Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene035157.t1 | XP_024632961.1 | 84.9 | 793 | 92 | 4 | 1 | 765 | 1 | 793 | 0.00E+00 | 1345.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene035157.t1 | Q9SZL8 | 27.2 | 636 | 393 | 11 | 32 | 665 | 70 | 637 | 5.6e-64 | 247.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene035157.t1 | D3YBB9 | 77.0 | 774 | 158 | 4 | 1 | 764 | 49 | 812 | 0.0e+00 | 1195.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene035157.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene035157.t1 | MTR_0558s0020 | 86.824 | 296 | 38 | 1 | 1 | 295 | 1 | 296 | 0.0 | 547 |
MS.gene035157.t1 | MTR_1g083640 | 82.394 | 284 | 34 | 1 | 1 | 268 | 1 | 284 | 1.58e-171 | 494 |
MS.gene035157.t1 | MTR_8g446020 | 73.559 | 295 | 39 | 1 | 1 | 295 | 1 | 256 | 3.17e-152 | 444 |
MS.gene035157.t1 | MTR_6g090505 | 82.700 | 237 | 41 | 0 | 65 | 301 | 1 | 237 | 6.80e-142 | 422 |
MS.gene035157.t1 | MTR_6g090505 | 67.647 | 102 | 6 | 2 | 396 | 495 | 230 | 306 | 3.02e-34 | 135 |
MS.gene035157.t1 | MTR_6g090505 | 77.551 | 49 | 11 | 0 | 567 | 615 | 314 | 362 | 8.83e-12 | 67.8 |
MS.gene035157.t1 | MTR_2g014100 | 81.224 | 245 | 37 | 1 | 1 | 236 | 1 | 245 | 9.28e-141 | 414 |
MS.gene035157.t1 | MTR_0337s0040 | 71.923 | 260 | 33 | 2 | 1 | 259 | 1 | 221 | 8.97e-124 | 370 |
MS.gene035157.t1 | MTR_3g008240 | 83.251 | 203 | 33 | 1 | 1 | 202 | 1 | 203 | 3.38e-117 | 352 |
MS.gene035157.t1 | MTR_4g040430 | 82.673 | 202 | 31 | 1 | 1 | 202 | 1 | 198 | 1.23e-116 | 350 |
MS.gene035157.t1 | MTR_0337s0060 | 59.494 | 316 | 28 | 4 | 447 | 759 | 21 | 239 | 1.62e-110 | 336 |
MS.gene035157.t1 | MTR_5g071590 | 72.778 | 180 | 36 | 2 | 1 | 167 | 1 | 180 | 3.87e-89 | 278 |
MS.gene035157.t1 | MTR_1g055240 | 87.324 | 142 | 18 | 0 | 91 | 232 | 3 | 144 | 1.35e-86 | 270 |
MS.gene035157.t1 | MTR_0019s0290 | 81.579 | 152 | 28 | 0 | 82 | 233 | 9 | 160 | 7.83e-86 | 268 |
MS.gene035157.t1 | MTR_3g028680 | 81.457 | 151 | 25 | 1 | 618 | 765 | 1 | 151 | 9.86e-81 | 256 |
MS.gene035157.t1 | MTR_2g067090 | 78.378 | 148 | 29 | 1 | 621 | 765 | 99 | 246 | 1.31e-71 | 236 |
MS.gene035157.t1 | MTR_4g133495 | 63.536 | 181 | 40 | 2 | 576 | 753 | 88 | 245 | 9.40e-68 | 225 |
MS.gene035157.t1 | MTR_4g133340 | 63.536 | 181 | 40 | 2 | 576 | 753 | 88 | 245 | 9.40e-68 | 225 |
MS.gene035157.t1 | MTR_1281s0010 | 79.817 | 109 | 22 | 0 | 19 | 127 | 1 | 109 | 4.21e-56 | 187 |
MS.gene035157.t1 | MTR_6g051425 | 32.075 | 318 | 185 | 6 | 40 | 341 | 22 | 324 | 1.51e-38 | 147 |
MS.gene035157.t1 | MTR_4g008820 | 69.000 | 100 | 30 | 1 | 1 | 99 | 125 | 224 | 3.12e-31 | 130 |
MS.gene035157.t1 | MTR_8g046060 | 76.136 | 88 | 12 | 2 | 1 | 79 | 91 | 178 | 8.00e-31 | 120 |
MS.gene035157.t1 | MTR_1g070355 | 26.235 | 324 | 218 | 6 | 41 | 362 | 80 | 384 | 3.88e-19 | 92.4 |
MS.gene035157.t1 | MTR_2g067130 | 62.162 | 74 | 22 | 2 | 695 | 765 | 46 | 116 | 2.28e-18 | 83.2 |
MS.gene035157.t1 | MTR_0402s0040 | 25.946 | 185 | 118 | 4 | 49 | 233 | 40 | 205 | 2.09e-14 | 77.0 |
MS.gene035157.t1 | MTR_0337s0050 | 75.000 | 36 | 9 | 0 | 259 | 294 | 14 | 49 | 1.69e-13 | 66.6 |
MS.gene035157.t1 | MTR_4g035820 | 22.069 | 290 | 193 | 7 | 17 | 299 | 61 | 324 | 3.10e-12 | 70.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene035157.t1 | AT4G38180 | 27.769 | 641 | 383 | 13 | 32 | 665 | 70 | 637 | 1.47e-70 | 247 |
MS.gene035157.t1 | AT4G15090 | 24.688 | 721 | 449 | 16 | 50 | 753 | 66 | 709 | 1.95e-60 | 219 |
MS.gene035157.t1 | AT4G15090 | 24.688 | 721 | 449 | 16 | 50 | 753 | 66 | 709 | 1.95e-60 | 219 |
MS.gene035157.t1 | AT4G15090 | 24.688 | 721 | 449 | 16 | 50 | 753 | 66 | 709 | 1.95e-60 | 219 |
MS.gene035157.t1 | AT4G15090 | 24.688 | 721 | 449 | 16 | 50 | 753 | 66 | 709 | 1.95e-60 | 219 |
MS.gene035157.t1 | AT4G15090 | 24.688 | 721 | 449 | 16 | 50 | 753 | 66 | 709 | 1.95e-60 | 219 |
MS.gene035157.t1 | AT2G27110 | 26.466 | 597 | 365 | 15 | 127 | 719 | 108 | 634 | 5.40e-54 | 201 |
MS.gene035157.t1 | AT2G27110 | 26.466 | 597 | 365 | 15 | 127 | 719 | 108 | 634 | 5.40e-54 | 201 |
MS.gene035157.t1 | AT2G27110 | 26.937 | 542 | 325 | 13 | 180 | 719 | 17 | 489 | 3.43e-53 | 196 |
MS.gene035157.t1 | AT3G06250 | 25.118 | 633 | 351 | 16 | 34 | 661 | 189 | 703 | 2.44e-51 | 192 |
MS.gene035157.t1 | AT3G06250 | 25.118 | 633 | 351 | 16 | 34 | 661 | 189 | 703 | 2.44e-51 | 192 |
MS.gene035157.t1 | AT3G06250 | 25.118 | 633 | 351 | 16 | 34 | 661 | 189 | 703 | 2.44e-51 | 192 |
MS.gene035157.t1 | AT1G76320 | 24.963 | 677 | 412 | 19 | 50 | 720 | 12 | 598 | 4.49e-51 | 190 |
MS.gene035157.t1 | AT1G76320 | 24.963 | 677 | 412 | 19 | 50 | 720 | 12 | 598 | 1.53e-50 | 189 |
MS.gene035157.t1 | AT1G76320 | 24.963 | 677 | 412 | 19 | 50 | 720 | 12 | 598 | 1.59e-50 | 189 |
MS.gene035157.t1 | AT1G76320 | 24.963 | 677 | 412 | 19 | 50 | 720 | 12 | 598 | 1.59e-50 | 189 |
MS.gene035157.t1 | AT3G22170 | 23.021 | 682 | 427 | 16 | 34 | 708 | 69 | 659 | 5.86e-49 | 186 |
MS.gene035157.t1 | AT3G22170 | 23.021 | 682 | 427 | 16 | 34 | 708 | 69 | 659 | 5.86e-49 | 186 |
MS.gene035157.t1 | AT5G18960 | 24.575 | 647 | 360 | 18 | 24 | 661 | 200 | 727 | 2.36e-45 | 174 |
MS.gene035157.t1 | AT5G18960 | 24.575 | 647 | 360 | 18 | 24 | 661 | 200 | 727 | 2.36e-45 | 174 |
MS.gene035157.t1 | AT4G38170 | 25.290 | 431 | 264 | 11 | 235 | 662 | 24 | 399 | 5.01e-44 | 167 |
MS.gene035157.t1 | AT1G10240 | 24.719 | 623 | 377 | 19 | 49 | 659 | 62 | 604 | 8.50e-42 | 163 |
MS.gene035157.t1 | AT1G10240 | 24.719 | 623 | 377 | 19 | 49 | 659 | 62 | 604 | 8.50e-42 | 163 |
MS.gene035157.t1 | AT5G28530 | 24.100 | 639 | 388 | 17 | 40 | 660 | 60 | 619 | 2.06e-41 | 162 |
MS.gene035157.t1 | AT5G28530 | 23.944 | 639 | 385 | 18 | 40 | 660 | 60 | 615 | 1.40e-40 | 159 |
MS.gene035157.t1 | AT5G28530 | 23.944 | 639 | 385 | 18 | 40 | 660 | 60 | 615 | 1.40e-40 | 159 |
MS.gene035157.t1 | AT2G32250 | 24.161 | 745 | 428 | 22 | 4 | 743 | 10 | 622 | 1.61e-40 | 160 |
MS.gene035157.t1 | AT2G32250 | 24.161 | 745 | 428 | 22 | 4 | 743 | 10 | 622 | 1.80e-40 | 160 |
MS.gene035157.t1 | AT2G32250 | 24.161 | 745 | 428 | 22 | 4 | 743 | 10 | 622 | 1.80e-40 | 160 |
MS.gene035157.t1 | AT2G32250 | 24.161 | 745 | 428 | 22 | 4 | 743 | 10 | 622 | 2.18e-40 | 160 |
MS.gene035157.t1 | AT2G32250 | 24.161 | 745 | 428 | 22 | 4 | 743 | 10 | 622 | 2.18e-40 | 160 |
MS.gene035157.t1 | AT2G32250 | 24.161 | 745 | 428 | 22 | 4 | 743 | 10 | 622 | 2.18e-40 | 160 |
MS.gene035157.t1 | AT2G32250 | 24.177 | 699 | 396 | 20 | 50 | 743 | 12 | 581 | 1.33e-39 | 157 |
MS.gene035157.t1 | AT2G32250 | 24.177 | 699 | 396 | 20 | 50 | 743 | 12 | 581 | 1.42e-39 | 157 |
MS.gene035157.t1 | AT1G80010 | 24.043 | 653 | 373 | 23 | 41 | 662 | 101 | 661 | 1.78e-37 | 150 |
MS.gene035157.t1 | AT1G52520 | 22.472 | 623 | 407 | 15 | 41 | 662 | 91 | 638 | 2.94e-34 | 140 |
MS.gene035157.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 106 | 369 | 1.49e-27 | 119 |
MS.gene035157.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 438 | 558 | 1.24e-12 | 72.0 |
MS.gene035157.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 1.56e-27 | 119 |
MS.gene035157.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 1.35e-12 | 72.0 |
MS.gene035157.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 177 | 440 | 1.88e-27 | 119 |
MS.gene035157.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 509 | 629 | 1.47e-12 | 71.6 |
MS.gene035157.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 1.89e-27 | 119 |
MS.gene035157.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 1.34e-12 | 72.0 |
MS.gene035157.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 1.89e-27 | 119 |
MS.gene035157.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 1.34e-12 | 72.0 |
MS.gene035157.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 1.93e-27 | 119 |
MS.gene035157.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 1.29e-12 | 72.0 |
MS.gene035157.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 1.93e-27 | 119 |
MS.gene035157.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 1.29e-12 | 72.0 |
MS.gene035157.t1 | AT5G28530 | 21.781 | 629 | 352 | 20 | 40 | 660 | 60 | 556 | 1.95e-22 | 103 |
MS.gene035157.t1 | AT5G28530 | 21.622 | 629 | 349 | 21 | 40 | 660 | 60 | 552 | 1.47e-21 | 100 |
Find 115 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCATGCTGAGTTGGACTTTA+AGG | 0.133287 | 5.2:+37953940 | MS.gene035157:CDS |
TTTCGATGAGTTAACTAATT+TGG | 0.156761 | 5.2:+37953631 | MS.gene035157:CDS |
AGTCGCTTCTTTGACCTAAT+TGG | 0.186128 | 5.2:-37954766 | None:intergenic |
CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 5.2:+37953898 | MS.gene035157:CDS |
CAACAAGATTATGCTCTATT+TGG | 0.198611 | 5.2:+37952847 | MS.gene035157:CDS |
TTCATTTCAGCTGCCTTTCT+TGG | 0.201003 | 5.2:+37953350 | MS.gene035157:intron |
CATCGTAAGAGTGTGTTATT+TGG | 0.276792 | 5.2:+37953383 | MS.gene035157:CDS |
TATGGTTTGAGGTTTCTTAT+TGG | 0.280533 | 5.2:-37953477 | None:intergenic |
TTCTTTGACCTAATTGGATT+TGG | 0.299426 | 5.2:-37954760 | None:intergenic |
CCAAGAACAATTCACAAAAT+AGG | 0.312137 | 5.2:+37952245 | MS.gene035157:CDS |
AATCAGATTTCGACTACAAT+TGG | 0.318540 | 5.2:+37953672 | MS.gene035157:CDS |
TGTTCTTGAGGCAGGGAAAA+AGG | 0.322946 | 5.2:+37954612 | MS.gene035157:CDS |
GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 5.2:-37952897 | None:intergenic |
GGTTTCGAATGTTGATGTTT+TGG | 0.354913 | 5.2:+37954195 | MS.gene035157:CDS |
ACTAGCCTGGTCTGTGTATA+TGG | 0.360230 | 5.2:-37953495 | None:intergenic |
TATGCATTGGTCTTCAGTTT+GGG | 0.370760 | 5.2:+37953772 | MS.gene035157:CDS |
CTCAACGGTGTTCTTGAGGC+AGG | 0.386173 | 5.2:+37954604 | MS.gene035157:CDS |
AACAATAAATATCGGCCATT+AGG | 0.388497 | 5.2:+37952904 | MS.gene035157:CDS |
ACCGAACAAACAATAAATAT+CGG | 0.389395 | 5.2:+37952896 | MS.gene035157:CDS |
GTATGCATTGGTCTTCAGTT+TGG | 0.392120 | 5.2:+37953771 | MS.gene035157:CDS |
GTCTTTAGTGCCAACATTCA+TGG | 0.395146 | 5.2:-37954488 | None:intergenic |
TTCTCATACTCAACAAGAAC+TGG | 0.395633 | 5.2:-37952367 | None:intergenic |
AAGAAAGACCAAATCCAATT+AGG | 0.397771 | 5.2:+37954752 | MS.gene035157:CDS |
TTTGGTCTTTCTTTGAACTT+TGG | 0.398856 | 5.2:-37954742 | None:intergenic |
TTCCTTCAAATACTATTATG+AGG | 0.399583 | 5.2:+37954072 | MS.gene035157:CDS |
GAGGAGTTTCTTATTTCTAA+AGG | 0.403538 | 5.2:+37954637 | MS.gene035157:CDS |
TAAAGAATCATGGAAGTCTT+TGG | 0.408500 | 5.2:+37952138 | MS.gene035157:CDS |
CATGTCGTATGTTTGAGAAC+CGG | 0.411671 | 5.2:+37954320 | MS.gene035157:CDS |
GATTATGATCTTCAAACCTT+GGG | 0.413114 | 5.2:-37954243 | None:intergenic |
ATAACACTGGATTCTCTGTT+AGG | 0.417808 | 5.2:+37952209 | MS.gene035157:CDS |
GGGTTGTCACAGTCGACATT+AGG | 0.419786 | 5.2:+37954278 | MS.gene035157:CDS |
CGATTATGATCTTCAAACCT+TGG | 0.425681 | 5.2:-37954244 | None:intergenic |
CGAGAAGTAAATGAAGTTCA+AGG | 0.430014 | 5.2:+37952544 | MS.gene035157:CDS |
AGCTGGAATATATTTGAAGT+TGG | 0.433136 | 5.2:+37952426 | MS.gene035157:CDS |
ACAAAATAGGAAATCGGATA+AGG | 0.438571 | 5.2:+37952258 | MS.gene035157:CDS |
TGGTCTGTGTATATGGTTTG+AGG | 0.447350 | 5.2:-37953488 | None:intergenic |
GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 5.2:+37952409 | MS.gene035157:CDS |
CGCTTTAAAACATATTGTGC+AGG | 0.447633 | 5.2:-37954421 | None:intergenic |
CGTTATGCTTGTAACAAAGA+AGG | 0.449439 | 5.2:+37952292 | MS.gene035157:CDS |
GCTTTAATAAATTCTAAAGC+TGG | 0.450264 | 5.2:+37952574 | MS.gene035157:CDS |
ATCTGAGAGTGGACAATTGA+CGG | 0.452529 | 5.2:+37952063 | MS.gene035157:CDS |
TGGTCTTTGCTCATGGCACA+TGG | 0.452802 | 5.2:+37953562 | MS.gene035157:CDS |
GGCCTACTTCGGACTTTAAG+TGG | 0.458978 | 5.2:+37953726 | MS.gene035157:CDS |
ATGTCGTATGTTTGAGAACC+GGG | 0.461344 | 5.2:+37954321 | MS.gene035157:CDS |
CTCCTCATAATAGTATTTGA+AGG | 0.485089 | 5.2:-37954074 | None:intergenic |
TTACAACCAACCCTTTCCTC+TGG | 0.485330 | 5.2:-37952403 | None:intergenic |
TTTAATTATGCATATAACAC+TGG | 0.485542 | 5.2:+37952196 | MS.gene035157:CDS |
TCTAATGACAACTCGTCAAA+AGG | 0.488137 | 5.2:+37952687 | MS.gene035157:CDS |
CAATTCACAAAATAGGAAAT+CGG | 0.489099 | 5.2:+37952252 | MS.gene035157:CDS |
CTCAAGTAGCACAAATGCTC+TGG | 0.489977 | 5.2:-37952514 | None:intergenic |
TATGAGGAGGACACAACAAA+AGG | 0.490908 | 5.2:+37954088 | MS.gene035157:CDS |
ATGATTGTCAAAACCAAGAA+AGG | 0.491378 | 5.2:-37953363 | None:intergenic |
CTGTCTATGAACCATCTGTT+GGG | 0.491412 | 5.2:+37954713 | MS.gene035157:CDS |
ATCAGATTTCGACTACAATT+GGG | 0.491708 | 5.2:+37953673 | MS.gene035157:CDS |
CGTCAAAAGGAGATGGTGGC+TGG | 0.492100 | 5.2:+37952700 | MS.gene035157:CDS |
ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 5.2:+37953912 | MS.gene035157:CDS |
GACCGCATAAGCTGACTGTT+GGG | 0.496307 | 5.2:-37953992 | None:intergenic |
GAAGCGATGGGTCAAGGAGT+TGG | 0.502080 | 5.2:+37952619 | MS.gene035157:CDS |
TGTCTTCTGCAGCATCAACT+TGG | 0.502977 | 5.2:-37952792 | None:intergenic |
AAATGCTCTGGTTTATGTAA+TGG | 0.504865 | 5.2:-37952502 | None:intergenic |
CTCATTCAAATCGTATGCAT+TGG | 0.507227 | 5.2:+37953759 | MS.gene035157:CDS |
ATCATAATCGACTTGATGAA+AGG | 0.507955 | 5.2:+37954257 | MS.gene035157:CDS |
TTTAAGTCCGAAAATCGAAA+AGG | 0.508080 | 5.2:-37952658 | None:intergenic |
GAGGGATAATCATGCTGAGT+TGG | 0.508852 | 5.2:+37953931 | MS.gene035157:CDS |
ATTGGTCTTCAGTTTGGGTG+AGG | 0.509410 | 5.2:+37953777 | MS.gene035157:CDS |
TGTCTATAAGATATATAAGT+GGG | 0.514682 | 5.2:+37952462 | MS.gene035157:CDS |
GATCTTCAAACCTTGGGGAA+AGG | 0.519004 | 5.2:-37954237 | None:intergenic |
TAAAGAATCGAACAAGTGAA+TGG | 0.519618 | 5.2:-37953880 | None:intergenic |
TCATAATCGACTTGATGAAA+GGG | 0.526860 | 5.2:+37954258 | MS.gene035157:CDS |
CATAATAGTATTTGAAGGAA+AGG | 0.529686 | 5.2:-37954069 | None:intergenic |
ACTTCAACAACGCACTAGCC+TGG | 0.534735 | 5.2:-37953508 | None:intergenic |
GAGAACATCTTATGAAGCGA+TGG | 0.538371 | 5.2:+37952606 | MS.gene035157:CDS |
TAACAAAGAAGGTTTCAAGA+AGG | 0.538422 | 5.2:+37952303 | MS.gene035157:CDS |
AATCGAACAAGTGAATGGTC+TGG | 0.540971 | 5.2:-37953875 | None:intergenic |
ATGAGGAGGACACAACAAAA+GGG | 0.542065 | 5.2:+37954089 | MS.gene035157:CDS |
AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 5.2:+37952304 | MS.gene035157:CDS |
TCTTATGAAGCGATGGGTCA+AGG | 0.545849 | 5.2:+37952613 | MS.gene035157:CDS |
CATTTAGTGATAAAGAATCA+TGG | 0.546005 | 5.2:+37952128 | MS.gene035157:CDS |
CTGAAATCCACCATGAATGT+TGG | 0.557140 | 5.2:+37954478 | MS.gene035157:CDS |
AATGAAGCTCTCTCGAAACC+AGG | 0.565261 | 5.2:+37952754 | MS.gene035157:CDS |
TGAAAATTCAGTTATTGATG+CGG | 0.565546 | 5.2:+37952087 | MS.gene035157:CDS |
GCTGTCTATGAACCATCTGT+TGG | 0.568181 | 5.2:+37954712 | MS.gene035157:CDS |
TACACGTGTTTGCGCAGATG+CGG | 0.571672 | 5.2:+37954564 | MS.gene035157:CDS |
ATGTCTATAAGATATATAAG+TGG | 0.572287 | 5.2:+37952461 | MS.gene035157:CDS |
GCGATGGGTCAAGGAGTTGG+AGG | 0.575794 | 5.2:+37952622 | MS.gene035157:CDS |
GGACCGCATAAGCTGACTGT+TGG | 0.579264 | 5.2:-37953993 | None:intergenic |
TTTGGTGCAGTCCCAACAGA+TGG | 0.581566 | 5.2:-37954724 | None:intergenic |
TGGTGTATACTTGTTTACTA+CGG | 0.585960 | 5.2:-37954014 | None:intergenic |
ATATTAACTTCATCTGAGAG+TGG | 0.588105 | 5.2:+37952052 | MS.gene035157:CDS |
TCAACGGTGTTCTTGAGGCA+GGG | 0.590097 | 5.2:+37954605 | MS.gene035157:CDS |
ATTTCTCAACGGTGTTCTTG+AGG | 0.591378 | 5.2:+37954600 | MS.gene035157:CDS |
TTGAAGAAAACCTTTCCCCA+AGG | 0.594796 | 5.2:+37954227 | MS.gene035157:CDS |
TGAAGACTTAGAAGGCGTAA+CGG | 0.598405 | 5.2:-37954680 | None:intergenic |
GACAACTCGTCAAAAGGAGA+TGG | 0.599038 | 5.2:+37952693 | MS.gene035157:CDS |
TTGATATCGTTGTGCTTGAG+TGG | 0.601464 | 5.2:-37954512 | None:intergenic |
AACTCGTCAAAAGGAGATGG+TGG | 0.603142 | 5.2:+37952696 | MS.gene035157:CDS |
ACGTGTTTGCGCAGATGCGG+AGG | 0.605934 | 5.2:+37954567 | MS.gene035157:CDS |
ATCCCAACAGTCAGCTTATG+CGG | 0.606153 | 5.2:+37953990 | MS.gene035157:CDS |
CTTCAAATACTATTATGAGG+AGG | 0.607664 | 5.2:+37954075 | MS.gene035157:CDS |
AGAACTGGACTGTCACATGT+TGG | 0.620791 | 5.2:-37952352 | None:intergenic |
AGAACATCTTATGAAGCGAT+GGG | 0.621635 | 5.2:+37952607 | MS.gene035157:CDS |
AGCCACTTAAAGTCCGAAGT+AGG | 0.621799 | 5.2:-37953728 | None:intergenic |
GGGTCAAGGAGTTGGAGGCA+CGG | 0.624321 | 5.2:+37952627 | MS.gene035157:CDS |
ATTATGATCTTCAAACCTTG+GGG | 0.630358 | 5.2:-37954242 | None:intergenic |
GGTCTTTGCTCATGGCACAT+GGG | 0.639768 | 5.2:+37953563 | MS.gene035157:CDS |
TTTAGTGCCAACATTCATGG+TGG | 0.641441 | 5.2:-37954485 | None:intergenic |
CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 5.2:+37953913 | MS.gene035157:CDS |
GATTTCAGCTTATCGACAGA+CGG | 0.644926 | 5.2:-37954463 | None:intergenic |
TGAATAAATGAAAAGCAAGA+TGG | 0.655697 | 5.2:-37954034 | None:intergenic |
GCATCTGAAATATTTCTCAA+CGG | 0.661104 | 5.2:+37954589 | MS.gene035157:CDS |
CATGTCGACATAAGAAACCC+CGG | 0.663279 | 5.2:-37954339 | None:intergenic |
TGTCGTATGTTTGAGAACCG+GGG | 0.673760 | 5.2:+37954322 | MS.gene035157:CDS |
ATGTTGATAATGATAATGAG+AGG | 0.683310 | 5.2:+37954173 | MS.gene035157:CDS |
TCAAACCATATACACAGACC+AGG | 0.683597 | 5.2:+37953490 | MS.gene035157:CDS |
TGTTGATAATGATAATGAGA+GGG | 0.689129 | 5.2:+37954174 | MS.gene035157:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATGTCTATAAGATATATAAG+TGG | + | chr5.2:37952461-37952480 | MS.gene035157:CDS | 20.0% |
!! | TGTCTATAAGATATATAAGT+GGG | + | chr5.2:37952462-37952481 | MS.gene035157:CDS | 20.0% |
!! | TTTAATTATGCATATAACAC+TGG | + | chr5.2:37952196-37952215 | MS.gene035157:CDS | 20.0% |
!!! | AATTTAATGTTCTGGTTTAT+GGG | + | chr5.2:37953079-37953098 | MS.gene035157:intron | 20.0% |
!!! | ATGATGAAAAACTGTTTTAA+TGG | + | chr5.2:37953701-37953720 | MS.gene035157:CDS | 20.0% |
!!! | TGAATGTTTATATTGATTGA+AGG | + | chr5.2:37953051-37953070 | MS.gene035157:intron | 20.0% |
! | AAAACACCTTGAAAAACATT+CGG | - | chr5.2:37953539-37953558 | None:intergenic | 25.0% |
! | ACCGAACAAACAATAAATAT+CGG | + | chr5.2:37952896-37952915 | MS.gene035157:CDS | 25.0% |
! | AGTACAAAATACTAACCTAA+TGG | - | chr5.2:37952922-37952941 | None:intergenic | 25.0% |
! | CAATTCACAAAATAGGAAAT+CGG | + | chr5.2:37952252-37952271 | MS.gene035157:CDS | 25.0% |
! | CATAATAGTATTTGAAGGAA+AGG | - | chr5.2:37954072-37954091 | None:intergenic | 25.0% |
! | CATTTAGTGATAAAGAATCA+TGG | + | chr5.2:37952128-37952147 | MS.gene035157:CDS | 25.0% |
! | CTTTAGTCATTTCAACATTA+TGG | + | chr5.2:37953898-37953917 | MS.gene035157:CDS | 25.0% |
! | TGAAAATTCAGTTATTGATG+CGG | + | chr5.2:37952087-37952106 | MS.gene035157:CDS | 25.0% |
! | TGAAATTTGAATGAATGTTC+TGG | + | chr5.2:37952969-37952988 | MS.gene035157:intron | 25.0% |
! | TGAATAAATGAAAAGCAAGA+TGG | - | chr5.2:37954037-37954056 | None:intergenic | 25.0% |
! | TTCCTTCAAATACTATTATG+AGG | + | chr5.2:37954072-37954091 | MS.gene035157:CDS | 25.0% |
! | TTTCGATGAGTTAACTAATT+TGG | + | chr5.2:37953631-37953650 | MS.gene035157:CDS | 25.0% |
!! | AGGTTTAGAATTTAATGTTC+TGG | + | chr5.2:37953071-37953090 | MS.gene035157:intron | 25.0% |
!! | CAAAGTTTTCACAATTGAAA+AGG | + | chr5.2:37954132-37954151 | MS.gene035157:CDS | 25.0% |
!! | TGTTGTATTTTGTTCTGATT+TGG | + | chr5.2:37953327-37953346 | MS.gene035157:intron | 25.0% |
!!! | ATGTTGATAATGATAATGAG+AGG | + | chr5.2:37954173-37954192 | MS.gene035157:CDS | 25.0% |
!!! | GAATTTAATGTTCTGGTTTA+TGG | + | chr5.2:37953078-37953097 | MS.gene035157:intron | 25.0% |
!!! | GCTTTAATAAATTCTAAAGC+TGG | + | chr5.2:37952574-37952593 | MS.gene035157:CDS | 25.0% |
!!! | TGAAAAACTGTTTTAATGGA+AGG | + | chr5.2:37953705-37953724 | MS.gene035157:CDS | 25.0% |
!!! | TGTTGATAATGATAATGAGA+GGG | + | chr5.2:37954174-37954193 | MS.gene035157:CDS | 25.0% |
AAACACATATGATCTTTCCA+TGG | - | chr5.2:37953142-37953161 | None:intergenic | 30.0% | |
AACAAAGAAGGTTTCAAGAA+GGG | + | chr5.2:37952304-37952323 | MS.gene035157:CDS | 30.0% | |
AACAATAAATATCGGCCATT+AGG | + | chr5.2:37952904-37952923 | MS.gene035157:CDS | 30.0% | |
AAGAAAGACCAAATCCAATT+AGG | + | chr5.2:37954752-37954771 | MS.gene035157:CDS | 30.0% | |
AATCAGATTTCGACTACAAT+TGG | + | chr5.2:37953672-37953691 | MS.gene035157:CDS | 30.0% | |
ACAAAATAGGAAATCGGATA+AGG | + | chr5.2:37952258-37952277 | MS.gene035157:CDS | 30.0% | |
ATATTAACTTCATCTGAGAG+TGG | + | chr5.2:37952052-37952071 | MS.gene035157:CDS | 30.0% | |
ATCAGATTTCGACTACAATT+GGG | + | chr5.2:37953673-37953692 | MS.gene035157:CDS | 30.0% | |
ATGATTGTCAAAACCAAGAA+AGG | - | chr5.2:37953366-37953385 | None:intergenic | 30.0% | |
ATTATGATCTTCAAACCTTG+GGG | - | chr5.2:37954245-37954264 | None:intergenic | 30.0% | |
CAACAAGATTATGCTCTATT+TGG | + | chr5.2:37952847-37952866 | MS.gene035157:CDS | 30.0% | |
CCAAGAACAATTCACAAAAT+AGG | + | chr5.2:37952245-37952264 | MS.gene035157:CDS | 30.0% | |
CTCCTCATAATAGTATTTGA+AGG | - | chr5.2:37954077-37954096 | None:intergenic | 30.0% | |
CTGGTATATGTGTGTTAATT+TGG | + | chr5.2:37953008-37953027 | MS.gene035157:intron | 30.0% | |
CTTCAAATACTATTATGAGG+AGG | + | chr5.2:37954075-37954094 | MS.gene035157:CDS | 30.0% | |
GAGAATGCAAAGAAAAATCT+CGG | + | chr5.2:37953587-37953606 | MS.gene035157:CDS | 30.0% | |
GATTATGATCTTCAAACCTT+GGG | - | chr5.2:37954246-37954265 | None:intergenic | 30.0% | |
GCCGATATTTATTGTTTGTT+CGG | - | chr5.2:37952900-37952919 | None:intergenic | 30.0% | |
TAAAGAAAAACCAGAGGAAA+GGG | + | chr5.2:37952393-37952412 | MS.gene035157:CDS | 30.0% | |
TAAAGAATCATGGAAGTCTT+TGG | + | chr5.2:37952138-37952157 | MS.gene035157:CDS | 30.0% | |
TAAAGAATCGAACAAGTGAA+TGG | - | chr5.2:37953883-37953902 | None:intergenic | 30.0% | |
TAACAAAGAAGGTTTCAAGA+AGG | + | chr5.2:37952303-37952322 | MS.gene035157:CDS | 30.0% | |
TGGATATCATAGTAAAAACC+TGG | - | chr5.2:37952775-37952794 | None:intergenic | 30.0% | |
TGGTGTATACTTGTTTACTA+CGG | - | chr5.2:37954017-37954036 | None:intergenic | 30.0% | |
TTCTTTGACCTAATTGGATT+TGG | - | chr5.2:37954763-37954782 | None:intergenic | 30.0% | |
TTTAAGTCCGAAAATCGAAA+AGG | - | chr5.2:37952661-37952680 | None:intergenic | 30.0% | |
TTTCTATTTACACAGCACAA+TGG | + | chr5.2:37953286-37953305 | MS.gene035157:intron | 30.0% | |
! | AAATGCTCTGGTTTATGTAA+TGG | - | chr5.2:37952505-37952524 | None:intergenic | 30.0% |
! | AGCTGGAATATATTTGAAGT+TGG | + | chr5.2:37952426-37952445 | MS.gene035157:CDS | 30.0% |
! | CCTATTTTGTGAATTGTTCT+TGG | - | chr5.2:37952248-37952267 | None:intergenic | 30.0% |
! | GAATCTTCCTTTTCGATTTT+CGG | + | chr5.2:37952651-37952670 | MS.gene035157:CDS | 30.0% |
! | GCATCTGAAATATTTCTCAA+CGG | + | chr5.2:37954589-37954608 | MS.gene035157:CDS | 30.0% |
! | TATGGTTTGAGGTTTCTTAT+TGG | - | chr5.2:37953480-37953499 | None:intergenic | 30.0% |
! | TCAATTCCGAATGTTTTTCA+AGG | + | chr5.2:37953530-37953549 | MS.gene035157:CDS | 30.0% |
! | TGAGGCTTTAACAATTTAAG+CGG | + | chr5.2:37954861-37954880 | MS.gene035157:intron | 30.0% |
! | TTTGGTCTTTCTTTGAACTT+TGG | - | chr5.2:37954745-37954764 | None:intergenic | 30.0% |
!! | ACATGTTTTCAAGATTTTGG+AGG | + | chr5.2:37954357-37954376 | MS.gene035157:CDS | 30.0% |
!! | ATCATAATCGACTTGATGAA+AGG | + | chr5.2:37954257-37954276 | MS.gene035157:CDS | 30.0% |
!! | ATGTTCTGGTTTAGAATTGA+AGG | + | chr5.2:37952983-37953002 | MS.gene035157:intron | 30.0% |
!! | GAGGAGTTTCTTATTTCTAA+AGG | + | chr5.2:37954637-37954656 | MS.gene035157:CDS | 30.0% |
!! | TCATAATCGACTTGATGAAA+GGG | + | chr5.2:37954258-37954277 | MS.gene035157:CDS | 30.0% |
!! | TCGACATGTTTTCAAGATTT+TGG | + | chr5.2:37954354-37954373 | MS.gene035157:CDS | 30.0% |
!!! | AAGACATAGCCAGTATTTTT+TGG | + | chr5.2:37952809-37952828 | MS.gene035157:CDS | 30.0% |
!!! | AGACATAGCCAGTATTTTTT+GGG | + | chr5.2:37952810-37952829 | MS.gene035157:CDS | 30.0% |
!!! | CTGCACAATATGTTTTAAAG+CGG | + | chr5.2:37954422-37954441 | MS.gene035157:CDS | 30.0% |
!!! | GTTTTTCAAGGTGTTTTTCA+TGG | + | chr5.2:37953542-37953561 | MS.gene035157:CDS | 30.0% |
ACATTATGGTTCAGAGAATG+AGG | + | chr5.2:37953912-37953931 | MS.gene035157:CDS | 35.0% | |
AGAACATCTTATGAAGCGAT+GGG | + | chr5.2:37952607-37952626 | MS.gene035157:CDS | 35.0% | |
ATAACACTGGATTCTCTGTT+AGG | + | chr5.2:37952209-37952228 | MS.gene035157:CDS | 35.0% | |
CATAAATTCCAAGGCAAGAT+AGG | - | chr5.2:37953109-37953128 | None:intergenic | 35.0% | |
CATTATGGTTCAGAGAATGA+GGG | + | chr5.2:37953913-37953932 | MS.gene035157:CDS | 35.0% | |
CGAGAAGTAAATGAAGTTCA+AGG | + | chr5.2:37952544-37952563 | MS.gene035157:CDS | 35.0% | |
CGATTATGATCTTCAAACCT+TGG | - | chr5.2:37954247-37954266 | None:intergenic | 35.0% | |
CGTTATGCTTGTAACAAAGA+AGG | + | chr5.2:37952292-37952311 | MS.gene035157:CDS | 35.0% | |
CTAAAGAAAAACCAGAGGAA+AGG | + | chr5.2:37952392-37952411 | MS.gene035157:CDS | 35.0% | |
CTCATTCAAATCGTATGCAT+TGG | + | chr5.2:37953759-37953778 | MS.gene035157:CDS | 35.0% | |
GAAAGCTAAAGAAAAACCAG+AGG | + | chr5.2:37952387-37952406 | MS.gene035157:CDS | 35.0% | |
GAAGCAAAAGAAAGATGATG+AGG | + | chr5.2:37954843-37954862 | MS.gene035157:intron | 35.0% | |
GACAGAAATTCCTTATAGCT+CGG | + | chr5.2:37954818-37954837 | MS.gene035157:intron | 35.0% | |
GTCTGCTTAATCCTAAAAAC+AGG | + | chr5.2:37952329-37952348 | MS.gene035157:CDS | 35.0% | |
TCTAATGACAACTCGTCAAA+AGG | + | chr5.2:37952687-37952706 | MS.gene035157:CDS | 35.0% | |
TGTACAGAGCATAAATTCCA+AGG | - | chr5.2:37953118-37953137 | None:intergenic | 35.0% | |
TTCTCATACTCAACAAGAAC+TGG | - | chr5.2:37952370-37952389 | None:intergenic | 35.0% | |
! | CATCGTAAGAGTGTGTTATT+TGG | + | chr5.2:37953383-37953402 | MS.gene035157:CDS | 35.0% |
! | GAGGCTTTAACAATTTAAGC+GGG | + | chr5.2:37954862-37954881 | MS.gene035157:intron | 35.0% |
! | GGTTTCGAATGTTGATGTTT+TGG | + | chr5.2:37954195-37954214 | MS.gene035157:CDS | 35.0% |
! | TCTTTCAATGCTTTTCTTCG+TGG | + | chr5.2:37953842-37953861 | MS.gene035157:CDS | 35.0% |
! | TGGTTTAGAATTGAAGGTTC+TGG | + | chr5.2:37952989-37953008 | MS.gene035157:intron | 35.0% |
! | TTTTAATGGAAGGCCTACTT+CGG | + | chr5.2:37953715-37953734 | MS.gene035157:CDS | 35.0% |
! | TTTTTCATGGTCTTTGCTCA+TGG | + | chr5.2:37953555-37953574 | MS.gene035157:CDS | 35.0% |
!! | ACTGCTTTTGAAGACTTAGA+AGG | - | chr5.2:37954691-37954710 | None:intergenic | 35.0% |
!! | CGCTTTAAAACATATTGTGC+AGG | - | chr5.2:37954424-37954443 | None:intergenic | 35.0% |
!! | TATGCATTGGTCTTCAGTTT+GGG | + | chr5.2:37953772-37953791 | MS.gene035157:CDS | 35.0% |
!! | TTCAAGATTTTGGAGGTCTT+AGG | + | chr5.2:37954364-37954383 | MS.gene035157:CDS | 35.0% |
!!! | AGACATCAGCTACTTTTGAT+TGG | + | chr5.2:37953426-37953445 | MS.gene035157:CDS | 35.0% |
!!! | CACAATATGTTTTAAAGCGG+TGG | + | chr5.2:37954425-37954444 | MS.gene035157:CDS | 35.0% |
AATCGAACAAGTGAATGGTC+TGG | - | chr5.2:37953878-37953897 | None:intergenic | 40.0% | |
ACCTATGATCTTTGCATAGC+TGG | - | chr5.2:37953236-37953255 | None:intergenic | 40.0% | |
AGTCGCTTCTTTGACCTAAT+TGG | - | chr5.2:37954769-37954788 | None:intergenic | 40.0% | |
ATCTGAGAGTGGACAATTGA+CGG | + | chr5.2:37952063-37952082 | MS.gene035157:CDS | 40.0% | |
ATGAGGAGGACACAACAAAA+GGG | + | chr5.2:37954089-37954108 | MS.gene035157:CDS | 40.0% | |
ATGTCGTATGTTTGAGAACC+GGG | + | chr5.2:37954321-37954340 | MS.gene035157:CDS | 40.0% | |
ATTTATGCTCTGTACAGCCA+TGG | + | chr5.2:37953122-37953141 | MS.gene035157:intron | 40.0% | |
ATTTCTCAACGGTGTTCTTG+AGG | + | chr5.2:37954600-37954619 | MS.gene035157:CDS | 40.0% | |
CATGTCGTATGTTTGAGAAC+CGG | + | chr5.2:37954320-37954339 | MS.gene035157:CDS | 40.0% | |
CTGAAATCCACCATGAATGT+TGG | + | chr5.2:37954478-37954497 | MS.gene035157:CDS | 40.0% | |
CTGTCTATGAACCATCTGTT+GGG | + | chr5.2:37954713-37954732 | MS.gene035157:CDS | 40.0% | |
GAGAACATCTTATGAAGCGA+TGG | + | chr5.2:37952606-37952625 | MS.gene035157:CDS | 40.0% | |
GATTTCAGCTTATCGACAGA+CGG | - | chr5.2:37954466-37954485 | None:intergenic | 40.0% | |
GTCTTTAGTGCCAACATTCA+TGG | - | chr5.2:37954491-37954510 | None:intergenic | 40.0% | |
TATGAGGAGGACACAACAAA+AGG | + | chr5.2:37954088-37954107 | MS.gene035157:CDS | 40.0% | |
TCAAACCATATACACAGACC+AGG | + | chr5.2:37953490-37953509 | MS.gene035157:CDS | 40.0% | |
TCCAGCTATGCAAAGATCAT+AGG | + | chr5.2:37953232-37953251 | MS.gene035157:intron | 40.0% | |
TCCATCTGCCCAAAAAATAC+TGG | - | chr5.2:37952821-37952840 | None:intergenic | 40.0% | |
TGGTCTGTGTATATGGTTTG+AGG | - | chr5.2:37953491-37953510 | None:intergenic | 40.0% | |
TTCATTTCAGCTGCCTTTCT+TGG | + | chr5.2:37953350-37953369 | MS.gene035157:intron | 40.0% | |
TTGAAGAAAACCTTTCCCCA+AGG | + | chr5.2:37954227-37954246 | MS.gene035157:CDS | 40.0% | |
TTGATATCGTTGTGCTTGAG+TGG | - | chr5.2:37954515-37954534 | None:intergenic | 40.0% | |
TTTAGTGCCAACATTCATGG+TGG | - | chr5.2:37954488-37954507 | None:intergenic | 40.0% | |
TTTGCTTCTTCCGAGCTATA+AGG | - | chr5.2:37954831-37954850 | None:intergenic | 40.0% | |
! | TCATGCTGAGTTGGACTTTA+AGG | + | chr5.2:37953940-37953959 | MS.gene035157:CDS | 40.0% |
! | TGAAGACTTAGAAGGCGTAA+CGG | - | chr5.2:37954683-37954702 | None:intergenic | 40.0% |
!! | AAGATTTTGGAGGTCTTAGG+TGG | + | chr5.2:37954367-37954386 | MS.gene035157:CDS | 40.0% |
!! | GTATGCATTGGTCTTCAGTT+TGG | + | chr5.2:37953771-37953790 | MS.gene035157:CDS | 40.0% |
!! | TCACATGTTGGCCTGTTTTT+AGG | - | chr5.2:37952343-37952362 | None:intergenic | 40.0% |
AACTCGTCAAAAGGAGATGG+TGG | + | chr5.2:37952696-37952715 | MS.gene035157:CDS | 45.0% | |
AATGAAGCTCTCTCGAAACC+AGG | + | chr5.2:37952754-37952773 | MS.gene035157:CDS | 45.0% | |
AGAACTGGACTGTCACATGT+TGG | - | chr5.2:37952355-37952374 | None:intergenic | 45.0% | |
AGCCACTTAAAGTCCGAAGT+AGG | - | chr5.2:37953731-37953750 | None:intergenic | 45.0% | |
ATCCCAACAGTCAGCTTATG+CGG | + | chr5.2:37953990-37954009 | MS.gene035157:CDS | 45.0% | |
CATGTCGACATAAGAAACCC+CGG | - | chr5.2:37954342-37954361 | None:intergenic | 45.0% | |
CTCAAGTAGCACAAATGCTC+TGG | - | chr5.2:37952517-37952536 | None:intergenic | 45.0% | |
GAAAAACCAGAGGAAAGGGT+TGG | + | chr5.2:37952397-37952416 | MS.gene035157:CDS | 45.0% | |
GACAACTCGTCAAAAGGAGA+TGG | + | chr5.2:37952693-37952712 | MS.gene035157:CDS | 45.0% | |
GAGGGATAATCATGCTGAGT+TGG | + | chr5.2:37953931-37953950 | MS.gene035157:CDS | 45.0% | |
GATCTTCAAACCTTGGGGAA+AGG | - | chr5.2:37954240-37954259 | None:intergenic | 45.0% | |
GCTGTCTATGAACCATCTGT+TGG | + | chr5.2:37954712-37954731 | MS.gene035157:CDS | 45.0% | |
TCTTATGAAGCGATGGGTCA+AGG | + | chr5.2:37952613-37952632 | MS.gene035157:CDS | 45.0% | |
TGTCGTATGTTTGAGAACCG+GGG | + | chr5.2:37954322-37954341 | MS.gene035157:CDS | 45.0% | |
TGTCTTCTGCAGCATCAACT+TGG | - | chr5.2:37952795-37952814 | None:intergenic | 45.0% | |
TGTTCTTGAGGCAGGGAAAA+AGG | + | chr5.2:37954612-37954631 | MS.gene035157:CDS | 45.0% | |
TTACAACCAACCCTTTCCTC+TGG | - | chr5.2:37952406-37952425 | None:intergenic | 45.0% | |
! | ACTAGCCTGGTCTGTGTATA+TGG | - | chr5.2:37953498-37953517 | None:intergenic | 45.0% |
! | GTGAGGTCACATTTTACAGC+TGG | + | chr5.2:37953794-37953813 | MS.gene035157:CDS | 45.0% |
!! | ATTGGTCTTCAGTTTGGGTG+AGG | + | chr5.2:37953777-37953796 | MS.gene035157:CDS | 45.0% |
!! | GAAAGGGTTGGTTGTAAAGC+TGG | + | chr5.2:37952409-37952428 | MS.gene035157:CDS | 45.0% |
!!! | GCCAGTATTTTTTGGGCAGA+TGG | + | chr5.2:37952817-37952836 | MS.gene035157:CDS | 45.0% |
ACTTCAACAACGCACTAGCC+TGG | - | chr5.2:37953511-37953530 | None:intergenic | 50.0% | |
GACCGCATAAGCTGACTGTT+GGG | - | chr5.2:37953995-37954014 | None:intergenic | 50.0% | |
GGCCTACTTCGGACTTTAAG+TGG | + | chr5.2:37953726-37953745 | MS.gene035157:CDS | 50.0% | |
GGGTTGTCACAGTCGACATT+AGG | + | chr5.2:37954278-37954297 | MS.gene035157:CDS | 50.0% | |
GGTCTTTGCTCATGGCACAT+GGG | + | chr5.2:37953563-37953582 | MS.gene035157:CDS | 50.0% | |
TACACGTGTTTGCGCAGATG+CGG | + | chr5.2:37954564-37954583 | MS.gene035157:CDS | 50.0% | |
TCAACGGTGTTCTTGAGGCA+GGG | + | chr5.2:37954605-37954624 | MS.gene035157:CDS | 50.0% | |
TGGGTGATCCTATCTTGCCT+TGG | + | chr5.2:37953098-37953117 | MS.gene035157:intron | 50.0% | |
TGGTCTTTGCTCATGGCACA+TGG | + | chr5.2:37953562-37953581 | MS.gene035157:CDS | 50.0% | |
! | TTTGGTGCAGTCCCAACAGA+TGG | - | chr5.2:37954727-37954746 | None:intergenic | 50.0% |
CTCAACGGTGTTCTTGAGGC+AGG | + | chr5.2:37954604-37954623 | MS.gene035157:CDS | 55.0% | |
GAAGCGATGGGTCAAGGAGT+TGG | + | chr5.2:37952619-37952638 | MS.gene035157:CDS | 55.0% | |
GGACCGCATAAGCTGACTGT+TGG | - | chr5.2:37953996-37954015 | None:intergenic | 55.0% | |
TGAGGCAGGGAAAAAGGCAG+AGG | + | chr5.2:37954618-37954637 | MS.gene035157:CDS | 55.0% | |
! | CGTCAAAAGGAGATGGTGGC+TGG | + | chr5.2:37952700-37952719 | MS.gene035157:CDS | 55.0% |
ACGTGTTTGCGCAGATGCGG+AGG | + | chr5.2:37954567-37954586 | MS.gene035157:CDS | 60.0% | |
GCGATGGGTCAAGGAGTTGG+AGG | + | chr5.2:37952622-37952641 | MS.gene035157:CDS | 60.0% | |
GGGTCAAGGAGTTGGAGGCA+CGG | + | chr5.2:37952627-37952646 | MS.gene035157:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.2 | gene | 37952043 | 37954890 | 37952043 | ID=MS.gene035157 |
chr5.2 | mRNA | 37952043 | 37954890 | 37952043 | ID=MS.gene035157.t1;Parent=MS.gene035157 |
chr5.2 | exon | 37952043 | 37952925 | 37952043 | ID=MS.gene035157.t1.exon1;Parent=MS.gene035157.t1 |
chr5.2 | CDS | 37952043 | 37952925 | 37952043 | ID=cds.MS.gene035157.t1;Parent=MS.gene035157.t1 |
chr5.2 | exon | 37953360 | 37954773 | 37953360 | ID=MS.gene035157.t1.exon2;Parent=MS.gene035157.t1 |
chr5.2 | CDS | 37953360 | 37954773 | 37953360 | ID=cds.MS.gene035157.t1;Parent=MS.gene035157.t1 |
chr5.2 | exon | 37954881 | 37954890 | 37954881 | ID=MS.gene035157.t1.exon3;Parent=MS.gene035157.t1 |
chr5.2 | CDS | 37954881 | 37954890 | 37954881 | ID=cds.MS.gene035157.t1;Parent=MS.gene035157.t1 |
Gene Sequence |
Protein sequence |