Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034603.t1 | KEH41775.1 | 84.7 | 275 | 35 | 1 | 1 | 268 | 1 | 275 | 2.00E-125 | 458.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034603.t1 | Q9FG08 | 57.3 | 267 | 100 | 2 | 16 | 268 | 20 | 286 | 7.0e-79 | 295.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034603.t1 | A0A072VUJ8 | 84.7 | 275 | 35 | 1 | 1 | 268 | 1 | 275 | 1.4e-125 | 458.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene034603.t1 | TR | SET |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034603.t1 | MTR_1g054665 | 88.364 | 275 | 25 | 1 | 1 | 268 | 1 | 275 | 1.41e-176 | 489 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034603.t1 | AT5G06620 | 59.919 | 247 | 93 | 1 | 28 | 268 | 40 | 286 | 2.34e-103 | 305 |
| MS.gene034603.t1 | AT5G06620 | 51.462 | 171 | 76 | 2 | 29 | 192 | 41 | 211 | 2.41e-53 | 175 |
Find 93 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGTTTAAAATTTCCCTTTC+TGG | 0.196796 | 1.3:-39164182 | MS.gene034603:CDS |
| GACAGTTTCTGACAACTTAA+TGG | 0.207285 | 1.3:-39162730 | MS.gene034603:intron |
| CCAGGTTATGGACCCGATTT+TGG | 0.207827 | 1.3:+39162676 | None:intergenic |
| ATCCCAATGCACACATTATA+TGG | 0.261658 | 1.3:-39162931 | MS.gene034603:CDS |
| ACATTGGTACATCAATGTTT+TGG | 0.325382 | 1.3:-39163348 | MS.gene034603:CDS |
| CAAAAGGGAGAGGAGAGGTT+AGG | 0.338946 | 1.3:+39165682 | None:intergenic |
| AGAGGAGAGGTTAGGGAGCC+TGG | 0.340093 | 1.3:+39165690 | None:intergenic |
| AACATTGATGTACCAATGTT+TGG | 0.343718 | 1.3:+39163352 | None:intergenic |
| AATCATCTCAGGTGTCAAAT+TGG | 0.363128 | 1.3:+39164090 | None:intergenic |
| CACCTACCTGACTGCGTTTG+TGG | 0.364163 | 1.3:+39165647 | None:intergenic |
| AGGGTGGCAGACGGCGGGTT+CGG | 0.369692 | 1.3:+39165753 | None:intergenic |
| CGCATTGAGTTGGCTGGTGG+TGG | 0.393454 | 1.3:-39163302 | MS.gene034603:CDS |
| TAGAAAAGGATGCTTGTCTT+AGG | 0.396421 | 1.3:-39162652 | None:intergenic |
| AGCATTTCCAACAGCAGCTT+CGG | 0.399684 | 1.3:+39163235 | None:intergenic |
| AAAAGGGAGAGGAGAGGTTA+GGG | 0.405093 | 1.3:+39165683 | None:intergenic |
| TTTGCTACTCTTGCCTCGCC+AGG | 0.409626 | 1.3:-39165708 | MS.gene034603:CDS |
| GAGGGGAGGAAGGTGAAGGG+TGG | 0.412983 | 1.3:+39165737 | None:intergenic |
| TTGGCTTGCATGATCATATC+AGG | 0.415237 | 1.3:-39164151 | MS.gene034603:CDS |
| TATGTCAAGACTATCACTTC+TGG | 0.421083 | 1.3:+39164123 | None:intergenic |
| GTGAAGTGGTTTAGTGAAGC+GGG | 0.429539 | 1.3:+39165891 | None:intergenic |
| CAAGAGTAGCAAACGGGGTG+AGG | 0.430548 | 1.3:+39165718 | None:intergenic |
| ACCGCAGTCATGATTATAGA+AGG | 0.432694 | 1.3:+39163196 | None:intergenic |
| CCAAAATCGGGTCCATAACC+TGG | 0.438039 | 1.3:-39162676 | MS.gene034603:CDS |
| TGAGATCACCGGTAGGGATT+GGG | 0.440187 | 1.3:+39165785 | None:intergenic |
| ATCCATATAATGTGTGCATT+GGG | 0.443622 | 1.3:+39162929 | None:intergenic |
| CTCACCTCTAAAATCATCTC+AGG | 0.450152 | 1.3:+39164079 | None:intergenic |
| ATGAGATCACCGGTAGGGAT+TGG | 0.451811 | 1.3:+39165784 | None:intergenic |
| TCCCTTTCTGGTAAAGCGGT+TGG | 0.454495 | 1.3:-39164170 | MS.gene034603:CDS |
| GGGTGAGGGGAGGAAGGTGA+AGG | 0.455595 | 1.3:+39165733 | None:intergenic |
| TATCCATATAATGTGTGCAT+TGG | 0.459802 | 1.3:+39162928 | None:intergenic |
| AAGAGTAGCAAACGGGGTGA+GGG | 0.461472 | 1.3:+39165719 | None:intergenic |
| GTGGCAAGGGAGGGAACAAA+AGG | 0.469540 | 1.3:+39165666 | None:intergenic |
| CCCTTGCCACAAACGCAGTC+AGG | 0.470308 | 1.3:-39165653 | MS.gene034603:intron |
| GCGAGGCAAGAGTAGCAAAC+GGG | 0.470976 | 1.3:+39165712 | None:intergenic |
| CCTGACTGCGTTTGTGGCAA+GGG | 0.478899 | 1.3:+39165653 | None:intergenic |
| TAATGCAGTGGCAAAATTGA+AGG | 0.480874 | 1.3:-39162903 | MS.gene034603:CDS |
| CAATGCATTTCGCATTGAGT+TGG | 0.481923 | 1.3:-39163312 | MS.gene034603:CDS |
| ATCTCAGGTGTCAAATTGGC+AGG | 0.490131 | 1.3:+39164094 | None:intergenic |
| GGTGAAGGGTGGCAGACGGC+GGG | 0.490528 | 1.3:+39165748 | None:intergenic |
| GCCAACCGCTTTACCAGAAA+GGG | 0.492202 | 1.3:+39164169 | None:intergenic |
| AGCCAACCGCTTTACCAGAA+AGG | 0.512299 | 1.3:+39164168 | None:intergenic |
| GGCGAGGCAAGAGTAGCAAA+CGG | 0.513389 | 1.3:+39165711 | None:intergenic |
| ATGTTGAGATGAGAGCAAAT+TGG | 0.513802 | 1.3:-39165484 | MS.gene034603:CDS |
| GCCCTCCGTGACATTGATGA+AGG | 0.515818 | 1.3:-39162881 | MS.gene034603:intron |
| CAAACGGGGTGAGGGGAGGA+AGG | 0.521659 | 1.3:+39165727 | None:intergenic |
| GATTGGGCGAGTTGCGAAGA+CGG | 0.524161 | 1.3:+39165801 | None:intergenic |
| GCATTTCGCATTGAGTTGGC+TGG | 0.527315 | 1.3:-39163308 | MS.gene034603:CDS |
| ACCTGACTGCGTTTGTGGCA+AGG | 0.528948 | 1.3:+39165652 | None:intergenic |
| GTCCATAACCTGGATAGAAA+AGG | 0.529567 | 1.3:-39162666 | MS.gene034603:CDS |
| AGGTGAAGGGTGGCAGACGG+CGG | 0.534390 | 1.3:+39165747 | None:intergenic |
| TGCAATAAGTGCCTTTGTGA+AGG | 0.535808 | 1.3:+39163503 | None:intergenic |
| GTAGAAGCCGAAGCTGCTGT+TGG | 0.536645 | 1.3:-39163242 | MS.gene034603:CDS |
| GGTGAGGGGAGGAAGGTGAA+GGG | 0.538492 | 1.3:+39165734 | None:intergenic |
| GGGAACAAAAGGGAGAGGAG+AGG | 0.541889 | 1.3:+39165677 | None:intergenic |
| TTGGTGATAAAACATGACAT+AGG | 0.542767 | 1.3:+39162695 | None:intergenic |
| GGAAGGTGAAGGGTGGCAGA+CGG | 0.544300 | 1.3:+39165744 | None:intergenic |
| GACTGCGTTTGTGGCAAGGG+AGG | 0.552126 | 1.3:+39165656 | None:intergenic |
| AGAGGTTAGGGAGCCTGGCG+AGG | 0.556398 | 1.3:+39165695 | None:intergenic |
| GTGGCAGACGGCGGGTTCGG+CGG | 0.556828 | 1.3:+39165756 | None:intergenic |
| AGAGTAGCAAACGGGGTGAG+GGG | 0.558878 | 1.3:+39165720 | None:intergenic |
| TGAAGCGGGAAGAAGCTAAA+CGG | 0.561812 | 1.3:+39165905 | None:intergenic |
| GTAGCAAACGGGGTGAGGGG+AGG | 0.564387 | 1.3:+39165723 | None:intergenic |
| AGAGAGACTCGAATCGGAGG+TGG | 0.568166 | 1.3:+39165844 | None:intergenic |
| AGACGGCGGGTTCGGCGGTG+TGG | 0.568637 | 1.3:+39165761 | None:intergenic |
| GCAACTCGCCCAATCCCTAC+CGG | 0.570799 | 1.3:-39165793 | MS.gene034603:CDS |
| AGGGAGGGAACAAAAGGGAG+AGG | 0.577060 | 1.3:+39165672 | None:intergenic |
| TGTGAAGTGGTTTAGTGAAG+CGG | 0.577170 | 1.3:+39165890 | None:intergenic |
| AAGAGGGGTTCAACTTGCTA+AGG | 0.581272 | 1.3:-39163530 | MS.gene034603:CDS |
| AATCGGAGGTGGTGAAGAGG+TGG | 0.589639 | 1.3:+39165855 | None:intergenic |
| AATTTCCCTTTCTGGTAAAG+CGG | 0.590443 | 1.3:-39164174 | MS.gene034603:CDS |
| TCGGTGAGAGAGACTCGAAT+CGG | 0.592931 | 1.3:+39165838 | None:intergenic |
| GTTTCTGACAACTTAATGGA+AGG | 0.596043 | 1.3:-39162726 | MS.gene034603:CDS |
| CAGTCATGATTATAGAAGGA+AGG | 0.596544 | 1.3:+39163200 | None:intergenic |
| GGCGGTGTGGATGAGATCAC+CGG | 0.599696 | 1.3:+39165774 | None:intergenic |
| ACTGCGTTTGTGGCAAGGGA+GGG | 0.605495 | 1.3:+39165657 | None:intergenic |
| ACCTTCATCAATGTCACGGA+GGG | 0.613577 | 1.3:+39162880 | None:intergenic |
| TCGAATCGGAGGTGGTGAAG+AGG | 0.616387 | 1.3:+39165852 | None:intergenic |
| TGGCAAGGGAGGGAACAAAA+GGG | 0.619033 | 1.3:+39165667 | None:intergenic |
| GTCTCTCTCACCGACTCAGT+AGG | 0.624485 | 1.3:-39165829 | MS.gene034603:CDS |
| GTGAGAGAGACTCGAATCGG+AGG | 0.630122 | 1.3:+39165841 | None:intergenic |
| TGAGATGAGAGCAAATTGGA+CGG | 0.637903 | 1.3:-39165480 | MS.gene034603:CDS |
| TTTCGCATTGAGTTGGCTGG+TGG | 0.638184 | 1.3:-39163305 | MS.gene034603:CDS |
| TGTGGATGAGATCACCGGTA+GGG | 0.641895 | 1.3:+39165779 | None:intergenic |
| ACAAACCTTCATCAATGTCA+CGG | 0.645369 | 1.3:+39162876 | None:intergenic |
| GAAAATGAGAAGATGTGAAG+TGG | 0.653231 | 1.3:+39165877 | None:intergenic |
| GTGTGGATGAGATCACCGGT+AGG | 0.663265 | 1.3:+39165778 | None:intergenic |
| GACGGCGCGACCTACTGAGT+CGG | 0.664604 | 1.3:+39165819 | None:intergenic |
| CGAGGCAAGAGTAGCAAACG+GGG | 0.672756 | 1.3:+39165713 | None:intergenic |
| GCTAAGGAATGCCTTCACAA+AGG | 0.678500 | 1.3:-39163514 | MS.gene034603:CDS |
| TATATGGATAGATAATGCAG+TGG | 0.693112 | 1.3:-39162915 | MS.gene034603:CDS |
| TCCTTCTATAATCATGACTG+CGG | 0.694740 | 1.3:-39163197 | MS.gene034603:intron |
| TTGCTCTCATCTCAACATCG+TGG | 0.722442 | 1.3:+39165489 | None:intergenic |
| AACCTTCATCAATGTCACGG+AGG | 0.727757 | 1.3:+39162879 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCATTTTATTTTAGAATTA+TGG | + | chr1.3:39163275-39163294 | None:intergenic | 10.0% |
| !! | AAAACATAAAAACAATAACA+AGG | + | chr1.3:39163444-39163463 | None:intergenic | 15.0% |
| !! | AAACATAAAAACAATAACAA+GGG | + | chr1.3:39163443-39163462 | None:intergenic | 15.0% |
| !!! | GGATTTTGATATTTATTTAT+AGG | - | chr1.3:39163065-39163084 | MS.gene034603:intron | 15.0% |
| !! | AAATACTACATGATAAATTG+AGG | + | chr1.3:39164324-39164343 | None:intergenic | 20.0% |
| !! | AATCAAATAAAATACGATTG+AGG | + | chr1.3:39165731-39165750 | None:intergenic | 20.0% |
| !! | AGAAAACATACATTAATTGA+AGG | + | chr1.3:39164681-39164700 | None:intergenic | 20.0% |
| !! | GAAAACATACATTAATTGAA+GGG | + | chr1.3:39164680-39164699 | None:intergenic | 20.0% |
| !! | GTTTCAGTAATTTATCATTA+GGG | + | chr1.3:39164276-39164295 | None:intergenic | 20.0% |
| !! | TGTTTCAGTAATTTATCATT+AGG | + | chr1.3:39164277-39164296 | None:intergenic | 20.0% |
| !! | TTCAATTAGAACATCAATAA+TGG | + | chr1.3:39164960-39164979 | None:intergenic | 20.0% |
| !!! | ATTGAAGTTTGATAAAGTTT+TGG | - | chr1.3:39164974-39164993 | MS.gene034603:intron | 20.0% |
| !!! | ATTTTATTACTTAGAGTACA+AGG | + | chr1.3:39164021-39164040 | None:intergenic | 20.0% |
| !!! | TTTAAGTTTTAACCAAACAT+TGG | - | chr1.3:39165217-39165236 | MS.gene034603:intron | 20.0% |
| !!! | TTTTATTACTTAGAGTACAA+GGG | + | chr1.3:39164020-39164039 | None:intergenic | 20.0% |
| !!! | TTTTTCCCTTTTAATTTTGT+TGG | - | chr1.3:39165756-39165775 | MS.gene034603:CDS | 20.0% |
| ! | AAACAACACTTTATTCACTT+TGG | - | chr1.3:39163725-39163744 | MS.gene034603:intron | 25.0% |
| ! | AAGCAGTTTAATATGTTCTA+TGG | - | chr1.3:39163248-39163267 | MS.gene034603:CDS | 25.0% |
| ! | AATATTTGCCTTCCATATTT+AGG | - | chr1.3:39165525-39165544 | MS.gene034603:intron | 25.0% |
| ! | ATAAACAGAATTGGGAAATT+CGG | - | chr1.3:39163910-39163929 | MS.gene034603:intron | 25.0% |
| ! | TAAACAGATAAGTGAACTTA+GGG | + | chr1.3:39163313-39163332 | None:intergenic | 25.0% |
| ! | TACAAAATGTTCCTAAAAGA+AGG | + | chr1.3:39165124-39165143 | None:intergenic | 25.0% |
| ! | TACATAACTTCTCCTAAATA+TGG | + | chr1.3:39165540-39165559 | None:intergenic | 25.0% |
| ! | TATGTATAGCCCTAAAAAAA+GGG | - | chr1.3:39164091-39164110 | MS.gene034603:CDS | 25.0% |
| ! | TTATGTATAGCCCTAAAAAA+AGG | - | chr1.3:39164090-39164109 | MS.gene034603:CDS | 25.0% |
| ! | TTTATTACTTAGAGTACAAG+GGG | + | chr1.3:39164019-39164038 | None:intergenic | 25.0% |
| !! | AGGAACAAAGTAATTTTCAA+AGG | - | chr1.3:39163827-39163846 | MS.gene034603:intron | 25.0% |
| !! | ATGAGACTAATTTTTCTCTT+TGG | - | chr1.3:39163219-39163238 | MS.gene034603:CDS | 25.0% |
| !! | CTTTTACTTATAATCAACAC+TGG | - | chr1.3:39164810-39164829 | MS.gene034603:intron | 25.0% |
| !! | TCATGTTTTATCACCAAAAT+CGG | - | chr1.3:39165892-39165911 | MS.gene034603:CDS | 25.0% |
| !!! | CATTAATTGAAGGGTATTTT+AGG | + | chr1.3:39164671-39164690 | None:intergenic | 25.0% |
| !!! | GAATTTTCTAATTTAGCTTG+TGG | - | chr1.3:39163781-39163800 | MS.gene034603:intron | 25.0% |
| AAAAATGACAAGGTATAGAG+AGG | + | chr1.3:39165590-39165609 | None:intergenic | 30.0% | |
| AAACAGATAAGTGAACTTAG+GGG | + | chr1.3:39163312-39163331 | None:intergenic | 30.0% | |
| AAATGAACAATCTCACTCAT+TGG | - | chr1.3:39165619-39165638 | MS.gene034603:intron | 30.0% | |
| AAATTTCAAACCACCAAAAC+AGG | + | chr1.3:39163472-39163491 | None:intergenic | 30.0% | |
| AACATTGATGTACCAATGTT+TGG | + | chr1.3:39165232-39165251 | None:intergenic | 30.0% | |
| AATGACAATAACCATTTGAC+AGG | - | chr1.3:39164543-39164562 | MS.gene034603:intron | 30.0% | |
| AGCCAACCAACAAAATTAAA+AGG | + | chr1.3:39165765-39165784 | None:intergenic | 30.0% | |
| ATACAAACTCACAATGATGA+GGG | - | chr1.3:39163500-39163519 | MS.gene034603:CDS | 30.0% | |
| ATCCATATAATGTGTGCATT+GGG | + | chr1.3:39165655-39165674 | None:intergenic | 30.0% | |
| CAAAATTGTGTCTCAGATAA+AGG | - | chr1.3:39163868-39163887 | MS.gene034603:intron | 30.0% | |
| CTTGTGTTAAAAACAAGGTA+AGG | + | chr1.3:39164191-39164210 | None:intergenic | 30.0% | |
| GAAATATAAGCTCATGTTGA+CGG | + | chr1.3:39165441-39165460 | None:intergenic | 30.0% | |
| GCCAACCAACAAAATTAAAA+GGG | + | chr1.3:39165764-39165783 | None:intergenic | 30.0% | |
| GTAAACAGATAAGTGAACTT+AGG | + | chr1.3:39163314-39163333 | None:intergenic | 30.0% | |
| GTTAGTTGTGTACATTTGAA+TGG | - | chr1.3:39164591-39164610 | MS.gene034603:intron | 30.0% | |
| TAAACAGAATTGGGAAATTC+GGG | - | chr1.3:39163911-39163930 | MS.gene034603:intron | 30.0% | |
| TAACTTCTCCTAAATATGGA+AGG | + | chr1.3:39165536-39165555 | None:intergenic | 30.0% | |
| TATACAAACTCACAATGATG+AGG | - | chr1.3:39163499-39163518 | MS.gene034603:CDS | 30.0% | |
| TATAGAAGAAACCTGTCAAA+TGG | + | chr1.3:39164557-39164576 | None:intergenic | 30.0% | |
| TATATGGATAGATAATGCAG+TGG | - | chr1.3:39165666-39165685 | MS.gene034603:CDS | 30.0% | |
| TATCCATATAATGTGTGCAT+TGG | + | chr1.3:39165656-39165675 | None:intergenic | 30.0% | |
| TGCAAATACGTACTTATTCT+CGG | - | chr1.3:39163044-39163063 | MS.gene034603:intron | 30.0% | |
| TGTTGAGAGATTACTTATCT+TGG | - | chr1.3:39165191-39165210 | MS.gene034603:intron | 30.0% | |
| TTAAAGATTGTTGAAACCCA+TGG | + | chr1.3:39163183-39163202 | None:intergenic | 30.0% | |
| TTACTTATAATCAACACTGG+AGG | - | chr1.3:39164813-39164832 | MS.gene034603:intron | 30.0% | |
| TTTCCAGGGATTATTATGTA+TGG | - | chr1.3:39164217-39164236 | MS.gene034603:intron | 30.0% | |
| ! | ACATTGGTACATCAATGTTT+TGG | - | chr1.3:39165233-39165252 | MS.gene034603:intron | 30.0% |
| ! | AGCTTTCCTTTGAAAACTAA+CGG | + | chr1.3:39164902-39164921 | None:intergenic | 30.0% |
| ! | AGGTTTAAAATTTCCCTTTC+TGG | - | chr1.3:39164399-39164418 | MS.gene034603:intron | 30.0% |
| ! | ATTACCTAACCTCTTTTCAA+AGG | - | chr1.3:39164371-39164390 | MS.gene034603:intron | 30.0% |
| ! | ATTGCTTGTATCCTTCTTTT+AGG | - | chr1.3:39165110-39165129 | MS.gene034603:intron | 30.0% |
| ! | CATGTTTTATCACCAAAATC+GGG | - | chr1.3:39165893-39165912 | MS.gene034603:CDS | 30.0% |
| ! | GAAAGGGAAATTTTAAACCT+CGG | + | chr1.3:39164399-39164418 | None:intergenic | 30.0% |
| ! | GGTTGGTTATAAACAGAATT+GGG | - | chr1.3:39163902-39163921 | MS.gene034603:intron | 30.0% |
| ! | TATGTTTTCGTTACCTGTTT+TGG | - | chr1.3:39163456-39163475 | MS.gene034603:intron | 30.0% |
| ! | TTCAATGACTCTTTTTCTCA+TGG | - | chr1.3:39164703-39164722 | MS.gene034603:intron | 30.0% |
| ! | TTGGTGATAAAACATGACAT+AGG | + | chr1.3:39165889-39165908 | None:intergenic | 30.0% |
| !! | AGTTGAATGCTTTGTTTGTT+GGG | - | chr1.3:39163985-39164004 | MS.gene034603:intron | 30.0% |
| !! | ATCATTTTTCAGATGGAAGA+GGG | - | chr1.3:39165035-39165054 | MS.gene034603:intron | 30.0% |
| !! | GCATAACATCATTTTTCAGA+TGG | - | chr1.3:39165028-39165047 | MS.gene034603:intron | 30.0% |
| !! | TCATTGAATGCACTACTTTT+TGG | + | chr1.3:39165791-39165810 | None:intergenic | 30.0% |
| !!! | ATTGAAGGGTATTTTAGGAT+AGG | + | chr1.3:39164666-39164685 | None:intergenic | 30.0% |
| !!! | TACCTTGTTTTTAACACAAG+AGG | - | chr1.3:39164191-39164210 | MS.gene034603:CDS | 30.0% |
| !!! | TCCCTTTTAATTTTGTTGGT+TGG | - | chr1.3:39165760-39165779 | MS.gene034603:CDS | 30.0% |
| !!! | TTTCATCTACCCTTTTTTCT+CGG | - | chr1.3:39164865-39164884 | MS.gene034603:intron | 30.0% |
| AAAGAACCTAAACCTTACAC+TGG | + | chr1.3:39163336-39163355 | None:intergenic | 35.0% | |
| AATCATCTCAGGTGTCAAAT+TGG | + | chr1.3:39164494-39164513 | None:intergenic | 35.0% | |
| ACAAACCTTCATCAATGTCA+CGG | + | chr1.3:39165708-39165727 | None:intergenic | 35.0% | |
| ACACATGCATAAAGAGATCA+TGG | - | chr1.3:39165163-39165182 | MS.gene034603:intron | 35.0% | |
| ACCAGAAATTGCCTATCATA+GGG | + | chr1.3:39164243-39164262 | None:intergenic | 35.0% | |
| AGCCTCTTGTGTAAAAAACA+GGG | - | chr1.3:39163592-39163611 | MS.gene034603:intron | 35.0% | |
| AGCCTCTTGTGTTAAAAACA+AGG | + | chr1.3:39164196-39164215 | None:intergenic | 35.0% | |
| AGTGAGATTGTTCATTTCTC+AGG | + | chr1.3:39165616-39165635 | None:intergenic | 35.0% | |
| ATCCCAATGCACACATTATA+TGG | - | chr1.3:39165650-39165669 | MS.gene034603:intron | 35.0% | |
| ATGGAACAACTTCTCATGAA+GGG | - | chr1.3:39164722-39164741 | MS.gene034603:intron | 35.0% | |
| ATGTTGAGATGAGAGCAAAT+TGG | - | chr1.3:39163097-39163116 | MS.gene034603:intron | 35.0% | |
| ATTAGCATCTTCAATTGCCA+TGG | - | chr1.3:39163163-39163182 | MS.gene034603:intron | 35.0% | |
| ATTATGTATGGCCCTATGAT+AGG | - | chr1.3:39164229-39164248 | MS.gene034603:intron | 35.0% | |
| CAAATGCAAGTAGTCAAAGA+GGG | - | chr1.3:39163757-39163776 | MS.gene034603:intron | 35.0% | |
| CAGTCATGATTATAGAAGGA+AGG | + | chr1.3:39165384-39165403 | None:intergenic | 35.0% | |
| CTTATCTGTTTACCAGTGTA+AGG | - | chr1.3:39163321-39163340 | MS.gene034603:CDS | 35.0% | |
| CTTGAGAAAAACTCACATAC+CGG | + | chr1.3:39163143-39163162 | None:intergenic | 35.0% | |
| GAAAATGAGAAGATGTGAAG+TGG | + | chr1.3:39162707-39162726 | None:intergenic | 35.0% | |
| GACAGTTTCTGACAACTTAA+TGG | - | chr1.3:39165851-39165870 | MS.gene034603:CDS | 35.0% | |
| GTGAGATTGTTCATTTCTCA+GGG | + | chr1.3:39165615-39165634 | None:intergenic | 35.0% | |
| GTTTCTGACAACTTAATGGA+AGG | - | chr1.3:39165855-39165874 | MS.gene034603:CDS | 35.0% | |
| TAAAGCACAGTTGTCTTAAC+TGG | - | chr1.3:39165484-39165503 | MS.gene034603:CDS | 35.0% | |
| TAAAGTTGTTGTCATGTGAC+TGG | - | chr1.3:39163542-39163561 | MS.gene034603:intron | 35.0% | |
| TAATGCAGTGGCAAAATTGA+AGG | - | chr1.3:39165678-39165697 | MS.gene034603:CDS | 35.0% | |
| TACAAACTCACAATGATGAG+GGG | - | chr1.3:39163501-39163520 | MS.gene034603:CDS | 35.0% | |
| TATGTCAAGACTATCACTTC+TGG | + | chr1.3:39164461-39164480 | None:intergenic | 35.0% | |
| TCAAATGCAAGTAGTCAAAG+AGG | - | chr1.3:39163756-39163775 | MS.gene034603:intron | 35.0% | |
| TCAGATAAAGGTCTCATCAT+GGG | - | chr1.3:39163880-39163899 | MS.gene034603:intron | 35.0% | |
| TCCTTCTATAATCATGACTG+CGG | - | chr1.3:39165384-39165403 | MS.gene034603:intron | 35.0% | |
| TCTCAGGGTTAAAAATGACA+AGG | + | chr1.3:39165600-39165619 | None:intergenic | 35.0% | |
| TCTTGTGTAAAAAACAGGGA+GGG | - | chr1.3:39163596-39163615 | MS.gene034603:intron | 35.0% | |
| TGTTTACCAGTGTAAGGTTT+AGG | - | chr1.3:39163327-39163346 | MS.gene034603:CDS | 35.0% | |
| TTAGCATCTTCAATTGCCAT+GGG | - | chr1.3:39163164-39163183 | MS.gene034603:intron | 35.0% | |
| ! | AATTTCCCTTTCTGGTAAAG+CGG | - | chr1.3:39164407-39164426 | MS.gene034603:intron | 35.0% |
| ! | AGGTTAGGTAATTGTCACTT+AGG | + | chr1.3:39164363-39164382 | None:intergenic | 35.0% |
| ! | ATCCTTTTCTATCCAGGTTA+TGG | + | chr1.3:39165920-39165939 | None:intergenic | 35.0% |
| ! | GCTTTCCTTTGAAAACTAAC+GGG | + | chr1.3:39164901-39164920 | None:intergenic | 35.0% |
| !! | CATCATTTTTCAGATGGAAG+AGG | - | chr1.3:39165034-39165053 | MS.gene034603:intron | 35.0% |
| !! | CGGATTTTGATGATTATTGC+CGG | - | chr1.3:39163121-39163140 | MS.gene034603:intron | 35.0% |
| !! | CTTTATTCACTTTGGTTCTC+TGG | - | chr1.3:39163733-39163752 | MS.gene034603:intron | 35.0% |
| !! | GAGTTGAATGCTTTGTTTGT+TGG | - | chr1.3:39163984-39164003 | MS.gene034603:intron | 35.0% |
| !! | GGGTTGGTTATAAACAGAAT+TGG | - | chr1.3:39163901-39163920 | MS.gene034603:intron | 35.0% |
| !! | TAATTTAGCTTGTGGTGATG+TGG | - | chr1.3:39163789-39163808 | MS.gene034603:intron | 35.0% |
| !! | TCATTTTTCAGATGGAAGAG+GGG | - | chr1.3:39165036-39165055 | MS.gene034603:intron | 35.0% |
| !! | TCTGAGACACAATTTTGACA+AGG | + | chr1.3:39163865-39163884 | None:intergenic | 35.0% |
| ACCGCAGTCATGATTATAGA+AGG | + | chr1.3:39165388-39165407 | None:intergenic | 40.0% | |
| AGTCTCATTAATCATGCGAG+AGG | + | chr1.3:39163207-39163226 | None:intergenic | 40.0% | |
| AGTCTGTATAAAGAGCAACC+CGG | + | chr1.3:39163693-39163712 | None:intergenic | 40.0% | |
| CAATGCATTTCGCATTGAGT+TGG | - | chr1.3:39165269-39165288 | MS.gene034603:intron | 40.0% | |
| CAGATAAAGGTCTCATCATG+GGG | - | chr1.3:39163881-39163900 | MS.gene034603:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAAAC+AGG | - | chr1.3:39163591-39163610 | MS.gene034603:intron | 40.0% | |
| CATGGAACAACTTCTCATGA+AGG | - | chr1.3:39164721-39164740 | MS.gene034603:intron | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr1.3:39163627-39163646 | MS.gene034603:intron | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | + | chr1.3:39163646-39163627 | None:intergenic | 40.0% | |
| CTCAGATAAAGGTCTCATCA+TGG | - | chr1.3:39163879-39163898 | MS.gene034603:intron | 40.0% | |
| CTCTTGTGTAAAAAACAGGG+AGG | - | chr1.3:39163595-39163614 | MS.gene034603:intron | 40.0% | |
| GACCAGAAATTGCCTATCAT+AGG | + | chr1.3:39164244-39164263 | None:intergenic | 40.0% | |
| GGTAGACATCCGAGAAAAAA+GGG | + | chr1.3:39164877-39164896 | None:intergenic | 40.0% | |
| GTCCATAACCTGGATAGAAA+AGG | - | chr1.3:39165915-39165934 | MS.gene034603:CDS | 40.0% | |
| TGAGATGAGAGCAAATTGGA+CGG | - | chr1.3:39163101-39163120 | MS.gene034603:intron | 40.0% | |
| TGCAATAAGTGCCTTTGTGA+AGG | + | chr1.3:39165081-39165100 | None:intergenic | 40.0% | |
| TGGTAGACATCCGAGAAAAA+AGG | + | chr1.3:39164878-39164897 | None:intergenic | 40.0% | |
| TGTAAAAAACAGGGAGGGTA+AGG | - | chr1.3:39163601-39163620 | MS.gene034603:intron | 40.0% | |
| TGTGAAGTGGTTTAGTGAAG+CGG | + | chr1.3:39162694-39162713 | None:intergenic | 40.0% | |
| TTGATACCTGACTTCACTTC+TGG | - | chr1.3:39162964-39162983 | MS.gene034603:intron | 40.0% | |
| ! | ACAAGCATCCTTTTCTATCC+AGG | + | chr1.3:39165926-39165945 | None:intergenic | 40.0% |
| ! | GACACCTGAGATGATTTTAG+AGG | - | chr1.3:39164498-39164517 | MS.gene034603:intron | 40.0% |
| ! | GGTTCCTTTGAAAAGAGGTT+AGG | + | chr1.3:39164378-39164397 | None:intergenic | 40.0% |
| ! | GTGTGCAATTTACTGATTGG+CGG | - | chr1.3:39163933-39163952 | MS.gene034603:intron | 40.0% |
| ! | TCTATGCGTGTGGAATTTTC+TGG | + | chr1.3:39165564-39165583 | None:intergenic | 40.0% |
| ! | TTCCTTTGAAAACTAACGGG+TGG | + | chr1.3:39164898-39164917 | None:intergenic | 40.0% |
| !! | ATGATAGGCAATTTCTGGTC+TGG | - | chr1.3:39164244-39164263 | MS.gene034603:intron | 40.0% |
| !! | CTCACCTCTAAAATCATCTC+AGG | + | chr1.3:39164505-39164524 | None:intergenic | 40.0% |
| !! | GAACTACTAGTGGATTGAAG+AGG | + | chr1.3:39164622-39164641 | None:intergenic | 40.0% |
| !! | GAAGCATTGAGAACTACTAG+TGG | + | chr1.3:39164632-39164651 | None:intergenic | 40.0% |
| !! | GATGAAAAGTGCTTGCTAGT+TGG | + | chr1.3:39164852-39164871 | None:intergenic | 40.0% |
| !! | GTTTTCGTTACCTGTTTTGG+TGG | - | chr1.3:39163459-39163478 | MS.gene034603:intron | 40.0% |
| !! | TTGGCTTGCATGATCATATC+AGG | - | chr1.3:39164430-39164449 | MS.gene034603:intron | 40.0% |
| !!! | CTCCCTGTTTTTTACACAAG+AGG | + | chr1.3:39163597-39163616 | None:intergenic | 40.0% |
| !!! | TACCACCCGTTAGTTTTCAA+AGG | - | chr1.3:39164893-39164912 | MS.gene034603:intron | 40.0% |
| AAAAGGGAGAGGAGAGGTTA+GGG | + | chr1.3:39162901-39162920 | None:intergenic | 45.0% | |
| AAAGTCACAGGTTCAAGTCC+TGG | - | chr1.3:39163565-39163584 | MS.gene034603:intron | 45.0% | |
| AACCTTCATCAATGTCACGG+AGG | + | chr1.3:39165705-39165724 | None:intergenic | 45.0% | |
| ACAATGATGAGGGGTAACCT+TGG | - | chr1.3:39163510-39163529 | MS.gene034603:CDS | 45.0% | |
| ACCTTCATCAATGTCACGGA+GGG | + | chr1.3:39165704-39165723 | None:intergenic | 45.0% | |
| ACTAAAGCTCCCAATTAGGC+AGG | + | chr1.3:39163667-39163686 | None:intergenic | 45.0% | |
| AGCATTTCCAACAGCAGCTT+CGG | + | chr1.3:39165349-39165368 | None:intergenic | 45.0% | |
| ATCTCAGGTGTCAAATTGGC+AGG | + | chr1.3:39164490-39164509 | None:intergenic | 45.0% | |
| CAACTTTACCAATTGCGCCA+AGG | + | chr1.3:39163530-39163549 | None:intergenic | 45.0% | |
| CGGGTGTGCAATTTACTGAT+TGG | - | chr1.3:39163930-39163949 | MS.gene034603:intron | 45.0% | |
| CTAAAGCTCCCAATTAGGCA+GGG | + | chr1.3:39163666-39163685 | None:intergenic | 45.0% | |
| GCAGCGTACAATACACCAAA+TGG | + | chr1.3:39164169-39164188 | None:intergenic | 45.0% | |
| GCCCTATGATAGGCAATTTC+TGG | - | chr1.3:39164239-39164258 | MS.gene034603:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr1.3:39163626-39163645 | MS.gene034603:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | + | chr1.3:39163645-39163626 | None:intergenic | 45.0% | |
| GCTAAGGAATGCCTTCACAA+AGG | - | chr1.3:39165067-39165086 | MS.gene034603:intron | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr1.3:39163623-39163642 | MS.gene034603:intron | 45.0% | |
| GGGCCATACATAATAATCCC+TGG | + | chr1.3:39164223-39164242 | None:intergenic | 45.0% | |
| GTCTGATTCAGACAGTACAG+TGG | - | chr1.3:39163373-39163392 | MS.gene034603:intron | 45.0% | |
| GTGAAGTGGTTTAGTGAAGC+GGG | + | chr1.3:39162693-39162712 | None:intergenic | 45.0% | |
| GTGCACTAAAGCTCCCAATT+AGG | + | chr1.3:39163671-39163690 | None:intergenic | 45.0% | |
| TAAAGGTCTCATCATGGGGT+TGG | - | chr1.3:39163885-39163904 | MS.gene034603:intron | 45.0% | |
| TCATGTGACTGGAAAGTCAC+AGG | - | chr1.3:39163553-39163572 | MS.gene034603:intron | 45.0% | |
| TGAAGCGGGAAGAAGCTAAA+CGG | + | chr1.3:39162679-39162698 | None:intergenic | 45.0% | |
| TTGCTCTCATCTCAACATCG+TGG | + | chr1.3:39163095-39163114 | None:intergenic | 45.0% | |
| ! | AACACAAGAGGCTGTTTCCA+GGG | - | chr1.3:39164203-39164222 | MS.gene034603:intron | 45.0% |
| ! | AATTGGGAGCTTTAGTGCAC+CGG | - | chr1.3:39163671-39163690 | MS.gene034603:intron | 45.0% |
| ! | ACCTCGGTTCCTTTGAAAAG+AGG | + | chr1.3:39164383-39164402 | None:intergenic | 45.0% |
| ! | ACCTCTTTTCAAAGGAACCG+AGG | - | chr1.3:39164379-39164398 | MS.gene034603:intron | 45.0% |
| ! | ATGCTGGAGCTTTAGTGCAA+CGG | + | chr1.3:39164121-39164140 | None:intergenic | 45.0% |
| ! | TAACACAAGAGGCTGTTTCC+AGG | - | chr1.3:39164202-39164221 | MS.gene034603:intron | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | + | chr1.3:39163586-39163605 | None:intergenic | 45.0% |
| !! | AAGAGGGGTTCAACTTGCTA+AGG | - | chr1.3:39165051-39165070 | MS.gene034603:intron | 45.0% |
| !! | TGTGGTGTCTCTGAGATGTA+AGG | - | chr1.3:39163807-39163826 | MS.gene034603:intron | 45.0% |
| !!! | AACGGGCTGCCCTTTTTTTA+GGG | + | chr1.3:39164103-39164122 | None:intergenic | 45.0% |
| AAGAGTAGCAAACGGGGTGA+GGG | + | chr1.3:39162865-39162884 | None:intergenic | 50.0% | |
| ACAGCTCCAGAAGTGAAGTC+AGG | + | chr1.3:39162973-39162992 | None:intergenic | 50.0% | |
| AGAGAGGTTGTCTATGCGTG+TGG | + | chr1.3:39165574-39165593 | None:intergenic | 50.0% | |
| AGCATGCATAGCTTCCAGGA+AGG | - | chr1.3:39164136-39164155 | MS.gene034603:CDS | 50.0% | |
| AGCCAACCGCTTTACCAGAA+AGG | + | chr1.3:39164416-39164435 | None:intergenic | 50.0% | |
| ATGAGATCACCGGTAGGGAT+TGG | + | chr1.3:39162800-39162819 | None:intergenic | 50.0% | |
| CAAAAGGGAGAGGAGAGGTT+AGG | + | chr1.3:39162902-39162921 | None:intergenic | 50.0% | |
| CATGCATAGCTTCCAGGAAG+GGG | - | chr1.3:39164138-39164157 | MS.gene034603:CDS | 50.0% | |
| CCAAAATCGGGTCCATAACC+TGG | - | chr1.3:39165905-39165924 | MS.gene034603:CDS | 50.0% | |
| GCATGCATAGCTTCCAGGAA+GGG | - | chr1.3:39164137-39164156 | MS.gene034603:CDS | 50.0% | |
| GCCAACCGCTTTACCAGAAA+GGG | + | chr1.3:39164415-39164434 | None:intergenic | 50.0% | |
| TCGGTGAGAGAGACTCGAAT+CGG | + | chr1.3:39162746-39162765 | None:intergenic | 50.0% | |
| TGAGATCACCGGTAGGGATT+GGG | + | chr1.3:39162799-39162818 | None:intergenic | 50.0% | |
| TGGCAAGGGAGGGAACAAAA+GGG | + | chr1.3:39162917-39162936 | None:intergenic | 50.0% | |
| TGTGGATGAGATCACCGGTA+GGG | + | chr1.3:39162805-39162824 | None:intergenic | 50.0% | |
| TTCCTGGAAGCTATGCATGC+TGG | + | chr1.3:39164137-39164156 | None:intergenic | 50.0% | |
| ! | ATTGGGAGCTTTAGTGCACC+GGG | - | chr1.3:39163672-39163691 | MS.gene034603:intron | 50.0% |
| ! | CCAGGTTATGGACCCGATTT+TGG | + | chr1.3:39165908-39165927 | None:intergenic | 50.0% |
| ! | TCCCTTTCTGGTAAAGCGGT+TGG | - | chr1.3:39164411-39164430 | MS.gene034603:intron | 50.0% |
| ! | TGCTGGAGCTTTAGTGCAAC+GGG | + | chr1.3:39164120-39164139 | None:intergenic | 50.0% |
| !! | GCATTTCGCATTGAGTTGGC+TGG | - | chr1.3:39165273-39165292 | MS.gene034603:intron | 50.0% |
| !! | TTTCGCATTGAGTTGGCTGG+TGG | - | chr1.3:39165276-39165295 | MS.gene034603:intron | 50.0% |
| !!! | CAACGGGCTGCCCTTTTTTT+AGG | + | chr1.3:39164104-39164123 | None:intergenic | 50.0% |
| AATCGGAGGTGGTGAAGAGG+TGG | + | chr1.3:39162729-39162748 | None:intergenic | 55.0% | |
| AATTAGGCAGGGTCCGGGAA+GGG | + | chr1.3:39163655-39163674 | None:intergenic | 55.0% | |
| ACCTGACTGCGTTTGTGGCA+AGG | + | chr1.3:39162932-39162951 | None:intergenic | 55.0% | |
| ACTGCGTTTGTGGCAAGGGA+GGG | + | chr1.3:39162927-39162946 | None:intergenic | 55.0% | |
| AGAGAGACTCGAATCGGAGG+TGG | + | chr1.3:39162740-39162759 | None:intergenic | 55.0% | |
| AGAGTAGCAAACGGGGTGAG+GGG | + | chr1.3:39162864-39162883 | None:intergenic | 55.0% | |
| AGGGAGGGAACAAAAGGGAG+AGG | + | chr1.3:39162912-39162931 | None:intergenic | 55.0% | |
| AGGGGTAACCTTGGCGCAAT+TGG | - | chr1.3:39163519-39163538 | MS.gene034603:CDS | 55.0% | |
| CAAGAGTAGCAAACGGGGTG+AGG | + | chr1.3:39162866-39162885 | None:intergenic | 55.0% | |
| CACCTACCTGACTGCGTTTG+TGG | + | chr1.3:39162937-39162956 | None:intergenic | 55.0% | |
| CCTGACTGCGTTTGTGGCAA+GGG | + | chr1.3:39162931-39162950 | None:intergenic | 55.0% | |
| CGAGGCAAGAGTAGCAAACG+GGG | + | chr1.3:39162871-39162890 | None:intergenic | 55.0% | |
| CTCCAGCATGCATAGCTTCC+AGG | - | chr1.3:39164132-39164151 | MS.gene034603:CDS | 55.0% | |
| GATTGGGCGAGTTGCGAAGA+CGG | + | chr1.3:39162783-39162802 | None:intergenic | 55.0% | |
| GCCCTCCGTGACATTGATGA+AGG | - | chr1.3:39165700-39165719 | MS.gene034603:CDS | 55.0% | |
| GCGAGGCAAGAGTAGCAAAC+GGG | + | chr1.3:39162872-39162891 | None:intergenic | 55.0% | |
| GGCGAGGCAAGAGTAGCAAA+CGG | + | chr1.3:39162873-39162892 | None:intergenic | 55.0% | |
| GGGAACAAAAGGGAGAGGAG+AGG | + | chr1.3:39162907-39162926 | None:intergenic | 55.0% | |
| GTAGAAGCCGAAGCTGCTGT+TGG | - | chr1.3:39165339-39165358 | MS.gene034603:intron | 55.0% | |
| GTGAGAGAGACTCGAATCGG+AGG | + | chr1.3:39162743-39162762 | None:intergenic | 55.0% | |
| GTGGCAAGGGAGGGAACAAA+AGG | + | chr1.3:39162918-39162937 | None:intergenic | 55.0% | |
| GTGTGGATGAGATCACCGGT+AGG | + | chr1.3:39162806-39162825 | None:intergenic | 55.0% | |
| TCGAATCGGAGGTGGTGAAG+AGG | + | chr1.3:39162732-39162751 | None:intergenic | 55.0% | |
| TGCCACAAACGCAGTCAGGT+AGG | - | chr1.3:39162932-39162951 | MS.gene034603:CDS | 55.0% | |
| TTCCCGGACCCTGCCTAATT+GGG | - | chr1.3:39163655-39163674 | MS.gene034603:intron | 55.0% | |
| TTTGCTACTCTTGCCTCGCC+AGG | - | chr1.3:39162873-39162892 | MS.gene034603:intron | 55.0% | |
| !! | GTCTCTCTCACCGACTCAGT+AGG | - | chr1.3:39162752-39162771 | MS.gene034603:intron | 55.0% |
| AGAGGAGAGGTTAGGGAGCC+TGG | + | chr1.3:39162894-39162913 | None:intergenic | 60.0% | |
| ATTAGGCAGGGTCCGGGAAG+GGG | + | chr1.3:39163654-39163673 | None:intergenic | 60.0% | |
| CAATTAGGCAGGGTCCGGGA+AGG | + | chr1.3:39163656-39163675 | None:intergenic | 60.0% | |
| CAGGAAGGGGTCCCACCATT+TGG | - | chr1.3:39164151-39164170 | MS.gene034603:CDS | 60.0% | |
| CCCTTGCCACAAACGCAGTC+AGG | - | chr1.3:39162928-39162947 | MS.gene034603:CDS | 60.0% | |
| CTCCCAATTAGGCAGGGTCC+GGG | + | chr1.3:39163660-39163679 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCCTAAT+TGG | - | chr1.3:39163654-39163673 | MS.gene034603:intron | 60.0% | |
| GACTGCGTTTGTGGCAAGGG+AGG | + | chr1.3:39162928-39162947 | None:intergenic | 60.0% | |
| GCAACTCGCCCAATCCCTAC+CGG | - | chr1.3:39162788-39162807 | MS.gene034603:intron | 60.0% | |
| GCTCCCAATTAGGCAGGGTC+CGG | + | chr1.3:39163661-39163680 | None:intergenic | 60.0% | |
| GGAAGGTGAAGGGTGGCAGA+CGG | + | chr1.3:39162840-39162859 | None:intergenic | 60.0% | |
| GGCGGTGTGGATGAGATCAC+CGG | + | chr1.3:39162810-39162829 | None:intergenic | 60.0% | |
| GGTGAGGGGAGGAAGGTGAA+GGG | + | chr1.3:39162850-39162869 | None:intergenic | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr1.3:39163639-39163658 | MS.gene034603:intron | 60.0% |
| ! | CAAATGGTGGGACCCCTTCC+TGG | + | chr1.3:39163658-39163639 | None:intergenic | 60.0% |
| !! | CGCATTGAGTTGGCTGGTGG+TGG | - | chr1.3:39165279-39165298 | MS.gene034603:intron | 60.0% |
| AGAGGTTAGGGAGCCTGGCG+AGG | + | chr1.3:39162889-39162908 | None:intergenic | 65.0% | |
| AGGTGAAGGGTGGCAGACGG+CGG | + | chr1.3:39162837-39162856 | None:intergenic | 65.0% | |
| CAAACGGGGTGAGGGGAGGA+AGG | + | chr1.3:39162857-39162876 | None:intergenic | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr1.3:39163641-39163660 | None:intergenic | 65.0% | |
| GACGGCGCGACCTACTGAGT+CGG | + | chr1.3:39162765-39162784 | None:intergenic | 65.0% | |
| GAGGGGAGGAAGGTGAAGGG+TGG | + | chr1.3:39162847-39162866 | None:intergenic | 65.0% | |
| GGGTGAGGGGAGGAAGGTGA+AGG | + | chr1.3:39162851-39162870 | None:intergenic | 65.0% | |
| GTAGCAAACGGGGTGAGGGG+AGG | + | chr1.3:39162861-39162880 | None:intergenic | 65.0% | |
| GGTGAAGGGTGGCAGACGGC+GGG | + | chr1.3:39162836-39162855 | None:intergenic | 70.0% | |
| ! | AGGGTGGCAGACGGCGGGTT+CGG | + | chr1.3:39162831-39162850 | None:intergenic | 70.0% |
| ! | AGACGGCGGGTTCGGCGGTG+TGG | + | chr1.3:39162823-39162842 | None:intergenic | 75.0% |
| ! | GTGGCAGACGGCGGGTTCGG+CGG | + | chr1.3:39162828-39162847 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 39162653 | 39165950 | 39162653 | ID=MS.gene034603 |
| chr1.3 | mRNA | 39162653 | 39165950 | 39162653 | ID=MS.gene034603.t1;Parent=MS.gene034603 |
| chr1.3 | exon | 39165654 | 39165950 | 39165654 | ID=MS.gene034603.t1.exon1;Parent=MS.gene034603.t1 |
| chr1.3 | CDS | 39165654 | 39165950 | 39165654 | ID=cds.MS.gene034603.t1;Parent=MS.gene034603.t1 |
| chr1.3 | exon | 39165461 | 39165516 | 39165461 | ID=MS.gene034603.t1.exon2;Parent=MS.gene034603.t1 |
| chr1.3 | CDS | 39165461 | 39165516 | 39165461 | ID=cds.MS.gene034603.t1;Parent=MS.gene034603.t1 |
| chr1.3 | exon | 39164084 | 39164210 | 39164084 | ID=MS.gene034603.t1.exon3;Parent=MS.gene034603.t1 |
| chr1.3 | CDS | 39164084 | 39164210 | 39164084 | ID=cds.MS.gene034603.t1;Parent=MS.gene034603.t1 |
| chr1.3 | exon | 39163487 | 39163556 | 39163487 | ID=MS.gene034603.t1.exon4;Parent=MS.gene034603.t1 |
| chr1.3 | CDS | 39163487 | 39163556 | 39163487 | ID=cds.MS.gene034603.t1;Parent=MS.gene034603.t1 |
| chr1.3 | exon | 39163198 | 39163380 | 39163198 | ID=MS.gene034603.t1.exon5;Parent=MS.gene034603.t1 |
| chr1.3 | CDS | 39163198 | 39163380 | 39163198 | ID=cds.MS.gene034603.t1;Parent=MS.gene034603.t1 |
| chr1.3 | exon | 39162882 | 39162953 | 39162882 | ID=MS.gene034603.t1.exon6;Parent=MS.gene034603.t1 |
| chr1.3 | CDS | 39162882 | 39162953 | 39162882 | ID=cds.MS.gene034603.t1;Parent=MS.gene034603.t1 |
| chr1.3 | exon | 39162653 | 39162747 | 39162653 | ID=MS.gene034603.t1.exon7;Parent=MS.gene034603.t1 |
| chr1.3 | CDS | 39162653 | 39162747 | 39162653 | ID=cds.MS.gene034603.t1;Parent=MS.gene034603.t1 |
| Gene Sequence |
| Protein sequence |
