AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene034440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene034440.t1 MTR_2g086690 88.976 254 23 4 1 254 1 249 2.14e-164 455
MS.gene034440.t1 MTR_4g052620 60.526 266 86 8 1 253 1 260 8.41e-105 304
MS.gene034440.t1 MTR_7g105170 47.348 264 117 6 1 254 1 252 1.53e-78 238
MS.gene034440.t1 MTR_4g134460 44.099 161 75 4 6 164 56 203 1.31e-37 137
MS.gene034440.t1 MTR_6g011860 41.954 174 87 6 1 167 12 178 2.83e-37 135
MS.gene034440.t1 MTR_4g075980 42.529 174 80 6 6 175 17 174 3.58e-37 133
MS.gene034440.t1 MTR_6g477900 36.275 204 118 5 5 206 7 200 3.01e-36 129
MS.gene034440.t1 MTR_8g059170 46.795 156 75 5 5 160 15 162 3.49e-36 131
MS.gene034440.t1 MTR_5g041940 45.223 157 78 5 5 160 4 153 4.77e-36 129
MS.gene034440.t1 MTR_5g021710 42.246 187 93 7 5 188 9 183 1.65e-35 129
MS.gene034440.t1 MTR_1g096430 44.654 159 73 7 5 160 8 154 1.83e-35 129
MS.gene034440.t1 MTR_5g076850 36.087 230 122 7 5 226 7 219 2.46e-35 133
MS.gene034440.t1 MTR_5g014300 46.012 163 68 7 5 159 7 157 3.75e-35 128
MS.gene034440.t1 MTR_2g079990 45.570 158 72 5 5 160 17 162 4.43e-35 129
MS.gene034440.t1 MTR_4g081870 42.675 157 82 4 5 160 10 159 9.21e-35 125
MS.gene034440.t1 MTR_2g062730 45.926 135 62 4 5 135 11 138 9.31e-35 127
MS.gene034440.t1 MTR_4g098630 35.945 217 118 7 5 209 7 214 2.39e-34 125
MS.gene034440.t1 MTR_2g064090 44.937 158 76 7 5 160 7 155 3.13e-34 126
MS.gene034440.t1 MTR_8g076110 50.000 134 57 6 5 135 7 133 3.36e-34 125
MS.gene034440.t1 MTR_8g024480 36.538 208 107 9 5 199 16 211 6.51e-34 127
MS.gene034440.t1 MTR_3g064580 42.405 158 80 5 5 160 7 155 8.26e-34 129
MS.gene034440.t1 MTR_5g040420 34.703 219 119 9 6 213 16 221 1.05e-33 125
MS.gene034440.t1 MTR_4g035590 42.424 165 79 7 5 166 9 160 1.53e-33 124
MS.gene034440.t1 MTR_3g070030 47.328 131 62 4 5 135 20 143 1.88e-33 124
MS.gene034440.t1 MTR_4g036030 46.269 134 62 5 5 135 8 134 3.09e-33 123
MS.gene034440.t1 MTR_3g116070 47.586 145 65 5 5 145 24 161 3.12e-33 124
MS.gene034440.t1 MTR_2g086880 48.062 129 61 4 6 134 20 142 3.14e-33 127
MS.gene034440.t1 MTR_2g079990 47.826 138 61 4 5 140 17 145 3.28e-33 124
MS.gene034440.t1 MTR_2g086880 48.062 129 61 4 6 134 20 142 3.50e-33 126
MS.gene034440.t1 MTR_1g069805 43.038 158 74 6 5 160 11 154 8.34e-33 120
MS.gene034440.t1 MTR_8g094580 40.341 176 85 7 5 173 8 170 1.55e-32 120
MS.gene034440.t1 MTR_8g467490 39.634 164 82 5 6 160 16 171 1.73e-32 122
MS.gene034440.t1 MTR_2157s0010 43.529 170 78 6 5 164 9 170 2.81e-32 119
MS.gene034440.t1 MTR_4g108760 37.975 158 90 4 3 160 16 165 4.13e-32 120
MS.gene034440.t1 MTR_5g012080 46.269 134 63 5 5 135 8 135 4.41e-32 120
MS.gene034440.t1 MTR_3g096920 41.317 167 88 5 5 170 8 165 4.65e-32 119
MS.gene034440.t1 MTR_1g008740 43.478 138 66 4 2 135 11 140 5.29e-32 120
MS.gene034440.t1 MTR_1g008740 43.478 138 66 4 2 135 25 154 5.46e-32 120
MS.gene034440.t1 MTR_3g088110 41.899 179 90 6 5 180 8 175 5.67e-32 119
MS.gene034440.t1 MTR_7g085220 38.922 167 83 5 5 160 9 167 5.95e-32 120
MS.gene034440.t1 MTR_3g109340 41.818 165 84 6 2 165 20 173 6.05e-32 120
MS.gene034440.t1 MTR_2g078700 44.697 132 66 3 5 135 24 149 6.43e-32 120
MS.gene034440.t1 MTR_2g064470 42.949 156 78 6 5 160 12 156 7.81e-32 119
MS.gene034440.t1 MTR_3g109340 41.818 165 85 6 2 165 20 174 9.13e-32 120
MS.gene034440.t1 MTR_7g097090 42.038 157 77 5 5 160 11 154 1.17e-31 118
MS.gene034440.t1 MTR_4g089135 40.761 184 78 7 5 165 16 191 1.34e-31 119
MS.gene034440.t1 MTR_3g435150 40.252 159 81 5 5 160 17 164 2.03e-31 118
MS.gene034440.t1 MTR_4g101680 41.509 159 78 7 5 160 8 154 2.51e-31 119
MS.gene034440.t1 MTR_6g084430 40.252 159 83 6 2 160 3 149 3.64e-31 117
MS.gene034440.t1 MTR_2g093810 32.031 256 145 8 5 242 15 259 3.69e-31 117
MS.gene034440.t1 MTR_6g012670 38.824 170 96 4 5 174 21 182 4.43e-31 117
MS.gene034440.t1 MTR_3g093040 40.764 157 83 6 5 160 109 256 7.68e-31 116
MS.gene034440.t1 MTR_7g005280 42.138 159 75 6 5 161 16 159 1.74e-30 114
MS.gene034440.t1 MTR_7g011120 44.615 130 65 4 6 135 10 132 1.97e-30 115
MS.gene034440.t1 MTR_3g096140 40.252 159 87 6 6 164 9 159 2.32e-30 114
MS.gene034440.t1 MTR_5g069030 41.667 156 83 5 5 160 26 173 5.17e-30 118
MS.gene034440.t1 MTR_2g080010 37.755 196 95 8 5 187 16 197 7.21e-30 115
MS.gene034440.t1 MTR_3g096140 40.252 159 87 6 6 164 9 159 1.11e-29 114
MS.gene034440.t1 MTR_7g100990 40.000 165 87 5 5 165 12 168 1.47e-29 113
MS.gene034440.t1 MTR_6g032770 41.791 134 71 3 3 135 17 144 2.28e-29 114
MS.gene034440.t1 MTR_3g096920 45.038 131 64 3 5 135 8 130 2.68e-29 112
MS.gene034440.t1 MTR_2g068880 39.037 187 95 8 2 174 19 200 2.81e-29 112
MS.gene034440.t1 MTR_8g099750 41.250 160 83 4 5 161 15 166 2.88e-29 110
MS.gene034440.t1 MTR_7g011130 44.961 129 64 4 7 135 22 143 4.62e-29 112
MS.gene034440.t1 MTR_3g093050 40.385 156 85 5 5 160 23 170 5.30e-29 115
MS.gene034440.t1 MTR_8g023840 41.139 158 80 5 3 159 10 155 5.38e-29 113
MS.gene034440.t1 MTR_3g093050 40.385 156 85 5 5 160 23 170 7.68e-29 114
MS.gene034440.t1 MTR_8g063550 38.365 159 90 6 6 164 8 158 9.94e-29 113
MS.gene034440.t1 MTR_8g063550 38.365 159 90 6 6 164 8 158 1.34e-28 111
MS.gene034440.t1 MTR_8g063550 38.710 155 87 6 6 160 8 154 1.55e-28 112
MS.gene034440.t1 MTR_1g090720 38.608 158 89 4 6 160 44 196 1.56e-28 113
MS.gene034440.t1 MTR_0036s0150 36.875 160 93 4 6 165 7 158 2.43e-28 113
MS.gene034440.t1 MTR_7g085260 36.646 161 92 4 3 160 16 169 2.79e-28 111
MS.gene034440.t1 MTR_1g097300 45.185 135 69 4 4 138 19 148 4.89e-28 112
MS.gene034440.t1 MTR_5g090970 38.415 164 84 5 6 160 20 175 8.29e-28 108
MS.gene034440.t1 MTR_3g098810 40.123 162 83 4 5 160 15 168 1.34e-27 106
MS.gene034440.t1 MTR_8g023860 37.500 160 87 5 1 159 9 156 1.84e-27 109
MS.gene034440.t1 MTR_2g068920 38.235 170 88 6 2 159 18 182 3.06e-27 106
MS.gene034440.t1 MTR_5g090970 37.576 165 85 5 6 160 20 176 4.25e-27 106
MS.gene034440.t1 MTR_1g090723 37.500 160 93 5 6 165 10 162 4.57e-27 109
MS.gene034440.t1 MTR_1g090723 36.875 160 93 5 6 165 10 161 4.69e-27 109
MS.gene034440.t1 MTR_1g090723 36.875 160 93 5 6 165 10 161 4.83e-27 109
MS.gene034440.t1 MTR_8g093580 37.107 159 92 6 6 164 8 158 6.85e-27 108
MS.gene034440.t1 MTR_3g098810 44.118 136 65 3 5 137 15 142 1.46e-26 102
MS.gene034440.t1 MTR_8g023900 37.821 156 86 5 5 159 13 158 6.88e-26 105
MS.gene034440.t1 MTR_8g023900 39.610 154 80 5 7 159 196 337 3.15e-25 103
MS.gene034440.t1 MTR_3g070040 43.411 129 61 4 8 135 12 129 8.58e-26 103
MS.gene034440.t1 MTR_8g023930 38.462 156 83 5 5 159 25 168 5.60e-24 100
MS.gene034440.t1 MTR_4g094302 41.353 133 61 5 5 135 12 129 1.12e-22 92.0
MS.gene034440.t1 MTR_4g094302 41.353 133 61 5 5 135 12 129 1.48e-22 90.9
MS.gene034440.t1 MTR_3g096140 37.241 145 83 6 20 164 2 138 4.02e-22 93.6
MS.gene034440.t1 MTR_8g023880 35.088 171 78 8 5 159 8 161 6.20e-22 92.0
MS.gene034440.t1 MTR_8g094580 41.964 112 61 3 64 173 7 116 6.39e-22 91.3
MS.gene034440.t1 MTR_7g070140 40.659 91 48 3 61 149 14 100 9.84e-15 69.7
MS.gene034440.t1 MTR_7g083360 31.034 145 93 3 3 147 9 146 1.50e-14 69.7
MS.gene034440.t1 MTR_3g096400 29.697 165 98 5 5 162 8 161 5.51e-14 69.3
MS.gene034440.t1 MTR_8g093790 31.410 156 77 7 5 160 11 136 4.30e-13 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene034440.t1 AT5G22380 54.400 250 88 5 7 253 8 234 4.25e-86 256
MS.gene034440.t1 AT3G44350 51.587 252 108 5 2 253 3 240 7.60e-84 251
MS.gene034440.t1 AT3G44350 57.500 160 65 2 2 161 3 159 5.73e-62 192
MS.gene034440.t1 AT4G17980 46.835 158 74 6 5 159 7 157 6.50e-39 136
MS.gene034440.t1 AT4G17980 46.835 158 74 6 5 159 7 157 8.91e-39 137
MS.gene034440.t1 AT2G02450 43.949 157 73 4 6 160 53 196 3.65e-38 137
MS.gene034440.t1 AT2G02450 43.949 157 73 4 6 160 53 196 6.39e-38 137
MS.gene034440.t1 AT2G17040 42.105 171 79 6 6 172 8 162 1.12e-37 133
MS.gene034440.t1 AT3G15500 47.468 158 69 6 5 160 15 160 6.02e-37 132
MS.gene034440.t1 AT3G17730 38.144 194 102 6 5 196 7 184 6.91e-37 130
MS.gene034440.t1 AT5G66300 46.541 159 71 7 5 160 13 160 1.67e-36 131
MS.gene034440.t1 AT5G46590 43.949 157 78 5 5 159 7 155 1.23e-35 129
MS.gene034440.t1 AT1G52890 45.570 158 72 5 5 160 15 160 1.44e-35 129
MS.gene034440.t1 AT4G10350 41.753 194 93 9 5 192 10 189 2.30e-35 129
MS.gene034440.t1 AT3G12910 42.169 166 80 5 6 160 23 183 4.41e-35 127
MS.gene034440.t1 AT1G69490 41.975 162 86 4 5 165 10 164 6.14e-35 126
MS.gene034440.t1 AT4G27410 44.937 158 73 7 5 160 15 160 7.36e-35 127
MS.gene034440.t1 AT1G32510 43.558 163 76 6 5 159 7 161 8.14e-35 126
MS.gene034440.t1 AT4G36160 42.286 175 77 7 5 176 11 164 8.76e-35 128
MS.gene034440.t1 AT4G36160 42.286 175 77 7 5 176 11 164 8.76e-35 128
MS.gene034440.t1 AT4G36160 42.286 175 77 7 5 176 15 168 9.09e-35 128
MS.gene034440.t1 AT2G24430 40.625 160 84 4 2 160 14 163 1.41e-34 126
MS.gene034440.t1 AT2G24430 40.625 160 84 4 2 160 14 163 1.41e-34 126
MS.gene034440.t1 AT2G18060 45.283 159 72 7 5 160 10 156 1.50e-34 127
MS.gene034440.t1 AT2G18060 45.283 159 72 7 5 160 10 156 1.50e-34 127
MS.gene034440.t1 AT4G27410 42.604 169 78 7 5 160 15 177 2.59e-34 125
MS.gene034440.t1 AT5G61430 41.139 158 85 4 3 160 15 164 3.48e-34 126
MS.gene034440.t1 AT4G35580 43.750 160 82 6 1 160 6 157 3.60e-34 129
MS.gene034440.t1 AT4G35580 43.750 160 82 6 1 160 6 157 3.71e-34 129
MS.gene034440.t1 AT4G35580 43.750 160 82 6 1 160 6 157 3.82e-34 129
MS.gene034440.t1 AT5G17260 43.671 158 78 5 5 160 7 155 3.92e-34 128
MS.gene034440.t1 AT3G49530 41.250 160 87 5 1 160 10 162 4.20e-34 127
MS.gene034440.t1 AT5G46590 44.079 152 75 5 5 154 7 150 5.94e-34 124
MS.gene034440.t1 AT1G65910 43.590 156 80 4 5 160 7 154 6.55e-34 129
MS.gene034440.t1 AT3G49530 41.250 160 87 5 1 160 10 162 7.75e-34 127
MS.gene034440.t1 AT5G24590 45.522 134 69 2 5 138 14 143 1.26e-33 126
MS.gene034440.t1 AT1G33060 42.500 160 84 5 1 160 21 172 1.29e-33 128
MS.gene034440.t1 AT1G33060 42.500 160 84 5 1 160 21 172 1.40e-33 128
MS.gene034440.t1 AT3G61910 36.744 215 108 8 5 198 12 219 1.85e-33 124
MS.gene034440.t1 AT1G71930 48.507 134 59 5 5 135 10 136 2.60e-33 123
MS.gene034440.t1 AT1G71930 48.507 134 59 5 5 135 10 136 2.60e-33 123
MS.gene034440.t1 AT1G79580 45.926 135 62 4 5 135 18 145 4.34e-33 124
MS.gene034440.t1 AT1G79580 45.926 135 62 4 5 135 18 145 4.34e-33 124
MS.gene034440.t1 AT1G79580 45.926 135 62 4 5 135 18 145 4.34e-33 124
MS.gene034440.t1 AT1G79580 45.926 135 62 4 5 135 18 145 4.34e-33 124
MS.gene034440.t1 AT1G79580 45.926 135 62 4 5 135 18 145 4.34e-33 124
MS.gene034440.t1 AT1G76420 42.073 164 78 6 5 164 23 173 4.54e-33 123
MS.gene034440.t1 AT1G61110 41.916 167 78 5 5 160 17 175 4.88e-33 122
MS.gene034440.t1 AT3G18400 43.210 162 75 7 2 160 3 150 8.77e-33 122
MS.gene034440.t1 AT5G07680 39.241 158 88 4 3 160 2 151 1.88e-32 120
MS.gene034440.t1 AT5G07680 39.241 158 88 4 3 160 16 165 2.20e-32 121
MS.gene034440.t1 AT1G56010 41.667 156 85 4 5 160 20 169 3.79e-32 120
MS.gene034440.t1 AT5G62380 38.608 158 84 5 5 160 8 154 4.36e-32 120
MS.gene034440.t1 AT5G62380 38.608 158 84 5 5 160 8 154 4.36e-32 120
MS.gene034440.t1 AT1G26870 45.714 140 62 6 1 135 12 142 4.48e-32 122
MS.gene034440.t1 AT1G01720 42.683 164 81 5 5 165 8 161 5.18e-32 119
MS.gene034440.t1 AT5G08790 36.279 215 105 8 5 197 8 212 5.40e-32 119
MS.gene034440.t1 AT1G33280 45.714 140 66 5 5 141 9 141 8.18e-32 119
MS.gene034440.t1 AT3G04070 40.678 177 86 6 5 170 11 179 1.22e-31 119
MS.gene034440.t1 AT3G15170 39.024 164 92 4 5 167 21 177 1.50e-31 118
MS.gene034440.t1 AT2G46770 40.828 169 80 8 5 160 17 178 1.50e-31 119
MS.gene034440.t1 AT1G54330 42.949 156 78 5 5 160 7 151 1.61e-31 118
MS.gene034440.t1 AT3G10490 38.854 157 85 5 6 160 29 176 1.99e-31 116
MS.gene034440.t1 AT1G77450 37.500 208 106 8 5 207 11 199 2.01e-31 116
MS.gene034440.t1 AT1G32770 47.015 134 61 6 5 135 17 143 2.51e-31 119
MS.gene034440.t1 AT5G63790 35.945 217 116 8 5 216 51 249 2.68e-31 117
MS.gene034440.t1 AT5G18270 37.500 160 93 3 1 160 18 170 2.77e-31 118
MS.gene034440.t1 AT5G63790 35.945 217 116 8 5 216 61 259 3.72e-31 117
MS.gene034440.t1 AT3G03200 41.401 157 83 5 5 160 7 155 5.05e-31 120
MS.gene034440.t1 AT3G12977 38.462 156 87 4 5 160 19 165 6.68e-31 116
MS.gene034440.t1 AT3G04060 37.975 158 91 3 3 160 19 169 7.02e-31 117
MS.gene034440.t1 AT5G18270 36.875 160 94 3 1 160 18 170 7.78e-31 117
MS.gene034440.t1 AT3G10480 39.490 157 84 5 6 160 29 176 7.97e-31 119
MS.gene034440.t1 AT1G12260 45.522 134 63 5 5 135 8 134 8.44e-31 117
MS.gene034440.t1 AT2G43000 39.490 157 82 5 6 160 20 165 1.05e-30 115
MS.gene034440.t1 AT1G12260 45.522 134 63 5 5 135 8 134 1.34e-30 117
MS.gene034440.t1 AT3G04070 42.568 148 71 4 5 146 11 150 1.87e-30 116
MS.gene034440.t1 AT5G39610 38.608 158 89 4 3 160 19 168 4.96e-30 114
MS.gene034440.t1 AT3G10480 38.854 157 84 5 6 160 29 175 5.92e-30 116
MS.gene034440.t1 AT5G39820 41.379 145 76 5 6 148 22 159 5.99e-30 114
MS.gene034440.t1 AT3G10490 38.854 157 85 5 6 160 29 176 1.14e-29 115
MS.gene034440.t1 AT1G62700 44.776 134 64 5 5 135 8 134 1.25e-29 115
MS.gene034440.t1 AT1G62700 44.776 134 64 5 5 135 8 134 1.25e-29 115
MS.gene034440.t1 AT3G29035 37.975 158 90 4 3 160 23 172 1.64e-29 113
MS.gene034440.t1 AT5G53950 44.361 133 65 4 5 135 18 143 2.45e-29 114
MS.gene034440.t1 AT2G33480 39.873 158 78 5 5 161 16 157 5.01e-29 110
MS.gene034440.t1 AT1G34190 39.506 162 90 5 4 165 16 169 1.20e-28 114
MS.gene034440.t1 AT3G15510 40.964 166 75 7 8 160 21 176 1.22e-28 112
MS.gene034440.t1 AT3G44290 43.939 132 68 4 6 137 16 141 1.80e-28 108
MS.gene034440.t1 AT3G10500 37.500 160 92 5 6 165 11 162 1.90e-28 113
MS.gene034440.t1 AT2G33480 39.506 162 75 6 5 161 16 159 4.04e-28 108
MS.gene034440.t1 AT3G44290 43.182 132 69 4 6 137 16 141 4.63e-28 109
MS.gene034440.t1 AT1G34180 44.444 135 70 5 4 138 16 145 5.31e-28 111
MS.gene034440.t1 AT2G27300 42.308 130 67 4 6 134 16 138 7.91e-28 109
MS.gene034440.t1 AT5G22290 42.636 129 68 4 6 134 23 145 7.97e-28 109
MS.gene034440.t1 AT4G28530 37.427 171 81 5 5 160 11 170 1.00e-27 109
MS.gene034440.t1 AT1G34180 44.444 135 70 5 4 138 16 145 1.12e-27 111
MS.gene034440.t1 AT5G13180 44.361 133 62 4 5 135 15 137 1.14e-27 107
MS.gene034440.t1 AT5G64060 38.125 160 89 6 6 164 8 158 2.11e-27 108
MS.gene034440.t1 AT5G09330 44.615 130 67 4 6 135 8 132 4.13e-27 109
MS.gene034440.t1 AT5G09330 44.615 130 67 4 6 135 8 132 4.13e-27 109
MS.gene034440.t1 AT5G09330 44.615 130 67 4 6 135 8 132 4.13e-27 109
MS.gene034440.t1 AT5G09330 44.615 130 67 4 6 135 8 132 4.13e-27 109
MS.gene034440.t1 AT5G09330 44.615 130 67 4 6 135 8 132 4.13e-27 109
MS.gene034440.t1 AT5G04410 38.125 160 91 6 6 165 11 162 6.91e-27 108
MS.gene034440.t1 AT1G34180 40.690 145 73 5 4 138 16 157 2.98e-26 106
MS.gene034440.t1 AT1G34180 40.690 145 73 5 4 138 16 157 6.78e-26 106
MS.gene034440.t1 AT3G04420 33.121 157 94 3 3 159 2 147 5.83e-25 100
MS.gene034440.t1 AT3G10480 32.979 188 86 6 6 160 29 209 5.87e-25 103
MS.gene034440.t1 AT3G04420 33.121 157 94 3 3 159 2 147 1.87e-24 100
MS.gene034440.t1 AT4G01550 40.769 130 72 3 7 134 7 133 4.08e-23 97.8
MS.gene034440.t1 AT1G52880 38.596 171 87 5 8 168 21 183 2.04e-22 94.4
MS.gene034440.t1 AT5G04395 34.965 143 76 5 5 134 29 167 2.01e-21 89.0
MS.gene034440.t1 AT1G32870 36.875 160 93 5 6 165 12 163 3.40e-21 92.8
MS.gene034440.t1 AT1G32870 36.875 160 93 5 6 165 12 163 3.68e-21 92.4
MS.gene034440.t1 AT1G32870 36.875 160 93 5 6 165 48 199 5.52e-21 92.0
MS.gene034440.t1 AT4G10350 40.690 145 72 7 54 192 6 142 7.37e-21 89.7
MS.gene034440.t1 AT4G01520 36.765 136 82 2 1 134 1 134 1.00e-20 89.4
MS.gene034440.t1 AT1G56010 42.268 97 55 1 64 160 7 102 3.78e-20 87.0
MS.gene034440.t1 AT4G01540 35.897 156 86 5 7 159 7 151 4.66e-20 89.0
MS.gene034440.t1 AT4G01540 39.695 131 73 4 7 134 7 134 5.04e-20 89.0
MS.gene034440.t1 AT1G02230 36.567 134 78 3 5 136 4 132 5.09e-20 88.2
MS.gene034440.t1 AT4G01540 39.695 131 73 4 7 134 7 134 5.78e-20 89.0
MS.gene034440.t1 AT4G01540 35.897 156 86 5 7 159 7 151 6.06e-20 88.2
MS.gene034440.t1 AT3G12977 40.385 104 59 2 57 160 12 112 6.44e-20 85.9
MS.gene034440.t1 AT5G64530 39.394 132 59 7 5 134 4 116 7.37e-20 84.0
MS.gene034440.t1 AT5G64530 37.879 132 61 6 5 134 4 116 1.02e-19 84.3
MS.gene034440.t1 AT5G61430 41.237 97 55 2 64 160 7 101 2.08e-19 85.5
MS.gene034440.t1 AT1G02250 31.210 157 94 4 5 159 4 148 2.63e-18 83.6
MS.gene034440.t1 AT1G01010 35.461 141 79 4 1 134 1 136 3.15e-18 83.6
MS.gene034440.t1 AT1G02220 32.576 132 83 3 3 134 2 127 1.24e-16 79.0
MS.gene034440.t1 AT2G33480 39.216 102 57 3 61 161 5 102 6.96e-16 74.3
MS.gene034440.t1 AT3G56530 30.573 157 100 5 5 161 53 200 7.96e-16 75.9
MS.gene034440.t1 AT4G28530 36.364 110 52 2 5 100 11 116 1.69e-14 72.4
MS.gene034440.t1 AT2G43000 42.500 80 43 2 81 160 11 87 4.74e-14 69.3
MS.gene034440.t1 AT5G50820 29.814 161 96 5 5 162 18 164 9.43e-14 68.2
MS.gene034440.t1 AT5G14000 30.570 193 114 7 5 193 16 192 5.89e-13 66.2
MS.gene034440.t1 AT3G55210 26.786 168 101 5 5 161 12 168 1.24e-12 66.6
MS.gene034440.t1 AT2G18060 43.836 73 35 2 88 160 2 68 2.29e-12 65.9
MS.gene034440.t1 AT3G10490 41.026 78 43 2 83 160 2 76 4.23e-12 65.5
MS.gene034440.t1 AT3G10490 41.026 78 43 2 83 160 2 76 4.23e-12 65.5

Find 75 sgRNAs with CRISPR-Local

Find 138 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTCTAACAACAAAGTTAT+TGG 0.141170 2.3:-12309726 MS.gene034440:CDS
GGGAATGGGAACAACTAAAT+TGG 0.237761 2.3:-12308853 MS.gene034440:CDS
GGTTCATCAACCCCATTATT+TGG 0.243110 2.3:+12308890 None:intergenic
TGGAATGATGTACCAAATAA+TGG 0.268563 2.3:-12308902 MS.gene034440:CDS
TGCTTGTAATCAGCATTTGC+AGG 0.308629 2.3:-12309885 MS.gene034440:intron
ACAACAAAGTTATTGGAATA+AGG 0.320903 2.3:-12309719 MS.gene034440:CDS
ATGAACCTGACGAGCCTCTT+TGG 0.329425 2.3:-12308874 MS.gene034440:CDS
TCAAGTTGTAACTCCGTCTT+TGG 0.337961 2.3:+12309061 None:intergenic
CCTGATGCTGCTCTTAATAT+TGG 0.341714 2.3:-12308944 MS.gene034440:CDS
GGAATGATGTACCAAATAAT+GGG 0.347934 2.3:-12308901 MS.gene034440:CDS
TGAACCTGACGAGCCTCTTT+GGG 0.365510 2.3:-12308873 MS.gene034440:CDS
CCACAAGATGTTGTTCTGTT+TGG 0.369650 2.3:+12309786 None:intergenic
CATCTGGAAGGAAAACAAAA+TGG 0.371311 2.3:-12309665 MS.gene034440:CDS
GAACAACATCTTGTGGGTAT+TGG 0.373317 2.3:-12309779 MS.gene034440:CDS
TCCGTCTTTGGCCCCTCTAA+TGG 0.374360 2.3:+12309073 None:intergenic
GTGTCGCGTTTATGTGATAT+CGG 0.388670 2.3:-12309122 MS.gene034440:CDS
CATTCCCAAAGAGGCTCGTC+AGG 0.403826 2.3:+12308869 None:intergenic
CCAATATTAAGAGCAGCATC+AGG 0.411283 2.3:+12308944 None:intergenic
CTCAACTCTCTCTCTTGTCT+TGG 0.417219 2.3:+12309819 None:intergenic
GAGGGTCAAGTGGCACGAAT+TGG 0.422284 2.3:-12308922 MS.gene034440:CDS
TACCTTAGGAGGGTTTGTAT+TGG 0.427109 2.3:+12309602 None:intergenic
ATTTGATCGAAGACCATTAG+AGG 0.450948 2.3:-12309086 MS.gene034440:CDS
TACATAGGAAAAGCTCCATC+TGG 0.458200 2.3:-12309681 MS.gene034440:CDS
TGACGAGCCTCTTTGGGAAT+GGG 0.462600 2.3:-12308867 MS.gene034440:CDS
TTAGGAGGGTTTGTATTGGA+TGG 0.467242 2.3:+12309606 None:intergenic
CTGACGAGCCTCTTTGGGAA+TGG 0.476253 2.3:-12308868 MS.gene034440:CDS
GGATGGATCAGATGGTTCAA+TGG 0.492070 2.3:+12309623 None:intergenic
TTGTGGGTATTGGAAAGCTA+CGG 0.496227 2.3:-12309769 MS.gene034440:CDS
ATACCTGTCATTGATATCAA+TGG 0.504577 2.3:-12310711 MS.gene034440:CDS
AATTGTGTTACGTACTTGGA+AGG 0.510602 2.3:+12310673 None:intergenic
TACGTACTTGGAAGGTTCCA+TGG 0.519792 2.3:+12310681 None:intergenic
TGTCGCGTTTATGTGATATC+GGG 0.520469 2.3:-12309121 MS.gene034440:CDS
GATGCTGCTCTTAATATTGG+AGG 0.523753 2.3:-12308941 MS.gene034440:CDS
AGTTGTTCCCATTCCCAAAG+AGG 0.523806 2.3:+12308860 None:intergenic
TTAGAAGAGTAAACGTAGCT+AGG 0.528675 2.3:+12309741 None:intergenic
CCTACAGAAGAAGAGCTAGT+TGG 0.532376 2.3:-12310789 MS.gene034440:CDS
TGTGGGTATTGGAAAGCTAC+GGG 0.533051 2.3:-12309768 MS.gene034440:CDS
TTTGTATTGGATGGATCAGA+TGG 0.533121 2.3:+12309615 None:intergenic
ACTTCCCACTCGGGAGAGGT+AGG 0.537886 2.3:-12308974 MS.gene034440:CDS
CAAGAGAGAGAGTTGAGAGG+TGG 0.538126 2.3:-12309813 MS.gene034440:CDS
AATATGGAGGATTCCCCACC+TGG 0.538171 2.3:-12310825 MS.gene034440:CDS
GCTTGTAATCAGCATTTGCA+GGG 0.540324 2.3:-12309884 MS.gene034440:intron
ATCAACTTCCCACTCGGGAG+AGG 0.543167 2.3:-12308978 MS.gene034440:CDS
CTTAATATTGGAGGGTCAAG+TGG 0.545128 2.3:-12308932 MS.gene034440:CDS
ATCCAATACAAACCCTCCTA+AGG 0.551696 2.3:-12309604 MS.gene034440:intron
CCAACTAGCTCTTCTTCTGT+AGG 0.552564 2.3:+12310789 None:intergenic
ACCATTAGAGGGGCCAAAGA+CGG 0.556738 2.3:-12309074 MS.gene034440:CDS
TTGCCATTGATATCAATGAC+AGG 0.570032 2.3:+12310708 None:intergenic
AAACTTATCAACTTCCCACT+CGG 0.573290 2.3:-12308984 MS.gene034440:CDS
ATATCAATGGCAAAGAGCCA+TGG 0.579611 2.3:-12310698 MS.gene034440:CDS
CAAACAGAACAACATCTTGT+GGG 0.582806 2.3:-12309785 MS.gene034440:CDS
CTTCTATCTACACAACCAGC+TGG 0.586767 2.3:-12310766 MS.gene034440:CDS
AACTTATCAACTTCCCACTC+GGG 0.587994 2.3:-12308983 MS.gene034440:CDS
CTTCCCACTCGGGAGAGGTA+GGG 0.590713 2.3:-12308973 MS.gene034440:CDS
TTTGATCGAAGACCATTAGA+GGG 0.593675 2.3:-12309085 MS.gene034440:CDS
TCTCCCTACCTCTCCCGAGT+GGG 0.595426 2.3:+12308970 None:intergenic
ATGCTGCTCTTAATATTGGA+GGG 0.598605 2.3:-12308940 MS.gene034440:CDS
CTCTCCCTACCTCTCCCGAG+TGG 0.598952 2.3:+12308969 None:intergenic
CCAAACAGAACAACATCTTG+TGG 0.599917 2.3:-12309786 MS.gene034440:CDS
TAGGAAAAGCTCCATCTGGA+AGG 0.600654 2.3:-12309677 MS.gene034440:CDS
AACAAGTGCTCATCAACAAG+TGG 0.605093 2.3:-12309026 MS.gene034440:CDS
GTCGTGGAGACACAGAGCAA+TGG 0.605650 2.3:-12309854 MS.gene034440:CDS
CAATATTAAGAGCAGCATCA+GGG 0.618904 2.3:+12308945 None:intergenic
TATCTACACAACCAGCTGGA+AGG 0.633344 2.3:-12310762 MS.gene034440:CDS
TTTGCAGGGGAGAGATGTCG+TGG 0.639193 2.3:-12309870 MS.gene034440:CDS
ATAGAAACGAAAACCAGGTG+GGG 0.644775 2.3:+12310812 None:intergenic
GATAGAAACGAAAACCAGGT+GGG 0.647890 2.3:+12310811 None:intergenic
GTAGGATAGAAACGAAAACC+AGG 0.654759 2.3:+12310807 None:intergenic
CTTGTAATCAGCATTTGCAG+GGG 0.662090 2.3:-12309883 MS.gene034440:intron
AGACAAGAGAGAGAGTTGAG+AGG 0.669671 2.3:-12309816 MS.gene034440:CDS
TATTGGAATAAGGAAAACCA+TGG 0.672753 2.3:-12309709 MS.gene034440:CDS
TTGATCGAAGACCATTAGAG+GGG 0.685119 2.3:-12309084 MS.gene034440:CDS
GGATAGAAACGAAAACCAGG+TGG 0.690089 2.3:+12310810 None:intergenic
CAAGTGGTAGCAGAGCTCGA+TGG 0.690454 2.3:-12309010 MS.gene034440:CDS
GAATGATGTACCAAATAATG+GGG 0.703827 2.3:-12308900 MS.gene034440:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTGATCAATAATTTATTT+TGG - chr2.3:12310494-12310513 MS.gene034440:intron 10.0%
!!! ATCTTTTTTTTTTTTTTTGA+GGG - chr2.3:12309213-12309232 MS.gene034440:intron 10.0%
!!! TATCTTTTTTTTTTTTTTTG+AGG - chr2.3:12309212-12309231 MS.gene034440:intron 10.0%
!! AAAAAATAAGTACGAAATTT+GGG - chr2.3:12309506-12309525 MS.gene034440:intron 15.0%
!!! AAAAACTAAGCAATTTTTTT+AGG + chr2.3:12309562-12309581 None:intergenic 15.0%
!!! AAAACTAAGCAATTTTTTTA+GGG + chr2.3:12309561-12309580 None:intergenic 15.0%
!!! AAATTTCGTACTTATTTTTT+GGG + chr2.3:12309506-12309525 None:intergenic 15.0%
!!! TTATGATAAATATTTTAAGG+TGG + chr2.3:12310245-12310264 None:intergenic 15.0%
!! AAAATCACTAGATTAAGTAA+CGG + chr2.3:12309173-12309192 None:intergenic 20.0%
!! ATAAACCCCTAAAAAAAAAT+TGG + chr2.3:12309534-12309553 None:intergenic 20.0%
!! CAAAAAATAAGTACGAAATT+TGG - chr2.3:12309505-12309524 MS.gene034440:intron 20.0%
!! TAAACCCCTAAAAAAAAATT+GGG + chr2.3:12309533-12309552 None:intergenic 20.0%
!!! AATTTCGTACTTATTTTTTG+GGG + chr2.3:12309505-12309524 None:intergenic 20.0%
!!! ATATACAATAAATTTTGACG+CGG - chr2.3:12310396-12310415 MS.gene034440:intron 20.0%
!!! CAAATTTCGTACTTATTTTT+TGG + chr2.3:12309507-12309526 None:intergenic 20.0%
!!! TACTTTTTCAAATATACCTT+AGG + chr2.3:12310084-12310103 None:intergenic 20.0%
!!! TGAGATAATTTTTTTCTTCA+TGG + chr2.3:12309143-12309162 None:intergenic 20.0%
!!! TTTTTTTTTAGGGGTTTATT+AGG - chr2.3:12309535-12309554 MS.gene034440:intron 20.0%
! AAAAAATTGTGTTACGTACT+TGG + chr2.3:12309003-12309022 None:intergenic 25.0%
! AAACCCCTAAAAAAAAATTG+GGG + chr2.3:12309532-12309551 None:intergenic 25.0%
! AAATCACTAGATTAAGTAAC+GGG + chr2.3:12309172-12309191 None:intergenic 25.0%
! ACAACAAAGTTATTGGAATA+AGG - chr2.3:12309950-12309969 MS.gene034440:intron 25.0%
! ATGATATTATACCACATGTA+GGG - chr2.3:12309440-12309459 MS.gene034440:intron 25.0%
! GAAAATATCTACATGAATGA+CGG + chr2.3:12309419-12309438 None:intergenic 25.0%
! GACATATTATTTGAGAATCA+CGG + chr2.3:12310204-12310223 None:intergenic 25.0%
! GTCAATCTTAGACATATTTA+GGG + chr2.3:12309395-12309414 None:intergenic 25.0%
! TATGATATTATACCACATGT+AGG - chr2.3:12309439-12309458 MS.gene034440:intron 25.0%
! TCTTCTAACAACAAAGTTAT+TGG - chr2.3:12309943-12309962 MS.gene034440:intron 25.0%
! TGTCAATCTTAGACATATTT+AGG + chr2.3:12309396-12309415 None:intergenic 25.0%
!! TTTTCAAATATACCTTAGGA+GGG + chr2.3:12310080-12310099 None:intergenic 25.0%
!!! TTTTTCAAATATACCTTAGG+AGG + chr2.3:12310081-12310100 None:intergenic 25.0%
ATACCTGTCATTGATATCAA+TGG - chr2.3:12308958-12308977 MS.gene034440:CDS 30.0%
GAATGATGTACCAAATAATG+GGG - chr2.3:12310769-12310788 MS.gene034440:CDS 30.0%
GGAATGATGTACCAAATAAT+GGG - chr2.3:12310768-12310787 MS.gene034440:CDS 30.0%
TATTGGAATAAGGAAAACCA+TGG - chr2.3:12309960-12309979 MS.gene034440:intron 30.0%
TCTATCTATAAGTAGTGTCA+TGG - chr2.3:12309245-12309264 MS.gene034440:intron 30.0%
TGGAATGATGTACCAAATAA+TGG - chr2.3:12310767-12310786 MS.gene034440:CDS 30.0%
TTAGTTAGAACCCAAATTGT+AGG - chr2.3:12309664-12309683 MS.gene034440:CDS 30.0%
! AAAACCATGGTGTTTTACAT+AGG - chr2.3:12309973-12309992 MS.gene034440:intron 30.0%
! TTTTCCTATGTAAAACACCA+TGG + chr2.3:12309980-12309999 None:intergenic 30.0%
!! CTTATTTTTCCCTTCCTTTT+TGG - chr2.3:12310145-12310164 MS.gene034440:intron 30.0%
!!! GTACTTATTTTTTGGGGTAT+AGG + chr2.3:12309499-12309518 None:intergenic 30.0%
!!! TTATTTTTTGGGGTATAGGA+CGG + chr2.3:12309495-12309514 None:intergenic 30.0%
AAACACGATCCAAAAAGGAA+GGG + chr2.3:12310157-12310176 None:intergenic 35.0%
AAACTTATCAACTTCCCACT+CGG - chr2.3:12310685-12310704 MS.gene034440:intron 35.0%
AATTGTGTTACGTACTTGGA+AGG + chr2.3:12308999-12309018 None:intergenic 35.0%
ATGCTGCTCTTAATATTGGA+GGG - chr2.3:12310729-12310748 MS.gene034440:CDS 35.0%
ATTACTCTCACATGTGTTCA+GGG + chr2.3:12309723-12309742 None:intergenic 35.0%
ATTTGATCGAAGACCATTAG+AGG - chr2.3:12310583-12310602 MS.gene034440:intron 35.0%
CAAACAGAACAACATCTTGT+GGG - chr2.3:12309884-12309903 MS.gene034440:intron 35.0%
CAATATTAAGAGCAGCATCA+GGG + chr2.3:12310727-12310746 None:intergenic 35.0%
CACAATCTTGATTGTTGTCA+TGG + chr2.3:12310290-12310309 None:intergenic 35.0%
CATCTGGAAGGAAAACAAAA+TGG - chr2.3:12310004-12310023 MS.gene034440:intron 35.0%
TATTACTCTCACATGTGTTC+AGG + chr2.3:12309724-12309743 None:intergenic 35.0%
TTAGAAGAGTAAACGTAGCT+AGG + chr2.3:12309931-12309950 None:intergenic 35.0%
TTGCCATTGATATCAATGAC+AGG + chr2.3:12308964-12308983 None:intergenic 35.0%
TTTGATCGAAGACCATTAGA+GGG - chr2.3:12310584-12310603 MS.gene034440:intron 35.0%
TTTGTATTGGATGGATCAGA+TGG + chr2.3:12310057-12310076 None:intergenic 35.0%
!!! CATTTTGTTTTCCTTCCAGA+TGG + chr2.3:12310006-12310025 None:intergenic 35.0%
!!! TGGGCCCCAATTTTTTTTTA+GGG - chr2.3:12309525-12309544 MS.gene034440:intron 35.0%
!!! TTGGGCCCCAATTTTTTTTT+AGG - chr2.3:12309524-12309543 MS.gene034440:intron 35.0%
AACAAGTGCTCATCAACAAG+TGG - chr2.3:12310643-12310662 MS.gene034440:intron 40.0%
AACTTATCAACTTCCCACTC+GGG - chr2.3:12310686-12310705 MS.gene034440:intron 40.0%
ACCTCAAACACGATCCAAAA+AGG + chr2.3:12310162-12310181 None:intergenic 40.0%
ATAGAAACGAAAACCAGGTG+GGG + chr2.3:12308860-12308879 None:intergenic 40.0%
ATATCAATGGCAAAGAGCCA+TGG - chr2.3:12308971-12308990 MS.gene034440:CDS 40.0%
ATCCAATACAAACCCTCCTA+AGG - chr2.3:12310065-12310084 MS.gene034440:intron 40.0%
CAAACACGATCCAAAAAGGA+AGG + chr2.3:12310158-12310177 None:intergenic 40.0%
CACATGTAGGGTTGTATATG+AGG - chr2.3:12309452-12309471 MS.gene034440:intron 40.0%
CCAAACAGAACAACATCTTG+TGG - chr2.3:12309883-12309902 MS.gene034440:intron 40.0%
CCAATATTAAGAGCAGCATC+AGG + chr2.3:12310728-12310747 None:intergenic 40.0%
CCACAAGATGTTGTTCTGTT+TGG + chr2.3:12309886-12309905 None:intergenic 40.0%
CCTGATGCTGCTCTTAATAT+TGG - chr2.3:12310725-12310744 MS.gene034440:CDS 40.0%
CTAGGACGAACCTACAATTT+GGG + chr2.3:12309677-12309696 None:intergenic 40.0%
CTCATATACAACCCTACATG+TGG + chr2.3:12309454-12309473 None:intergenic 40.0%
CTTAATATTGGAGGGTCAAG+TGG - chr2.3:12310737-12310756 MS.gene034440:CDS 40.0%
CTTGTAATCAGCATTTGCAG+GGG - chr2.3:12309786-12309805 MS.gene034440:CDS 40.0%
GAACAACATCTTGTGGGTAT+TGG - chr2.3:12309890-12309909 MS.gene034440:intron 40.0%
GATAGAAACGAAAACCAGGT+GGG + chr2.3:12308861-12308880 None:intergenic 40.0%
GATGCTGCTCTTAATATTGG+AGG - chr2.3:12310728-12310747 MS.gene034440:CDS 40.0%
GCTTGTAATCAGCATTTGCA+GGG - chr2.3:12309785-12309804 MS.gene034440:CDS 40.0%
GGGAATGGGAACAACTAAAT+TGG - chr2.3:12310816-12310835 MS.gene034440:CDS 40.0%
GGTTCATCAACCCCATTATT+TGG + chr2.3:12310782-12310801 None:intergenic 40.0%
GTAGGATAGAAACGAAAACC+AGG + chr2.3:12308865-12308884 None:intergenic 40.0%
GTGTCGCGTTTATGTGATAT+CGG - chr2.3:12310547-12310566 MS.gene034440:intron 40.0%
TACATAGGAAAAGCTCCATC+TGG - chr2.3:12309988-12310007 MS.gene034440:intron 40.0%
TACCTTAGGAGGGTTTGTAT+TGG + chr2.3:12310070-12310089 None:intergenic 40.0%
TGCTTGTAATCAGCATTTGC+AGG - chr2.3:12309784-12309803 MS.gene034440:CDS 40.0%
TGTCGCGTTTATGTGATATC+GGG - chr2.3:12310548-12310567 MS.gene034440:intron 40.0%
TTACTCTCACATGTGTTCAG+GGG + chr2.3:12309722-12309741 None:intergenic 40.0%
TTAGGAGGGTTTGTATTGGA+TGG + chr2.3:12310066-12310085 None:intergenic 40.0%
TTGATCGAAGACCATTAGAG+GGG - chr2.3:12310585-12310604 MS.gene034440:intron 40.0%
! ATCGTGTTTGAGGTTTGCAT+CGG - chr2.3:12310168-12310187 MS.gene034440:intron 40.0%
! TCAAGTTGTAACTCCGTCTT+TGG + chr2.3:12310611-12310630 None:intergenic 40.0%
! TCCTTTTTGGATCGTGTTTG+AGG - chr2.3:12310158-12310177 MS.gene034440:intron 40.0%
!! TTGTGGGTATTGGAAAGCTA+CGG - chr2.3:12309900-12309919 MS.gene034440:intron 40.0%
!!! GGGCCCCAATTTTTTTTTAG+GGG - chr2.3:12309526-12309545 MS.gene034440:intron 40.0%
AGACAAGAGAGAGAGTTGAG+AGG - chr2.3:12309853-12309872 MS.gene034440:CDS 45.0%
AGTTGTTCCCATTCCCAAAG+AGG + chr2.3:12310812-12310831 None:intergenic 45.0%
CCAAATTGTAGGTTCGTCCT+AGG - chr2.3:12309675-12309694 MS.gene034440:CDS 45.0%
CCTACAGAAGAAGAGCTAGT+TGG - chr2.3:12308880-12308899 MS.gene034440:CDS 45.0%
CCTAGGACGAACCTACAATT+TGG + chr2.3:12309678-12309697 None:intergenic 45.0%
CTCAACTCTCTCTCTTGTCT+TGG + chr2.3:12309853-12309872 None:intergenic 45.0%
CTTCTATCTACACAACCAGC+TGG - chr2.3:12308903-12308922 MS.gene034440:CDS 45.0%
GGATAGAAACGAAAACCAGG+TGG + chr2.3:12308862-12308881 None:intergenic 45.0%
GGATGGATCAGATGGTTCAA+TGG + chr2.3:12310049-12310068 None:intergenic 45.0%
GGCCACCAAAATCTCAGAAA+CGG - chr2.3:12309696-12309715 MS.gene034440:CDS 45.0%
GTAGGGTTGTATATGAGGCA+GGG - chr2.3:12309457-12309476 MS.gene034440:intron 45.0%
TACGTACTTGGAAGGTTCCA+TGG + chr2.3:12308991-12309010 None:intergenic 45.0%
TAGGAAAAGCTCCATCTGGA+AGG - chr2.3:12309992-12310011 MS.gene034440:intron 45.0%
TATCTACACAACCAGCTGGA+AGG - chr2.3:12308907-12308926 MS.gene034440:CDS 45.0%
TGTAGGGTTGTATATGAGGC+AGG - chr2.3:12309456-12309475 MS.gene034440:intron 45.0%
! CCAACTAGCTCTTCTTCTGT+AGG + chr2.3:12308883-12308902 None:intergenic 45.0%
!! TGTGGGTATTGGAAAGCTAC+GGG - chr2.3:12309901-12309920 MS.gene034440:intron 45.0%
!!! TTCTGAGATTTTGGTGGCCT+AGG + chr2.3:12309695-12309714 None:intergenic 45.0%
!!! AATTTATGATAAATATTTTA+AGG + chr2.3:12310248-12310267 None:intergenic 5.0%
ACCATTAGAGGGGCCAAAGA+CGG - chr2.3:12310595-12310614 MS.gene034440:intron 50.0%
ATGAACCTGACGAGCCTCTT+TGG - chr2.3:12310795-12310814 MS.gene034440:CDS 50.0%
CAAGAGAGAGAGTTGAGAGG+TGG - chr2.3:12309856-12309875 MS.gene034440:CDS 50.0%
TATATGAGGCAGGGCGAAGA+GGG - chr2.3:12309466-12309485 MS.gene034440:intron 50.0%
TGAACCTGACGAGCCTCTTT+GGG - chr2.3:12310796-12310815 MS.gene034440:CDS 50.0%
! CATGCTTTTGTCCTTCCAGC+TGG + chr2.3:12308921-12308940 None:intergenic 50.0%
! TGACGAGCCTCTTTGGGAAT+GGG - chr2.3:12310802-12310821 MS.gene034440:CDS 50.0%
!!! AGGGGCCGTTTCTGAGATTT+TGG + chr2.3:12309704-12309723 None:intergenic 50.0%
!!! GGCCGTTTCTGAGATTTTGG+TGG + chr2.3:12309701-12309720 None:intergenic 50.0%
ATCAACTTCCCACTCGGGAG+AGG - chr2.3:12310691-12310710 MS.gene034440:CDS 55.0%
CAAGTGGTAGCAGAGCTCGA+TGG - chr2.3:12310659-12310678 MS.gene034440:intron 55.0%
CATTCCCAAAGAGGCTCGTC+AGG + chr2.3:12310803-12310822 None:intergenic 55.0%
GAGGGTCAAGTGGCACGAAT+TGG - chr2.3:12310747-12310766 MS.gene034440:CDS 55.0%
GTATATGAGGCAGGGCGAAG+AGG - chr2.3:12309465-12309484 MS.gene034440:intron 55.0%
GTCGTGGAGACACAGAGCAA+TGG - chr2.3:12309815-12309834 MS.gene034440:CDS 55.0%
TCCGTCTTTGGCCCCTCTAA+TGG + chr2.3:12310599-12310618 None:intergenic 55.0%
TTTGCAGGGGAGAGATGTCG+TGG - chr2.3:12309799-12309818 MS.gene034440:CDS 55.0%
! CTGACGAGCCTCTTTGGGAA+TGG - chr2.3:12310801-12310820 MS.gene034440:CDS 55.0%
ACTTCCCACTCGGGAGAGGT+AGG - chr2.3:12310695-12310714 MS.gene034440:CDS 60.0%
CTTCCCACTCGGGAGAGGTA+GGG - chr2.3:12310696-12310715 MS.gene034440:CDS 60.0%
TCTCCCTACCTCTCCCGAGT+GGG + chr2.3:12310702-12310721 None:intergenic 60.0%
CTCTCCCTACCTCTCCCGAG+TGG + chr2.3:12310703-12310722 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 12308847 12310844 12308847 ID=MS.gene034440
chr2.3 mRNA 12308847 12310844 12308847 ID=MS.gene034440.t1;Parent=MS.gene034440
chr2.3 exon 12310688 12310844 12310688 ID=MS.gene034440.t1.exon1;Parent=MS.gene034440.t1
chr2.3 CDS 12310688 12310844 12310688 ID=cds.MS.gene034440.t1;Parent=MS.gene034440.t1
chr2.3 exon 12309605 12309894 12309605 ID=MS.gene034440.t1.exon2;Parent=MS.gene034440.t1
chr2.3 CDS 12309605 12309894 12309605 ID=cds.MS.gene034440.t1;Parent=MS.gene034440.t1
chr2.3 exon 12308847 12309164 12308847 ID=MS.gene034440.t1.exon3;Parent=MS.gene034440.t1
chr2.3 CDS 12308847 12309164 12308847 ID=cds.MS.gene034440.t1;Parent=MS.gene034440.t1
Gene Sequence

>MS.gene034440

ATGGAGGATTCCCCACCTGGTTTTCGTTTCTATCCTACAGAAGAAGAGCTAGTTGGCTTCTATCTACACAACCAGCTGGAAGGACAAAAGCATGAAGACATAAACAAAATCATACCTGTCATTGATATCAATGGCAAAGAGCCATGGAACCTTCCAAGTACGTAACACAATTTTTTTACGTGACTCATTCATTTCTTCATGATATATATCACTTTTATAATTTTGATTGTCTCAAAATAATTCTCATTCAAAATATACTTCAATATCTCACAACACTAGAAATATAAAATTAGCCATGAAGAAAAAAATTATCTCAAATTCTCCCGTTACTTAATCTAGTGATTTTATATTTGACATGCATACTCTATCTTTTTTTTTTTTTTTGAGGGAATGCATACTCTATCTATAAGTAGTGTCATGGTAAGTTAATATTTTTCATATACTATCAGAAAAAAGTTAATATTTTTCATAGATACAATACAATAGTTATTCTTTTTTGTATACAAATAAATATTTCAGCTTAATATAAGTGCATGTCTATGATTCCCTAAATATGTCTAAGATTGACACCGTCATTCATGTAGATATTTTCTATGATATTATACCACATGTAGGGTTGTATATGAGGCAGGGCGAAGAGGGCGACCGTCCTATACCCCAAAAAATAAGTACGAAATTTGGGCCCCAATTTTTTTTTAGGGGTTTATTAGGCCCTAAAAAAATTGCTTAGTTTTTTATATCAAATTTTATGTTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTAGTTAGAACCCAAATTGTAGGTTCGTCCTAGGCCACCAAAATCTCAGAAACGGCCCCTGAACACATGTGAGAGTAATATCTTACTAAAATATGATCGATGACAATGTAAATAAACTCTTGCTTGTAATCAGCATTTGCAGGGGAGAGATGTCGTGGAGACACAGAGCAATGGTTTTTCTTTTCACCAAGACAAGAGAGAGAGTTGAGAGGTGGAAGACCAAACAGAACAACATCTTGTGGGTATTGGAAAGCTACGGGTTCTCCTAGCTACGTTTACTCTTCTAACAACAAAGTTATTGGAATAAGGAAAACCATGGTGTTTTACATAGGAAAAGCTCCATCTGGAAGGAAAACAAAATGGAAGATGCATGAATATAAAGCCATTGAACCATCTGATCCATCCAATACAAACCCTCCTAAGGTATATTTGAAAAAGTAAAACTCGTCAGCATGATTAATATCAATCATGCTAATGAGTTCTTATTTTTCCCTTCCTTTTTGGATCGTGTTTGAGGTTTGCATCGGTTATGTTTGACCGTGATTCTCAAATAATATGTCACATATTGTAGTGTGATTCCACCTTAAAATATTTATCATAAATTTATAAACTTAAAAAGAGATCCATGACAACAATCAAGATTGTGACGTCATAATTTCAAAAATTTGTGTCTACAATGATACTAAATGCGATTAAAGTCATATTGATCATATTTGAATGTGATTTTATACAATATACAATAAATTTTGACGCGGTCTTAATATGATCACGATATAAAATCGTAGTCATAAATTCACATGTTATCATAATCTTAATTTTTTTAATTTTTTAATTGATCAATAATTTATTTTGGTGTGTTGTAGCTGCGACACGAAATCAGCTTGTGTCGCGTTTATGTGATATCGGGAAGCTTTAGTTCATTTGATCGAAGACCATTAGAGGGGCCAAAGACGGAGTTACAACTTGATCATGTTGCTTCAACAAGTGCTCATCAACAAGTGGTAGCAGAGCTCGATGGATCAAACTTATCAACTTCCCACTCGGGAGAGGTAGGGAGAGACCCTGATGCTGCTCTTAATATTGGAGGGTCAAGTGGCACGAATTGGAATGATGTACCAAATAATGGGGTTGATGAACCTGACGAGCCTCTTTGGGAATGGGAACAACTAAATTGGATCTAA
Protein sequence

>MS.gene034440.t1

MEDSPPGFRFYPTEEELVGFYLHNQLEGQKHEDINKIIPVIDINGKEPWNLPTFAGERCRGDTEQWFFFSPRQERELRGGRPNRTTSCGYWKATGSPSYVYSSNNKVIGIRKTMVFYIGKAPSGRKTKWKMHEYKAIEPSDPSNTNPPKLRHEISLCRVYVISGSFSSFDRRPLEGPKTELQLDHVASTSAHQQVVAELDGSNLSTSHSGEVGRDPDAALNIGGSSGTNWNDVPNNGVDEPDEPLWEWEQLNWI