Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene035065.t1 | XP_013448135.1 | 96.5 | 172 | 6 | 0 | 1 | 172 | 1 | 172 | 8.60E-81 | 309.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene035065.t1 | Q8L8Q3 | 84.1 | 113 | 18 | 0 | 5 | 117 | 33 | 145 | 3.6e-51 | 202.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene035065.t1 | A0A072TXJ1 | 96.5 | 172 | 6 | 0 | 1 | 172 | 1 | 172 | 6.2e-81 | 309.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene035065.t1 | TF | LOB |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene035065.t1 | MTR_7g033800 | 97.093 | 172 | 5 | 0 | 1 | 172 | 1 | 172 | 2.20e-126 | 352 |
MS.gene035065.t1 | MTR_6g005070 | 89.091 | 110 | 12 | 0 | 4 | 113 | 2 | 111 | 3.02e-69 | 207 |
MS.gene035065.t1 | MTR_3g077240 | 86.087 | 115 | 15 | 1 | 1 | 115 | 1 | 114 | 5.29e-69 | 207 |
MS.gene035065.t1 | MTR_6g005080 | 85.714 | 112 | 16 | 0 | 4 | 115 | 3 | 114 | 6.41e-68 | 203 |
MS.gene035065.t1 | MTR_4g105170 | 63.953 | 172 | 47 | 3 | 1 | 157 | 1 | 172 | 1.77e-67 | 204 |
MS.gene035065.t1 | MTR_8g040900 | 71.560 | 109 | 31 | 0 | 6 | 114 | 2 | 110 | 4.69e-50 | 160 |
MS.gene035065.t1 | MTR_5g017950 | 66.364 | 110 | 37 | 0 | 5 | 114 | 2 | 111 | 1.79e-49 | 162 |
MS.gene035065.t1 | MTR_5g083230 | 62.393 | 117 | 40 | 1 | 9 | 125 | 4 | 116 | 2.39e-49 | 157 |
MS.gene035065.t1 | MTR_3g073690 | 66.667 | 111 | 37 | 0 | 5 | 115 | 3 | 113 | 1.87e-48 | 156 |
MS.gene035065.t1 | MTR_5g083010 | 50.000 | 150 | 69 | 1 | 8 | 157 | 8 | 151 | 1.52e-47 | 153 |
MS.gene035065.t1 | MTR_4g083680 | 64.078 | 103 | 37 | 0 | 10 | 112 | 14 | 116 | 5.59e-47 | 151 |
MS.gene035065.t1 | MTR_2g068760 | 63.107 | 103 | 38 | 0 | 10 | 112 | 12 | 114 | 1.10e-46 | 150 |
MS.gene035065.t1 | MTR_3g452660 | 67.290 | 107 | 35 | 0 | 8 | 114 | 4 | 110 | 1.63e-46 | 154 |
MS.gene035065.t1 | MTR_3g071590 | 59.829 | 117 | 43 | 1 | 8 | 124 | 5 | 117 | 9.63e-46 | 147 |
MS.gene035065.t1 | MTR_3g071420 | 67.010 | 97 | 32 | 0 | 8 | 104 | 11 | 107 | 4.65e-45 | 147 |
MS.gene035065.t1 | MTR_3g031660 | 60.577 | 104 | 41 | 0 | 9 | 112 | 5 | 108 | 1.49e-44 | 145 |
MS.gene035065.t1 | MTR_5g083960 | 59.821 | 112 | 45 | 0 | 3 | 114 | 31 | 142 | 2.08e-44 | 145 |
MS.gene035065.t1 | MTR_3g094690 | 61.905 | 105 | 40 | 0 | 10 | 114 | 46 | 150 | 3.65e-44 | 146 |
MS.gene035065.t1 | MTR_2g093310 | 59.223 | 103 | 42 | 0 | 10 | 112 | 32 | 134 | 1.05e-41 | 139 |
MS.gene035065.t1 | MTR_3g094690 | 60.952 | 105 | 40 | 1 | 10 | 114 | 46 | 149 | 1.32e-41 | 139 |
MS.gene035065.t1 | MTR_7g096530 | 60.000 | 115 | 42 | 2 | 1 | 111 | 1 | 115 | 1.44e-40 | 136 |
MS.gene035065.t1 | MTR_4g060950 | 54.464 | 112 | 50 | 1 | 2 | 112 | 15 | 126 | 1.84e-40 | 135 |
MS.gene035065.t1 | MTR_5g075020 | 63.810 | 105 | 38 | 0 | 10 | 114 | 42 | 146 | 1.69e-39 | 134 |
MS.gene035065.t1 | MTR_5g075020 | 63.810 | 105 | 38 | 0 | 10 | 114 | 46 | 150 | 2.26e-39 | 134 |
MS.gene035065.t1 | MTR_8g036085 | 59.048 | 105 | 42 | 1 | 11 | 114 | 23 | 127 | 7.11e-39 | 132 |
MS.gene035065.t1 | MTR_1g095850 | 57.426 | 101 | 43 | 0 | 12 | 112 | 73 | 173 | 1.68e-38 | 131 |
MS.gene035065.t1 | MTR_1g070220 | 57.265 | 117 | 45 | 2 | 1 | 112 | 1 | 117 | 3.72e-38 | 130 |
MS.gene035065.t1 | MTR_8g036105 | 59.804 | 102 | 40 | 1 | 11 | 111 | 18 | 119 | 9.24e-36 | 124 |
MS.gene035065.t1 | MTR_7g074990 | 60.417 | 96 | 37 | 1 | 11 | 105 | 20 | 115 | 2.21e-35 | 124 |
MS.gene035065.t1 | MTR_7g028905 | 50.980 | 102 | 50 | 0 | 10 | 111 | 4 | 105 | 1.02e-34 | 118 |
MS.gene035065.t1 | MTR_5g080470 | 55.670 | 97 | 42 | 1 | 10 | 105 | 6 | 102 | 9.51e-34 | 118 |
MS.gene035065.t1 | MTR_8g079660 | 50.000 | 104 | 52 | 0 | 11 | 114 | 8 | 111 | 3.56e-33 | 119 |
MS.gene035065.t1 | MTR_6g027710 | 51.923 | 104 | 49 | 1 | 10 | 112 | 39 | 142 | 5.55e-33 | 117 |
MS.gene035065.t1 | MTR_7g096610 | 57.143 | 98 | 41 | 1 | 8 | 104 | 5 | 102 | 9.61e-33 | 116 |
MS.gene035065.t1 | MTR_5g093010 | 46.552 | 116 | 58 | 1 | 12 | 127 | 6 | 117 | 2.58e-32 | 113 |
MS.gene035065.t1 | MTR_7g075230 | 53.043 | 115 | 51 | 2 | 11 | 122 | 12 | 126 | 2.62e-32 | 114 |
MS.gene035065.t1 | MTR_1g070205 | 54.737 | 95 | 42 | 1 | 11 | 104 | 12 | 106 | 5.57e-32 | 115 |
MS.gene035065.t1 | MTR_8g079620 | 46.154 | 104 | 56 | 0 | 11 | 114 | 8 | 111 | 2.23e-29 | 108 |
MS.gene035065.t1 | MTR_4g107450 | 36.306 | 157 | 88 | 4 | 12 | 161 | 11 | 162 | 1.85e-28 | 107 |
MS.gene035065.t1 | MTR_6g011200 | 44.898 | 98 | 53 | 1 | 9 | 105 | 7 | 104 | 3.56e-28 | 105 |
MS.gene035065.t1 | MTR_6g027700 | 48.515 | 101 | 51 | 1 | 11 | 110 | 7 | 107 | 4.61e-28 | 104 |
MS.gene035065.t1 | MTR_6g011230 | 43.000 | 100 | 57 | 0 | 8 | 107 | 8 | 107 | 6.59e-27 | 100 |
MS.gene035065.t1 | MTR_8g079580 | 46.667 | 105 | 55 | 1 | 11 | 114 | 8 | 112 | 1.15e-26 | 100 |
MS.gene035065.t1 | MTR_6g011250 | 44.762 | 105 | 57 | 1 | 8 | 111 | 6 | 110 | 3.06e-26 | 99.0 |
MS.gene035065.t1 | MTR_8g017090 | 40.385 | 104 | 62 | 0 | 8 | 111 | 9 | 112 | 2.24e-24 | 96.7 |
MS.gene035065.t1 | MTR_4g099230 | 38.462 | 104 | 62 | 2 | 12 | 114 | 3 | 105 | 5.10e-23 | 89.7 |
MS.gene035065.t1 | MTR_2g100020 | 41.667 | 96 | 56 | 0 | 12 | 107 | 20 | 115 | 1.23e-21 | 89.0 |
MS.gene035065.t1 | MTR_5g085390 | 39.423 | 104 | 62 | 1 | 9 | 111 | 7 | 110 | 3.64e-20 | 84.3 |
MS.gene035065.t1 | MTR_4g088035 | 35.556 | 90 | 58 | 0 | 10 | 99 | 5 | 94 | 1.86e-18 | 80.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene035065.t1 | AT3G27650 | 84.071 | 113 | 18 | 0 | 5 | 117 | 33 | 145 | 9.44e-69 | 206 |
MS.gene035065.t1 | AT5G63090 | 83.051 | 118 | 20 | 0 | 1 | 118 | 1 | 118 | 2.19e-67 | 203 |
MS.gene035065.t1 | AT5G63090 | 83.051 | 118 | 20 | 0 | 1 | 118 | 1 | 118 | 2.19e-67 | 203 |
MS.gene035065.t1 | AT5G63090 | 83.051 | 118 | 20 | 0 | 1 | 118 | 1 | 118 | 2.19e-67 | 203 |
MS.gene035065.t1 | AT5G63090 | 83.051 | 118 | 20 | 0 | 1 | 118 | 1 | 118 | 2.19e-67 | 203 |
MS.gene035065.t1 | AT1G65620 | 68.966 | 116 | 34 | 1 | 1 | 116 | 1 | 114 | 7.30e-50 | 159 |
MS.gene035065.t1 | AT1G65620 | 68.966 | 116 | 34 | 1 | 1 | 116 | 1 | 114 | 7.30e-50 | 159 |
MS.gene035065.t1 | AT1G65620 | 68.966 | 116 | 34 | 1 | 1 | 116 | 1 | 114 | 7.30e-50 | 159 |
MS.gene035065.t1 | AT1G65620 | 68.966 | 116 | 34 | 1 | 1 | 116 | 1 | 114 | 7.30e-50 | 159 |
MS.gene035065.t1 | AT1G65620 | 68.966 | 116 | 34 | 1 | 1 | 116 | 1 | 114 | 7.30e-50 | 159 |
MS.gene035065.t1 | AT5G66870 | 65.455 | 110 | 38 | 0 | 6 | 115 | 2 | 111 | 1.46e-49 | 162 |
MS.gene035065.t1 | AT2G30130 | 62.281 | 114 | 39 | 1 | 9 | 122 | 6 | 115 | 7.26e-48 | 154 |
MS.gene035065.t1 | AT2G23660 | 59.813 | 107 | 43 | 0 | 8 | 114 | 2 | 108 | 2.75e-44 | 149 |
MS.gene035065.t1 | AT2G23660 | 59.813 | 107 | 43 | 0 | 8 | 114 | 2 | 108 | 2.75e-44 | 149 |
MS.gene035065.t1 | AT2G23660 | 59.813 | 107 | 43 | 0 | 8 | 114 | 2 | 108 | 2.75e-44 | 149 |
MS.gene035065.t1 | AT1G16530 | 61.607 | 112 | 42 | 1 | 10 | 120 | 13 | 124 | 3.11e-44 | 144 |
MS.gene035065.t1 | AT1G31320 | 59.322 | 118 | 46 | 1 | 10 | 125 | 12 | 129 | 3.87e-44 | 144 |
MS.gene035065.t1 | AT2G30340 | 55.932 | 118 | 47 | 1 | 10 | 122 | 52 | 169 | 2.84e-43 | 145 |
MS.gene035065.t1 | AT2G30340 | 55.932 | 118 | 47 | 1 | 10 | 122 | 51 | 168 | 3.15e-43 | 144 |
MS.gene035065.t1 | AT3G11090 | 59.259 | 108 | 44 | 0 | 8 | 115 | 8 | 115 | 7.07e-43 | 140 |
MS.gene035065.t1 | AT1G07900 | 59.223 | 103 | 42 | 0 | 10 | 112 | 32 | 134 | 9.65e-42 | 138 |
MS.gene035065.t1 | AT2G28500 | 59.223 | 103 | 42 | 0 | 10 | 112 | 54 | 156 | 3.05e-41 | 138 |
MS.gene035065.t1 | AT2G40470 | 61.905 | 105 | 40 | 0 | 10 | 114 | 19 | 123 | 5.38e-40 | 134 |
MS.gene035065.t1 | AT2G40470 | 61.905 | 105 | 40 | 0 | 10 | 114 | 44 | 148 | 1.65e-39 | 134 |
MS.gene035065.t1 | AT3G26660 | 51.304 | 115 | 55 | 1 | 12 | 125 | 6 | 120 | 1.94e-39 | 130 |
MS.gene035065.t1 | AT3G26620 | 56.000 | 100 | 44 | 0 | 12 | 111 | 6 | 105 | 3.93e-39 | 129 |
MS.gene035065.t1 | AT2G42430 | 55.372 | 121 | 49 | 2 | 1 | 116 | 1 | 121 | 9.01e-38 | 130 |
MS.gene035065.t1 | AT3G03760 | 57.692 | 104 | 43 | 1 | 10 | 112 | 50 | 153 | 2.27e-37 | 130 |
MS.gene035065.t1 | AT4G00210 | 55.357 | 112 | 49 | 1 | 1 | 111 | 1 | 112 | 2.08e-36 | 125 |
MS.gene035065.t1 | AT4G00220 | 60.606 | 99 | 38 | 1 | 14 | 111 | 20 | 118 | 2.43e-36 | 125 |
MS.gene035065.t1 | AT2G45420 | 60.606 | 99 | 38 | 1 | 14 | 111 | 40 | 138 | 4.31e-36 | 126 |
MS.gene035065.t1 | AT5G06080 | 51.402 | 107 | 51 | 1 | 10 | 115 | 6 | 112 | 4.16e-34 | 119 |
MS.gene035065.t1 | AT2G45410 | 44.937 | 158 | 79 | 4 | 14 | 170 | 19 | 169 | 1.49e-33 | 117 |
MS.gene035065.t1 | AT2G31310 | 55.208 | 96 | 42 | 1 | 10 | 104 | 6 | 101 | 5.74e-33 | 116 |
MS.gene035065.t1 | AT3G58190 | 55.660 | 106 | 46 | 1 | 1 | 105 | 1 | 106 | 8.57e-33 | 116 |
MS.gene035065.t1 | AT2G42440 | 52.525 | 99 | 46 | 1 | 8 | 105 | 4 | 102 | 1.36e-32 | 117 |
MS.gene035065.t1 | AT3G50510 | 47.170 | 106 | 56 | 0 | 9 | 114 | 10 | 115 | 7.63e-30 | 108 |
MS.gene035065.t1 | AT3G50510 | 47.170 | 106 | 56 | 0 | 9 | 114 | 10 | 115 | 7.63e-30 | 108 |
MS.gene035065.t1 | AT5G35900 | 41.071 | 112 | 66 | 0 | 12 | 123 | 6 | 117 | 9.01e-27 | 100 |
MS.gene035065.t1 | AT3G13850 | 35.433 | 127 | 82 | 0 | 12 | 138 | 37 | 163 | 4.95e-26 | 100 |
MS.gene035065.t1 | AT3G47870 | 37.615 | 109 | 68 | 0 | 8 | 116 | 33 | 141 | 1.08e-25 | 100 |
MS.gene035065.t1 | AT1G72980 | 40.541 | 111 | 66 | 0 | 1 | 111 | 3 | 113 | 4.31e-24 | 94.0 |
MS.gene035065.t1 | AT1G06280 | 43.011 | 93 | 52 | 1 | 12 | 104 | 25 | 116 | 3.59e-20 | 83.6 |
MS.gene035065.t1 | AT4G22700 | 36.937 | 111 | 68 | 2 | 12 | 121 | 6 | 115 | 8.02e-18 | 77.0 |
MS.gene035065.t1 | AT2G19820 | 37.363 | 91 | 56 | 1 | 8 | 97 | 9 | 99 | 6.84e-16 | 70.5 |
MS.gene035065.t1 | AT5G15060 | 43.243 | 74 | 38 | 2 | 12 | 82 | 18 | 90 | 1.70e-14 | 67.0 |
Find 43 sgRNAs with CRISPR-Local
Find 49 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCAAATGTTCACAAAATATT+TGG | 0.149406 | 7.4:-67884643 | MS.gene035065:CDS |
GCAAATTTCTGTGGCTCTTC+TGG | 0.194109 | 7.4:+67884664 | None:intergenic |
AGGATTAAAGATCCAGTTTA+TGG | 0.225345 | 7.4:-67884532 | MS.gene035065:CDS |
GGCTCTTCTGGTGGGAAATA+TGG | 0.297872 | 7.4:+67884676 | None:intergenic |
AATCCTTGCCTCGGCTTCAT+AGG | 0.305194 | 7.4:+67884549 | None:intergenic |
TAGTAGAATCAAGTTCCTTT+TGG | 0.319682 | 7.4:+67884464 | None:intergenic |
GGAGCCTAAGAACTTGTCTT+TGG | 0.328487 | 7.4:+67884485 | None:intergenic |
ATCATGATATCGCAGCTATA+AGG | 0.383935 | 7.4:-67884399 | MS.gene035065:CDS |
GCACCAACACAACCATAAAC+TGG | 0.396732 | 7.4:+67884520 | None:intergenic |
TCCTCCAAAGACAAGTTCTT+AGG | 0.431787 | 7.4:-67884489 | MS.gene035065:CDS |
ATAAGGATCGGTGGGGAAGA+TGG | 0.446744 | 7.4:-67884382 | MS.gene035065:CDS |
TTGTCTTTGGAGGACTGAAA+TGG | 0.450349 | 7.4:+67884498 | None:intergenic |
TATGGAGCAAATATGCAATC+TGG | 0.454516 | 7.4:+67884694 | None:intergenic |
AATTTCTGTGGCTCTTCTGG+TGG | 0.462397 | 7.4:+67884667 | None:intergenic |
GCCTAAGAACTTGTCTTTGG+AGG | 0.492984 | 7.4:+67884488 | None:intergenic |
TCTCGGTCAATCTCCTCCTC+CGG | 0.512178 | 7.4:-67884347 | MS.gene035065:CDS |
TGGATCTTTAATCCTTGCCT+CGG | 0.516855 | 7.4:+67884540 | None:intergenic |
ACAAGTTCTTAGGCTCCAAA+AGG | 0.517159 | 7.4:-67884479 | MS.gene035065:CDS |
GATGGAGGTGGTTCTTCTCT+CGG | 0.519166 | 7.4:-67884364 | MS.gene035065:CDS |
TCATTATTGTTCCAAGGAGA+AGG | 0.524865 | 7.4:+67884313 | None:intergenic |
ATAGCTGCGATATCATGATT+CGG | 0.525283 | 7.4:+67884403 | None:intergenic |
TGAAGTGCAACAACATCAAA+GGG | 0.528377 | 7.4:-67884593 | MS.gene035065:CDS |
GATGGTTATCACACGGGAGG+AGG | 0.542341 | 7.4:-67884280 | MS.gene035065:CDS |
GATCCAGTTTATGGTTGTGT+TGG | 0.554848 | 7.4:-67884523 | MS.gene035065:CDS |
TCGCAGCTATAAGGATCGGT+GGG | 0.558420 | 7.4:-67884390 | MS.gene035065:CDS |
ATGAAGTGCAACAACATCAA+AGG | 0.561125 | 7.4:-67884594 | MS.gene035065:CDS |
ATTTCTGTGGCTCTTCTGGT+GGG | 0.562695 | 7.4:+67884668 | None:intergenic |
CTCTCTTGCCTATGAAGCCG+AGG | 0.568060 | 7.4:-67884557 | MS.gene035065:CDS |
AGGATCGGTGGGGAAGATGG+AGG | 0.572677 | 7.4:-67884379 | MS.gene035065:CDS |
AGTGGATCATTATTGTTCCA+AGG | 0.579950 | 7.4:+67884307 | None:intergenic |
TGAACATTTGCAAATTTCTG+TGG | 0.582165 | 7.4:+67884655 | None:intergenic |
ATCGGTGGGGAAGATGGAGG+TGG | 0.584704 | 7.4:-67884376 | MS.gene035065:CDS |
ATCGCAGCTATAAGGATCGG+TGG | 0.589681 | 7.4:-67884391 | MS.gene035065:CDS |
TTGCCTATGAAGCCGAGGCA+AGG | 0.591021 | 7.4:-67884552 | MS.gene035065:CDS |
AATAATGATCCACTTGGCGA+TGG | 0.592711 | 7.4:-67884298 | MS.gene035065:CDS |
TGGAACAATAATGATCCACT+TGG | 0.604864 | 7.4:-67884304 | MS.gene035065:CDS |
AGCACATGGTGAATTTGAGT+AGG | 0.632061 | 7.4:+67884747 | None:intergenic |
GATATCGCAGCTATAAGGAT+CGG | 0.642191 | 7.4:-67884394 | MS.gene035065:CDS |
CTTGGCGATGGTTATCACAC+GGG | 0.658586 | 7.4:-67884286 | MS.gene035065:CDS |
ACTTGGCGATGGTTATCACA+CGG | 0.661040 | 7.4:-67884287 | MS.gene035065:CDS |
GGCGATGGTTATCACACGGG+AGG | 0.663949 | 7.4:-67884283 | MS.gene035065:CDS |
GTGTGATAACCATCGCCAAG+TGG | 0.665247 | 7.4:+67884289 | None:intergenic |
CGCAGCTATAAGGATCGGTG+GGG | 0.674584 | 7.4:-67884389 | MS.gene035065:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | GCAAATGTTCACAAAATATT+TGG | - | chr7.4:67884387-67884406 | MS.gene035065:CDS | 25.0% |
AGGATTAAAGATCCAGTTTA+TGG | - | chr7.4:67884498-67884517 | MS.gene035065:CDS | 30.0% | |
TGAACATTTGCAAATTTCTG+TGG | + | chr7.4:67884378-67884397 | None:intergenic | 30.0% | |
! | TAGTAGAATCAAGTTCCTTT+TGG | + | chr7.4:67884569-67884588 | None:intergenic | 30.0% |
AGTGGATCATTATTGTTCCA+AGG | + | chr7.4:67884726-67884745 | None:intergenic | 35.0% | |
ATAGCTGCGATATCATGATT+CGG | + | chr7.4:67884630-67884649 | None:intergenic | 35.0% | |
ATCATGATATCGCAGCTATA+AGG | - | chr7.4:67884631-67884650 | MS.gene035065:CDS | 35.0% | |
ATGAAGTGCAACAACATCAA+AGG | - | chr7.4:67884436-67884455 | MS.gene035065:CDS | 35.0% | |
TATGGAGCAAATATGCAATC+TGG | + | chr7.4:67884339-67884358 | None:intergenic | 35.0% | |
TCATTATTGTTCCAAGGAGA+AGG | + | chr7.4:67884720-67884739 | None:intergenic | 35.0% | |
TGAAGTGCAACAACATCAAA+GGG | - | chr7.4:67884437-67884456 | MS.gene035065:CDS | 35.0% | |
TGGAACAATAATGATCCACT+TGG | - | chr7.4:67884726-67884745 | MS.gene035065:CDS | 35.0% | |
! | CTTTTTACTATCCTTCTCCT+TGG | - | chr7.4:67884706-67884725 | MS.gene035065:CDS | 35.0% |
AATAATGATCCACTTGGCGA+TGG | - | chr7.4:67884732-67884751 | MS.gene035065:CDS | 40.0% | |
ACAAGTTCTTAGGCTCCAAA+AGG | - | chr7.4:67884551-67884570 | MS.gene035065:CDS | 40.0% | |
AGCACATGGTGAATTTGAGT+AGG | + | chr7.4:67884286-67884305 | None:intergenic | 40.0% | |
GATATCGCAGCTATAAGGAT+CGG | - | chr7.4:67884636-67884655 | MS.gene035065:CDS | 40.0% | |
GATCCAGTTTATGGTTGTGT+TGG | - | chr7.4:67884507-67884526 | MS.gene035065:CDS | 40.0% | |
GGAGAAGGATAGTAAAAAGC+CGG | + | chr7.4:67884705-67884724 | None:intergenic | 40.0% | |
TCCTCCAAAGACAAGTTCTT+AGG | - | chr7.4:67884541-67884560 | MS.gene035065:CDS | 40.0% | |
TGGATCTTTAATCCTTGCCT+CGG | + | chr7.4:67884493-67884512 | None:intergenic | 40.0% | |
! | TTGTCTTTGGAGGACTGAAA+TGG | + | chr7.4:67884535-67884554 | None:intergenic | 40.0% |
AAAAACTTGCACGCAGCACA+TGG | + | chr7.4:67884300-67884319 | None:intergenic | 45.0% | |
AATTTCTGTGGCTCTTCTGG+TGG | + | chr7.4:67884366-67884385 | None:intergenic | 45.0% | |
ACTTGGCGATGGTTATCACA+CGG | - | chr7.4:67884743-67884762 | MS.gene035065:CDS | 45.0% | |
ATTTCTGTGGCTCTTCTGGT+GGG | + | chr7.4:67884365-67884384 | None:intergenic | 45.0% | |
GAAGGATAGTAAAAAGCCGG+AGG | + | chr7.4:67884702-67884721 | None:intergenic | 45.0% | |
GCAAATTTCTGTGGCTCTTC+TGG | + | chr7.4:67884369-67884388 | None:intergenic | 45.0% | |
GCACCAACACAACCATAAAC+TGG | + | chr7.4:67884513-67884532 | None:intergenic | 45.0% | |
GCCTAAGAACTTGTCTTTGG+AGG | + | chr7.4:67884545-67884564 | None:intergenic | 45.0% | |
GGAGCCTAAGAACTTGTCTT+TGG | + | chr7.4:67884548-67884567 | None:intergenic | 45.0% | |
!! | CTGCGTGCAAGTTTTTGAGA+AGG | - | chr7.4:67884304-67884323 | MS.gene035065:CDS | 45.0% |
AATCCTTGCCTCGGCTTCAT+AGG | + | chr7.4:67884484-67884503 | None:intergenic | 50.0% | |
ATAAGGATCGGTGGGGAAGA+TGG | - | chr7.4:67884648-67884667 | MS.gene035065:CDS | 50.0% | |
ATCGCAGCTATAAGGATCGG+TGG | - | chr7.4:67884639-67884658 | MS.gene035065:CDS | 50.0% | |
CTTGGCGATGGTTATCACAC+GGG | - | chr7.4:67884744-67884763 | MS.gene035065:CDS | 50.0% | |
GATGGAGGTGGTTCTTCTCT+CGG | - | chr7.4:67884666-67884685 | MS.gene035065:CDS | 50.0% | |
GGATAGTAAAAAGCCGGAGG+AGG | + | chr7.4:67884699-67884718 | None:intergenic | 50.0% | |
GGCTCTTCTGGTGGGAAATA+TGG | + | chr7.4:67884357-67884376 | None:intergenic | 50.0% | |
GTGTGATAACCATCGCCAAG+TGG | + | chr7.4:67884744-67884763 | None:intergenic | 50.0% | |
TCGCAGCTATAAGGATCGGT+GGG | - | chr7.4:67884640-67884659 | MS.gene035065:CDS | 50.0% | |
CGCAGCTATAAGGATCGGTG+GGG | - | chr7.4:67884641-67884660 | MS.gene035065:CDS | 55.0% | |
CTCTCTTGCCTATGAAGCCG+AGG | - | chr7.4:67884473-67884492 | MS.gene035065:CDS | 55.0% | |
GATGGTTATCACACGGGAGG+AGG | - | chr7.4:67884750-67884769 | MS.gene035065:CDS | 55.0% | |
TCTCGGTCAATCTCCTCCTC+CGG | - | chr7.4:67884683-67884702 | MS.gene035065:CDS | 55.0% | |
TTGCCTATGAAGCCGAGGCA+AGG | - | chr7.4:67884478-67884497 | MS.gene035065:CDS | 55.0% | |
AGGATCGGTGGGGAAGATGG+AGG | - | chr7.4:67884651-67884670 | MS.gene035065:CDS | 60.0% | |
ATCGGTGGGGAAGATGGAGG+TGG | - | chr7.4:67884654-67884673 | MS.gene035065:CDS | 60.0% | |
GGCGATGGTTATCACACGGG+AGG | - | chr7.4:67884747-67884766 | MS.gene035065:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 67884267 | 67884785 | 67884267 | ID=MS.gene035065 |
chr7.4 | mRNA | 67884267 | 67884785 | 67884267 | ID=MS.gene035065.t1;Parent=MS.gene035065 |
chr7.4 | exon | 67884267 | 67884785 | 67884267 | ID=MS.gene035065.t1.exon1;Parent=MS.gene035065.t1 |
chr7.4 | CDS | 67884267 | 67884785 | 67884267 | ID=cds.MS.gene035065.t1;Parent=MS.gene035065.t1 |
Gene Sequence |
Protein sequence |