG + chr2.1:13871526-13871545 None:intergenic 45.0%
CACCTTCATTCTCTCAAGCT+CGG + chr2.1:13869214-13869233 None:intergenic 45.0%
CCTGAAAAGAGCTTATGGGT+GGG - chr2.1:13870390-13870409 MS.gene034348:intron 45.0%
CGATAATAAGCTCGAGGACA+CGG + chr2.1:13869878-13869897 None:intergenic 45.0%
CTGAGGAACATGCTTGATGA+GGG - chr2.1:13869246-13869265 MS.gene034348:CDS 45.0%
GAAAAGAAGGAATCCGATCG+GGG - chr2.1:13869552-13869571 MS.gene034348:CDS 45.0%
GAAATTGGAACTGGTTAGGG+GGG + chr2.1:13872045-13872064 None:intergenic 45.0%
GAGCAAAAGCAAGTGATTGG+TGG - chr2.1:13869345-13869364 MS.gene034348:CDS 45.0%
GAGTATGGTGCAAGACAAGA+AGG - chr2.1:13869305-13869324 MS.gene034348:CDS 45.0%
GATAATAAGCTCGAGGACAC+GGG + chr2.1:13869877-13869896 None:intergenic 45.0%
GCAGATGCATTGGATGAGTA+TGG - chr2.1:13869290-13869309 MS.gene034348:CDS 45.0%
GCTAAAACAGACCCCTAATG+AGG - chr2.1:13871465-13871484 MS.gene034348:intron 45.0%
GCTGCAAGAATGTTACTGTC+AGG - chr2.1:13871860-13871879 MS.gene034348:CDS 45.0%
GCTTCAACCTACCTCATTAG+GGG + chr2.1:13870490-13870509 None:intergenic 45.0%
GGAAATTGGAACTGGTTAGG+GGG + chr2.1:13872046-13872065 None:intergenic 45.0%
GGCTTCAACCTACCTCATTA+GGG + chr2.1:13870491-13870510 None:intergenic 45.0%
GGGAAATTGGAACTGGTTAG+GGG + chr2.1:13872047-13872066 None:intergenic 45.0%
TATGGACAGAAGATGGCGAA+AGG - chr2.1:13869848-13869867 MS.gene034348:intron 45.0%
TCCTAACTTCACTGCAGCTT+TGG - chr2.1:13872216-13872235 MS.gene034348:CDS 45.0%
TGGCTTCAACCTACCTCATT+AGG + chr2.1:13870492-13870511 None:intergenic 45.0%
TGTACCATTTCCATAGCTGC+TGG + chr2.1:13871827-13871846 None:intergenic 45.0%
TTGTGATGCTACTGCGACTA+AGG + chr2.1:13871587-13871606 None:intergenic 45.0%
TTTCGATGCTAGGCCATGTT+TGG - chr2.1:13870224-13870243 MS.gene034348:intron 45.0%
! CCCTCAAAATTTTCTGCCTC+AGG - chr2.1:13872069-13872088 MS.gene034348:CDS 45.0%
! GAAGTGTACCATGTTAGCCT+CGG + chr2.1:13869721-13869740 None:intergenic 45.0%
! GCTTCTTTCTTTTCCCCGAT+CGG + chr2.1:13869568-13869587 None:intergenic 45.0%
! GTGCATCGATAATAAGCTCG+AGG + chr2.1:13869884-13869903 None:intergenic 45.0%
! TTTTCTCACAGGACAACCCA+AGG + chr2.1:13869912-13869931 None:intergenic 45.0%
!!! TTTATTTTTATTTTTAAGAT+GGG - chr2.1:13870996-13871015 MS.gene034348:intron 5.0%
!!! TTTTATTTTTATTTTTAAGA+TGG - chr2.1:13870995-13871014 MS.gene034348:intron 5.0%
AACAAGCTGAGGCCACTATG+AGG - chr2.1:13869667-13869686 MS.gene034348:CDS 50.0%
ACCATTTCCATAGCTGCTGG+AGG + chr2.1:13871824-13871843 None:intergenic 50.0%
ACTGTGTCAGCAAGGTTCTG+TGG + chr2.1:13872178-13872197 None:intergenic 50.0%
AGCCGAGCTTGAGAGAATGA+AGG - chr2.1:13869209-13869228 MS.gene034348:CDS 50.0%
AGGCCACTATGAGGAAAGCA+AGG - chr2.1:13869676-13869695 MS.gene034348:intron 50.0%
CGAGCTTGAGAGAATGAAGG+TGG - chr2.1:13869212-13869231 MS.gene034348:CDS 50.0%
CTGAAGTAACGACCGAAGTC+GGG - chr2.1:13871511-13871530 MS.gene034348:CDS 50.0%
GAGGGAAGGGAAATTGGAAC+TGG + chr2.1:13872054-13872073 None:intergenic 50.0%
GCAGCTAAAACTCGATCTGC+AGG + chr2.1:13869597-13869616 None:intergenic 50.0%
GCCAAAGCTGCAGTGAAGTT+AGG + chr2.1:13872220-13872239 None:intergenic 50.0%
GGCCACTATGAGGAAAGCAA+GGG - chr2.1:13869677-13869696 MS.gene034348:intron 50.0%
GGGTTGTCCTGTGAGAAAAC+AGG - chr2.1:13869913-13869932 MS.gene034348:intron 50.0%
GGTGCAAGACAAGAAGGTAG+AGG - chr2.1:13869311-13869330 MS.gene034348:CDS 50.0%
TAGGGGGGTTATTAGGGAAC+TGG + chr2.1:13872030-13872049 None:intergenic 50.0%
TATCGATGCACCATGGCCTT+GGG - chr2.1:13869893-13869912 MS.gene034348:intron 50.0%
TTATCGATGCACCATGGCCT+TGG - chr2.1:13869892-13869911 MS.gene034348:intron 50.0%
TTCAGTTAGAGCTCGATCCG+AGG - chr2.1:13869701-13869720 MS.gene034348:intron 50.0%
! CAAGAAGTACGACCCGACTT+TGG + chr2.1:13870537-13870556 None:intergenic 50.0%
! CCCACCCATAAGCTCTTTTC+AGG + chr2.1:13870393-13870412 None:intergenic 50.0%
!! ACATTAGGGGGTGCTTGTAG+CGG - chr2.1:13870785-13870804 MS.gene034348:intron 50.0%
!! GGACCAATGACAAGTGCTGA+TGG - chr2.1:13871881-13871900 MS.gene034348:CDS 50.0%
AGCTCGATCCGAGGCTAACA+TGG - chr2.1:13869710-13869729 MS.gene034348:intron 55.0%
AGGATGCGAGGGCGATATCA+TGG + chr2.1:13871629-13871648 None:intergenic 55.0%
ATGGTTCACGACGGTGACCT+AGG + chr2.1:13871649-13871668 None:intergenic 55.0%
GCCTCCAGCAGCTATGGAAA+TGG - chr2.1:13871820-13871839 MS.gene034348:CDS 55.0%
TGATATCGCCCTCGCATCCT+AGG - chr2.1:13871629-13871648 MS.gene034348:intron 55.0%
TGCTTTGCCTCCAGCAGCTA+TGG - chr2.1:13871814-13871833 MS.gene034348:CDS 55.0%
CACAGGACAACCCAAGGCCA+TGG + chr2.1:13869906-13869925 None:intergenic 60.0%
GACGGTGACCTAGGATGCGA+GGG + chr2.1:13871640-13871659 None:intergenic 60.0%
!! AGGGGGTGCTTGTAGCGGAT+AGG - chr2.1:13870790-13870809 MS.gene034348:intron 60.0%
CGACGGTGACCTAGGATGCG+AGG + chr2.1:13871641-13871660 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 13869038 13872405 13869038 ID=MS.gene034348
chr2.1 mRNA 13869038 13872405 13869038 ID=MS.gene034348.t1;Parent=MS.gene034348
chr2.1 exon 13872352 13872405 13872352 ID=MS.gene034348.t1.exon1;Parent=MS.gene034348.t1
chr2.1 CDS 13872352 13872405 13872352 ID=cds.MS.gene034348.t1;Parent=MS.gene034348.t1
chr2.1 exon 13871712 13872248 13871712 ID=MS.gene034348.t1.exon2;Parent=MS.gene034348.t1
chr2.1 CDS 13871712 13872248 13871712 ID=cds.MS.gene034348.t1;Parent=MS.gene034348.t1
chr2.1 exon 13871509 13871622 13871509 ID=MS.gene034348.t1.exon3;Parent=MS.gene034348.t1
chr2.1 CDS 13871509 13871622 13871509 ID=cds.MS.gene034348.t1;Parent=MS.gene034348.t1
chr2.1 exon 13869038 13869691 13869038 ID=MS.gene034348.t1.exon4;Parent=MS.gene034348.t1
chr2.1 CDS 13869038 13869691 13869038 ID=cds.MS.gene034348.t1;Parent=MS.gene034348.t1
Gene Sequence

>MS.gene034348

ATGATGGAGGAAGACATAGCAAGTAATTCAGAAGACAAAAGAGCTAAGCTTGAGGTAGAGAAAATTTATTATATGTAACAACAAATTCAATAATTTGATGAAGTTGTAGTTAAATGAATAATCATCGAGTGGTTTCTATAATTAAATTATTTTTCAGCTCGTTGTTCTTCAAGCCGAGCTTGAGAGAATGAAGGTGGAGAATCATCAACTGAGGAACATGCTTGATGAGGGTAATAGGAAGTACAACACATTGCAGATGCATTGGATGAGTATGGTGCAAGACAAGAAGGTAGAGGATTGTAATGAAGAGCAAAAGCAAGTGATTGGTGGAAAACTTGATGAGGAGAAACAAAATGGGAATGGTGGAGTTTTGGTTCCAAGACAATTTATGGAGCTTGGATTGGCTGCAAATAATTCTGATGCTATTGATGAACCAAGAAGTCAAGATCAGTCAAAATTACTTGCAAATAACAATGAGGAAGATTCCAAGGTTGAAGAACTTGTGTCTGATCATGAAAAGAAGGAATCCGATCGGGGAAAAGAAAGAAGCAGTAGTCCTGCAGATCGAGTTTTAGCTGCTAATAATACTAATAATAATGTTGCAAACTTTAGTCCTCAAACAAATGTTGAACAAGCTGAGGCCACTATGAGGAAAGCAAGGGTTTCAGTTAGAGCTCGATCCGAGGCTAACATGGTACACTTCAATTTCACATTTTAGTTAGAAGAATGAAATGTTTGTTTTGGCTTTTATATGATGCTAAAGTTTTTATTCTTTTGTATCAGATCAATGATGGATGTCAATGGAGAAAGTATGGACAGAAGATGGCGAAAGGAAACCCGTGTCCTCGAGCTTATTATCGATGCACCATGGCCTTGGGTTGTCCTGTGAGAAAACAGGTATGTTATTCGATATAAATGTTAGCTATAATAGTTGGTGACACAGGCACTGTTATAATATGTCATGGTCATTCACAAACATAATTTCCTGTTTTGAGTTCTCAACTCTGTCAAGTTTTATTCTACCAATTGATCTTATATGCATGCTCAATTAAATTAGTTTCAAATTATGCTCCATAGCTCATGTACTTCTACTAAAAAATGTGATGAGCTTGAGATTGATTTAGCTAGGATATATAAGTATACAATAATATCCAATCAATCATGGCACATGTTTCAGTCTTCAACATTTCGATGCTAGGCCATGTTTGGATAAACAGTTTTATTGAGCACTTATCATATAAGTGCTTATGTATAGACTATTTCTATAACAGAAGATAAAATAAAGTCAAACTGTGTTCATATAAATTATAAGTTGTTTTCATTAGCTATCCTGAAAAAGTTTATAGAAATTACCTGAAAAGAGCTTATGGGTGGGTCATAAGCTATCCCAAATAGTCTCATAAGTCTTTGTACTAGTAGATAAGTCCAAATAAGTCAATATAAAACAGACCCCTAATGAGGTAGGTTGAAGCCAAAATATTAAACTACAGTAACAACCAAAGTCGGGTCGTACTTCTTGATACTAAGCAGAATCACACTCAAACCAGAATAAAATGGAAGATATAAGATAAGTTTTTGTGCCTAAAAGCATGTTTATATTGTCATTAAACTGGAGGTTGGAGTTTTAAGGTATCATATATTCTCTGCATTTTAAAATTCAAATTCCGAAAGCACCTTAAGAGTTTGATTATATCGATGCTTGTTTAACGGTTTCTTCAAAATAAAATAAAGACAAAAGATAATTTGGACATTAGGGGGTGCTTGTAGCGGATAGGCCTTTATGTCCCACATTGCTCAATTTTTTTGATTGTTTGGTGTATAAATATGTTTGAAAACTCTCATTATTTGAGATGTCTAGACGAAGATGTTTACATTCAAAATTGAACATCTTCAGTTTGCCGTCATTTTTATTTTTAAGATGGGATCCAATTTCATTTTTTTTTTGAAAGATTTAACTTTTTATTTTTATTTTTAAGATGGGATCCAATTTCATTTTTTTTTTGAAAGATTTAACTTTTTATTTAGAGCTTAGGTTTATACGCATTATTTGGGCACAAAAATACATAGCATTATTCAGCTATTTTAAAAATACATATTATGTGATTCTTTTCCTTTTTTTAAACGTGTTTGTATAAATGGTGTGACTAAATAATTGTGAGCTTGTAAGACTTACCAAAATACAATTGTAGTAATCCCCATAATAAGCGAATTTCAACTTTCTTTATAAACATTTTGGTGGATCTCATTAACCATTTGAGCCCAATGATTTGGTTGGTCAAAGTGTTTTCATATAAGTTATAAGTTGTTTTCATTAGTTATCCTAAAAAAGTTTATCGAAATTACCTGAAATGAGCTTATGGCATGTCATAAACTCTCCCAAATAGTCTCAATAGTGCTTATACAAGTAGATAAGTCTAAATCAGTCAAGCTAAAACAGACCCCTAATGAGGTAGGTTGAAGTCAAAATATTAAACTGAAGTAACGACCGAAGTCGGGTCACAATTCTTGATACTACACAAAATCACACTCAAATGTAACTGATGCGACCTTAGTCGCAGTAGCATCACAAACATAAAGACGTAAAAAAACCATGATATCGCCCTCGCATCCTAGGTCACCGTCGTGAACCATTTTTATAAAACCCGAATTAAAGTTATCAAGCTGTTTATGTCTAACTAGAGATCAATCTAAGACATGTAACATAATTTGCACAGGTACAAAGGTGTGCTGAAGACAAAACAATACTTATCACAACATATGAAGGACATCACATTCATGCTTTGCCTCCAGCAGCTATGGAAATGGTACAAACAACATCATCAGCTGCAAGAATGTTACTGTCAGGACCAATGACAAGTGCTGATGGACTAATGAACCCAAATTACCTCACAAGAGCAATCCTTCCTTATTCTTCAAGCATAGCAACTATCTCAGCATCAGCTCCATTTCCAACTGTTACATTGGACCTAACTCAGTCACCAAACCAAAACCAGTTCCCTAATAACCCCCCTAACCAGTTCCAATTTCCCTTCCCTCAAAATTTTCTGCCTCAGGTATTTGGTCAGACATTGTTGAACCAATCAAAATTTTCAGGACTTCAAATGTCTCAAGATGCAGCAAACAGTTCTCAGCAGACACCACAGAACCTTGCTGACACAGTTAATGCTATTGCAGCTGATCCTAACTTCACTGCAGCTTTGGCAGCTGCTATTACTTCAATTATTGGGGCTGCACAGCCAAACAATAATAACGGTACTAGCAATAATGGTAACAGTACAATAGCTAACAACACTAATGGCAATGTTACATCAAGTAACAATACCATTGGAAGCCCTAAAATCAACAATCCCAACTCCTCAGTAGAGTAA
Protein sequence

>MS.gene034348.t1

MMEEDIASNSEDKRAKLELVVLQAELERMKVENHQLRNMLDEGNRKYNTLQMHWMSMVQDKKVEDCNEEQKQVIGGKLDEEKQNGNGGVLVPRQFMELGLAANNSDAIDEPRSQDQSKLLANNNEEDSKVEELVSDHEKKESDRGKERSSSPADRVLAANNTNNNVANFSPQTNVEQAEATMRKARVSVRARSEANMINDGCQWRKYGQKMAKGNPCPRAYYRCTMALGCPVRKQVQRCAEDKTILITTYEGHHIHALPPAAMEMVQTTSSAARMLLSGPMTSADGLMNPNYLTRAILPYSSSIATISASAPFPTVTLDLTQSPNQNQFPNNPPNQFQFPFPQNFLPQVFGQTLLNQSKFSGLQMSQDAANSSQQTPQNLADTVNAIAADPNFTAALAAAITSIIGAAQPNNNNGTSNNGNSTIANNTNGNVTSSNNTIGSPKINNPNSSVE