Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene034757.t1 | XP_013467899.1 | 97.8 | 651 | 11 | 3 | 1 | 650 | 1 | 649 | 0.00E+00 | 1156.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene034757.t1 | Q9SJ56 | 48.5 | 724 | 255 | 25 | 1 | 650 | 1 | 680 | 3.2e-145 | 516.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene034757.t1 | A0A072VK10 | 97.8 | 651 | 11 | 3 | 1 | 650 | 1 | 649 | 0.0e+00 | 1156.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene034757.t1 | TF | HB-BELL |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene034757.t1 | MTR_1g057790 | 98.310 | 651 | 8 | 3 | 1 | 650 | 1 | 649 | 0.0 | 1324 |
MS.gene034757.t1 | MTR_7g106320 | 65.130 | 694 | 164 | 23 | 1 | 650 | 1 | 660 | 0.0 | 785 |
MS.gene034757.t1 | MTR_4g051532 | 46.676 | 737 | 280 | 28 | 1 | 650 | 1 | 711 | 2.12e-165 | 491 |
MS.gene034757.t1 | MTR_1g023050 | 54.870 | 308 | 119 | 5 | 142 | 439 | 148 | 445 | 7.21e-100 | 318 |
MS.gene034757.t1 | MTR_3g112300 | 54.266 | 293 | 117 | 6 | 150 | 435 | 148 | 430 | 5.99e-95 | 302 |
MS.gene034757.t1 | MTR_3g112300 | 54.266 | 293 | 117 | 6 | 150 | 435 | 148 | 430 | 3.70e-94 | 302 |
MS.gene034757.t1 | MTR_5g018860 | 46.552 | 348 | 160 | 6 | 153 | 477 | 330 | 674 | 2.17e-88 | 291 |
MS.gene034757.t1 | MTR_8g078480 | 53.103 | 290 | 116 | 4 | 157 | 434 | 384 | 665 | 5.76e-87 | 290 |
MS.gene034757.t1 | MTR_8g098815 | 53.558 | 267 | 116 | 3 | 161 | 424 | 185 | 446 | 1.78e-79 | 264 |
MS.gene034757.t1 | MTR_3g112300 | 52.381 | 252 | 106 | 5 | 150 | 394 | 148 | 392 | 3.77e-77 | 251 |
MS.gene034757.t1 | MTR_3g112290 | 47.584 | 269 | 122 | 4 | 160 | 420 | 164 | 421 | 5.72e-72 | 239 |
MS.gene034757.t1 | MTR_4g019450 | 41.617 | 334 | 145 | 7 | 156 | 470 | 191 | 493 | 3.90e-70 | 239 |
MS.gene034757.t1 | MTR_7g065050 | 45.066 | 304 | 128 | 8 | 153 | 443 | 129 | 406 | 9.03e-68 | 230 |
MS.gene034757.t1 | MTR_2g095050 | 40.498 | 321 | 166 | 7 | 112 | 419 | 203 | 511 | 8.41e-66 | 228 |
MS.gene034757.t1 | MTR_3g112300 | 49.784 | 231 | 102 | 5 | 150 | 373 | 148 | 371 | 4.00e-64 | 216 |
MS.gene034757.t1 | MTR_1g016490 | 35.211 | 284 | 155 | 5 | 162 | 433 | 244 | 510 | 7.07e-49 | 179 |
MS.gene034757.t1 | MTR_7g114930 | 91.892 | 37 | 3 | 0 | 528 | 564 | 9 | 45 | 6.26e-17 | 75.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene034757.t1 | AT2G35940 | 50.339 | 737 | 222 | 24 | 1 | 650 | 1 | 680 | 0.0 | 558 |
MS.gene034757.t1 | AT2G35940 | 50.339 | 737 | 222 | 24 | 1 | 650 | 1 | 680 | 0.0 | 558 |
MS.gene034757.t1 | AT2G35940 | 50.339 | 737 | 222 | 24 | 1 | 650 | 1 | 680 | 0.0 | 558 |
MS.gene034757.t1 | AT2G16400 | 54.082 | 294 | 115 | 4 | 144 | 435 | 97 | 372 | 2.41e-97 | 307 |
MS.gene034757.t1 | AT4G34610 | 51.543 | 324 | 118 | 7 | 124 | 429 | 94 | 396 | 2.19e-92 | 296 |
MS.gene034757.t1 | AT4G34610 | 51.543 | 324 | 118 | 7 | 124 | 429 | 94 | 396 | 2.19e-92 | 296 |
MS.gene034757.t1 | AT4G34610 | 51.543 | 324 | 118 | 7 | 124 | 429 | 94 | 396 | 2.19e-92 | 296 |
MS.gene034757.t1 | AT4G34610 | 51.543 | 324 | 118 | 7 | 124 | 429 | 94 | 396 | 2.19e-92 | 296 |
MS.gene034757.t1 | AT1G75410 | 52.921 | 291 | 122 | 5 | 156 | 442 | 162 | 441 | 1.17e-91 | 294 |
MS.gene034757.t1 | AT1G75410 | 52.921 | 291 | 122 | 5 | 156 | 442 | 162 | 441 | 1.17e-91 | 294 |
MS.gene034757.t1 | AT1G19700 | 56.679 | 277 | 106 | 7 | 152 | 421 | 156 | 425 | 4.30e-91 | 293 |
MS.gene034757.t1 | AT1G19700 | 56.679 | 277 | 106 | 7 | 152 | 421 | 156 | 425 | 4.30e-91 | 293 |
MS.gene034757.t1 | AT1G19700 | 56.679 | 277 | 106 | 7 | 152 | 421 | 156 | 425 | 4.30e-91 | 293 |
MS.gene034757.t1 | AT1G19700 | 56.679 | 277 | 106 | 7 | 152 | 421 | 156 | 425 | 4.30e-91 | 293 |
MS.gene034757.t1 | AT1G19700 | 56.679 | 277 | 106 | 7 | 152 | 421 | 156 | 425 | 4.30e-91 | 293 |
MS.gene034757.t1 | AT2G27220 | 47.093 | 344 | 138 | 8 | 163 | 496 | 78 | 387 | 6.19e-85 | 273 |
MS.gene034757.t1 | AT2G27220 | 47.093 | 344 | 138 | 8 | 163 | 496 | 78 | 387 | 6.19e-85 | 273 |
MS.gene034757.t1 | AT2G27220 | 44.751 | 362 | 138 | 9 | 163 | 496 | 78 | 405 | 4.91e-81 | 263 |
MS.gene034757.t1 | AT4G36870 | 50.000 | 296 | 126 | 5 | 161 | 443 | 312 | 598 | 3.15e-80 | 269 |
MS.gene034757.t1 | AT4G36870 | 50.000 | 296 | 126 | 5 | 161 | 443 | 312 | 598 | 3.15e-80 | 269 |
MS.gene034757.t1 | AT2G23760 | 51.673 | 269 | 112 | 4 | 155 | 414 | 232 | 491 | 8.51e-78 | 260 |
MS.gene034757.t1 | AT2G23760 | 51.673 | 269 | 112 | 4 | 155 | 414 | 232 | 491 | 8.51e-78 | 260 |
MS.gene034757.t1 | AT2G23760 | 51.673 | 269 | 112 | 4 | 155 | 414 | 232 | 491 | 8.51e-78 | 260 |
MS.gene034757.t1 | AT1G75410 | 53.498 | 243 | 98 | 5 | 156 | 394 | 162 | 393 | 1.23e-73 | 243 |
MS.gene034757.t1 | AT5G41410 | 45.985 | 274 | 132 | 3 | 164 | 423 | 196 | 467 | 1.53e-72 | 246 |
MS.gene034757.t1 | AT2G23760 | 43.302 | 321 | 112 | 5 | 155 | 414 | 232 | 543 | 4.90e-68 | 235 |
MS.gene034757.t1 | AT1G75430 | 42.123 | 292 | 148 | 7 | 155 | 438 | 10 | 288 | 9.20e-65 | 215 |
MS.gene034757.t1 | AT4G36870 | 49.180 | 244 | 106 | 4 | 161 | 395 | 312 | 546 | 8.92e-64 | 221 |
MS.gene034757.t1 | AT5G02030 | 42.378 | 328 | 147 | 7 | 100 | 417 | 123 | 418 | 2.02e-63 | 220 |
MS.gene034757.t1 | AT4G36870 | 48.760 | 242 | 106 | 4 | 161 | 393 | 312 | 544 | 1.63e-62 | 218 |
MS.gene034757.t1 | AT4G32980 | 37.224 | 317 | 163 | 8 | 126 | 426 | 154 | 450 | 1.59e-54 | 193 |
MS.gene034757.t1 | AT4G32980 | 37.224 | 317 | 163 | 8 | 126 | 426 | 154 | 450 | 1.59e-54 | 193 |
MS.gene034757.t1 | AT2G27990 | 37.117 | 326 | 158 | 7 | 107 | 419 | 205 | 496 | 1.79e-52 | 190 |
MS.gene034757.t1 | AT1G75430 | 37.885 | 227 | 125 | 6 | 155 | 373 | 10 | 228 | 6.08e-36 | 137 |
MS.gene034757.t1 | AT2G27990 | 30.357 | 280 | 148 | 7 | 107 | 373 | 205 | 450 | 3.25e-26 | 112 |
Find 171 sgRNAs with CRISPR-Local
Find 307 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTTCACGCGCCGCTGAATT+AGG | 0.123053 | 1.1:+44287773 | None:intergenic |
GCTTCAAACGGCTGTGTTTC+GGG | 0.133801 | 1.1:-44287659 | MS.gene034757:CDS |
GAACAAATTTCAATGAAATT+TGG | 0.179649 | 1.1:-44284687 | MS.gene034757:CDS |
TCTTATTCGCAGCTCTAATT+TGG | 0.208590 | 1.1:+44285742 | None:intergenic |
CCTCATTGTGACACATTATC+AGG | 0.219156 | 1.1:-44284498 | MS.gene034757:CDS |
TGCTTCAAACGGCTGTGTTT+CGG | 0.238102 | 1.1:-44287660 | MS.gene034757:CDS |
GTGGTGGAGGGAAGTGTTGC+CGG | 0.239922 | 1.1:+44287943 | None:intergenic |
GATGAAGTTGTTAATGTTAA+TGG | 0.243321 | 1.1:-44287581 | MS.gene034757:CDS |
TTCTTCCCAGTTGAATGTTT+TGG | 0.246221 | 1.1:+44284451 | None:intergenic |
TAAATGCTCGAGTTCGTCTT+TGG | 0.292125 | 1.1:-44285070 | MS.gene034757:CDS |
AATTGTGCGGCAAACCTCTT+TGG | 0.296812 | 1.1:+44284357 | None:intergenic |
TAATGTTAATGGTGGGATTA+AGG | 0.300957 | 1.1:-44287570 | MS.gene034757:CDS |
TAGAGCTGCGAATAAGAGTT+TGG | 0.301506 | 1.1:-44285736 | MS.gene034757:CDS |
ACTAATTTCATTGCTGGTTT+CGG | 0.310210 | 1.1:-44284618 | MS.gene034757:CDS |
AACCAAACTAATTTCATTGC+TGG | 0.316269 | 1.1:-44284624 | MS.gene034757:CDS |
AACCAGCAATGAAATTAGTT+TGG | 0.317050 | 1.1:+44284622 | None:intergenic |
CCGGCGTGTGGCGGCGGCTG+CGG | 0.320508 | 1.1:+44288001 | None:intergenic |
ATTATTAGTTGTTGTTTCAT+TGG | 0.321824 | 1.1:+44284710 | None:intergenic |
CTGTTTCTGTTCTTCGTGCT+TGG | 0.327008 | 1.1:-44285569 | MS.gene034757:CDS |
TCTGGTGTTGTTGGTGGTGG+AGG | 0.335542 | 1.1:+44287930 | None:intergenic |
ATATGGTACAGGTTTCAAAT+TGG | 0.342374 | 1.1:-44285097 | MS.gene034757:intron |
CTTCACGCGCCGCTGAATTA+GGG | 0.345703 | 1.1:+44287774 | None:intergenic |
ACAAAGAGCTATTCAACAAT+TGG | 0.347219 | 1.1:-44285643 | MS.gene034757:CDS |
GCCAAACCAAAACATTCAAC+TGG | 0.348082 | 1.1:-44284457 | MS.gene034757:CDS |
TGGTGGAGGGAAGTGTTGCC+GGG | 0.348095 | 1.1:+44287944 | None:intergenic |
GTGAATGTTAGAAACAATTC+AGG | 0.352767 | 1.1:-44284825 | MS.gene034757:CDS |
TTTGAACAAGTTGCAGGAAT+TGG | 0.356194 | 1.1:-44285843 | MS.gene034757:CDS |
TCCTCGTTTGAACAAGTTGC+AGG | 0.356397 | 1.1:-44285849 | MS.gene034757:CDS |
TAGAGATGGTTATTGTTTCA+TGG | 0.358531 | 1.1:-44284649 | MS.gene034757:CDS |
GGAAGTGTTGCCGGGGTGAT+TGG | 0.360547 | 1.1:+44287952 | None:intergenic |
TTGTTTGGAATTGAAACTTT+TGG | 0.360991 | 1.1:+44284896 | None:intergenic |
CTTATTTATGCCACAAAATC+CGG | 0.365359 | 1.1:+44284330 | None:intergenic |
GTTGGTGGTGGTGATGGAAA+TGG | 0.367432 | 1.1:-44287467 | MS.gene034757:CDS |
GGAACTCTTTCTTGTGGAGT+TGG | 0.373552 | 1.1:+44284936 | None:intergenic |
AACCATAGGAATGTCTTGTT+TGG | 0.375205 | 1.1:+44284881 | None:intergenic |
TTTCTAACATTCACACCAAT+AGG | 0.376813 | 1.1:+44284834 | None:intergenic |
ACACCATCAACTTCACCTAT+TGG | 0.384849 | 1.1:-44284849 | MS.gene034757:CDS |
ATTAGCGAAACAAATGAGTT+TGG | 0.384850 | 1.1:-44284420 | MS.gene034757:CDS |
TGGCGGCGGCTGCGGCGCGT+CGG | 0.387133 | 1.1:+44288009 | None:intergenic |
CTTTCGGGCAATCCTCTTTG+AGG | 0.389055 | 1.1:+44285594 | None:intergenic |
TGTTTAAAAGATGCAATTAC+CGG | 0.390768 | 1.1:-44285765 | MS.gene034757:CDS |
TGGAGATTGTTTGTAGGGCT+AGG | 0.390769 | 1.1:+44285799 | None:intergenic |
CAAAACAAACAGGACTTACT+AGG | 0.391251 | 1.1:-44285233 | MS.gene034757:CDS |
GGTTCTGTTGGTGGTGGTGA+TGG | 0.395350 | 1.1:-44287473 | MS.gene034757:CDS |
TCATGGTTCCTCGTTCGCTT+TGG | 0.399272 | 1.1:+44284762 | None:intergenic |
CATGAGGTTTCTGCTTTGCA+TGG | 0.403905 | 1.1:-44287839 | MS.gene034757:CDS |
AAGAACAGAAACAGATCTTT+CGG | 0.408106 | 1.1:+44285578 | None:intergenic |
GGAGAAGGTGGTTCTGTTGG+TGG | 0.408233 | 1.1:-44287482 | MS.gene034757:CDS |
TTCAGCTTCACGGAACTTGA+TGG | 0.410535 | 1.1:-44284801 | MS.gene034757:CDS |
GTTTGCCGCACAATTGTTAC+CGG | 0.411095 | 1.1:-44284349 | MS.gene034757:CDS |
TTGGATTCTGTTTCCGAGGT+TGG | 0.416477 | 1.1:+44284915 | None:intergenic |
TCATTGGACTTCACATGATT+CGG | 0.418133 | 1.1:+44284726 | None:intergenic |
CATTCAACTGGGAAGAAGAT+TGG | 0.418190 | 1.1:-44284445 | MS.gene034757:CDS |
AGGAAATCACCATCTGCATT+TGG | 0.421394 | 1.1:+44285868 | None:intergenic |
GCCGCTGAATTAGGGTCGGC+GGG | 0.424159 | 1.1:+44287782 | None:intergenic |
TGAAGCCACACGCGCTACTC+AGG | 0.424234 | 1.1:-44287756 | MS.gene034757:CDS |
AGCTTACATGCTCAAGGGTC+AGG | 0.425924 | 1.1:-44287722 | MS.gene034757:CDS |
AGTTCTGGTGTTGTTGGTGG+TGG | 0.426204 | 1.1:+44287927 | None:intergenic |
CGTGTTCCCATTGGTGGGTC+GGG | 0.428031 | 1.1:-44287689 | MS.gene034757:CDS |
AGTGGAGAAGGTGGTTCTGT+TGG | 0.435026 | 1.1:-44287485 | MS.gene034757:CDS |
ATTGCTTGGAGATTGTTTGT+AGG | 0.441182 | 1.1:+44285793 | None:intergenic |
TTGGGAGAAGATGATAGCTT+TGG | 0.441809 | 1.1:-44285717 | MS.gene034757:CDS |
CATGTGTTTGTCTGAATCCT+TGG | 0.446993 | 1.1:+44285260 | None:intergenic |
CCGCAGCCGCCGCCACACGC+CGG | 0.448334 | 1.1:-44288001 | MS.gene034757:CDS |
GAATCTTCAACTGCGGTTAG+TGG | 0.448461 | 1.1:-44287503 | MS.gene034757:CDS |
CACATGCTTGCAAAACAAAC+AGG | 0.449703 | 1.1:-44285243 | MS.gene034757:CDS |
CTGGTGTTGTTGGTGGTGGA+GGG | 0.450438 | 1.1:+44287931 | None:intergenic |
AGAGCTGCGAATAAGAGTTT+GGG | 0.451616 | 1.1:-44285735 | MS.gene034757:CDS |
AGCTTTGGTGGCAAAATTGA+AGG | 0.452290 | 1.1:-44285702 | MS.gene034757:CDS |
AATCTTCCGATTTCCTCCAT+TGG | 0.452740 | 1.1:+44284588 | None:intergenic |
AGAACAGAAACAGATCTTTC+GGG | 0.455936 | 1.1:+44285579 | None:intergenic |
TTGGTGGTGGTGATGGAAAT+GGG | 0.457024 | 1.1:-44287466 | MS.gene034757:CDS |
GAGGTCTCCAAGCATTATGA+TGG | 0.458928 | 1.1:+44285613 | None:intergenic |
TTGCTTGGAGATTGTTTGTA+GGG | 0.461175 | 1.1:+44285794 | None:intergenic |
TCACGCGCCACCACAGTTTG+TGG | 0.464248 | 1.1:-44287900 | MS.gene034757:CDS |
AGAGATGGTTATTGTTTCAT+GGG | 0.464621 | 1.1:-44284648 | MS.gene034757:CDS |
GGAGAAGATGATAGCTTTGG+TGG | 0.464797 | 1.1:-44285714 | MS.gene034757:CDS |
AATGGTGTTTCACTCACTCT+TGG | 0.469626 | 1.1:-44284525 | MS.gene034757:CDS |
TTTGCTTGATTTGTTGTCCT+CGG | 0.470961 | 1.1:+44284989 | None:intergenic |
CACGCGCCACCACAGTTTGT+GGG | 0.472024 | 1.1:-44287899 | MS.gene034757:CDS |
ATGTACATTTCCTCCACCAT+TGG | 0.475080 | 1.1:+44285044 | None:intergenic |
AGGTTACCGGCGTGTGGCGG+CGG | 0.475653 | 1.1:+44287995 | None:intergenic |
GGAGATTGTTTGTAGGGCTA+GGG | 0.477123 | 1.1:+44285800 | None:intergenic |
GCGTGTTCCCATTGGTGGGT+CGG | 0.478334 | 1.1:-44287690 | MS.gene034757:CDS |
CAAAGAGCTATTCAACAATT+GGG | 0.478974 | 1.1:-44285642 | MS.gene034757:CDS |
GAGATAAGTTCTGGTGTTGT+TGG | 0.480326 | 1.1:+44287921 | None:intergenic |
CAATATCCAATGGAGGAAAT+CGG | 0.481438 | 1.1:-44284594 | MS.gene034757:CDS |
GACGAACCCGACCCACCAAT+GGG | 0.487772 | 1.1:+44287683 | None:intergenic |
GACGCGCGTGTTCCCATTGG+TGG | 0.492130 | 1.1:-44287695 | MS.gene034757:CDS |
TCGGTGATTGAAGAATTTCA+TGG | 0.493060 | 1.1:+44284745 | None:intergenic |
GAAGGTGGTTCTGTTGGTGG+TGG | 0.495223 | 1.1:-44287479 | MS.gene034757:CDS |
GTGGCAAAATTGAAGGGTCT+AGG | 0.499962 | 1.1:-44285695 | MS.gene034757:CDS |
TTGTAGGGCTAGGGCAGTGT+AGG | 0.500467 | 1.1:+44285809 | None:intergenic |
GAATGATCCATCATAATGCT+TGG | 0.508715 | 1.1:-44285620 | MS.gene034757:CDS |
TTCCAAACAAGACATTCCTA+TGG | 0.509814 | 1.1:-44284883 | MS.gene034757:CDS |
CTGATTGTTCTGCCGAGAGC+GGG | 0.510732 | 1.1:+44287873 | None:intergenic |
AATGTACATGGAAGAGATGA+AGG | 0.518111 | 1.1:-44285030 | MS.gene034757:CDS |
CATAATAATTCAGAAATCCA+AGG | 0.518498 | 1.1:-44288091 | MS.gene034757:CDS |
CAATTCAGGATTCAGCTTCA+CGG | 0.521074 | 1.1:-44284811 | MS.gene034757:CDS |
GAAGCCACACGCGCTACTCA+GGG | 0.521534 | 1.1:-44287755 | MS.gene034757:CDS |
ACGCGCCACCACAGTTTGTG+GGG | 0.522432 | 1.1:-44287898 | MS.gene034757:CDS |
CGCCGCTGAATTAGGGTCGG+CGG | 0.525952 | 1.1:+44287781 | None:intergenic |
TCATTAAGCTTACATGCTCA+AGG | 0.530266 | 1.1:-44287728 | MS.gene034757:CDS |
TCATGAAAATGAGTGTTTGA+AGG | 0.530375 | 1.1:+44288056 | None:intergenic |
AGACGAACCCGACCCACCAA+TGG | 0.537440 | 1.1:+44287682 | None:intergenic |
ATGTGTTTGTCTGAATCCTT+GGG | 0.538305 | 1.1:+44285261 | None:intergenic |
ATAAGTTCTGGTGTTGTTGG+TGG | 0.538740 | 1.1:+44287924 | None:intergenic |
AACAGGACTTACTAGGAGCC+AGG | 0.541927 | 1.1:-44285226 | MS.gene034757:intron |
TCAACTGCGGTTAGTGGAGA+AGG | 0.547613 | 1.1:-44287497 | MS.gene034757:CDS |
TTATTATTACCTGAAAACCT+TGG | 0.548405 | 1.1:+44284546 | None:intergenic |
ATTCGCAGCTCTAATTTGGC+CGG | 0.548463 | 1.1:+44285746 | None:intergenic |
GTTAATTAACATGCTTGATG+AGG | 0.549695 | 1.1:-44287384 | MS.gene034757:intron |
TCGGGTTCGTCTGCTTCAAA+CGG | 0.552442 | 1.1:-44287671 | MS.gene034757:CDS |
CAGCCCCTGAGTAGCGCGTG+TGG | 0.553355 | 1.1:+44287751 | None:intergenic |
GTGGCGCGTGAGATAAGTTC+TGG | 0.557053 | 1.1:+44287912 | None:intergenic |
AGTTCGTCTTTGGAAACCAA+TGG | 0.560987 | 1.1:-44285060 | MS.gene034757:CDS |
GATGATAGACAAAGTAGAGA+TGG | 0.562540 | 1.1:-44284663 | MS.gene034757:CDS |
ACACCAATAGGTGAAGTTGA+TGG | 0.562831 | 1.1:+44284846 | None:intergenic |
GAGGACGCGCGTGTTCCCAT+TGG | 0.566554 | 1.1:-44287698 | MS.gene034757:CDS |
GAGTAATTGATGTAACCTGA+TGG | 0.567818 | 1.1:+44288031 | None:intergenic |
GAAGTTGTTAATGTTAATGG+TGG | 0.567999 | 1.1:-44287578 | MS.gene034757:CDS |
CTTCAAACGGCTGTGTTTCG+GGG | 0.569323 | 1.1:-44287658 | MS.gene034757:CDS |
TCTTTGGAAACCAATGGTGG+AGG | 0.574109 | 1.1:-44285054 | MS.gene034757:CDS |
GAAGGCCGTCAGAACCACCT+TGG | 0.574186 | 1.1:+44288074 | None:intergenic |
ATGAAGGATCAAGAGCTGAA+TGG | 0.575119 | 1.1:-44285014 | MS.gene034757:CDS |
GAAATCCAAGGTGGTTCTGA+CGG | 0.578996 | 1.1:-44288079 | MS.gene034757:CDS |
CGCGCATGCAGTACAACATG+TGG | 0.583615 | 1.1:-44287808 | MS.gene034757:CDS |
GTTTGATTTCAGTTATCCCA+AGG | 0.588172 | 1.1:-44285277 | MS.gene034757:intron |
TGTTGTACTGCATGCGCGGT+GGG | 0.595977 | 1.1:+44287813 | None:intergenic |
ACGCGCGTGTTCCCATTGGT+GGG | 0.596736 | 1.1:-44287694 | MS.gene034757:CDS |
AAGCAAGTCCAAAGCGAACG+AGG | 0.604196 | 1.1:-44284770 | MS.gene034757:CDS |
AATGGTGGAGGAAATGTACA+TGG | 0.609719 | 1.1:-44285042 | MS.gene034757:CDS |
TGTTGGAGAATCTTCAACTG+CGG | 0.611838 | 1.1:-44287510 | MS.gene034757:CDS |
CCCCGCCGACCCTAATTCAG+CGG | 0.612266 | 1.1:-44287783 | MS.gene034757:CDS |
TGGTTTCGGTCAATATCCAA+TGG | 0.615136 | 1.1:-44284604 | MS.gene034757:CDS |
TCGTCTTTGGAAACCAATGG+TGG | 0.617524 | 1.1:-44285057 | MS.gene034757:CDS |
TCGGCAGAACAATCAGTACA+TGG | 0.621271 | 1.1:-44287866 | MS.gene034757:CDS |
ACGCGCCGCTGAATTAGGGT+CGG | 0.621487 | 1.1:+44287778 | None:intergenic |
TTTCATCGAAGGATCGTCAT+CGG | 0.623127 | 1.1:+44284962 | None:intergenic |
GAGGTTGGAACTCTTTCTTG+TGG | 0.623921 | 1.1:+44284930 | None:intergenic |
GCTTTGGTGGCAAAATTGAA+GGG | 0.625009 | 1.1:-44285701 | MS.gene034757:CDS |
CGCGCCACCACAGTTTGTGG+GGG | 0.626295 | 1.1:-44287897 | MS.gene034757:CDS |
AAGTTGTTAATGTTAATGGT+GGG | 0.628751 | 1.1:-44287577 | MS.gene034757:CDS |
GCAAAGCAGAAACCTCATGA+TGG | 0.629561 | 1.1:+44287843 | None:intergenic |
CCAAACCAAAACATTCAACT+GGG | 0.629955 | 1.1:-44284456 | MS.gene034757:CDS |
ATATCACAACCAAATGCAGA+TGG | 0.632389 | 1.1:-44285877 | MS.gene034757:CDS |
CATTAAGCTTACATGCTCAA+GGG | 0.634278 | 1.1:-44287727 | MS.gene034757:CDS |
CACATGTTGTACTGCATGCG+CGG | 0.634344 | 1.1:+44287809 | None:intergenic |
ATCAGTACATGGCCATCATG+AGG | 0.634995 | 1.1:-44287855 | MS.gene034757:CDS |
ATGCGGAACAATTTGCACCA+AGG | 0.636094 | 1.1:-44284563 | MS.gene034757:CDS |
TCCTGCAACTTGTTCAAACG+AGG | 0.638911 | 1.1:+44285848 | None:intergenic |
TCAACATGCAGAATCCAAAG+AGG | 0.639986 | 1.1:-44284371 | MS.gene034757:CDS |
ACTGATTGTTCTGCCGAGAG+CGG | 0.645804 | 1.1:+44287872 | None:intergenic |
GGTGTTGAAACTGAAACCAT+AGG | 0.645975 | 1.1:+44284867 | None:intergenic |
ACAAGGTTACCGGCGTGTGG+CGG | 0.649540 | 1.1:+44287992 | None:intergenic |
AAAACAAGGTTACCGGCGTG+TGG | 0.650178 | 1.1:+44287989 | None:intergenic |
ACTGCGGTTAGTGGAGAAGG+TGG | 0.650559 | 1.1:-44287494 | MS.gene034757:CDS |
GGTGGAGGGAAGTGTTGCCG+GGG | 0.656423 | 1.1:+44287945 | None:intergenic |
TCAAGAGCTGAATGGTTCCG+AGG | 0.663324 | 1.1:-44285006 | MS.gene034757:CDS |
GGAAATCGGAAGATTTGATG+CGG | 0.664371 | 1.1:-44284580 | MS.gene034757:CDS |
CCTGATAATGTGTCACAATG+AGG | 0.665244 | 1.1:+44284498 | None:intergenic |
AACTCAGCTGCCAATCACCC+CGG | 0.666884 | 1.1:-44287962 | MS.gene034757:CDS |
ACATGCTCAAGGGTCAGGCG+AGG | 0.668836 | 1.1:-44287717 | MS.gene034757:CDS |
ACAAGAAAGAGTTCCAACCT+CGG | 0.675024 | 1.1:-44284928 | MS.gene034757:CDS |
AAAATCCGGTAACAATTGTG+CGG | 0.678724 | 1.1:+44284344 | None:intergenic |
AAGCCACACGCGCTACTCAG+GGG | 0.685417 | 1.1:-44287754 | MS.gene034757:CDS |
ATGTTGTACTGCATGCGCGG+TGG | 0.691285 | 1.1:+44287812 | None:intergenic |
AATGCTTGGAGACCTCAAAG+AGG | 0.697679 | 1.1:-44285606 | MS.gene034757:CDS |
TTTCGGTCAATATCCAATGG+AGG | 0.697787 | 1.1:-44284601 | MS.gene034757:CDS |
AATAATTCAGAAATCCAAGG+TGG | 0.720775 | 1.1:-44288088 | MS.gene034757:CDS |
CCGCTGAATTAGGGTCGGCG+GGG | 0.731123 | 1.1:+44287783 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAAGGATAAAAAAA+CGG | + | chr1.1:44285939-44285920 | None:intergenic | 10.0% |
!! | AAAAAAAGGATAAAAAAAAA+CGG | - | chr1.1:44285922-44285941 | MS.gene034757:intron | 10.0% |
!! | AAAAAAAGGATAAAAAAAAA+CGG | + | chr1.1:44285941-44285922 | None:intergenic | 10.0% |
!! | CAAAAAAAAAAAACAATATT+AGG | + | chr1.1:44285148-44285167 | None:intergenic | 10.0% |
!! | TTAAAAAATTACTAAATTGA+CGG | + | chr1.1:44287036-44287055 | None:intergenic | 10.0% |
!!! | AAATCTAAAAACTAAAATTT+TGG | + | chr1.1:44286288-44286307 | None:intergenic | 10.0% |
!!! | ACTCAAATTTATTTAATTTT+TGG | - | chr1.1:44285458-44285477 | MS.gene034757:intron | 10.0% |
!!! | ATTTTTCTTTTTTTTTTTTG+TGG | + | chr1.1:44286422-44286441 | None:intergenic | 10.0% |
!!! | TAAATTAACATTTTAGTTTT+TGG | - | chr1.1:44286966-44286985 | MS.gene034757:intron | 10.0% |
!!! | TTTTTATCCTTTTTTTTTTA+AGG | - | chr1.1:44285785-44285804 | MS.gene034757:CDS | 10.0% |
!!! | TTTTTATCCTTTTTTTTTTA+AGG | + | chr1.1:44285804-44285785 | None:intergenic | 10.0% |
!!! | TTTTTTATCCTTTTTTTTTA+AGG | - | chr1.1:44286074-44286093 | MS.gene034757:intron | 10.0% |
!! | AATTGTTTCCTTAAAAAAAA+AGG | + | chr1.1:44285926-44285907 | None:intergenic | 15.0% |
!! | ATACTAAAAATGAATTAATG+TGG | - | chr1.1:44286495-44286514 | MS.gene034757:intron | 15.0% |
!! | ATTGTTTCCTTAAAAAAAAA+AGG | - | chr1.1:44285908-44285927 | MS.gene034757:intron | 15.0% |
!! | ATTGTTTCCTTAAAAAAAAA+AGG | + | chr1.1:44285927-44285908 | None:intergenic | 15.0% |
!! | TGTTTCCTTAAAAAAAAAAA+CGG | + | chr1.1:44286181-44286200 | None:intergenic | 15.0% |
!!! | AGAATTTATGTTTTTTAGAA+TGG | - | chr1.1:44285356-44285375 | MS.gene034757:intron | 15.0% |
!!! | GAGTTAATTAAATTTAGTTT+TGG | - | chr1.1:44285088-44285107 | MS.gene034757:CDS | 15.0% |
!!! | TAAAAACTAAAATTTTGGAA+AGG | + | chr1.1:44286283-44286302 | None:intergenic | 15.0% |
!!! | TCTATCATTTTAAAATTCTA+AGG | - | chr1.1:44286322-44286341 | MS.gene034757:intron | 15.0% |
!!! | TTACTTTTTAAGTATGATTA+AGG | - | chr1.1:44285324-44285343 | MS.gene034757:intron | 15.0% |
!!! | TTTTATGATACTATTAGAAA+AGG | - | chr1.1:44286936-44286955 | MS.gene034757:intron | 15.0% |
!! | AATTTGATAGGAACTAAATT+TGG | + | chr1.1:44285185-44285204 | None:intergenic | 20.0% |
!! | GAACAAATTTCAATGAAATT+TGG | - | chr1.1:44287754-44287773 | MS.gene034757:CDS | 20.0% |
!! | GCATAAAAAAAAAATATGCA+AGG | - | chr1.1:44285644-44285663 | MS.gene034757:CDS | 20.0% |
!! | TATTGATCATGTTAACAATA+TGG | - | chr1.1:44287327-44287346 | MS.gene034757:intron | 20.0% |
!! | TTAATTCATGTTTGATTCTA+TGG | + | chr1.1:44285566-44285585 | None:intergenic | 20.0% |
!!! | ATTATTAGTTGTTGTTTCAT+TGG | + | chr1.1:44287734-44287753 | None:intergenic | 20.0% |
!!! | ATTTCTTGCAAATACTTTTA+TGG | + | chr1.1:44286380-44286399 | None:intergenic | 20.0% |
!!! | CTTAAAAAAAAAAACGGATT+CGG | + | chr1.1:44286175-44286194 | None:intergenic | 20.0% |
! | AAAAAAAAATATGCAAGGTC+CGG | - | chr1.1:44285649-44285668 | MS.gene034757:CDS | 25.0% |
! | AAGTTGTTAATGTTAATGGT+GGG | - | chr1.1:44284864-44284883 | MS.gene034757:CDS | 25.0% |
! | ATGAATTAATGTGGTTTCTT+TGG | - | chr1.1:44286504-44286523 | MS.gene034757:intron | 25.0% |
! | CATAATAATTCAGAAATCCA+AGG | - | chr1.1:44284350-44284369 | MS.gene034757:CDS | 25.0% |
! | CTTGAAAGAACAAATTTGAT+AGG | + | chr1.1:44285197-44285216 | None:intergenic | 25.0% |
! | GATGAAGTTGTTAATGTTAA+TGG | - | chr1.1:44284860-44284879 | MS.gene034757:CDS | 25.0% |
! | TGTTTAAAAGATGCAATTAC+CGG | - | chr1.1:44286676-44286695 | MS.gene034757:intron | 25.0% |
! | TTATTATTACCTGAAAACCT+TGG | + | chr1.1:44287898-44287917 | None:intergenic | 25.0% |
! | TTTGAGAAAAATAAGGTTGT+TGG | - | chr1.1:44284914-44284933 | MS.gene034757:CDS | 25.0% |
!! | AAAGGATAAAAAAACGGATT+CGG | + | chr1.1:44286067-44286086 | None:intergenic | 25.0% |
!! | AGGATAAAAAAAAACGGATT+CGG | - | chr1.1:44285928-44285947 | MS.gene034757:intron | 25.0% |
!! | AGGATAAAAAAAAACGGATT+CGG | + | chr1.1:44285947-44285928 | None:intergenic | 25.0% |
!! | GAATGGTTTTTATGCAAAAT+AGG | - | chr1.1:44285404-44285423 | MS.gene034757:intron | 25.0% |
!! | GATATATTCAGGTCTTTTAT+TGG | - | chr1.1:44287120-44287139 | MS.gene034757:intron | 25.0% |
!! | TTTTAAACATCGAAATTGCT+TGG | + | chr1.1:44286665-44286684 | None:intergenic | 25.0% |
!!! | ACTAAAATTTTGGAAAGGAA+AGG | + | chr1.1:44286278-44286297 | None:intergenic | 25.0% |
!!! | AGGTTTTCAGGTAATAATAA+TGG | - | chr1.1:44287898-44287917 | MS.gene034757:CDS | 25.0% |
!!! | ATTGGTAATTTTTTTTGTGG+TGG | + | chr1.1:44286044-44286063 | None:intergenic | 25.0% |
!!! | CGAATCCGTTTTTTTTTTTA+AGG | - | chr1.1:44286173-44286192 | MS.gene034757:intron | 25.0% |
!!! | GAAGAGTTTTGAGAAAAATA+AGG | - | chr1.1:44284907-44284926 | MS.gene034757:CDS | 25.0% |
!!! | GTTCATTGGTTTTTTTTTTG+TGG | + | chr1.1:44286142-44286161 | None:intergenic | 25.0% |
!!! | TGTTTTTTTGACAGATAGAA+TGG | - | chr1.1:44285387-44285406 | MS.gene034757:intron | 25.0% |
!!! | TTGTTTGGAATTGAAACTTT+TGG | + | chr1.1:44287548-44287567 | None:intergenic | 25.0% |
AAAAAAAATATGCAAGGTCC+GGG | - | chr1.1:44285650-44285669 | MS.gene034757:CDS | 30.0% | |
AACCAAACTAATTTCATTGC+TGG | - | chr1.1:44287817-44287836 | MS.gene034757:CDS | 30.0% | |
AACCAGCAATGAAATTAGTT+TGG | + | chr1.1:44287822-44287841 | None:intergenic | 30.0% | |
AAGAACAGAAACAGATCTTT+CGG | + | chr1.1:44286866-44286885 | None:intergenic | 30.0% | |
AATAATTCAGAAATCCAAGG+TGG | - | chr1.1:44284353-44284372 | MS.gene034757:CDS | 30.0% | |
ACAAAGAGCTATTCAACAAT+TGG | - | chr1.1:44286798-44286817 | MS.gene034757:intron | 30.0% | |
AGAGATGGTTATTGTTTCAT+GGG | - | chr1.1:44287793-44287812 | MS.gene034757:CDS | 30.0% | |
AGTTGGTCATGGTTTAATAA+AGG | + | chr1.1:44285589-44285608 | None:intergenic | 30.0% | |
ATATGGTACAGGTTTCAAAT+TGG | - | chr1.1:44287344-44287363 | MS.gene034757:intron | 30.0% | |
ATTAGCGAAACAAATGAGTT+TGG | - | chr1.1:44288021-44288040 | MS.gene034757:CDS | 30.0% | |
ATTCATGTTTGATTCTATGG+TGG | + | chr1.1:44285563-44285582 | None:intergenic | 30.0% | |
CAAAGAGCTATTCAACAATT+GGG | - | chr1.1:44286799-44286818 | MS.gene034757:intron | 30.0% | |
CACTTAATAAAGAAGTAAGG+AGG | + | chr1.1:44287244-44287263 | None:intergenic | 30.0% | |
CGACACTTAATAAAGAAGTA+AGG | + | chr1.1:44287247-44287266 | None:intergenic | 30.0% | |
GAAGTTGTTAATGTTAATGG+TGG | - | chr1.1:44284863-44284882 | MS.gene034757:CDS | 30.0% | |
GTGAATGTTAGAAACAATTC+AGG | - | chr1.1:44287616-44287635 | MS.gene034757:CDS | 30.0% | |
GTTAATTAACATGCTTGATG+AGG | - | chr1.1:44285057-44285076 | MS.gene034757:CDS | 30.0% | |
TAGAGATGGTTATTGTTTCA+TGG | - | chr1.1:44287792-44287811 | MS.gene034757:CDS | 30.0% | |
TCATGAAAATGAGTGTTTGA+AGG | + | chr1.1:44284388-44284407 | None:intergenic | 30.0% | |
TCATGTTAACAATATGGTAC+AGG | - | chr1.1:44287333-44287352 | MS.gene034757:intron | 30.0% | |
TCATTGAAGTCGATATATTC+AGG | - | chr1.1:44287109-44287128 | MS.gene034757:intron | 30.0% | |
TTTCTAACATTCACACCAAT+AGG | + | chr1.1:44287610-44287629 | None:intergenic | 30.0% | |
! | AAAAAAAAACGGATTCGGAT+TGG | + | chr1.1:44285952-44285933 | None:intergenic | 30.0% |
! | AAAAGTATAGCGAGTACTTA+CGG | + | chr1.1:44286919-44286938 | None:intergenic | 30.0% |
! | ATAAAAAAACGGATTCGGAT+TGG | + | chr1.1:44286062-44286081 | None:intergenic | 30.0% |
! | GTTCTTTCAAGTAATTGAGT+TGG | - | chr1.1:44285206-44285225 | MS.gene034757:intron | 30.0% |
! | TAATGTTAATGGTGGGATTA+AGG | - | chr1.1:44284871-44284890 | MS.gene034757:CDS | 30.0% |
!! | AAAATTTTGGAAAGGAAAGG+AGG | + | chr1.1:44286275-44286294 | None:intergenic | 30.0% |
!! | ACTAATTTCATTGCTGGTTT+CGG | - | chr1.1:44287823-44287842 | MS.gene034757:CDS | 30.0% |
!!! | ATTGGTTTTTTTTTTGTGGC+CGG | + | chr1.1:44286138-44286157 | None:intergenic | 30.0% |
!!! | CGGATTGGTAATTTTTTTTG+TGG | + | chr1.1:44286047-44286066 | None:intergenic | 30.0% |
!!! | GTTTTTGGAATTGAAAGAGT+CGG | - | chr1.1:44286981-44287000 | MS.gene034757:intron | 30.0% |
!!! | TCATGGGTTTTTTTTTGTGA+TGG | + | chr1.1:44285740-44285759 | None:intergenic | 30.0% |
!!! | TTTGGATTGTTTTGGTTTGA+AGG | - | chr1.1:44286522-44286541 | MS.gene034757:intron | 30.0% |
AAAAAAATATGCAAGGTCCG+GGG | - | chr1.1:44285651-44285670 | MS.gene034757:CDS | 35.0% | |
AAAATCCGGTAACAATTGTG+CGG | + | chr1.1:44288100-44288119 | None:intergenic | 35.0% | |
AAACAATTACCAATCCTGCA+AGG | - | chr1.1:44285808-44285827 | MS.gene034757:CDS | 35.0% | |
AAACAATTACCAATCCTGCA+AGG | + | chr1.1:44285827-44285808 | None:intergenic | 35.0% | |
AATGTACATGGAAGAGATGA+AGG | - | chr1.1:44287411-44287430 | MS.gene034757:CDS | 35.0% | |
ACGGACGTTAAACTATTCAA+AGG | + | chr1.1:44287017-44287036 | None:intergenic | 35.0% | |
AGAACAGAAACAGATCTTTC+GGG | + | chr1.1:44286865-44286884 | None:intergenic | 35.0% | |
ATATCACAACCAAATGCAGA+TGG | - | chr1.1:44286564-44286583 | MS.gene034757:intron | 35.0% | |
ATGTGTTTGTCTGAATCCTT+GGG | + | chr1.1:44287183-44287202 | None:intergenic | 35.0% | |
ATTGCTTGGAGATTGTTTGT+AGG | + | chr1.1:44286651-44286670 | None:intergenic | 35.0% | |
CAAAACAAACAGGACTTACT+AGG | - | chr1.1:44287208-44287227 | MS.gene034757:intron | 35.0% | |
CAATATCCAATGGAGGAAAT+CGG | - | chr1.1:44287847-44287866 | MS.gene034757:CDS | 35.0% | |
CATTAAGCTTACATGCTCAA+GGG | - | chr1.1:44284714-44284733 | MS.gene034757:CDS | 35.0% | |
CCAAACCAAAACATTCAACT+GGG | - | chr1.1:44287985-44288004 | MS.gene034757:CDS | 35.0% | |
GAATGATCCATCATAATGCT+TGG | - | chr1.1:44286821-44286840 | MS.gene034757:intron | 35.0% | |
GAGTAATTGATGTAACCTGA+TGG | + | chr1.1:44284413-44284432 | None:intergenic | 35.0% | |
GATGATAGACAAAGTAGAGA+TGG | - | chr1.1:44287778-44287797 | MS.gene034757:CDS | 35.0% | |
GTTGAGAAAAACAAGGTTAC+CGG | + | chr1.1:44284462-44284481 | None:intergenic | 35.0% | |
TCATTAAGCTTACATGCTCA+AGG | - | chr1.1:44284713-44284732 | MS.gene034757:CDS | 35.0% | |
TCATTGGACTTCACATGATT+CGG | + | chr1.1:44287718-44287737 | None:intergenic | 35.0% | |
TCGGTGATTGAAGAATTTCA+TGG | + | chr1.1:44287699-44287718 | None:intergenic | 35.0% | |
TGTGCTAGTAACAAGTGAAA+TGG | - | chr1.1:44286243-44286262 | MS.gene034757:intron | 35.0% | |
TTCCAAACAAGACATTCCTA+TGG | - | chr1.1:44287558-44287577 | MS.gene034757:CDS | 35.0% | |
TTGCTTGGAGATTGTTTGTA+GGG | + | chr1.1:44286650-44286669 | None:intergenic | 35.0% | |
TTTGAACAAGTTGCAGGAAT+TGG | - | chr1.1:44286598-44286617 | MS.gene034757:intron | 35.0% | |
! | AACCATAGGAATGTCTTGTT+TGG | + | chr1.1:44287563-44287582 | None:intergenic | 35.0% |
! | ACAATTGTTACCGGATTTTG+TGG | - | chr1.1:44288101-44288120 | MS.gene034757:CDS | 35.0% |
! | CTCATTTTCATGAATCCATC+AGG | - | chr1.1:44284395-44284414 | MS.gene034757:CDS | 35.0% |
! | GTGGTTTCTTTGGATTGTTT+TGG | - | chr1.1:44286514-44286533 | MS.gene034757:intron | 35.0% |
! | GTTTGATTTCAGTTATCCCA+AGG | - | chr1.1:44287164-44287183 | MS.gene034757:intron | 35.0% |
! | TCTTATTCGCAGCTCTAATT+TGG | + | chr1.1:44286702-44286721 | None:intergenic | 35.0% |
! | TTCTTCCCAGTTGAATGTTT+TGG | + | chr1.1:44287993-44288012 | None:intergenic | 35.0% |
!! | CAAGTAATTGAGTTGGTAAC+TGG | - | chr1.1:44285213-44285232 | MS.gene034757:intron | 35.0% |
!! | TCGGATTGGTAATTGTTCAT+GGG | + | chr1.1:44285756-44285775 | None:intergenic | 35.0% |
!! | TCGGATTGGTAATTGTTCAT+TGG | + | chr1.1:44285756-44285775 | None:intergenic | 35.0% |
!! | TTCGGATTGGTAATTGTTCA+TGG | + | chr1.1:44285757-44285776 | None:intergenic | 35.0% |
!! | TTTGCTTGATTTGTTGTCCT+CGG | + | chr1.1:44287455-44287474 | None:intergenic | 35.0% |
!!! | AATTTTTTTTGTGGTGGCTG+AGG | + | chr1.1:44286038-44286057 | None:intergenic | 35.0% |
!!! | GGGTTTTTTTTTGTGATGGT+CGG | + | chr1.1:44285736-44285755 | None:intergenic | 35.0% |
!!! | GGTTTTTTTTTGTGATGGTC+GGG | + | chr1.1:44285735-44285754 | None:intergenic | 35.0% |
!!! | GTTTTTTTTTGTGATGGTCG+GGG | + | chr1.1:44285734-44285753 | None:intergenic | 35.0% |
!!! | TTGGTTTTTTTTTTGTGGCC+GGG | + | chr1.1:44286137-44286156 | None:intergenic | 35.0% |
AATCTTCCGATTTCCTCCAT+TGG | + | chr1.1:44287856-44287875 | None:intergenic | 40.0% | |
AATGGTGTTTCACTCACTCT+TGG | - | chr1.1:44287916-44287935 | MS.gene034757:CDS | 40.0% | |
ACAAGAAAGAGTTCCAACCT+CGG | - | chr1.1:44287513-44287532 | MS.gene034757:CDS | 40.0% | |
ACACCAATAGGTGAAGTTGA+TGG | + | chr1.1:44287598-44287617 | None:intergenic | 40.0% | |
ACACCATCAACTTCACCTAT+TGG | - | chr1.1:44287592-44287611 | MS.gene034757:CDS | 40.0% | |
AGAGCTGCGAATAAGAGTTT+GGG | - | chr1.1:44286706-44286725 | MS.gene034757:intron | 40.0% | |
AGGAAATCACCATCTGCATT+TGG | + | chr1.1:44286576-44286595 | None:intergenic | 40.0% | |
ATGAAGGATCAAGAGCTGAA+TGG | - | chr1.1:44287427-44287446 | MS.gene034757:CDS | 40.0% | |
ATGCTCGCACTCGTTATTAA+AGG | + | chr1.1:44287275-44287294 | None:intergenic | 40.0% | |
ATGTACATTTCCTCCACCAT+TGG | + | chr1.1:44287400-44287419 | None:intergenic | 40.0% | |
CAAAAAATTTGTGGTGGCTG+AGG | - | chr1.1:44285856-44285875 | MS.gene034757:CDS | 40.0% | |
CAATTCAGGATTCAGCTTCA+CGG | - | chr1.1:44287630-44287649 | MS.gene034757:CDS | 40.0% | |
CACATGCTTGCAAAACAAAC+AGG | - | chr1.1:44287198-44287217 | MS.gene034757:intron | 40.0% | |
CAGCCACCACAAAAAATTTG+TGG | - | chr1.1:44285847-44285866 | MS.gene034757:CDS | 40.0% | |
CATGTGTTTGTCTGAATCCT+TGG | + | chr1.1:44287184-44287203 | None:intergenic | 40.0% | |
CATTCAACTGGGAAGAAGAT+TGG | - | chr1.1:44287996-44288015 | MS.gene034757:CDS | 40.0% | |
CCACCACAAAAAATTTGTGG+TGG | - | chr1.1:44285850-44285869 | MS.gene034757:CDS | 40.0% | |
CCTCATTGTGACACATTATC+AGG | - | chr1.1:44287943-44287962 | MS.gene034757:CDS | 40.0% | |
GCCAAACCAAAACATTCAAC+TGG | - | chr1.1:44287984-44288003 | MS.gene034757:CDS | 40.0% | |
GGAAATCGGAAGATTTGATG+CGG | - | chr1.1:44287861-44287880 | MS.gene034757:CDS | 40.0% | |
GTTGTGATCACTACTAGGAT+TGG | + | chr1.1:44286208-44286227 | None:intergenic | 40.0% | |
TAAATGCTCGAGTTCGTCTT+TGG | - | chr1.1:44287371-44287390 | MS.gene034757:intron | 40.0% | |
TAGAGCTGCGAATAAGAGTT+TGG | - | chr1.1:44286705-44286724 | MS.gene034757:intron | 40.0% | |
TCAACATGCAGAATCCAAAG+AGG | - | chr1.1:44288070-44288089 | MS.gene034757:CDS | 40.0% | |
TGGTTTCGGTCAATATCCAA+TGG | - | chr1.1:44287837-44287856 | MS.gene034757:CDS | 40.0% | |
TGTGAGTTGTGATCACTACT+AGG | + | chr1.1:44286213-44286232 | None:intergenic | 40.0% | |
TGTTGGAGAATCTTCAACTG+CGG | - | chr1.1:44284931-44284950 | MS.gene034757:CDS | 40.0% | |
TTGGGAGAAGATGATAGCTT+TGG | - | chr1.1:44286724-44286743 | MS.gene034757:intron | 40.0% | |
TTTCATCGAAGGATCGTCAT+CGG | + | chr1.1:44287482-44287501 | None:intergenic | 40.0% | |
TTTCGGTCAATATCCAATGG+AGG | - | chr1.1:44287840-44287859 | MS.gene034757:CDS | 40.0% | |
! | AATGGTGGAGGAAATGTACA+TGG | - | chr1.1:44287399-44287418 | MS.gene034757:CDS | 40.0% |
! | ACTTTTGGATTCTGTTTCCG+AGG | + | chr1.1:44287533-44287552 | None:intergenic | 40.0% |
! | AGCTTTGGTGGCAAAATTGA+AGG | - | chr1.1:44286739-44286758 | MS.gene034757:intron | 40.0% |
! | AGTTCGTCTTTGGAAACCAA+TGG | - | chr1.1:44287381-44287400 | MS.gene034757:intron | 40.0% |
! | CAATTTGCACCAAGGTTTTC+AGG | - | chr1.1:44287886-44287905 | MS.gene034757:CDS | 40.0% |
! | CAGCTGAGTTGAGAAAAACA+AGG | + | chr1.1:44284469-44284488 | None:intergenic | 40.0% |
! | CCTGATAATGTGTCACAATG+AGG | + | chr1.1:44287946-44287965 | None:intergenic | 40.0% |
! | GCTTTGGTGGCAAAATTGAA+GGG | - | chr1.1:44286740-44286759 | MS.gene034757:intron | 40.0% |
! | GGTGTTGAAACTGAAACCAT+AGG | + | chr1.1:44287577-44287596 | None:intergenic | 40.0% |
!! | ATAAGTTCTGGTGTTGTTGG+TGG | + | chr1.1:44284520-44284539 | None:intergenic | 40.0% |
!! | GAGATAAGTTCTGGTGTTGT+TGG | + | chr1.1:44284523-44284542 | None:intergenic | 40.0% |
!!! | CAAATTTTTTGTGGTGGCTG+AGG | + | chr1.1:44285847-44285866 | None:intergenic | 40.0% |
!!! | CAGCCACCACAAATTTTTTG+TGG | + | chr1.1:44285856-44285875 | None:intergenic | 40.0% |
!!! | CCACCACAAATTTTTTGTGG+TGG | + | chr1.1:44285853-44285872 | None:intergenic | 40.0% |
!!! | CCCAGTTGAATGTTTTGGTT+TGG | + | chr1.1:44287988-44288007 | None:intergenic | 40.0% |
!!! | GGATTGTTTTGGTTTGAAGG+TGG | - | chr1.1:44286525-44286544 | MS.gene034757:intron | 40.0% |
!!! | TGGTTTTTTTTTTGTGGCCG+GGG | + | chr1.1:44286136-44286155 | None:intergenic | 40.0% |
AAAGAAGTAAGGAGGTCACC+TGG | + | chr1.1:44287236-44287255 | None:intergenic | 45.0% | |
AATGCTTGGAGACCTCAAAG+AGG | - | chr1.1:44286835-44286854 | MS.gene034757:intron | 45.0% | |
AATTGTGCGGCAAACCTCTT+TGG | + | chr1.1:44288087-44288106 | None:intergenic | 45.0% | |
ATCAGTACATGGCCATCATG+AGG | - | chr1.1:44284586-44284605 | MS.gene034757:CDS | 45.0% | |
ATGCGGAACAATTTGCACCA+AGG | - | chr1.1:44287878-44287897 | MS.gene034757:CDS | 45.0% | |
ATTACCAATCCTGCAAGGTC+CGG | - | chr1.1:44285813-44285832 | MS.gene034757:CDS | 45.0% | |
ATTACCAATCCTGCAAGGTC+CGG | + | chr1.1:44285832-44285813 | None:intergenic | 45.0% | |
CATGAGGTTTCTGCTTTGCA+TGG | - | chr1.1:44284602-44284621 | MS.gene034757:CDS | 45.0% | |
GAATCTTCAACTGCGGTTAG+TGG | - | chr1.1:44284938-44284957 | MS.gene034757:CDS | 45.0% | |
GAGGTCTCCAAGCATTATGA+TGG | + | chr1.1:44286831-44286850 | None:intergenic | 45.0% | |
GAGGTTGGAACTCTTTCTTG+TGG | + | chr1.1:44287514-44287533 | None:intergenic | 45.0% | |
GCAAAGCAGAAACCTCATGA+TGG | + | chr1.1:44284601-44284620 | None:intergenic | 45.0% | |
GGAACTCTTTCTTGTGGAGT+TGG | + | chr1.1:44287508-44287527 | None:intergenic | 45.0% | |
GGAGATTGTTTGTAGGGCTA+GGG | + | chr1.1:44286644-44286663 | None:intergenic | 45.0% | |
GTATAGCGAGTACTTACGGA+TGG | + | chr1.1:44286915-44286934 | None:intergenic | 45.0% | |
GTGGCAAAATTGAAGGGTCT+AGG | - | chr1.1:44286746-44286765 | MS.gene034757:intron | 45.0% | |
GTTTGCCGCACAATTGTTAC+CGG | - | chr1.1:44288092-44288111 | MS.gene034757:CDS | 45.0% | |
TCCTCGTTTGAACAAGTTGC+AGG | - | chr1.1:44286592-44286611 | MS.gene034757:intron | 45.0% | |
TCGGCAGAACAATCAGTACA+TGG | - | chr1.1:44284575-44284594 | MS.gene034757:CDS | 45.0% | |
TGCTTCAAACGGCTGTGTTT+CGG | - | chr1.1:44284781-44284800 | MS.gene034757:CDS | 45.0% | |
TGGAGATTGTTTGTAGGGCT+AGG | + | chr1.1:44286645-44286664 | None:intergenic | 45.0% | |
TTCAGCTTCACGGAACTTGA+TGG | - | chr1.1:44287640-44287659 | MS.gene034757:CDS | 45.0% | |
TTGGATTCTGTTTCCGAGGT+TGG | + | chr1.1:44287529-44287548 | None:intergenic | 45.0% | |
! | ATTCGCAGCTCTAATTTGGC+CGG | + | chr1.1:44286698-44286717 | None:intergenic | 45.0% |
! | TCCTGCAACTTGTTCAAACG+AGG | + | chr1.1:44286596-44286615 | None:intergenic | 45.0% |
! | TCGTCTTTGGAAACCAATGG+TGG | - | chr1.1:44287384-44287403 | MS.gene034757:intron | 45.0% |
! | TCTTTGGAAACCAATGGTGG+AGG | - | chr1.1:44287387-44287406 | MS.gene034757:CDS | 45.0% |
! | TGAGCTTAGCTCAGTTGGTA+TGG | - | chr1.1:44285616-44285635 | MS.gene034757:CDS | 45.0% |
!! | CTGTTTCTGTTCTTCGTGCT+TGG | - | chr1.1:44286872-44286891 | MS.gene034757:intron | 45.0% |
!! | GAAATCCAAGGTGGTTCTGA+CGG | - | chr1.1:44284362-44284381 | MS.gene034757:CDS | 45.0% |
!! | GGAGAAGATGATAGCTTTGG+TGG | - | chr1.1:44286727-44286746 | MS.gene034757:intron | 45.0% |
!! | TTGGTGGTGGTGATGGAAAT+GGG | - | chr1.1:44284975-44284994 | MS.gene034757:CDS | 45.0% |
!!! | GGAGTTGGTGTTTTCATCGA+AGG | + | chr1.1:44287493-44287512 | None:intergenic | 45.0% |
AAAACAAGGTTACCGGCGTG+TGG | + | chr1.1:44284455-44284474 | None:intergenic | 50.0% | |
AACAGGACTTACTAGGAGCC+AGG | - | chr1.1:44287215-44287234 | MS.gene034757:intron | 50.0% | |
AAGCAAGTCCAAAGCGAACG+AGG | - | chr1.1:44287671-44287690 | MS.gene034757:CDS | 50.0% | |
ACTGATTGTTCTGCCGAGAG+CGG | + | chr1.1:44284572-44284591 | None:intergenic | 50.0% | |
AGCTTACATGCTCAAGGGTC+AGG | - | chr1.1:44284719-44284738 | MS.gene034757:CDS | 50.0% | |
CACATGTTGTACTGCATGCG+CGG | + | chr1.1:44284635-44284654 | None:intergenic | 50.0% | |
CTTCAAACGGCTGTGTTTCG+GGG | - | chr1.1:44284783-44284802 | MS.gene034757:CDS | 50.0% | |
CTTTCGGGCAATCCTCTTTG+AGG | + | chr1.1:44286850-44286869 | None:intergenic | 50.0% | |
GCTTCAAACGGCTGTGTTTC+GGG | - | chr1.1:44284782-44284801 | MS.gene034757:CDS | 50.0% | |
TCAACTGCGGTTAGTGGAGA+AGG | - | chr1.1:44284944-44284963 | MS.gene034757:CDS | 50.0% | |
TCAAGAGCTGAATGGTTCCG+AGG | - | chr1.1:44287435-44287454 | MS.gene034757:CDS | 50.0% | |
TCATGGTTCCTCGTTCGCTT+TGG | + | chr1.1:44287682-44287701 | None:intergenic | 50.0% | |
TCGGGTTCGTCTGCTTCAAA+CGG | - | chr1.1:44284770-44284789 | MS.gene034757:CDS | 50.0% | |
TTACCAATCCTGCAAGGTCC+GGG | - | chr1.1:44285814-44285833 | MS.gene034757:CDS | 50.0% | |
TTACCAATCCTGCAAGGTCC+GGG | + | chr1.1:44285833-44285814 | None:intergenic | 50.0% | |
! | AGTGGAGAAGGTGGTTCTGT+TGG | - | chr1.1:44284956-44284975 | MS.gene034757:CDS | 50.0% |
!! | AGTTCTGGTGTTGTTGGTGG+TGG | + | chr1.1:44284517-44284536 | None:intergenic | 50.0% |
!! | GTTGGTGGTGGTGATGGAAA+TGG | - | chr1.1:44284974-44284993 | MS.gene034757:CDS | 50.0% |
AACTCAGCTGCCAATCACCC+CGG | - | chr1.1:44284479-44284498 | MS.gene034757:CDS | 55.0% | |
ACTGCGGTTAGTGGAGAAGG+TGG | - | chr1.1:44284947-44284966 | MS.gene034757:CDS | 55.0% | |
ATGTTGTACTGCATGCGCGG+TGG | + | chr1.1:44284632-44284651 | None:intergenic | 55.0% | |
CCAACTGAGCTAAGCTCACG+AGG | + | chr1.1:44285614-44285633 | None:intergenic | 55.0% | |
CCTCGTGAGCTTAGCTCAGT+TGG | - | chr1.1:44285611-44285630 | MS.gene034757:CDS | 55.0% | |
CGCGCATGCAGTACAACATG+TGG | - | chr1.1:44284633-44284652 | MS.gene034757:CDS | 55.0% | |
CTCACGAGGACAGTTGGTCA+TGG | + | chr1.1:44285600-44285619 | None:intergenic | 55.0% | |
CTGATTGTTCTGCCGAGAGC+GGG | + | chr1.1:44284571-44284590 | None:intergenic | 55.0% | |
CTTCACGCGCCGCTGAATTA+GGG | + | chr1.1:44284670-44284689 | None:intergenic | 55.0% | |
GCTAAGCTCACGAGGACAGT+TGG | + | chr1.1:44285606-44285625 | None:intergenic | 55.0% | |
GGTTCGAACCCTGACCATCA+CGG | - | chr1.1:44285700-44285719 | MS.gene034757:CDS | 55.0% | |
GTGGCGCGTGAGATAAGTTC+TGG | + | chr1.1:44284532-44284551 | None:intergenic | 55.0% | |
GTTCGAACCCTGACCATCAC+GGG | - | chr1.1:44285701-44285720 | MS.gene034757:CDS | 55.0% | |
TACCAATCCTGCAAGGTCCG+GGG | - | chr1.1:44285815-44285834 | MS.gene034757:CDS | 55.0% | |
TACCAATCCTGCAAGGTCCG+GGG | + | chr1.1:44285834-44285815 | None:intergenic | 55.0% | |
TGTTGTACTGCATGCGCGGT+GGG | + | chr1.1:44284631-44284650 | None:intergenic | 55.0% | |
TTCGAACCCCGTGATGGTCA+GGG | + | chr1.1:44285711-44285730 | None:intergenic | 55.0% | |
TTCGAACCCTGACCATCACG+GGG | - | chr1.1:44285702-44285721 | MS.gene034757:CDS | 55.0% | |
TTGTAGGGCTAGGGCAGTGT+AGG | + | chr1.1:44286635-44286654 | None:intergenic | 55.0% | |
! | GAAGGTGGTTCTGTTGGTGG+TGG | - | chr1.1:44284962-44284981 | MS.gene034757:CDS | 55.0% |
! | GGAGAAGGTGGTTCTGTTGG+TGG | - | chr1.1:44284959-44284978 | MS.gene034757:CDS | 55.0% |
!! | CTGGTGTTGTTGGTGGTGGA+GGG | + | chr1.1:44284513-44284532 | None:intergenic | 55.0% |
!! | GGTTCTGTTGGTGGTGGTGA+TGG | - | chr1.1:44284968-44284987 | MS.gene034757:CDS | 55.0% |
!! | TCTGGTGTTGTTGGTGGTGG+AGG | + | chr1.1:44284514-44284533 | None:intergenic | 55.0% |
AACCCCGGACCTTGCAGGAT+TGG | - | chr1.1:44285883-44285902 | MS.gene034757:CDS | 60.0% | |
AACCCCGGACCTTGCAGGAT+TGG | + | chr1.1:44285902-44285883 | None:intergenic | 60.0% | |
AACCCCGGATTGTGGTGGCA+GGG | + | chr1.1:44285684-44285703 | None:intergenic | 60.0% | |
AACCCCTGCCACCACAATCC+GGG | - | chr1.1:44285678-44285697 | MS.gene034757:CDS | 60.0% | |
AAGCCACACGCGCTACTCAG+GGG | - | chr1.1:44284687-44284706 | MS.gene034757:CDS | 60.0% | |
ACAAGGTTACCGGCGTGTGG+CGG | + | chr1.1:44284452-44284471 | None:intergenic | 60.0% | |
ACATGCTCAAGGGTCAGGCG+AGG | - | chr1.1:44284724-44284743 | MS.gene034757:CDS | 60.0% | |
ACGCGCCACCACAGTTTGTG+GGG | - | chr1.1:44284543-44284562 | MS.gene034757:CDS | 60.0% | |
ACGCGCCGCTGAATTAGGGT+CGG | + | chr1.1:44284666-44284685 | None:intergenic | 60.0% | |
ACGCGCGTGTTCCCATTGGT+GGG | - | chr1.1:44284747-44284766 | MS.gene034757:CDS | 60.0% | |
AGACGAACCCGACCCACCAA+TGG | + | chr1.1:44284762-44284781 | None:intergenic | 60.0% | |
AGGGTTCGAACCCCGGATTG+TGG | + | chr1.1:44285692-44285711 | None:intergenic | 60.0% | |
CACGCGCCACCACAGTTTGT+GGG | - | chr1.1:44284542-44284561 | MS.gene034757:CDS | 60.0% | |
GAACCCCTGCCACCACAATC+CGG | - | chr1.1:44285677-44285696 | MS.gene034757:CDS | 60.0% | |
GAAGCCACACGCGCTACTCA+GGG | - | chr1.1:44284686-44284705 | MS.gene034757:CDS | 60.0% | |
GAAGGCCGTCAGAACCACCT+TGG | + | chr1.1:44284370-44284389 | None:intergenic | 60.0% | |
GACGAACCCGACCCACCAAT+GGG | + | chr1.1:44284761-44284780 | None:intergenic | 60.0% | |
GATGGTCAGGGTTCGAACCC+CGG | + | chr1.1:44285699-44285718 | None:intergenic | 60.0% | |
GCTTCACGCGCCGCTGAATT+AGG | + | chr1.1:44284671-44284690 | None:intergenic | 60.0% | |
GTTCGAACCCCGGATTGTGG+TGG | + | chr1.1:44285689-44285708 | None:intergenic | 60.0% | |
GTTCGAACCCCGTGATGGTC+AGG | + | chr1.1:44285712-44285731 | None:intergenic | 60.0% | |
TCACGCGCCACCACAGTTTG+TGG | - | chr1.1:44284541-44284560 | MS.gene034757:CDS | 60.0% | |
TGAAGCCACACGCGCTACTC+AGG | - | chr1.1:44284685-44284704 | MS.gene034757:CDS | 60.0% | |
! | CGTGTTCCCATTGGTGGGTC+GGG | - | chr1.1:44284752-44284771 | MS.gene034757:CDS | 60.0% |
! | GCGTGTTCCCATTGGTGGGT+CGG | - | chr1.1:44284751-44284770 | MS.gene034757:CDS | 60.0% |
!! | GGAAGTGTTGCCGGGGTGAT+TGG | + | chr1.1:44284492-44284511 | None:intergenic | 60.0% |
!! | GTGGTGGAGGGAAGTGTTGC+CGG | + | chr1.1:44284501-44284520 | None:intergenic | 60.0% |
!! | TGGTGGAGGGAAGTGTTGCC+GGG | + | chr1.1:44284500-44284519 | None:intergenic | 60.0% |
AAGGTCCGGGGTTCGAACCC+CGG | - | chr1.1:44285663-44285682 | MS.gene034757:CDS | 65.0% | |
ACCCCGGATTGTGGTGGCAG+GGG | + | chr1.1:44285683-44285702 | None:intergenic | 65.0% | |
ACCCCTGCCACCACAATCCG+GGG | - | chr1.1:44285679-44285698 | MS.gene034757:CDS | 65.0% | |
AGCGGGACCCCCACAAACTG+TGG | + | chr1.1:44284554-44284573 | None:intergenic | 65.0% | |
CCCCGCCGACCCTAATTCAG+CGG | - | chr1.1:44284658-44284677 | MS.gene034757:CDS | 65.0% | |
CCGCTGAATTAGGGTCGGCG+GGG | + | chr1.1:44284661-44284680 | None:intergenic | 65.0% | |
CGCCGCTGAATTAGGGTCGG+CGG | + | chr1.1:44284663-44284682 | None:intergenic | 65.0% | |
CGCGCCACCACAGTTTGTGG+GGG | - | chr1.1:44284544-44284563 | MS.gene034757:CDS | 65.0% | |
GAACCCCGGATTGTGGTGGC+AGG | + | chr1.1:44285685-44285704 | None:intergenic | 65.0% | |
GACGCGCGTGTTCCCATTGG+TGG | - | chr1.1:44284746-44284765 | MS.gene034757:CDS | 65.0% | |
GAGGACGCGCGTGTTCCCAT+TGG | - | chr1.1:44284743-44284762 | MS.gene034757:CDS | 65.0% | |
GCCGCTGAATTAGGGTCGGC+GGG | + | chr1.1:44284662-44284681 | None:intergenic | 65.0% | |
GGGACCCCCACAAACTGTGG+TGG | + | chr1.1:44284551-44284570 | None:intergenic | 65.0% | |
GGTGGCTGAGGTTCGAACCC+CGG | - | chr1.1:44285868-44285887 | MS.gene034757:CDS | 65.0% | |
GGTGGCTGAGGTTCGAACCC+CGG | + | chr1.1:44285887-44285868 | None:intergenic | 65.0% | |
GTTCGAACCCCGGACCTTGC+AGG | - | chr1.1:44285878-44285897 | MS.gene034757:CDS | 65.0% | |
GTTCGAACCCCGGACCTTGC+AGG | + | chr1.1:44285897-44285878 | None:intergenic | 65.0% | |
GTTTGTGGGGGTCCCGCTCT+CGG | - | chr1.1:44284556-44284575 | MS.gene034757:CDS | 65.0% | |
TCGGGGTTCGAACCCCGTGA+TGG | + | chr1.1:44285717-44285736 | None:intergenic | 65.0% | |
!! | GGTGGAGGGAAGTGTTGCCG+GGG | + | chr1.1:44284499-44284518 | None:intergenic | 65.0% |
AGGTTACCGGCGTGTGGCGG+CGG | + | chr1.1:44284449-44284468 | None:intergenic | 70.0% | |
CAGCCCCTGAGTAGCGCGTG+TGG | + | chr1.1:44284693-44284712 | None:intergenic | 70.0% | |
GGTGGCAGGGGTTCGAACCC+CGG | + | chr1.1:44285671-44285690 | None:intergenic | 70.0% | |
TGTGGCCGGGGTTCGAACCC+CGG | + | chr1.1:44286124-44286143 | None:intergenic | 70.0% | |
! | CCGCAGCCGCCGCCACACGC+CGG | - | chr1.1:44284440-44284459 | MS.gene034757:CDS | 85.0% |
! | CCGGCGTGTGGCGGCGGCTG+CGG | + | chr1.1:44284443-44284462 | None:intergenic | 85.0% |
! | TGGCGGCGGCTGCGGCGCGT+CGG | + | chr1.1:44284435-44284454 | None:intergenic | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 44284335 | 44288128 | 44284335 | ID=MS.gene034757 |
chr1.1 | mRNA | 44284335 | 44288128 | 44284335 | ID=MS.gene034757.t1;Parent=MS.gene034757 |
chr1.1 | exon | 44287385 | 44288128 | 44287385 | ID=MS.gene034757.t1.exon1;Parent=MS.gene034757.t1 |
chr1.1 | CDS | 44287385 | 44288128 | 44287385 | ID=cds.MS.gene034757.t1;Parent=MS.gene034757.t1 |
chr1.1 | exon | 44285546 | 44285919 | 44285546 | ID=MS.gene034757.t1.exon2;Parent=MS.gene034757.t1 |
chr1.1 | CDS | 44285546 | 44285919 | 44285546 | ID=cds.MS.gene034757.t1;Parent=MS.gene034757.t1 |
chr1.1 | exon | 44285227 | 44285287 | 44285227 | ID=MS.gene034757.t1.exon3;Parent=MS.gene034757.t1 |
chr1.1 | CDS | 44285227 | 44285287 | 44285227 | ID=cds.MS.gene034757.t1;Parent=MS.gene034757.t1 |
chr1.1 | exon | 44284335 | 44285108 | 44284335 | ID=MS.gene034757.t1.exon4;Parent=MS.gene034757.t1 |
chr1.1 | CDS | 44284335 | 44285108 | 44284335 | ID=cds.MS.gene034757.t1;Parent=MS.gene034757.t1 |
Gene Sequence |
Protein sequence |