AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene03509

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene03509.t1 MTR_6g043060 71.037 328 66 3 1 299 1 328 3.06e-166 464
MS.gene03509.t1 MTR_8g083100 75.540 278 25 2 23 257 23 300 4.80e-145 417
MS.gene03509.t1 MTR_8g083100 88.636 44 5 0 257 300 414 457 1.39e-18 85.9
MS.gene03509.t1 MTR_2g100680 58.472 301 79 4 1 257 12 310 1.17e-111 331
MS.gene03509.t1 MTR_6g044340 63.672 256 70 2 68 300 8 263 2.26e-109 318
MS.gene03509.t1 MTR_2g100670 50.307 326 99 7 1 298 14 304 2.22e-95 284
MS.gene03509.t1 MTR_2g100670 50.307 326 99 7 1 298 122 412 1.98e-93 283
MS.gene03509.t1 MTR_5g029680 49.763 211 92 4 22 218 32 242 8.86e-63 206
MS.gene03509.t1 MTR_8g087540 49.038 208 94 4 15 216 5 206 3.75e-60 197
MS.gene03509.t1 MTR_6g044430 48.016 252 44 6 100 300 14 229 9.63e-57 182
MS.gene03509.t1 MTR_6g044440 56.425 179 26 3 174 300 1 179 4.84e-55 177
MS.gene03509.t1 MTR_4g077970 43.541 209 106 3 20 216 10 218 3.43e-53 181
MS.gene03509.t1 MTR_7g095680 45.673 208 101 5 19 215 46 252 3.98e-50 170
MS.gene03509.t1 MTR_1g102860 42.601 223 111 6 7 215 20 239 4.49e-50 169
MS.gene03509.t1 MTR_3g104550 43.204 206 107 5 19 217 43 245 3.81e-49 167
MS.gene03509.t1 MTR_1g061170 37.607 234 131 4 20 243 47 275 3.97e-46 161
MS.gene03509.t1 MTR_1g071360 41.262 206 101 4 22 218 32 226 7.12e-46 158
MS.gene03509.t1 MTR_1g071360 39.367 221 114 4 22 233 29 238 1.10e-45 158
MS.gene03509.t1 MTR_3g101870 65.686 102 35 0 12 113 14 115 4.81e-45 157
MS.gene03509.t1 MTR_8g105780 47.179 195 90 6 20 201 20 214 3.28e-44 154
MS.gene03509.t1 MTR_5g017470 62.264 106 40 0 17 122 4 109 7.97e-43 149
MS.gene03509.t1 MTR_5g089170 67.742 93 30 0 21 113 24 116 4.69e-42 145
MS.gene03509.t1 MTR_5g010680 58.333 108 45 0 6 113 8 115 1.82e-41 147
MS.gene03509.t1 MTR_6g086805 40.196 204 115 2 20 219 9 209 4.32e-41 145
MS.gene03509.t1 MTR_2g017890 57.407 108 46 0 12 119 5 112 1.79e-40 145
MS.gene03509.t1 MTR_6g044350 54.795 146 33 3 174 286 1 146 3.60e-39 135
MS.gene03509.t1 MTR_0020s0020 63.441 93 34 0 21 113 32 124 1.26e-38 139
MS.gene03509.t1 MTR_7g091370 60.215 93 37 0 21 113 21 113 1.67e-38 135
MS.gene03509.t1 MTR_1g100777 61.053 95 37 0 21 115 17 111 7.76e-38 136
MS.gene03509.t1 MTR_4g088900 56.701 97 38 1 21 113 32 128 3.37e-34 124
MS.gene03509.t1 MTR_6g044510 64.789 71 17 1 238 300 18 88 1.46e-23 92.4
MS.gene03509.t1 MTR_5g047190 46.392 97 45 2 30 119 1 97 2.29e-22 89.7
MS.gene03509.t1 MTR_4g045757 59.420 69 27 1 12 79 3 71 1.14e-20 84.3
MS.gene03509.t1 MTR_1g061170 27.979 193 116 6 61 243 1 180 1.82e-12 67.4
MS.gene03509.t1 MTR_6g044500 46.341 82 19 3 205 262 1 81 3.33e-12 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene03509.t1 AT4G13980 53.360 253 108 3 1 243 1 253 8.53e-86 265
MS.gene03509.t1 AT4G17750 47.685 216 92 4 22 216 52 267 3.68e-58 194
MS.gene03509.t1 AT5G16820 48.341 211 94 5 20 216 25 234 6.53e-58 193
MS.gene03509.t1 AT5G16820 48.341 211 94 5 20 216 25 234 6.53e-58 193
MS.gene03509.t1 AT1G32330 45.532 235 109 5 1 216 16 250 9.35e-58 193
MS.gene03509.t1 AT1G32330 45.532 235 109 5 1 216 16 250 9.96e-58 192
MS.gene03509.t1 AT3G02990 42.918 233 120 4 8 228 9 240 1.12e-57 192
MS.gene03509.t1 AT5G45710 37.778 315 158 8 14 299 5 310 7.53e-55 181
MS.gene03509.t1 AT5G45710 37.778 315 158 8 14 299 5 310 7.53e-55 181
MS.gene03509.t1 AT4G18880 48.131 214 95 4 16 220 9 215 1.40e-52 177
MS.gene03509.t1 AT2G26150 42.342 222 120 4 19 232 41 262 3.93e-50 169
MS.gene03509.t1 AT2G26150 42.342 222 120 4 19 232 41 262 3.93e-50 169
MS.gene03509.t1 AT3G22830 40.278 216 116 3 19 221 58 273 1.73e-47 164
MS.gene03509.t1 AT3G51910 41.706 211 106 5 22 226 29 228 6.26e-47 159
MS.gene03509.t1 AT5G03720 41.346 208 118 3 20 223 53 260 5.47e-46 160
MS.gene03509.t1 AT5G03720 41.346 208 118 3 20 223 53 260 5.47e-46 160
MS.gene03509.t1 AT3G24520 42.079 202 94 4 20 217 15 197 3.82e-45 156
MS.gene03509.t1 AT1G46264 61.607 112 33 1 21 122 33 144 1.85e-44 154
MS.gene03509.t1 AT1G67970 45.128 195 94 5 20 204 17 208 6.08e-44 154
MS.gene03509.t1 AT5G43840 42.690 171 87 2 21 190 18 178 8.68e-41 143
MS.gene03509.t1 AT5G54070 42.703 185 100 2 20 203 69 248 2.15e-40 144
MS.gene03509.t1 AT3G63350 31.449 283 160 8 19 297 25 277 2.35e-39 139
MS.gene03509.t1 AT4G11660 62.000 100 38 0 14 113 51 150 4.45e-39 141
MS.gene03509.t1 AT5G62020 51.261 119 57 1 1 118 1 119 2.50e-38 137
MS.gene03509.t1 AT4G36990 45.455 176 61 4 8 151 2 174 3.63e-38 136
MS.gene03509.t1 AT2G41690 53.043 115 54 0 22 136 40 154 5.72e-38 135
MS.gene03509.t1 AT4G18870 47.727 88 46 0 22 109 146 233 4.77e-23 96.7
MS.gene03509.t1 AT4G18870 46.875 96 50 1 14 109 5 99 8.50e-23 95.9
MS.gene03509.t1 AT1G77570 43.478 92 48 3 19 106 22 113 3.78e-17 77.0
MS.gene03509.t1 AT2G26150 32.020 203 123 6 40 232 10 207 1.65e-15 75.5
MS.gene03509.t1 AT2G26150 32.020 203 123 6 40 232 10 207 1.65e-15 75.5
MS.gene03509.t1 AT4G19630 35.052 97 60 1 19 112 8 104 1.94e-13 66.6
MS.gene03509.t1 AT5G45710 29.148 223 120 9 106 299 1 214 7.55e-13 67.4
MS.gene03509.t1 AT5G45710 29.148 223 120 9 106 299 1 214 7.55e-13 67.4

Find 71 sgRNAs with CRISPR-Local

Find 336 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTCCAATGCTGCCCTTTC+TGG -0.010683 6.2:+37892391 None:intergenic
ATAATTATAGCTTAGGAGTT+TGG 0.257010 6.2:+37892327 None:intergenic
CAAAATCAAATCCATGGATT+TGG 0.313501 6.2:-37892173 MS.gene03509:CDS
CCACAGATGAGATCATTTCT+TGG 0.343190 6.2:-37897078 MS.gene03509:CDS
ACGGAGTGAATGATGTGTTT+TGG 0.356521 6.2:-37891952 MS.gene03509:CDS
CTTCTTTGAGAAGGCTCTAC+AGG 0.360916 6.2:-37892224 MS.gene03509:CDS
ATAACAAAAGCTTCATCGTT+TGG 0.362747 6.2:-37897048 MS.gene03509:CDS
AGAAGAACGCGAGAGAATTC+AGG 0.373908 6.2:+37897019 None:intergenic
ACGTTACCTGAAGCCTCCTT+TGG 0.398346 6.2:+37891998 None:intergenic
TAAGAAAAGGCGATTGTCTC+AGG 0.414889 6.2:-37892140 MS.gene03509:CDS
ACCAAGCTACCTTCGGCAAC+AGG 0.417714 6.2:+37892103 None:intergenic
AGCTTAGGAGTTTGGATTGA+AGG 0.419735 6.2:+37892335 None:intergenic
TTGCTGTGTTTGAAATATGT+TGG 0.421946 6.2:+37896995 None:intergenic
GCCGAGCAGCTGCTTTGACT+TGG 0.425968 6.2:+37891975 None:intergenic
TGCTGTGTTTGAAATATGTT+GGG 0.444516 6.2:+37896996 None:intergenic
TATCAAGATAATTATAGCTT+AGG 0.451761 6.2:+37892320 None:intergenic
TGGAAACTTATAATAAGAAA+AGG 0.461564 6.2:-37892153 MS.gene03509:CDS
TCTGCTTCCGTCGGCAGCAG+TGG 0.466428 6.2:+37897153 None:intergenic
CCACAGTCATAGTCATCCTC+CGG 0.469987 6.2:-37892428 MS.gene03509:CDS
GCCTGTTGCCGAAGGTAGCT+TGG 0.473073 6.2:-37892104 MS.gene03509:CDS
GAAAGCAGATCCTGATCGTT+GGG 0.475772 6.2:-37892521 MS.gene03509:CDS
TTCCCTCAAAATCAAATCCA+TGG 0.478136 6.2:-37892179 MS.gene03509:CDS
TTGGCAAACTCCCAACGATC+AGG 0.478885 6.2:+37892511 None:intergenic
GCTTAGGAGTTTGGATTGAA+GGG 0.480417 6.2:+37892336 None:intergenic
ATTATAAGTTTCCAAATCCA+TGG 0.481800 6.2:+37892162 None:intergenic
GCTGATCCAAAGGAGGCTTC+AGG 0.482903 6.2:-37892004 MS.gene03509:CDS
GAAGCCTCCTTTGGATCAGC+GGG 0.484852 6.2:+37892007 None:intergenic
TTTGCAAAACTTCTTTGAGA+AGG 0.487416 6.2:-37892233 MS.gene03509:CDS
CTTTCTGAAGGAGAACTGAC+AGG 0.491976 6.2:-37892049 MS.gene03509:CDS
AGATCCAGAAAGGGCAGCAT+TGG 0.494908 6.2:-37892395 MS.gene03509:CDS
TGATACAGAAAAGCTTCAGC+TGG 0.497298 6.2:-37892302 MS.gene03509:CDS
CGACGGAAGCAGAGAAGGTA+TGG 0.499479 6.2:-37897143 MS.gene03509:CDS
ATTGAGCTGACGGATGAAGC+TGG 0.506271 6.2:+37896967 None:intergenic
TTCTCTCAGAATCTTTCTGA+AGG 0.510971 6.2:-37892061 MS.gene03509:CDS
TCAGCGGCAATTGGATGGCA+TGG 0.513464 6.2:-37892272 MS.gene03509:CDS
TCATATGTCTTCTGAAGAAA+CGG 0.516273 6.2:+37897118 None:intergenic
AACTGACCCCGCTGATCCAA+AGG 0.526560 6.2:-37892014 MS.gene03509:CDS
GTCAAAGCAGCTGCTCGGCA+CGG 0.540320 6.2:-37891971 MS.gene03509:CDS
GAGAGAAAACATTGCTAGGA+AGG 0.540423 6.2:+37892077 None:intergenic
AACAGCATGGACTTTCAGTA+AGG 0.541453 6.2:+37891921 None:intergenic
GGAAAGCAGATCCTGATCGT+TGG 0.545857 6.2:-37892522 MS.gene03509:CDS
CCGGAGGATGACTATGACTG+TGG 0.551542 6.2:+37892428 None:intergenic
AAGGTCGACCAAGCTACCTT+CGG 0.554405 6.2:+37892096 None:intergenic
CACAGTCATAGTCATCCTCC+GGG 0.559092 6.2:-37892427 MS.gene03509:CDS
TCCAAGTCAAAGCAGCTGCT+CGG 0.561662 6.2:-37891976 MS.gene03509:CDS
TTCTGCTGTAGATCCAGAAA+GGG 0.565003 6.2:-37892404 MS.gene03509:CDS
AGAAATGATCTCATCTGTGG+TGG 0.567159 6.2:+37897081 None:intergenic
GTTCTGCTGTAGATCCAGAA+AGG 0.569845 6.2:-37892405 MS.gene03509:CDS
TTCTGAGAGAAAACATTGCT+AGG 0.570976 6.2:+37892073 None:intergenic
GACTGTGGATAGGTTTCTTG+CGG 0.574041 6.2:+37892443 None:intergenic
GCTGCCGACGGAAGCAGAGA+AGG 0.581055 6.2:-37897148 MS.gene03509:CDS
TGAAGCCTCCTTTGGATCAG+CGG 0.591974 6.2:+37892006 None:intergenic
CACATGCAGCCTGTTGCCGA+AGG 0.596050 6.2:-37892112 MS.gene03509:CDS
TTACATAGGTATTGAGCTGA+CGG 0.598207 6.2:+37896957 None:intergenic
AATTGGATGGCATGGAGAAG+AGG 0.602743 6.2:-37892264 MS.gene03509:CDS
TCATCAGCCACTGCTGCCGA+CGG 0.606067 6.2:-37897160 MS.gene03509:CDS
TCTGGATCTACAGCAGAACC+CGG 0.614712 6.2:+37892409 None:intergenic
GGATGACTATGACTGTGGAT+AGG 0.617132 6.2:+37892433 None:intergenic
TCTTCATTGTCTGAACAGCA+TGG 0.622573 6.2:+37891908 None:intergenic
CATACCTTCTCTGCTTCCGT+CGG 0.623107 6.2:+37897144 None:intergenic
GAAATGATCTCATCTGTGGT+GGG 0.624254 6.2:+37897082 None:intergenic
AGAACGCGAGAGAATTCAGG+AGG 0.628084 6.2:+37897022 None:intergenic
ATGCTGTTCAGACAATGAAG+AGG 0.637659 6.2:-37891906 MS.gene03509:CDS
TTTCTGAAGGAGAACTGACA+GGG 0.656485 6.2:-37892048 MS.gene03509:CDS
CCAAGAAATGATCTCATCTG+TGG 0.658293 6.2:+37897078 None:intergenic
TGACCCCGCTGATCCAAAGG+AGG 0.662370 6.2:-37892011 MS.gene03509:CDS
GAACGCGAGAGAATTCAGGA+GGG 0.662504 6.2:+37897023 None:intergenic
TCTTCAGAAGACATATGACA+TGG 0.665030 6.2:-37897113 MS.gene03509:CDS
GCAGTGGCTGATGATGATTG+TGG 0.706595 6.2:+37897169 None:intergenic
AAGCCTCCTTTGGATCAGCG+GGG 0.731334 6.2:+37892008 None:intergenic
GGATCTACAGCAGAACCCGG+AGG 0.744225 6.2:+37892412 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATAAAATATTTATTTT+GGG + chr6.2:37894264-37894283 None:intergenic 0.0%
!!! TATTTATAAAATATTTATTT+TGG + chr6.2:37894265-37894284 None:intergenic 0.0%
!! ATATTCTTGTAAAAATTTAA+TGG - chr6.2:37896393-37896412 MS.gene03509:intron 10.0%
!!! AATATTTTTCAAAAACTAAT+CGG - chr6.2:37894728-37894747 MS.gene03509:intron 10.0%
!!! ATCTTTTATAAATTTTTCAT+TGG + chr6.2:37896584-37896603 None:intergenic 10.0%
!! ATTTAGCTATAACTAAATTT+AGG + chr6.2:37895571-37895590 None:intergenic 15.0%
!! ATTTAGTTATAGCTAAATTA+CGG - chr6.2:37895573-37895592 MS.gene03509:intron 15.0%
!! TAAAGTTAACAAAATATCTA+AGG - chr6.2:37894096-37894115 MS.gene03509:intron 15.0%
!! TTATCATATTTATATAGTTC+AGG + chr6.2:37895856-37895875 None:intergenic 15.0%
!! TTTAGCTATAACTAAATTTA+GGG + chr6.2:37895570-37895589 None:intergenic 15.0%
!!! AAGTATGTTTTAATTTGTTA+TGG - chr6.2:37896496-37896515 MS.gene03509:intron 15.0%
!!! AATATCTAAGATATTTTGAT+AGG + chr6.2:37895422-37895441 None:intergenic 15.0%
!!! ACATTTTATAAAACAATACT+AGG - chr6.2:37892711-37892730 MS.gene03509:intron 15.0%
!!! ATGATTTGTGAATAAATATA+TGG + chr6.2:37893643-37893662 None:intergenic 15.0%
!!! TAGATATTTTGTTAACTTTA+TGG + chr6.2:37894096-37894115 None:intergenic 15.0%
!!! TATTTTTACTTCTTTTGTTT+GGG + chr6.2:37892828-37892847 None:intergenic 15.0%
!! AAAGTGATATATTATTCAGT+CGG + chr6.2:37894229-37894248 None:intergenic 20.0%
!! AATGGGAAAATTTAACATTT+AGG + chr6.2:37896153-37896172 None:intergenic 20.0%
!! AGGTAATATTTGTATAACTA+TGG + chr6.2:37896085-37896104 None:intergenic 20.0%
!! ATACTAAATTATGTCATTGT+CGG + chr6.2:37892531-37892550 None:intergenic 20.0%
!! ATGGGAAAATTTAACATTTA+GGG + chr6.2:37896152-37896171 None:intergenic 20.0%
!! ATGTGAAAGATTTGAAAATA+AGG + chr6.2:37896105-37896124 None:intergenic 20.0%
!! ATTATTTCATTGAGTTTAGT+TGG - chr6.2:37892377-37892396 MS.gene03509:CDS 20.0%
!! CATAATTACAAAAATACTGA+AGG - chr6.2:37893055-37893074 MS.gene03509:intron 20.0%
!! GTATTCTTGTAAAGATTTAA+TGG - chr6.2:37896415-37896434 MS.gene03509:intron 20.0%
!! TATCAAGATAATTATAGCTT+AGG + chr6.2:37896756-37896775 None:intergenic 20.0%
!! TCTAAAAGAAAATTTACGAT+CGG + chr6.2:37894845-37894864 None:intergenic 20.0%
!! TGATACATATAAAGAGATAA+TGG + chr6.2:37894936-37894955 None:intergenic 20.0%
!! TGATTAGTAAGATAAGAATT+AGG - chr6.2:37892337-37892356 MS.gene03509:CDS 20.0%
!! TGGAAACTTATAATAAGAAA+AGG - chr6.2:37896920-37896939 MS.gene03509:intron 20.0%
!! TTCAACACAACTAAAATTAA+TGG - chr6.2:37894995-37895014 MS.gene03509:intron 20.0%
!! TTTAGTTATAGCTAAATTAC+GGG - chr6.2:37895574-37895593 MS.gene03509:intron 20.0%
!!! ACTATTTATCATGTTTCTAT+AGG - chr6.2:37895997-37896016 MS.gene03509:intron 20.0%
!!! AGTTTTTGAAAAATATTGTC+TGG + chr6.2:37894725-37894744 None:intergenic 20.0%
!!! ATATAAAGAGATAATGGTTT+TGG + chr6.2:37894930-37894949 None:intergenic 20.0%
!!! ATTTATGTGTGCTTTTTATT+AGG - chr6.2:37896522-37896541 MS.gene03509:intron 20.0%
!!! ATTTATTTTGGGTGATTTTA+AGG + chr6.2:37894253-37894272 None:intergenic 20.0%
!!! CTATTTATCATGTTTCTATA+GGG - chr6.2:37895998-37896017 MS.gene03509:intron 20.0%
!!! GTATTTTTACTTCTTTTGTT+TGG + chr6.2:37892829-37892848 None:intergenic 20.0%
!!! TAAGACTTAAAGTATTTTCA+AGG + chr6.2:37894067-37894086 None:intergenic 20.0%
!!! TTATTTTCAAATCTTTCACA+TGG - chr6.2:37896104-37896123 MS.gene03509:intron 20.0%
!!! TTTATGTGTGCTTTTTATTA+GGG - chr6.2:37896523-37896542 MS.gene03509:intron 20.0%
!!! TTTGTTGTATTTGTATGATT+TGG - chr6.2:37892231-37892250 MS.gene03509:CDS 20.0%
! AAATAAGTTTGCAGTTCTTA+TGG - chr6.2:37896448-37896467 MS.gene03509:intron 25.0%
! AAATAGAAATCATGCACTTA+TGG - chr6.2:37896304-37896323 MS.gene03509:intron 25.0%
! AAGTGATATATTATTCAGTC+GGG + chr6.2:37894228-37894247 None:intergenic 25.0%
! AGGAAGATAAAATTTAGTCA+TGG - chr6.2:37895280-37895299 MS.gene03509:intron 25.0%
! ATAATTATAGCTTAGGAGTT+TGG + chr6.2:37896749-37896768 None:intergenic 25.0%
! ATACTGTTGAAAAGTGAAAT+AGG + chr6.2:37894661-37894680 None:intergenic 25.0%
! ATCTCTTTATATGTATCACA+CGG - chr6.2:37894938-37894957 MS.gene03509:intron 25.0%
! ATGAATTTCACGGTAAATAT+AGG - chr6.2:37895506-37895525 MS.gene03509:intron 25.0%
! ATTACACACATAAAAACTTC+AGG + chr6.2:37896368-37896387 None:intergenic 25.0%
! ATTAGGTACAACTTTAGATT+TGG - chr6.2:37892354-37892373 MS.gene03509:CDS 25.0%
! ATTATAAGTTTCCAAATCCA+TGG + chr6.2:37896914-37896933 None:intergenic 25.0%
! CCTAACATATACAATAACTT+AGG - chr6.2:37893913-37893932 MS.gene03509:intron 25.0%
! CCTAAGTTATTGTATATGTT+AGG + chr6.2:37893916-37893935 None:intergenic 25.0%
! CTTACAATAATCATATGTGT+CGG - chr6.2:37895598-37895617 MS.gene03509:intron 25.0%
! TAAAATGTGACATTTGATTC+AGG + chr6.2:37892699-37892718 None:intergenic 25.0%
! TGTCTTACTATTTGATCAAA+TGG + chr6.2:37895342-37895361 None:intergenic 25.0%
! TTCGAAAAGATGTTTCAAAA+TGG + chr6.2:37894340-37894359 None:intergenic 25.0%
! TTGTGAGTAGTAAAAATGAA+TGG + chr6.2:37895382-37895401 None:intergenic 25.0%
!! GCTCATTTCTTTTATTAATG+TGG + chr6.2:37894893-37894912 None:intergenic 25.0%
!! TGATCTTTTATGATTTCTTG+AGG + chr6.2:37894296-37894315 None:intergenic 25.0%
!!! AATGTTTTGAGAAGATAAAC+AGG + chr6.2:37894153-37894172 None:intergenic 25.0%
!!! ATGTTTTGAGAAGATAAACA+GGG + chr6.2:37894152-37894171 None:intergenic 25.0%
!!! CATTTTATCATAGTTTTGAG+TGG + chr6.2:37894364-37894383 None:intergenic 25.0%
!!! TGAGATATTATAGTCTTGTA+TGG - chr6.2:37892440-37892459 MS.gene03509:CDS 25.0%
AAATTAAGACATACGAAGCA+AGG + chr6.2:37895666-37895685 None:intergenic 30.0%
AACTTTGAATATCACCACAA+AGG - chr6.2:37893356-37893375 MS.gene03509:intron 30.0%
AGATCAAAAACATCTTCTGA+CGG - chr6.2:37896600-37896619 MS.gene03509:intron 30.0%
AGTGATATATTATTCAGTCG+GGG + chr6.2:37894227-37894246 None:intergenic 30.0%
ATAACAAAAGCTTCATCGTT+TGG - chr6.2:37892025-37892044 MS.gene03509:CDS 30.0%
ATATAGTTCAGGAACTAAAC+CGG + chr6.2:37895845-37895864 None:intergenic 30.0%
ATGGCAATGAGTAAAAACTA+AGG - chr6.2:37896323-37896342 MS.gene03509:intron 30.0%
ATTTGAATGTAACACCTCTA+TGG + chr6.2:37893329-37893348 None:intergenic 30.0%
CAAAATCAAATCCATGGATT+TGG - chr6.2:37896900-37896919 MS.gene03509:intron 30.0%
CTTCATCGAATTTCAATTAG+TGG - chr6.2:37892265-37892284 MS.gene03509:CDS 30.0%
CTTTACATTAATTCGTGGAT+CGG + chr6.2:37893016-37893035 None:intergenic 30.0%
GATCAAATAGTAAGACATGT+GGG - chr6.2:37895345-37895364 MS.gene03509:intron 30.0%
GATCCACGAATTAATGTAAA+GGG - chr6.2:37893015-37893034 MS.gene03509:intron 30.0%
GTATTAAGTCTACATTTGCT+AGG + chr6.2:37893153-37893172 None:intergenic 30.0%
GTGGTGATTAATCTTAGTTA+AGG + chr6.2:37895189-37895208 None:intergenic 30.0%
TAATTTAACGCGTCTAATCT+CGG - chr6.2:37895477-37895496 MS.gene03509:intron 30.0%
TACTATTTGATCAAATGGCT+AGG + chr6.2:37895337-37895356 None:intergenic 30.0%
TATGTGGCGATATTCAATTT+CGG + chr6.2:37893216-37893235 None:intergenic 30.0%
TCATGGAACTTGTCTTAAAT+AGG - chr6.2:37895297-37895316 MS.gene03509:intron 30.0%
TCTGAATATCACACTATTTC+CGG - chr6.2:37895823-37895842 MS.gene03509:intron 30.0%
TGATCAAATAGTAAGACATG+TGG - chr6.2:37895344-37895363 MS.gene03509:intron 30.0%
TGGGAATAAAACTTGAAGTA+AGG + chr6.2:37895125-37895144 None:intergenic 30.0%
TGTTACATTCAAATGACTCT+AGG - chr6.2:37893250-37893269 MS.gene03509:intron 30.0%
TTAATCTTAGTTAAGGTGCA+AGG + chr6.2:37895182-37895201 None:intergenic 30.0%
TTGTAGAGCTGTACATTATA+AGG + chr6.2:37893844-37893863 None:intergenic 30.0%
TTTACATTAATTCGTGGATC+GGG + chr6.2:37893015-37893034 None:intergenic 30.0%
! AAGAATATTTCTACAGCATC+TGG - chr6.2:37895749-37895768 MS.gene03509:intron 30.0%
! ATGACTAACATGGGAAATTT+TGG + chr6.2:37896052-37896071 None:intergenic 30.0%
! GCATCATTATATTTTGTGTG+AGG + chr6.2:37893122-37893141 None:intergenic 30.0%
! GCTTCGTATGTCTTAATTTT+CGG - chr6.2:37895667-37895686 MS.gene03509:intron 30.0%
! TAGCATGAATTGACTTACAT+AGG + chr6.2:37892133-37892152 None:intergenic 30.0%
! TATCATGTTTCTATAGGGTA+GGG - chr6.2:37896003-37896022 MS.gene03509:intron 30.0%
! TCATATGTCTTCTGAAGAAA+CGG + chr6.2:37891958-37891977 None:intergenic 30.0%
! TGACTAACATGGGAAATTTT+GGG + chr6.2:37896051-37896070 None:intergenic 30.0%
! TGCTGTGTTTGAAATATGTT+GGG + chr6.2:37892080-37892099 None:intergenic 30.0%
! TTATCATGTTTCTATAGGGT+AGG - chr6.2:37896002-37896021 MS.gene03509:intron 30.0%
! TTGCTGTGTTTGAAATATGT+TGG + chr6.2:37892081-37892100 None:intergenic 30.0%
! TTTGCAAAACTTCTTTGAGA+AGG - chr6.2:37896840-37896859 MS.gene03509:intron 30.0%
!! AATCCATGGATTTGATTTTG+AGG + chr6.2:37896900-37896919 None:intergenic 30.0%
!! ATCCATGGATTTGATTTTGA+GGG + chr6.2:37896899-37896918 None:intergenic 30.0%
!! GTGCTTTTTATTAGGGATTT+CGG - chr6.2:37896530-37896549 MS.gene03509:intron 30.0%
!! TATGTCTTAATTTTCGGTGT+GGG - chr6.2:37895673-37895692 MS.gene03509:intron 30.0%
!! TTTGATTCAGGTTGTATTGT+TGG + chr6.2:37892687-37892706 None:intergenic 30.0%
!!! TGCACTCTTGTTTTGAAAAT+CGG + chr6.2:37892566-37892585 None:intergenic 30.0%
!!! TGTTTTGAGAAGATAAACAG+GGG + chr6.2:37894151-37894170 None:intergenic 30.0%
AAAACTCCCTATTTGGATGT+GGG - chr6.2:37892983-37893002 MS.gene03509:intron 35.0%
AAAACTTCAGGAAGCAAATC+TGG + chr6.2:37896356-37896375 None:intergenic 35.0%
AGACACATCATGACTAACAT+GGG + chr6.2:37896061-37896080 None:intergenic 35.0%
AGGATTGAATATCACCACAA+AGG - chr6.2:37893440-37893459 MS.gene03509:intron 35.0%
ATCCTAAATCCTTTAGTGCA+TGG + chr6.2:37892617-37892636 None:intergenic 35.0%
ATTGCAAACAAATCCCACAT+TGG - chr6.2:37893701-37893720 MS.gene03509:intron 35.0%
CATGGTAGTATCATTTACAG+CGG - chr6.2:37892800-37892819 MS.gene03509:intron 35.0%
CGATCCACGAATTAATGTAA+AGG - chr6.2:37893014-37893033 MS.gene03509:intron 35.0%
CGCGTTAAATTAGAAACATG+AGG + chr6.2:37895469-37895488 None:intergenic 35.0%
GAAATTGAATATCGCCACAT+AGG - chr6.2:37893215-37893234 MS.gene03509:intron 35.0%
GACATGAGAATGTTGAAAGA+TGG - chr6.2:37892416-37892435 MS.gene03509:CDS 35.0%
GCTGTAAATGATACTACCAT+GGG + chr6.2:37892801-37892820 None:intergenic 35.0%
GGCTGAAATGGAAAAGAAAA+AGG - chr6.2:37895095-37895114 MS.gene03509:intron 35.0%
GTTTGAGTATTCATTTCCCA+TGG - chr6.2:37892782-37892801 MS.gene03509:intron 35.0%
TAGTTACTTAAATGCCTGGA+TGG + chr6.2:37893781-37893800 None:intergenic 35.0%
TCCAGGCATTTAAGTAACTA+TGG - chr6.2:37893781-37893800 MS.gene03509:intron 35.0%
TCCATAGTTACTTAAATGCC+TGG + chr6.2:37893785-37893804 None:intergenic 35.0%
TCTTCAGAAGACATATGACA+TGG - chr6.2:37891960-37891979 MS.gene03509:CDS 35.0%
TGACCCTTTACATTAATTCG+TGG + chr6.2:37893021-37893040 None:intergenic 35.0%
TGACGCATTTCATATACTTC+AGG + chr6.2:37895885-37895904 None:intergenic 35.0%
TTATAAGGAATGCTTTGCTC+AGG + chr6.2:37893829-37893848 None:intergenic 35.0%
TTCCCTCAAAATCAAATCCA+TGG - chr6.2:37896894-37896913 MS.gene03509:intron 35.0%
TTCTCTCAGAATCTTTCTGA+AGG - chr6.2:37897012-37897031 MS.gene03509:CDS 35.0%
TTGCAAACAAATCCCACATT+GGG - chr6.2:37893702-37893721 MS.gene03509:intron 35.0%
! AAATAGGGAGTTTTCTTTGC+GGG + chr6.2:37892977-37892996 None:intergenic 35.0%
! AAGAAGAGAAATGACGGAAA+TGG - chr6.2:37895217-37895236 MS.gene03509:intron 35.0%
! AAGTGAAATAGGTTGACCAA+TGG + chr6.2:37894650-37894669 None:intergenic 35.0%
! ATAATCATATGTGTCGGTGT+CGG - chr6.2:37895604-37895623 MS.gene03509:intron 35.0%
! CAAATAGGGAGTTTTCTTTG+CGG + chr6.2:37892978-37892997 None:intergenic 35.0%
! CAGCTTAGATGTTTTACTTG+TGG + chr6.2:37892866-37892885 None:intergenic 35.0%
! GTAGGGACTAAATTTGAGAT+AGG - chr6.2:37896020-37896039 MS.gene03509:intron 35.0%
! GTATGTCTTAATTTTCGGTG+TGG - chr6.2:37895672-37895691 MS.gene03509:intron 35.0%
! TTCTGAGAGAAAACATTGCT+AGG + chr6.2:37897003-37897022 None:intergenic 35.0%
!! AGTTAGAAGATTAGCTTGCT+TGG + chr6.2:37895145-37895164 None:intergenic 35.0%
!! ATGGCTAGGATTATTTTGTG+TGG + chr6.2:37895323-37895342 None:intergenic 35.0%
!! GTTAGAAGATTAGCTTGCTT+GGG + chr6.2:37895144-37895163 None:intergenic 35.0%
!! TGTATTTTCGAGAGTTGCTA+AGG + chr6.2:37893980-37893999 None:intergenic 35.0%
!! TTACATAGGTATTGAGCTGA+CGG + chr6.2:37892119-37892138 None:intergenic 35.0%
!!! GCACTCTTGTTTTGAAAATC+GGG + chr6.2:37892565-37892584 None:intergenic 35.0%
!!! GGTTCACGTTTTATTTCAAG+AGG - chr6.2:37895256-37895275 MS.gene03509:intron 35.0%
!!! TGTATCACACGGTTTTGAAA+AGG - chr6.2:37894949-37894968 MS.gene03509:intron 35.0%
!!! TTTTGAGACGAATGTCATGT+TGG + chr6.2:37894043-37894062 None:intergenic 35.0%
AAACTCCCTATTTGGATGTG+GGG - chr6.2:37892984-37893003 MS.gene03509:intron 40.0%
AAATGGAGTTCCAAGAGGAA+GGG - chr6.2:37895234-37895253 MS.gene03509:intron 40.0%
AACAGCATGGACTTTCAGTA+AGG + chr6.2:37897155-37897174 None:intergenic 40.0%
AACTCAATGCCATGCACTAA+AGG - chr6.2:37892605-37892624 MS.gene03509:intron 40.0%
AACTCGTAAGCATCTACATC+AGG - chr6.2:37893862-37893881 MS.gene03509:intron 40.0%
ACGAAAAGACTGAACTGTTC+AGG + chr6.2:37894702-37894721 None:intergenic 40.0%
AGAAATGATCTCATCTGTGG+TGG + chr6.2:37891995-37892014 None:intergenic 40.0%
AGCTTAGGAGTTTGGATTGA+AGG + chr6.2:37896741-37896760 None:intergenic 40.0%
ATGCTGTTCAGACAATGAAG+AGG - chr6.2:37897167-37897186 MS.gene03509:CDS 40.0%
ATGTTAGGATACTTAGCTCG+AGG + chr6.2:37893901-37893920 None:intergenic 40.0%
ATTTGAATGTAACACCCCTG+TGG + chr6.2:37893244-37893263 None:intergenic 40.0%
CAGACACATCATGACTAACA+TGG + chr6.2:37896062-37896081 None:intergenic 40.0%
CCAAGAAATGATCTCATCTG+TGG + chr6.2:37891998-37892017 None:intergenic 40.0%
CCACAGATGAGATCATTTCT+TGG - chr6.2:37891995-37892014 MS.gene03509:CDS 40.0%
CGAAAAGACTGAACTGTTCA+GGG + chr6.2:37894701-37894720 None:intergenic 40.0%
CGCAAAGAAAACTCCCTATT+TGG - chr6.2:37892976-37892995 MS.gene03509:intron 40.0%
CGCTGTAAATGATACTACCA+TGG + chr6.2:37892802-37892821 None:intergenic 40.0%
CTGATCCTTAACTCTGAACT+GGG - chr6.2:37892883-37892902 MS.gene03509:intron 40.0%
CTTTCACATGGCAAACCTAT+GGG - chr6.2:37896116-37896135 MS.gene03509:intron 40.0%
GAAAACTCCCTATTTGGATG+TGG - chr6.2:37892982-37893001 MS.gene03509:intron 40.0%
GAAAAGACTGAACTGTTCAG+GGG + chr6.2:37894700-37894719 None:intergenic 40.0%
GAAATGATCTCATCTGTGGT+GGG + chr6.2:37891994-37892013 None:intergenic 40.0%
GACTTTGAATACCACCACAA+AGG - chr6.2:37893271-37893290 MS.gene03509:intron 40.0%
GAGAGAAAACATTGCTAGGA+AGG + chr6.2:37896999-37897018 None:intergenic 40.0%
GAGAGGAAGAAGAGAAATGA+CGG - chr6.2:37895211-37895230 MS.gene03509:intron 40.0%
GCTAAGGTTTCACCTAGAAT+GGG + chr6.2:37893964-37893983 None:intergenic 40.0%
GCTTAGGAGTTTGGATTGAA+GGG + chr6.2:37896740-37896759 None:intergenic 40.0%
GCTTTCTATGTAACTGACTG+CGG + chr6.2:37894532-37894551 None:intergenic 40.0%
GGTATGCGATGTAAACACAA+AGG + chr6.2:37894413-37894432 None:intergenic 40.0%
TAAAGCTTCCTACCCATTCT+AGG - chr6.2:37893949-37893968 MS.gene03509:intron 40.0%
TAAGAAAAGGCGATTGTCTC+AGG - chr6.2:37896933-37896952 MS.gene03509:intron 40.0%
TACGAGTATGACACCTATCA+CGG - chr6.2:37893170-37893189 MS.gene03509:intron 40.0%
TCGGTCATGGATGAATTTCA+CGG - chr6.2:37895496-37895515 MS.gene03509:intron 40.0%
TCTTCATTGTCTGAACAGCA+TGG + chr6.2:37897168-37897187 None:intergenic 40.0%
TCTTTCACATGGCAAACCTA+TGG - chr6.2:37896115-37896134 MS.gene03509:intron 40.0%
TGAATGTAACACCTCTATGG+CGG + chr6.2:37893326-37893345 None:intergenic 40.0%
TGAATGTAACACCTCTATGG+TGG + chr6.2:37893326-37893345 None:intergenic 40.0%
TGAATGTGTTTGCCCAATGT+GGG + chr6.2:37893717-37893736 None:intergenic 40.0%
TGATACAGAAAAGCTTCAGC+TGG - chr6.2:37896771-37896790 MS.gene03509:intron 40.0%
TGCCATGCACTAAAGGATTT+AGG - chr6.2:37892612-37892631 MS.gene03509:intron 40.0%
TGCTAAGGTTTCACCTAGAA+TGG + chr6.2:37893965-37893984 None:intergenic 40.0%
TGTTAGGATACTTAGCTCGA+GGG + chr6.2:37893900-37893919 None:intergenic 40.0%
TTCTGCTGTAGATCCAGAAA+GGG - chr6.2:37896669-37896688 MS.gene03509:intron 40.0%
TTGTGGTGATAACACCTTAG+TGG + chr6.2:37893300-37893319 None:intergenic 40.0%
TTTCTACAGCATCTGGATCT+TGG - chr6.2:37895756-37895775 MS.gene03509:intron 40.0%
TTTCTTTGCGGGAATAGCAA+AGG + chr6.2:37892966-37892985 None:intergenic 40.0%
! ACGGAGTGAATGATGTGTTT+TGG - chr6.2:37897121-37897140 MS.gene03509:CDS 40.0%
! CGGAGTGAATGATGTGTTTT+GGG - chr6.2:37897122-37897141 MS.gene03509:CDS 40.0%
! CTAAGGTGTTATCACCACAA+AGG - chr6.2:37893300-37893319 MS.gene03509:intron 40.0%
! GAAGGCATAACATACTAGCA+TGG - chr6.2:37893073-37893092 MS.gene03509:intron 40.0%
! TTCAGCTGGAAGATTTTCAG+CGG - chr6.2:37896785-37896804 MS.gene03509:intron 40.0%
! TTTCTGAAGGAGAACTGACA+GGG - chr6.2:37897025-37897044 MS.gene03509:CDS 40.0%
!! GGTGTTGGTATGCACTTAAT+GGG + chr6.2:37896170-37896189 None:intergenic 40.0%
!!! CACGTTTTATTTCAAGAGGC+AGG - chr6.2:37895260-37895279 MS.gene03509:intron 40.0%
AACTCTGAACTGGGATGACA+GGG - chr6.2:37892892-37892911 MS.gene03509:intron 45.0%
AAGATTAATCACCACGCGAG+AGG - chr6.2:37895194-37895213 MS.gene03509:intron 45.0%
AAGGCTAGAAAATGCCACAC+AGG - chr6.2:37893574-37893593 MS.gene03509:intron 45.0%
AATGGAGTTCCAAGAGGAAG+GGG - chr6.2:37895235-37895254 MS.gene03509:intron 45.0%
AATTGGATGGCATGGAGAAG+AGG - chr6.2:37896809-37896828 MS.gene03509:intron 45.0%
ACGAGTATGACACCTATCAC+GGG - chr6.2:37893171-37893190 MS.gene03509:intron 45.0%
ACTTCAGGAAGCAAATCTGG+TGG + chr6.2:37896353-37896372 None:intergenic 45.0%
AGAAGAACGCGAGAGAATTC+AGG + chr6.2:37892057-37892076 None:intergenic 45.0%
AGATGGTCGAAATGGACCTA+TGG + chr6.2:37894614-37894633 None:intergenic 45.0%
AGGAATGCTTTGCTCAGGTA+AGG + chr6.2:37893824-37893843 None:intergenic 45.0%
AGGGTACAAGATCCTTCCAA+TGG - chr6.2:37892911-37892930 MS.gene03509:intron 45.0%
AGGTTTCACCTAGAATGGGT+AGG + chr6.2:37893960-37893979 None:intergenic 45.0%
CAATAGCACGTAAACCATCC+AGG - chr6.2:37893764-37893783 MS.gene03509:intron 45.0%
CGTAGACATCTCAAGCATCT+AGG - chr6.2:37896227-37896246 MS.gene03509:intron 45.0%
CTTTGCCCCACATCCAAATA+GGG + chr6.2:37892992-37893011 None:intergenic 45.0%
GAAACATGAGGCCAATGATG+TGG + chr6.2:37895457-37895476 None:intergenic 45.0%
GAAAGCAGATCCTGATCGTT+GGG - chr6.2:37896552-37896571 MS.gene03509:intron 45.0%
GAAATGGAGTTCCAAGAGGA+AGG - chr6.2:37895233-37895252 MS.gene03509:intron 45.0%
GAATGCTTTGCTCAGGTAAG+GGG + chr6.2:37893822-37893841 None:intergenic 45.0%
GACTGTGGATAGGTTTCTTG+CGG + chr6.2:37896633-37896652 None:intergenic 45.0%
GCTGATCCTTAACTCTGAAC+TGG - chr6.2:37892882-37892901 MS.gene03509:intron 45.0%
GGAATGCTTTGCTCAGGTAA+GGG + chr6.2:37893823-37893842 None:intergenic 45.0%
GGATGACTATGACTGTGGAT+AGG + chr6.2:37896643-37896662 None:intergenic 45.0%
GGGGAAAGAAAAGTCTTTGC+AGG + chr6.2:37894132-37894151 None:intergenic 45.0%
GTCATCCCAGTTCAGAGTTA+AGG + chr6.2:37892891-37892910 None:intergenic 45.0%
GTGAATGTGTTTGCCCAATG+TGG + chr6.2:37893718-37893737 None:intergenic 45.0%
GTTCTGCTGTAGATCCAGAA+AGG - chr6.2:37896668-37896687 MS.gene03509:intron 45.0%
TAACTCTGAACTGGGATGAC+AGG - chr6.2:37892891-37892910 MS.gene03509:intron 45.0%
TAGGGTTCCAAAACACCCAT+AGG + chr6.2:37896134-37896153 None:intergenic 45.0%
TCCATTTCAGCCGTGTATGT+GGG + chr6.2:37895087-37895106 None:intergenic 45.0%
TCCCAACAAACCCACATACA+CGG - chr6.2:37895074-37895093 MS.gene03509:intron 45.0%
TCGTCATTGTTTAGCCTGTG+TGG + chr6.2:37893591-37893610 None:intergenic 45.0%
TGGTGATAACACCTTAGTGG+TGG + chr6.2:37893297-37893316 None:intergenic 45.0%
TGTCCTCTATGCCACATCAT+TGG - chr6.2:37895443-37895462 MS.gene03509:intron 45.0%
TGTGGTAGAGTGAGTCTATG+TGG + chr6.2:37894875-37894894 None:intergenic 45.0%
TGTTAGATTGACTGAGCCAG+AGG + chr6.2:37894440-37894459 None:intergenic 45.0%
TTCCATTTCAGCCGTGTATG+TGG + chr6.2:37895088-37895107 None:intergenic 45.0%
! CTTCTTTGAGAAGGCTCTAC+AGG - chr6.2:37896849-37896868 MS.gene03509:intron 45.0%
! CTTTCTGAAGGAGAACTGAC+AGG - chr6.2:37897024-37897043 MS.gene03509:CDS 45.0%
! GATTTTCAGCGGCAATTGGA+TGG - chr6.2:37896796-37896815 MS.gene03509:intron 45.0%
! GGAAGATTTTCAGCGGCAAT+TGG - chr6.2:37896792-37896811 MS.gene03509:intron 45.0%
! TGGCAAACCTATGGGTGTTT+TGG - chr6.2:37896124-37896143 MS.gene03509:intron 45.0%
! TGTGAATTGGTGGGTGATTG+AGG - chr6.2:37895698-37895717 MS.gene03509:intron 45.0%
!! GGGTGTTGGTATGCACTTAA+TGG + chr6.2:37896171-37896190 None:intergenic 45.0%
!! GTGGCATTTTCTAGCCTTTG+TGG + chr6.2:37893572-37893591 None:intergenic 45.0%
AAACGTGAACCCCTTCCTCT+TGG + chr6.2:37895247-37895266 None:intergenic 50.0%
AACGCGTCTAATCTCGGTCA+TGG - chr6.2:37895483-37895502 MS.gene03509:intron 50.0%
AAGGTCGACCAAGCTACCTT+CGG + chr6.2:37896980-37896999 None:intergenic 50.0%
ACCCACATACACGGCTGAAA+TGG - chr6.2:37895083-37895102 MS.gene03509:intron 50.0%
ACGTTACCTGAAGCCTCCTT+TGG + chr6.2:37897078-37897097 None:intergenic 50.0%
AGAACGCGAGAGAATTCAGG+AGG + chr6.2:37892054-37892073 None:intergenic 50.0%
AGATCCAGAAAGGGCAGCAT+TGG - chr6.2:37896678-37896697 MS.gene03509:intron 50.0%
AGCCGTGTATGTGGGTTTGT+TGG + chr6.2:37895079-37895098 None:intergenic 50.0%
AGGCCAATGATGTGGCATAG+AGG + chr6.2:37895449-37895468 None:intergenic 50.0%
CACAGTCATAGTCATCCTCC+GGG - chr6.2:37896646-37896665 MS.gene03509:intron 50.0%
CAGGAAGCAAATCTGGTGGT+GGG + chr6.2:37896349-37896368 None:intergenic 50.0%
CATACCTTCTCTGCTTCCGT+CGG + chr6.2:37891932-37891951 None:intergenic 50.0%
CCACAGTCATAGTCATCCTC+CGG - chr6.2:37896645-37896664 MS.gene03509:intron 50.0%
GAACGCGAGAGAATTCAGGA+GGG + chr6.2:37892053-37892072 None:intergenic 50.0%
GACGGAAATGGAGTTCCAAG+AGG - chr6.2:37895229-37895248 MS.gene03509:intron 50.0%
GCTTTGCCCCACATCCAAAT+AGG + chr6.2:37892993-37893012 None:intergenic 50.0%
GGAAAGCAGATCCTGATCGT+TGG - chr6.2:37896551-37896570 MS.gene03509:intron 50.0%
GTGTGGGTGTGTGAATTGGT+GGG - chr6.2:37895689-37895708 MS.gene03509:intron 50.0%
TACGAAGCAAGGACACTCCT+CGG + chr6.2:37895655-37895674 None:intergenic 50.0%
TCAGGAAGCAAATCTGGTGG+TGG + chr6.2:37896350-37896369 None:intergenic 50.0%
TCAGGCTTGATGCCATTGGA+AGG + chr6.2:37892926-37892945 None:intergenic 50.0%
TCCAAGTCAAAGCAGCTGCT+CGG - chr6.2:37897097-37897116 MS.gene03509:CDS 50.0%
TCTGGATCTACAGCAGAACC+CGG + chr6.2:37896667-37896686 None:intergenic 50.0%
TGAAGCCTCCTTTGGATCAG+CGG + chr6.2:37897070-37897089 None:intergenic 50.0%
TGAATGTAACACCCCTGTGG+TGG + chr6.2:37893241-37893260 None:intergenic 50.0%
TGCGGGAATAGCAAAGGCTT+TGG + chr6.2:37892960-37892979 None:intergenic 50.0%
TTCATGTGACGACCCGTGAT+AGG + chr6.2:37893186-37893205 None:intergenic 50.0%
TTCTCCAATGCTGCCCTTTC+TGG + chr6.2:37896685-37896704 None:intergenic 50.0%
TTGGCAAACTCCCAACGATC+AGG + chr6.2:37896565-37896584 None:intergenic 50.0%
TTGTGGTGTACATGCCTTCG+TGG + chr6.2:37893555-37893574 None:intergenic 50.0%
TTTCTCTTCTTCCTCTCGCG+TGG + chr6.2:37895208-37895227 None:intergenic 50.0%
! ATTGAGCTGACGGATGAAGC+TGG + chr6.2:37892109-37892128 None:intergenic 50.0%
! CGAAGGCATGTACACCACAA+AGG - chr6.2:37893555-37893574 MS.gene03509:intron 50.0%
! GCAGTGGCTGATGATGATTG+TGG + chr6.2:37891907-37891926 None:intergenic 50.0%
! GCCGTGTATGTGGGTTTGTT+GGG + chr6.2:37895078-37895097 None:intergenic 50.0%
! GGGAATAGCAAAGGCTTTGG+AGG + chr6.2:37892957-37892976 None:intergenic 50.0%
! TTCGGTGTGGGTGTGTGAAT+TGG - chr6.2:37895685-37895704 MS.gene03509:intron 50.0%
AACTGACCCCGCTGATCCAA+AGG - chr6.2:37897059-37897078 MS.gene03509:CDS 55.0%
AAGCCTCCTTTGGATCAGCG+GGG + chr6.2:37897068-37897087 None:intergenic 55.0%
ACATCGCATACCAGAGCCTC+TGG - chr6.2:37894421-37894440 MS.gene03509:intron 55.0%
ACCAAGCTACCTTCGGCAAC+AGG + chr6.2:37896973-37896992 None:intergenic 55.0%
ATGGATTCGCCTCGTCGAGA+TGG + chr6.2:37894631-37894650 None:intergenic 55.0%
ATTGACTGAGCCAGAGGCTC+TGG + chr6.2:37894434-37894453 None:intergenic 55.0%
CACCACAAAGGCCACCACTA+AGG - chr6.2:37893283-37893302 MS.gene03509:intron 55.0%
CACCACAAAGGCCACCATAG+AGG - chr6.2:37893312-37893331 MS.gene03509:intron 55.0%
CACCTCTATGGTGGCCTTTG+TGG + chr6.2:37893317-37893336 None:intergenic 55.0%
CACCTTAGTGGTGGCCTTTG+TGG + chr6.2:37893288-37893307 None:intergenic 55.0%
CCACAAAGGCTACACCACGA+AGG - chr6.2:37893538-37893557 MS.gene03509:intron 55.0%
CCATTTCGACCATCTCGACG+AGG - chr6.2:37894619-37894638 MS.gene03509:intron 55.0%
CCGGAGGATGACTATGACTG+TGG + chr6.2:37896648-37896667 None:intergenic 55.0%
CCTCGTCGAGATGGTCGAAA+TGG + chr6.2:37894622-37894641 None:intergenic 55.0%
CCTTCGTGGTGTAGCCTTTG+TGG + chr6.2:37893541-37893560 None:intergenic 55.0%
CGACGGAAGCAGAGAAGGTA+TGG - chr6.2:37891930-37891949 MS.gene03509:CDS 55.0%
CTTAGTGGTGGCCTTTGTGG+TGG + chr6.2:37893285-37893304 None:intergenic 55.0%
GAAGCCTCCTTTGGATCAGC+GGG + chr6.2:37897069-37897088 None:intergenic 55.0%
GATTAGGTGCGTCCTGGTGT+CGG + chr6.2:37895633-37895652 None:intergenic 55.0%
GCAAGGACACTCCTCGGATT+AGG + chr6.2:37895649-37895668 None:intergenic 55.0%
GCAGTCAGGCTTGATGCCAT+TGG + chr6.2:37892930-37892949 None:intergenic 55.0%
GCTGATCCAAAGGAGGCTTC+AGG - chr6.2:37897069-37897088 MS.gene03509:CDS 55.0%
GGTGTGGGTGTGTGAATTGG+TGG - chr6.2:37895688-37895707 MS.gene03509:intron 55.0%
GGTTCGCGACGTTTCGACAA+CGG + chr6.2:37894593-37894612 None:intergenic 55.0%
GTCGAAACGTCGCGAACCAT+AGG - chr6.2:37894595-37894614 MS.gene03509:intron 55.0%
TCAGCGGCAATTGGATGGCA+TGG - chr6.2:37896801-37896820 MS.gene03509:intron 55.0%
TCTCGACGAGGCGAATCCAT+TGG - chr6.2:37894631-37894650 MS.gene03509:intron 55.0%
!! GCTTTGGAGGTGTAGCAGTC+AGG + chr6.2:37892944-37892963 None:intergenic 55.0%
ACCAGGACGCACCTAATCCG+AGG - chr6.2:37895635-37895654 MS.gene03509:intron 60.0%
ATCGCCACATAGGCCACCAC+AGG - chr6.2:37893225-37893244 MS.gene03509:intron 60.0%
CACATGCAGCCTGTTGCCGA+AGG - chr6.2:37896961-37896980 MS.gene03509:CDS 60.0%
CACCACAAAGGCCGCCATAG+AGG - chr6.2:37893397-37893416 MS.gene03509:intron 60.0%
CACCTCTATGGCGGCCTTTG+TGG + chr6.2:37893402-37893421 None:intergenic 60.0%
GCCTGTTGCCGAAGGTAGCT+TGG - chr6.2:37896969-37896988 MS.gene03509:CDS 60.0%
GGATCTACAGCAGAACCCGG+AGG + chr6.2:37896664-37896683 None:intergenic 60.0%
GTCAAAGCAGCTGCTCGGCA+CGG - chr6.2:37897102-37897121 MS.gene03509:CDS 60.0%
TCATCAGCCACTGCTGCCGA+CGG - chr6.2:37891913-37891932 MS.gene03509:CDS 60.0%
TCGCCACATAGGCCACCACA+GGG - chr6.2:37893226-37893245 MS.gene03509:intron 60.0%
TGACCCCGCTGATCCAAAGG+AGG - chr6.2:37897062-37897081 MS.gene03509:CDS 60.0%
! GCCGAGCAGCTGCTTTGACT+TGG + chr6.2:37897101-37897120 None:intergenic 60.0%
! TCCTCGGATTAGGTGCGTCC+TGG + chr6.2:37895639-37895658 None:intergenic 60.0%
CACCCCTGTGGTGGCCTATG+TGG + chr6.2:37893232-37893251 None:intergenic 65.0%
CGCCACATAGGCCACCACAG+GGG - chr6.2:37893227-37893246 MS.gene03509:intron 65.0%
GCTGCCGACGGAAGCAGAGA+AGG - chr6.2:37891925-37891944 MS.gene03509:CDS 65.0%
TCTGCTTCCGTCGGCAGCAG+TGG + chr6.2:37891923-37891942 None:intergenic 65.0%
! CGGTGTCGGACACCGACACC+AGG - chr6.2:37895618-37895637 MS.gene03509:intron 70.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 37891892 37897203 37891892 ID=MS.gene03509
chr6.2 mRNA 37891892 37897203 37891892 ID=MS.gene03509.t1;Parent=MS.gene03509
chr6.2 exon 37896961 37897203 37896961 ID=MS.gene03509.t1.exon1;Parent=MS.gene03509.t1
chr6.2 CDS 37896961 37897203 37896961 ID=cds.MS.gene03509.t1;Parent=MS.gene03509.t1
chr6.2 exon 37891892 37892551 37891892 ID=MS.gene03509.t1.exon2;Parent=MS.gene03509.t1
chr6.2 CDS 37891892 37892551 37891892 ID=cds.MS.gene03509.t1;Parent=MS.gene03509.t1
Gene Sequence

>MS.gene03509

ATGAATTCTGCACCACAATCATCATCAGCCACTGCTGCCGACGGAAGCAGAGAAGGTATGGCACCGTTTCTTCAGAAGACATATGACATGGTAGATGATCCCACCACAGATGAGATCATTTCTTGGAGCTCTGATAACAAAAGCTTCATCGTTTGGAACCCTCCTGAATTCTCTCGCGTTCTTCTCCCAACATATTTCAAACACAGCAATTTCTCCAGCTTCATCCGTCAGCTCAATACCTATGTAAGTCAATTCATGCTATAAGCTTCTTTTGATTATTTCATTGTTACTTTGTATGATCAATTAGTTATTGTCTTTCACTGTGTTTTTGCTTGATTGTTTGTTGTATTTGTATGATTTGGTTTCATTGTGTCTTCATCGAATTTCAATTAGTGGATATTGATTATTATGATGATCATGATCATTAAGAGATTGATGAAAAAAATGATTAGTAAGATAAGAATTAGGTACAACTTTAGATTTGGATTATTTCATTGAGTTTAGTTGGAGATACAAAATGTTGAGACATGAGAATGTTGAAAGATGGATGAGATATTATAGTCTTGTATGGCACTTTTATTCTATGAAACATAAAACACAGACATCAAACACGACACAAACAACGAAACACAAACACCGACAATGACATAATTTAGTATAATTGTAACAGCCCGATTTTCAAAACAAGAGTGCATTTTTTTTCTTTTTAAAATAACTCAATGCCATGCACTAAAGGATTTAGGATCGTCTTTAATTTAAAATCATAGTAAGTAAAACATTTTGAAAGCATTACCAACAATACAACCTGAATCAAATGTCACATTTTATAAAACAATACTAGGCAATGAGCTTTTAATATCAAATCATGCACTGCGAAAGTATAAATTAGTGTTTGAGTATTCATTTCCCATGGTAGTATCATTTACAGCGGTGCCCAAACAAAAGAAGTAAAAATACATCAACATAAGACACCACAAGTAAAACATCTAAGCTGATCCTTAACTCTGAACTGGGATGACAGGGTACAAGATCCTTCCAATGGCATCAAGCCTGACTGCTACACCTCCAAAGCCTTTGCTATTCCCGCAAAGAAAACTCCCTATTTGGATGTGGGGCAAAGCCCGATCCACGAATTAATGTAAAGGGTCACGATCTAATAACAACATAATTACAAAAATACTGAAGGCATAACATACTAGCATGGTAAATAGCATCAACATAAACATTCCTCACACAAAATATAATGATGCACAATTAGCCTAGCAAATGTAGACTTAATACGAGTATGACACCTATCACGGGTCGTCACATGAAACTGATTCCGAAATTGAATATCGCCACATAGGCCACCACAGGGGTGTTACATTCAAATGACTCTAGACTTTGAATACCACCACAAAGGCCACCACTAAGGTGTTATCACCACAAAGGCCACCATAGAGGTGTTACATTCAAATGACTCTGAACTTTGAATATCACCACAAAGGCCACCACTAAGGTGTTATCACCACAAAGGCCGCCATAGAGGTGTTACATTCAAATGACTCTAGGATTGAATATCACCACAAAGGCCACCACTAAGGTGTTATCACCACAAAGGCCACCATAGAGGTGTTACATTCAAATGACTCTAGGATTGAATATCACCACAAAGGCTACACCACGAAGGCATGTACACCACAAAGGCTAGAAAATGCCACACAGGCTAAACAATGACGATTACAACTTTTAACATATCAACAGACATTCCATATATTTATTCACAAATCATATGAAAGCAAAGCACATCAACATATCATAATCACATTGATTGCAAACAAATCCCACATTGGGCAAACACATTCACTTAACATATTATATTCACAATACACACAATAGCACGTAAACCATCCAGGCATTTAAGTAACTATGGAGTTTCAAGAAAGTGCCCCTTACCTGAGCAAAGCATTCCTTATAATGTACAGCTCTACAACTCGTAAGCATCTACATCAGGAACGTCTCTAAACCCTCGAGCTAAGTATCCTAACATATACAATAACTTAGGTAAATATCGACTCTAAAGCTTCCTACCCATTCTAGGTGAAACCTTAGCAACTCTCGAAAATACAATCAACTTCGATATTTTCTAAAACATAAATAAAATATTTTCCAACATGACATTCGTCTCAAAATCCTTGAAAATACTTTAAGTCTTATCATGACCATAAAGTTAACAAAATATCTAAGGAAATTCTTTTCCTGCAAAGACTTTTCTTTCCCCTGTTTATCTTCTCAAAACATTTTTAATACGATCACAAAGTGTCGTTTCTAAATCATTTTTTTTTAAATATTTCCCCGACTGAATAATATATCACTTTTCCTTAAAATCACCCAAAATAAATATTTTATAAATAATTTAAGTCCTCAAGAAATCATAAAAGATCAAAGCAATTGATAAACTGTTTTCCATTTTGAAACATCTTTTCGAAACCACTCAAAACTATGATAAAATGAATCTGACGAATTTTCGACAAAGTCTCCTTTGTGTTTACATCGCATACCAGAGCCTCTGGCTCAGTCAATCTAACACAAATTCACAGACAAAATATTTTCACAACTCAACATTTCAAACATTTAAAATTTTAATTCTAAAAGTGTCCGCAGTCAGTTACATAGAAAGCTCAGACACATTATTTTCAGAAAATCATAATAAATTCATCCGTTGTCGAAACGTCGCGAACCATAGGTCCATTTCGACCATCTCGACGAGGCGAATCCATTGGTCAACCTATTTCACTTTTCAACAGTATTAAAATGACGAAAATACCCCTGAACAGTTCAGTCTTTTCGTCCAGACAATATTTTTCAAAAACTAATCGGTTGAATCAACTCATTTCGTCGTCTAAAGCATAGATATCAAATAAAATTCACATTTCGATACTTTTTCAAAAAGCTAAGATTTTAAAATGATCCGATCGTAAATTTTCTTTTAGATCTACTACCACATAGACTCACTCTACCACATTAATAAAAGAAATGAGCATGAAAATTATAATCCAAAACCATTATCTCTTTATATGTATCACACGGTTTTGAAAAGGAAAGTTTGTTTGCTTTTCTTTCTTTCAACACAACTAAAATTAATGGTAATAGAAACATGATTAACTCATCAAAAGAAGCAAAAGATCAAAATAAATATCATCTCCCAACAAACCCACATACACGGCTGAAATGGAAAAGAAAAAGGAAATCCTTACTTCAAGTTTTATTCCCAAGCAAGCTAATCTTCTAACTCTTGAGCTAAATAACCTTGCACCTTAACTAAGATTAATCACCACGCGAGAGGAAGAAGAGAAATGACGGAAATGGAGTTCCAAGAGGAAGGGGTTCACGTTTTATTTCAAGAGGCAGGAAGATAAAATTTAGTCATGGAACTTGTCTTAAATAGGCCACACAAAATAATCCTAGCCATTTGATCAAATAGTAAGACATGTGGGTTCAATCTTAGCCATTCATTTTTACTACTCACAAACATATTAAACTAATATCCTATCAAAATATCTTAGATATTTTGTCCTCTATGCCACATCATTGGCCTCATGTTTCTAATTTAACGCGTCTAATCTCGGTCATGGATGAATTTCACGGTAAATATAGGTCATTTATTAACAAAAAAATATCAAAACAAATATAAAGCCCTAAATTTAGTTATAGCTAAATTACGGGTCTTACAATAATCATATGTGTCGGTGTCGGACACCGACACCAGGACGCACCTAATCCGAGGAGTGTCCTTGCTTCGTATGTCTTAATTTTCGGTGTGGGTGTGTGAATTGGTGGGTGATTGAGGACTCTAAATACACTCAAGAAAAACGATCAAGAATATTTCTACAGCATCTGGATCTTGGTAATGATGATACATCGAATCATGAATAAAACTATCAATTTAGTCTCTGAATATCACACTATTTCCGGTTTAGTTCCTGAACTATATAAATATGATAAGTAGTTCCTGAAGTATATGAAATGCGTCAATTTAATCTTTGAAGTATACTGAAATTCGTCAATTTTGTCTCTAACATCTTAATTGTTGTGACTAAATTTATGAGTTTCATATACTTTAGAGACTATTTATCATGTTTCTATAGGGTAGGGACTAAATTTGAGATAGGATTTACCCAAAATTTCCCATGTTAGTCATGATGTGTCTGCCATAGTTATACAAATATTACCTTATTTTCAAATCTTTCACATGGCAAACCTATGGGTGTTTTGGAACCCTAAATGTTAAATTTTCCCATTAAGTGCATACCAACACCCTGATTTTTATTGTTTAATGCTACTTCTCTTCTACATCGTAGACATCTCAAGCATCTAGGTTTTCATTTATTGAACTTGTTGAAATTGATATCTAAGTCTTAGATATGATTGAAAAATAGAAATCATGCACTTATGGCAATGAGTAAAAACTAAGGCCCACCACCAGATTTGCTTCCTGAAGTTTTTATGTGTGTAATGAAGAATATTCTTGTAAAAATTTAATGGTATTCTTGTAAAGATTTAATGGTAAATCGTTCAAATAAGTTTGCAGTTCTTATGGCTTTAATGATAAATAATTGATTATGAAGTATGTTTTAATTTGTTATGGTTTATTTATGTGTGCTTTTTATTAGGGATTTCGGAAAGCAGATCCTGATCGTTGGGAGTTTGCCAATGAAAAATTTATAAAAGATCAAAAACATCTTCTGACGGATATACACCGCAAGAAACCTATCCACAGTCATAGTCATCCTCCGGGTTCTGCTGTAGATCCAGAAAGGGCAGCATTGGAGAAAGAAATAGAGAAGCTGTTGCGCGAGAAAAATGCCCTTCAATCCAAACTCCTAAGCTATAATTATCTTGATACAGAAAAGCTTCAGCTGGAAGATTTTCAGCGGCAATTGGATGGCATGGAGAAGAGGCAGACAAATTTGCAAAACTTCTTTGAGAAGGCTCTACAGGATTCTTTTATTGTTGAACTACTTTCCCTCAAAATCAAATCCATGGATTTGGAAACTTATAATAAGAAAAGGCGATTGTCTCAGGTTGATCACATGCAGCCTGTTGCCGAAGGTAGCTTGGTCGACCTTCCTAGCAATGTTTTCTCTCAGAATCTTTCTGAAGGAGAACTGACAGGGATACAGACAAGAACTGACCCCGCTGATCCAAAGGAGGCTTCAGGTAACGTCCAAGTCAAAGCAGCTGCTCGGCACGGAGTGAATGATGTGTTTTGGGAACAATTCCTTACTGAAAGTCCATGCTGTTCAGACAATGAAGAGGCATTGTCCAACTAA
Protein sequence

>MS.gene03509.t1

MNSAPQSSSATAADGSREGMAPFLQKTYDMVDDPTTDEIISWSSDNKSFIVWNPPEFSRVLLPTYFKHSNFSSFIRQLNTYGFRKADPDRWEFANEKFIKDQKHLLTDIHRKKPIHSHSHPPGSAVDPERAALEKEIEKLLREKNALQSKLLSYNYLDTEKLQLEDFQRQLDGMEKRQTNLQNFFEKALQDSFIVELLSLKIKSMDLETYNKKRRLSQVDHMQPVAEGSLVDLPSNVFSQNLSEGELTGIQTRTDPADPKEASGNVQVKAAARHGVNDVFWEQFLTESPCCSDNEEALSN