AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene035191

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene035191.t1 MTR_7g098250 98.773 489 6 0 1 489 1 489 0.0 996
MS.gene035191.t1 MTR_1g080330 44.656 421 177 11 72 489 21 388 1.96e-96 296
MS.gene035191.t1 MTR_7g115530 47.439 371 161 10 72 437 49 390 1.60e-90 283
MS.gene035191.t1 MTR_1g080330 48.495 299 116 7 72 369 21 282 1.70e-79 249
MS.gene035191.t1 MTR_7g115530 47.682 302 129 7 72 369 49 325 1.74e-75 240
MS.gene035191.t1 MTR_7g115530 44.964 278 124 7 72 345 49 301 2.16e-61 203
MS.gene035191.t1 MTR_7g093030 53.125 160 74 1 257 416 207 365 1.20e-55 191
MS.gene035191.t1 MTR_7g115530 42.391 276 130 6 72 343 49 299 5.77e-55 188
MS.gene035191.t1 MTR_1g053835 59.441 143 56 2 252 394 248 388 1.50e-54 189
MS.gene035191.t1 MTR_2g027860 64.493 138 46 2 262 396 49 186 1.14e-51 178
MS.gene035191.t1 MTR_7g088070 56.129 155 63 2 241 395 33 182 4.67e-51 175
MS.gene035191.t1 MTR_7g088070 54.717 159 63 3 241 395 33 186 1.65e-49 171
MS.gene035191.t1 MTR_7g115530 41.434 251 118 7 72 318 49 274 5.15e-45 159
MS.gene035191.t1 MTR_6g032990 52.667 150 53 3 258 390 38 186 2.67e-44 160
MS.gene035191.t1 MTR_7g115530 40.945 254 120 8 72 321 49 276 1.48e-43 155
MS.gene035191.t1 MTR_2g086450 48.765 162 63 3 249 390 32 193 4.91e-40 149
MS.gene035191.t1 MTR_5g027440 50.355 141 58 2 262 390 25 165 4.31e-37 138
MS.gene035191.t1 MTR_5g041350 43.537 147 67 2 258 390 11 155 1.20e-36 139
MS.gene035191.t1 MTR_4g081710 46.575 146 63 3 258 390 13 156 6.56e-36 136
MS.gene035191.t1 MTR_2g027800 45.890 146 76 2 258 403 35 177 1.84e-34 131
MS.gene035191.t1 MTR_1g053800 44.966 149 76 2 248 391 158 305 3.36e-34 131
MS.gene035191.t1 MTR_6g444980 48.529 136 59 3 262 390 35 166 5.88e-34 132
MS.gene035191.t1 MTR_7g068600 50.355 141 55 4 253 384 4 138 1.96e-33 127
MS.gene035191.t1 MTR_2g027800 41.615 161 75 3 258 403 35 191 4.34e-33 128
MS.gene035191.t1 MTR_6g444980 47.692 130 59 2 262 385 35 161 7.67e-33 128
MS.gene035191.t1 MTR_1g090670 33.466 251 139 8 246 479 28 267 3.60e-31 122
MS.gene035191.t1 MTR_7g093030 57.303 89 37 1 257 345 207 294 1.08e-30 120
MS.gene035191.t1 MTR_1g053830 52.500 80 38 0 252 331 8 87 5.72e-26 102
MS.gene035191.t1 MTR_7g093010 38.509 161 91 3 229 387 185 339 8.92e-25 105
MS.gene035191.t1 MTR_1g087470 73.333 60 16 0 364 423 78 137 4.54e-21 89.7
MS.gene035191.t1 MTR_2g023580 58.824 68 28 0 251 318 44 111 6.04e-20 89.4
MS.gene035191.t1 MTR_0223s0040 67.857 56 18 0 263 318 19 74 1.66e-19 89.0
MS.gene035191.t1 MTR_1g112370 66.071 56 19 0 263 318 23 78 3.24e-19 89.0
MS.gene035191.t1 MTR_2g084230 67.857 56 18 0 263 318 98 153 8.21e-19 87.4
MS.gene035191.t1 MTR_7g069660 64.286 56 20 0 263 318 72 127 1.02e-18 87.8
MS.gene035191.t1 MTR_2g084230 67.857 56 18 0 263 318 98 153 1.09e-18 88.2
MS.gene035191.t1 MTR_8g086410 66.071 56 19 0 263 318 112 167 1.38e-18 88.2
MS.gene035191.t1 MTR_1g021520 62.121 66 25 0 263 328 127 192 1.38e-18 86.7
MS.gene035191.t1 MTR_8g086410 66.071 56 19 0 263 318 110 165 1.44e-18 88.2
MS.gene035191.t1 MTR_8g066310 54.430 79 34 1 250 326 161 239 1.49e-18 87.4
MS.gene035191.t1 MTR_2g016220 67.857 56 18 0 263 318 90 145 2.09e-18 87.4
MS.gene035191.t1 MTR_2g016220 67.857 56 18 0 263 318 90 145 2.27e-18 87.0
MS.gene035191.t1 MTR_5g019390 88.372 43 5 0 369 411 16 58 2.95e-18 79.3
MS.gene035191.t1 MTR_3g450310 56.140 57 25 0 262 318 19 75 3.05e-18 83.6
MS.gene035191.t1 MTR_8g086410 56.757 74 29 2 263 334 112 184 7.08e-18 86.3
MS.gene035191.t1 MTR_6g071625 67.857 56 18 0 263 318 203 258 7.39e-18 85.5
MS.gene035191.t1 MTR_3g064840 59.420 69 26 1 263 329 275 343 1.48e-17 85.5
MS.gene035191.t1 MTR_5g029470 61.905 63 24 0 256 318 213 275 2.20e-17 84.3
MS.gene035191.t1 MTR_2g016220 58.209 67 27 1 263 329 90 155 5.07e-17 83.2
MS.gene035191.t1 MTR_4g113140 52.778 72 34 0 253 324 226 297 1.27e-14 76.3
MS.gene035191.t1 MTR_1g090670 31.034 203 112 8 294 479 1 192 1.78e-14 73.2
MS.gene035191.t1 MTR_2g450070 58.621 58 23 1 258 315 209 265 4.71e-14 75.1
MS.gene035191.t1 MTR_2g450070 58.621 58 23 1 258 315 209 265 5.04e-14 75.1
MS.gene035191.t1 MTR_4g021790 50.000 70 34 1 262 331 168 236 7.37e-14 72.4
MS.gene035191.t1 MTR_4g086835 53.846 65 30 0 262 326 274 338 2.10e-13 72.4
MS.gene035191.t1 MTR_5g054300 48.718 78 40 0 238 315 174 251 3.07e-13 71.6
MS.gene035191.t1 MTR_4g021855 40.594 101 51 3 253 345 159 258 5.62e-13 70.1
MS.gene035191.t1 MTR_1g093080 52.381 63 30 0 262 324 211 273 7.34e-13 70.5
MS.gene035191.t1 MTR_4g121020 44.444 99 40 4 258 345 107 201 7.92e-13 71.2
MS.gene035191.t1 MTR_4g121020 44.444 99 40 4 258 345 211 305 9.86e-13 70.9
MS.gene035191.t1 MTR_4g121020 44.444 99 40 4 258 345 211 305 1.08e-12 70.9
MS.gene035191.t1 MTR_1g032570 53.968 63 28 1 258 320 127 188 1.15e-12 70.5
MS.gene035191.t1 MTR_1g032570 53.968 63 28 1 258 320 196 257 1.30e-12 70.5
MS.gene035191.t1 MTR_4g021760 44.565 92 48 3 253 342 160 250 1.56e-12 68.9
MS.gene035191.t1 MTR_3g106220 53.968 63 28 1 258 320 194 255 3.08e-12 69.3
MS.gene035191.t1 MTR_1g013170 51.471 68 32 1 258 325 187 253 3.14e-12 68.9
MS.gene035191.t1 MTR_5g017980 52.239 67 31 1 259 324 190 256 3.65e-12 67.8
MS.gene035191.t1 MTR_4g086835 53.846 65 29 1 262 326 274 337 3.70e-12 68.6
MS.gene035191.t1 MTR_4g064730 39.080 87 52 1 229 315 98 183 3.94e-12 67.4
MS.gene035191.t1 MTR_4g131580 46.835 79 40 2 258 336 196 272 8.07e-12 68.2
MS.gene035191.t1 MTR_4g131600 45.570 79 41 2 258 336 197 273 8.26e-12 67.8
MS.gene035191.t1 MTR_4g131570 51.562 64 30 1 258 321 199 261 9.00e-12 67.8
MS.gene035191.t1 MTR_7g089010 55.556 54 23 1 262 315 91 143 1.18e-11 65.9
MS.gene035191.t1 MTR_4g098870 59.259 54 21 1 262 315 310 362 1.21e-11 67.4
MS.gene035191.t1 MTR_4g098870 59.259 54 21 1 262 315 330 382 1.24e-11 67.4
MS.gene035191.t1 MTR_4g098870 59.259 54 21 1 262 315 310 362 1.33e-11 67.0
MS.gene035191.t1 MTR_4g098870 59.259 54 21 1 262 315 349 401 1.38e-11 67.4
MS.gene035191.t1 MTR_4g098870 59.259 54 21 1 262 315 330 382 1.42e-11 67.0
MS.gene035191.t1 MTR_5g014040 36.522 115 58 3 214 315 251 363 1.76e-11 66.6
MS.gene035191.t1 MTR_5g017980 52.239 67 30 2 259 324 189 254 6.59e-11 63.9
MS.gene035191.t1 MTR_5g017980 52.239 67 30 2 259 324 190 255 6.70e-11 63.9
MS.gene035191.t1 MTR_5g014040 34.167 120 64 3 214 320 251 368 7.82e-11 64.7
MS.gene035191.t1 MTR_5g014040 34.167 120 64 3 214 320 211 328 9.29e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene035191.t1 AT4G28610 47.661 449 166 18 1 440 1 389 1.68e-109 331
MS.gene035191.t1 AT5G29000 46.851 397 174 10 18 404 5 374 4.93e-95 294
MS.gene035191.t1 AT5G29000 50.000 348 138 9 67 404 10 331 3.96e-93 288
MS.gene035191.t1 AT5G29000 50.000 348 138 9 67 404 10 331 3.96e-93 288
MS.gene035191.t1 AT3G04450 49.851 335 144 11 67 393 14 332 5.83e-84 265
MS.gene035191.t1 AT3G04450 49.851 335 144 11 67 393 14 332 5.83e-84 265
MS.gene035191.t1 AT3G04450 49.851 335 144 11 67 393 54 372 2.09e-83 265
MS.gene035191.t1 AT2G20400 48.289 263 114 6 139 391 110 360 9.44e-61 204
MS.gene035191.t1 AT2G20400 48.106 264 114 7 139 391 110 361 5.62e-59 199
MS.gene035191.t1 AT5G29000 40.625 320 158 8 18 330 5 299 5.74e-55 186
MS.gene035191.t1 AT5G06800 56.173 162 70 1 232 393 162 322 4.21e-54 186
MS.gene035191.t1 AT2G01060 64.085 142 49 2 257 396 10 151 6.61e-53 180
MS.gene035191.t1 AT5G06800 54.491 167 70 2 232 393 162 327 6.59e-52 181
MS.gene035191.t1 AT3G13040 54.348 184 72 4 251 429 233 409 1.67e-49 176
MS.gene035191.t1 AT3G13040 54.348 184 72 4 251 429 233 409 1.67e-49 176
MS.gene035191.t1 AT3G13040 54.348 184 72 4 251 429 233 409 1.67e-49 176
MS.gene035191.t1 AT3G04450 42.182 275 134 11 67 332 54 312 2.24e-46 164
MS.gene035191.t1 AT3G24120 54.483 145 54 3 262 394 41 185 9.50e-45 159
MS.gene035191.t1 AT4G13640 53.793 145 55 2 262 394 37 181 6.51e-44 157
MS.gene035191.t1 AT3G24120 53.378 148 54 4 262 394 41 188 1.17e-42 153
MS.gene035191.t1 AT4G13640 52.703 148 55 3 262 394 37 184 7.46e-42 151
MS.gene035191.t1 AT3G04030 50.676 148 58 2 258 390 41 188 6.73e-41 151
MS.gene035191.t1 AT5G18240 44.000 200 83 5 240 415 26 220 3.20e-40 149
MS.gene035191.t1 AT5G18240 44.000 200 83 5 240 415 26 220 3.20e-40 149
MS.gene035191.t1 AT1G69580 47.799 159 62 3 251 390 23 179 5.32e-39 145
MS.gene035191.t1 AT1G69580 46.875 160 63 3 251 390 23 180 1.52e-38 143
MS.gene035191.t1 AT3G04030 50.000 148 58 3 258 390 41 187 2.25e-38 144
MS.gene035191.t1 AT1G79430 46.763 139 65 2 262 394 34 169 1.33e-37 141
MS.gene035191.t1 AT5G18240 43.500 200 82 6 240 415 26 218 3.35e-37 141
MS.gene035191.t1 AT3G04030 47.973 148 56 3 258 390 41 182 2.61e-35 136
MS.gene035191.t1 AT5G18240 42.000 200 81 6 240 415 26 214 1.43e-34 134
MS.gene035191.t1 AT5G18240 42.000 200 81 6 240 415 26 214 1.43e-34 134
MS.gene035191.t1 AT2G01060 63.725 102 35 2 297 396 1 102 7.42e-33 125
MS.gene035191.t1 AT5G45580 43.709 151 67 4 262 394 7 157 2.80e-32 124
MS.gene035191.t1 AT5G45580 43.709 151 67 4 262 394 23 173 4.19e-32 124
MS.gene035191.t1 AT3G12730 42.553 141 73 2 262 394 23 163 1.43e-30 119
MS.gene035191.t1 AT5G06800 53.125 96 45 0 232 327 162 257 1.78e-26 108
MS.gene035191.t1 AT3G04030 45.536 112 46 2 294 390 1 112 1.41e-20 92.8
MS.gene035191.t1 AT2G42660 59.091 66 27 0 263 328 51 116 1.71e-20 91.3
MS.gene035191.t1 AT1G79430 41.121 107 54 3 294 394 1 104 2.40e-20 91.7
MS.gene035191.t1 AT1G14600 69.643 56 17 0 263 318 24 79 7.87e-20 89.4
MS.gene035191.t1 AT5G42630 45.455 110 47 2 227 329 69 172 3.25e-19 87.0
MS.gene035191.t1 AT2G02060 71.698 53 15 0 263 315 30 82 3.96e-19 87.4
MS.gene035191.t1 AT2G02060 71.698 53 15 0 263 315 30 82 3.96e-19 87.4
MS.gene035191.t1 AT5G42630 45.455 110 47 2 227 329 69 172 6.19e-19 87.4
MS.gene035191.t1 AT4G04605 56.522 69 30 0 263 331 15 83 9.17e-19 85.5
MS.gene035191.t1 AT4G17695 55.844 77 32 1 252 326 154 230 1.12e-18 87.4
MS.gene035191.t1 AT2G40260 66.071 56 19 0 263 318 83 138 2.03e-18 87.8
MS.gene035191.t1 AT1G32240 43.925 107 54 1 223 329 180 280 2.29e-18 87.0
MS.gene035191.t1 AT5G16560 60.274 73 26 2 263 332 220 292 3.11e-18 87.0
MS.gene035191.t1 AT1G32240 43.925 107 54 1 223 329 180 280 3.11e-18 87.0
MS.gene035191.t1 AT2G38300 54.286 70 32 0 263 332 55 124 3.91e-18 85.9
MS.gene035191.t1 AT2G06020 54.386 57 26 0 262 318 86 142 1.39e-15 77.8
MS.gene035191.t1 AT3G04030 41.964 112 44 3 294 390 1 106 2.11e-15 77.4
MS.gene035191.t1 AT2G03500 52.778 72 34 0 253 324 224 295 5.69e-15 77.4
MS.gene035191.t1 AT4G04580 52.308 65 30 1 263 327 15 78 1.63e-14 72.0
MS.gene035191.t1 AT5G18240 36.986 146 60 5 294 415 1 138 1.75e-14 74.7
MS.gene035191.t1 AT1G25550 60.000 60 24 0 262 321 209 268 3.38e-14 74.3
MS.gene035191.t1 AT4G37180 55.385 65 28 1 252 315 199 263 3.23e-13 71.2
MS.gene035191.t1 AT4G37180 55.385 65 28 1 252 315 206 270 3.60e-13 71.2
MS.gene035191.t1 AT3G12730 34.862 109 63 2 294 394 1 109 4.26e-13 68.2
MS.gene035191.t1 AT1G68670 55.556 63 28 0 262 324 215 277 4.30e-13 70.9
MS.gene035191.t1 AT3G62670 56.452 62 23 1 258 315 207 268 4.87e-13 71.2
MS.gene035191.t1 AT5G59570 47.692 65 33 1 251 315 130 193 5.87e-13 70.1
MS.gene035191.t1 AT5G59570 47.692 65 33 1 251 315 130 193 5.87e-13 70.1
MS.gene035191.t1 AT3G16857 59.322 59 23 1 262 320 167 224 6.87e-13 71.6
MS.gene035191.t1 AT3G16857 59.322 59 23 1 262 320 237 294 8.22e-13 71.2
MS.gene035191.t1 AT3G16857 59.322 59 23 1 262 320 237 294 8.57e-13 71.2
MS.gene035191.t1 AT5G44190 50.769 65 31 1 254 318 139 202 1.22e-12 69.7
MS.gene035191.t1 AT5G44190 50.769 65 31 1 254 318 139 202 1.40e-12 69.3
MS.gene035191.t1 AT2G40970 45.455 77 37 2 244 320 91 162 1.96e-12 67.8
MS.gene035191.t1 AT1G49560 49.315 73 37 0 252 324 182 254 2.07e-12 68.6
MS.gene035191.t1 AT5G05090 55.556 54 23 1 262 315 81 133 3.33e-12 67.4
MS.gene035191.t1 AT4G04555 51.786 56 27 0 263 318 15 70 3.42e-12 63.5
MS.gene035191.t1 AT3G10760 55.556 54 23 1 262 315 105 157 3.60e-12 68.2
MS.gene035191.t1 AT3G46640 55.556 54 23 1 262 315 144 196 4.52e-12 67.4
MS.gene035191.t1 AT3G46640 55.556 54 23 1 262 315 144 196 4.52e-12 67.4
MS.gene035191.t1 AT3G46640 55.556 54 23 1 262 315 144 196 5.22e-12 67.4
MS.gene035191.t1 AT5G58080 59.259 54 21 1 262 315 194 246 6.65e-12 68.2
MS.gene035191.t1 AT3G25790 56.364 55 24 0 267 321 201 255 7.10e-12 67.4
MS.gene035191.t1 AT2G20570 53.125 64 29 1 255 318 146 208 1.64e-11 66.6
MS.gene035191.t1 AT1G25550 60.784 51 20 0 262 312 209 259 2.45e-11 64.7
MS.gene035191.t1 AT4G37180 53.226 62 28 1 252 312 199 260 4.89e-11 63.9
MS.gene035191.t1 AT1G13300 49.206 63 32 0 262 324 181 243 5.83e-11 64.3
MS.gene035191.t1 AT1G49190 52.632 57 24 1 262 315 215 271 6.48e-11 64.7

Find 121 sgRNAs with CRISPR-Local

Find 367 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTGTTCATGCAGCCGTTTC+TGG 0.141434 7.2:-12935065 None:intergenic
ACGATACTTTGACTTCTAAT+TGG 0.176459 7.2:+12932195 MS.gene035191:CDS
ATCTGGTGTTGAGCCATTTA+AGG 0.223957 7.2:+12936823 MS.gene035191:CDS
CTTAGAAGCTTGTTGAGATT+TGG 0.249037 7.2:-12937026 None:intergenic
TGACTTGCAATGGTCCATTT+TGG 0.253593 7.2:-12936930 None:intergenic
TTACCGTATTCTTCAAATAA+TGG 0.301607 7.2:+12931963 MS.gene035191:CDS
TCTGGGGTATGTCTCCTCTA+AGG 0.303816 7.2:-12931721 None:intergenic
CAAATCTCAACAAGCTTCTA+AGG 0.304177 7.2:+12937027 MS.gene035191:CDS
CGGCTGCGAATCAGAAAATC+TGG 0.314389 7.2:-12931739 None:intergenic
GCTGATGATGATGCCTTAAA+TGG 0.316466 7.2:-12936836 None:intergenic
CATCTGTCCTTTGACGCTTA+GGG 0.327736 7.2:-12937087 None:intergenic
TCATCTGTCCTTTGACGCTT+AGG 0.327888 7.2:-12937088 None:intergenic
CAACAACTTCCAGCTCTATC+TGG 0.330349 7.2:+12932420 MS.gene035191:CDS
TCATGTTAAAAGCCACTTAC+AGG 0.337959 7.2:+12932713 MS.gene035191:CDS
TCCCTATGTTATTCAGTTGC+TGG 0.340671 7.2:-12931656 None:intergenic
TGAATTGGAAGCATCCAAAA+TGG 0.350129 7.2:+12936916 MS.gene035191:CDS
GAGCGGTGCCTGCAATATTA+TGG 0.356005 7.2:+12932109 MS.gene035191:CDS
CTCGGTGGCCATAATATTGC+AGG 0.370683 7.2:-12932117 None:intergenic
TGTCCATCCAACACCCTTAG+AGG 0.370709 7.2:+12931707 MS.gene035191:CDS
TTGTGAAGATGACTTTGAAA+TGG 0.383554 7.2:-12932367 None:intergenic
ATGAGCTTCAGCACACCCTT+AGG 0.390446 7.2:-12932666 None:intergenic
TGAGCTTCACGAGGCATTTG+TGG 0.391511 7.2:+12932518 MS.gene035191:CDS
CTGAATAACATAGGGATGTC+TGG 0.398764 7.2:+12931663 MS.gene035191:CDS
TGGAAGTTGTTGGTGACCTT+GGG 0.401493 7.2:-12932409 None:intergenic
AAAATGGACCATTGCAAGTC+AGG 0.405684 7.2:+12936932 MS.gene035191:CDS
TAGAGACGAAATATCTTCAA+TGG 0.411601 7.2:-12933618 None:intergenic
TGCAGGCACCGCTCTCTACT+TGG 0.420513 7.2:-12932100 None:intergenic
ATTGCTTCTCAAACATCATC+TGG 0.427142 7.2:-12936796 None:intergenic
TTTGAGAAGCAATGCAAATC+TGG 0.429240 7.2:+12936806 MS.gene035191:CDS
CCAATGGAAACAGTGCTTCA+TGG 0.436394 7.2:+12932018 MS.gene035191:CDS
CAGATAGAGCTGGAAGTTGT+TGG 0.437915 7.2:-12932419 None:intergenic
TTTGGTAGGAGAGTCTTTCA+TGG 0.441273 7.2:-12936891 None:intergenic
GTCATTGAGTAACATGGCTT+CGG 0.445080 7.2:+12931935 MS.gene035191:CDS
TGAGCTTCAGCACACCCTTA+GGG 0.446411 7.2:-12932665 None:intergenic
AGTCCATCGCATTCGTGGCT+TGG 0.450820 7.2:-12932493 None:intergenic
GGTCCATTATTTGAAGAATA+CGG 0.453015 7.2:-12931966 None:intergenic
AGAAGCTTGTTGAGATTTGG+AGG 0.454821 7.2:-12937023 None:intergenic
AGAGACGAAATATCTTCAAT+GGG 0.455908 7.2:-12933617 None:intergenic
TTTGACGCTTAGGGGCTTGA+GGG 0.457431 7.2:-12937078 None:intergenic
GTTGTTGGTGACCTTGGGAT+TGG 0.458647 7.2:-12932404 None:intergenic
TGCGAATAGAAGAGCAAGGC+AGG 0.459388 7.2:+12936768 MS.gene035191:CDS
CTGGAAGTTGTTGGTGACCT+TGG 0.461134 7.2:-12932410 None:intergenic
CCATGAAGCACTGTTTCCAT+TGG 0.464624 7.2:-12932018 None:intergenic
ACAAATGCCTCGTGAAGCTC+AGG 0.468546 7.2:-12932516 None:intergenic
TATCGTCATCACTGATTAGC+TGG 0.473545 7.2:-12932178 None:intergenic
CCCTATGTTATTCAGTTGCT+GGG 0.475601 7.2:-12931655 None:intergenic
TACTTGGTTATTATCAATTG+AGG 0.476017 7.2:-12932084 None:intergenic
GCAGAATTTGCTGAGGAAGA+TGG 0.480337 7.2:-12932465 None:intergenic
CTTTGACGCTTAGGGGCTTG+AGG 0.481559 7.2:-12937079 None:intergenic
TATGTCTCCTCTAAGGGTGT+TGG 0.482313 7.2:-12931714 None:intergenic
TGAAGATCGTTAGAATATCC+AGG 0.483197 7.2:-12931855 None:intergenic
GTACTACCATTAGCTTGATC+AGG 0.485584 7.2:-12936956 None:intergenic
TGATTCGCAGCCGACTTATG+TGG 0.488057 7.2:+12931749 MS.gene035191:CDS
TTATTTGAAGAATACGGTAA+TGG 0.489486 7.2:-12931960 None:intergenic
TTCTAAGCGAAATGATTGGC+AGG 0.490400 7.2:+12932145 MS.gene035191:CDS
TCAGCCATTGAAAATCCATC+TGG 0.492315 7.2:+12936854 MS.gene035191:CDS
TAATGTGTTGATGTTGTAGA+AGG 0.498623 7.2:-12931993 None:intergenic
TCAGGAGTCCATCGCATTCG+TGG 0.504175 7.2:-12932498 None:intergenic
TCAGGACCTGATCAAGCTAA+TGG 0.505420 7.2:+12936950 MS.gene035191:CDS
TCAACGAAATGCAGAAATAC+AGG 0.509552 7.2:+12932801 MS.gene035191:intron
AGAAATCAAGAAAACTAGGC+AGG 0.510355 7.2:-12932052 None:intergenic
GATCTTTCAATTGAGAAAGC+AGG 0.512244 7.2:-12931627 None:intergenic
GCTGGAAGCAGTTGAGAAGC+TGG 0.513069 7.2:+12936997 MS.gene035191:CDS
CTGAAGCTCATGAAAGTTGA+AGG 0.515183 7.2:+12932678 MS.gene035191:CDS
CACGGTTGAGGAAAGCTCGC+TGG 0.521650 7.2:+12936979 MS.gene035191:CDS
ATAAGTTCTAGTGGAGCAGT+TGG 0.527402 7.2:+12931813 MS.gene035191:CDS
TTCTACAGGAGCTACCCCTA+AGG 0.528407 7.2:+12932650 MS.gene035191:intron
TAATGGTAGTACCACGGTTG+AGG 0.529038 7.2:+12936967 MS.gene035191:CDS
AGCGAAATGATTGGCAGGAG+TGG 0.533310 7.2:+12932150 MS.gene035191:CDS
CTCAAGCCCCTAAGCGTCAA+AGG 0.535629 7.2:+12937080 MS.gene035191:CDS
GGCTGCGAATCAGAAAATCT+GGG 0.541784 7.2:-12931738 None:intergenic
TGCAGATGGAGGTCCAGAAA+CGG 0.542705 7.2:+12935052 MS.gene035191:CDS
ATCTGTCCTTTGACGCTTAG+GGG 0.544083 7.2:-12937086 None:intergenic
GCAGAGAAATCAAGAAAACT+AGG 0.544687 7.2:-12932056 None:intergenic
GATCAGGTCCTGACTTGCAA+TGG 0.546117 7.2:-12936940 None:intergenic
TATTCAAGATCTTGAGCCAA+AGG 0.548434 7.2:+12932238 MS.gene035191:CDS
GAAATCAAGAAAACTAGGCA+GGG 0.552022 7.2:-12932051 None:intergenic
TCAAGTCATATAAGTTCTAG+TGG 0.552138 7.2:+12931804 MS.gene035191:CDS
GCGAAATGATTGGCAGGAGT+GGG 0.552812 7.2:+12932151 MS.gene035191:CDS
CTGGGGTATGTCTCCTCTAA+GGG 0.553089 7.2:-12931720 None:intergenic
CCCAGCAACTGAATAACATA+GGG 0.563465 7.2:+12931655 MS.gene035191:CDS
ACATCAACACATTATTCCAA+TGG 0.565212 7.2:+12932002 MS.gene035191:CDS
TAAGTTCTAGTGGAGCAGTT+GGG 0.568512 7.2:+12931814 MS.gene035191:CDS
GGATGGACAGACAACGATGA+AGG 0.572042 7.2:-12931693 None:intergenic
GCCCAGCAACTGAATAACAT+AGG 0.578966 7.2:+12931654 MS.gene035191:CDS
AAATGGTACATACCTGTAAG+TGG 0.579249 7.2:-12932725 None:intergenic
TTCGCAGTCATTGAGTAACA+TGG 0.580455 7.2:+12931929 MS.gene035191:CDS
TATGTACCTTCAGATGACTC+TGG 0.581225 7.2:-12932839 None:intergenic
GGAAGCTCTACGACTGCAGA+TGG 0.586016 7.2:+12935038 MS.gene035191:CDS
ACGGCTGCATGAACAGCTTG+AGG 0.587387 7.2:+12935071 MS.gene035191:CDS
TCTCCTCTAAGGGTGTTGGA+TGG 0.587533 7.2:-12931710 None:intergenic
GGCTGTTGCAGAATTTGCTG+AGG 0.587897 7.2:-12932472 None:intergenic
GAAGATCGTTAGAATATCCA+GGG 0.589349 7.2:-12931854 None:intergenic
TGACAGTGGTATTGAGATCA+CGG 0.590168 7.2:+12935017 MS.gene035191:intron
TCTACAGGAGCTACCCCTAA+GGG 0.595403 7.2:+12932651 MS.gene035191:intron
AAATCAAGAAAACTAGGCAG+GGG 0.598415 7.2:-12932050 None:intergenic
GAGGCTGTCAATCAACTTGG+TGG 0.598508 7.2:+12932540 MS.gene035191:CDS
GTATTCTTCAAATAATGGAC+CGG 0.599927 7.2:+12931968 MS.gene035191:CDS
CAGCCAAGCCACGAATGCGA+TGG 0.603901 7.2:+12932490 MS.gene035191:CDS
AGGCTGTCAATCAACTTGGT+GGG 0.604087 7.2:+12932541 MS.gene035191:CDS
GCTTCACGAGGCATTTGTGG+AGG 0.611503 7.2:+12932521 MS.gene035191:CDS
GTGGAGGCTGTCAATCAACT+TGG 0.611778 7.2:+12932537 MS.gene035191:CDS
GAGCTTCAGCACACCCTTAG+GGG 0.611866 7.2:-12932664 None:intergenic
ATTTCGCTTAGAAAACTCCT+CGG 0.613155 7.2:-12932135 None:intergenic
GTTGATGTTGTAGAAGGTAC+CGG 0.613506 7.2:-12931987 None:intergenic
CTATCTGGAGAAAATCATGT+TGG 0.628306 7.2:+12932435 MS.gene035191:CDS
TCGGCAGGACACCAATCCCA+AGG 0.630813 7.2:+12932393 MS.gene035191:CDS
TATAGACCAGAGTCATCTGA+AGG 0.642332 7.2:+12932833 MS.gene035191:CDS
GTGTCAGAAGACACTCCAGA+TGG 0.648683 7.2:-12936869 None:intergenic
CAGCGAGCTTTCCTCAACCG+TGG 0.657234 7.2:-12936978 None:intergenic
GATAATAACCAAGTAGAGAG+CGG 0.662017 7.2:+12932092 MS.gene035191:CDS
ATGGACTCCTGAGCTTCACG+AGG 0.664112 7.2:+12932509 MS.gene035191:CDS
AGCTCTACGACTGCAGATGG+AGG 0.664727 7.2:+12935041 MS.gene035191:CDS
GCTTCTCAAACATCATCTGG+AGG 0.671425 7.2:-12936793 None:intergenic
TCGCTTAGAAAACTCCTCGG+TGG 0.696184 7.2:-12932132 None:intergenic
CAGTTGCGAATAGAAGAGCA+AGG 0.699827 7.2:+12936764 MS.gene035191:CDS
GCTGCGAATCAGAAAATCTG+GGG 0.701278 7.2:-12931737 None:intergenic
CTGCAATATTATGGCCACCG+AGG 0.705670 7.2:+12932118 MS.gene035191:CDS
GAGACGAAATATCTTCAATG+GGG 0.720068 7.2:-12933616 None:intergenic
TCAAGCTAATGGTAGTACCA+CGG 0.727330 7.2:+12936961 MS.gene035191:CDS
AAGATCGTTAGAATATCCAG+GGG 0.749204 7.2:-12931853 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCGTTTTTTAATAAAAAAA+CGG + chr7.2:12935527-12935546 MS.gene035191:intron 10.0%
!! AACAGATAAACAAAAAATTA+TGG + chr7.2:12934709-12934728 MS.gene035191:intron 15.0%
!! AATTTATTTAAGAAACATGT+TGG + chr7.2:12932313-12932332 MS.gene035191:intron 15.0%
!! ACAGATAAACAAAAAATTAT+GGG + chr7.2:12934710-12934729 MS.gene035191:intron 15.0%
!! ATTTATCATCTATAACTTAA+TGG + chr7.2:12935219-12935238 MS.gene035191:intron 15.0%
!! ATTTATTTAAGAAACATGTT+GGG + chr7.2:12932314-12932333 MS.gene035191:intron 15.0%
!! TATGTAAAAAAGAATTTGAA+TGG + chr7.2:12933093-12933112 MS.gene035191:intron 15.0%
!! TGTAATTAATTACACAAATA+AGG - chr7.2:12933543-12933562 None:intergenic 15.0%
!!! TAAGATTTTCTATTTTCTTT+CGG - chr7.2:12934371-12934390 None:intergenic 15.0%
!!! TCGTTTTTTAATAAAAAAAC+GGG + chr7.2:12935528-12935547 MS.gene035191:intron 15.0%
!!! TGAATAATCGTTTTTTTTAA+TGG + chr7.2:12935250-12935269 MS.gene035191:intron 15.0%
!! AAAGAATTAAGATCTTACTT+TGG - chr7.2:12932596-12932615 None:intergenic 20.0%
!! AAAGGAAGTAGAATAATATT+CGG + chr7.2:12935496-12935515 MS.gene035191:intron 20.0%
!! AACAATACATAACAAAATAG+AGG - chr7.2:12933688-12933707 None:intergenic 20.0%
!! AACCAAAATATTGTATACAA+AGG - chr7.2:12933162-12933181 None:intergenic 20.0%
!! AAGCACATAAAAAATAATTG+AGG - chr7.2:12932628-12932647 None:intergenic 20.0%
!! AATCTAATCAATCAATCTAA+AGG + chr7.2:12934090-12934109 MS.gene035191:intron 20.0%
!! ACCAAAATATTGTATACAAA+GGG - chr7.2:12933161-12933180 None:intergenic 20.0%
!! ATGATATATGCATAATTACT+AGG - chr7.2:12934671-12934690 None:intergenic 20.0%
!! CTAATAAAAGATTAGACTAA+AGG - chr7.2:12933399-12933418 None:intergenic 20.0%
!! CTACATTTCAAACAATATTA+CGG - chr7.2:12936589-12936608 None:intergenic 20.0%
!! CTATAAAAGCAATAAATAAG+TGG + chr7.2:12935635-12935654 MS.gene035191:intron 20.0%
!! GGGAAAAAAGAAAATATTTA+AGG - chr7.2:12936492-12936511 None:intergenic 20.0%
!! TATTTGAATATAAGCATTCA+AGG - chr7.2:12932774-12932793 None:intergenic 20.0%
!! TCTATGTCTCTATTTATAAA+AGG + chr7.2:12934543-12934562 MS.gene035191:intron 20.0%
!! TGTTAGTATGTTAATTGTTA+TGG + chr7.2:12935277-12935296 MS.gene035191:intron 20.0%
!! TTATGTATTGTTGTATTTCT+AGG + chr7.2:12933696-12933715 MS.gene035191:intron 20.0%
!! TTGACAAAATGTTATCTTTA+TGG - chr7.2:12936358-12936377 None:intergenic 20.0%
!!! AAATAAAATGTCACTTAATC+TGG + chr7.2:12936119-12936138 MS.gene035191:intron 20.0%
!!! AAATACTTTTAGGATTTACT+CGG + chr7.2:12935402-12935421 MS.gene035191:intron 20.0%
!!! AATAAAATGTCACTTAATCT+GGG + chr7.2:12936120-12936139 MS.gene035191:intron 20.0%
!!! AGTGTGAATAAAATACTTTT+AGG + chr7.2:12935392-12935411 MS.gene035191:intron 20.0%
!!! CAAATTTTTGCATATTAGTT+AGG + chr7.2:12932897-12932916 MS.gene035191:intron 20.0%
!!! CTATATTTGACTTCTTTAAA+GGG + chr7.2:12933801-12933820 MS.gene035191:intron 20.0%
!!! TATATTTGACTTCTTTAAAG+GGG + chr7.2:12933802-12933821 MS.gene035191:intron 20.0%
!!! TCTATATTTGACTTCTTTAA+AGG + chr7.2:12933800-12933819 MS.gene035191:intron 20.0%
!!! TGATAAATTTCTAAAAGTCA+TGG - chr7.2:12935207-12935226 None:intergenic 20.0%
!!! TTTTAGAAGTAGTAAGATTT+TGG - chr7.2:12935959-12935978 None:intergenic 20.0%
! AAAAGCAATAAATAAGTGGA+TGG + chr7.2:12935639-12935658 MS.gene035191:intron 25.0%
! AAGTCTTAAATTGTTGTCTA+TGG + chr7.2:12933128-12933147 MS.gene035191:intron 25.0%
! AATTGCCTTTATTAAGTAGA+TGG + chr7.2:12932976-12932995 MS.gene035191:intron 25.0%
! ACAGTTCATTGGAAAAAAAA+TGG - chr7.2:12933940-12933959 None:intergenic 25.0%
! ATATGCATGTGCATTTAAAA+CGG + chr7.2:12933894-12933913 MS.gene035191:intron 25.0%
! ATATTACTAGCTAGGATAAT+TGG - chr7.2:12934218-12934237 None:intergenic 25.0%
! CAAAAAAAAATGTCTTGAAG+AGG - chr7.2:12936456-12936475 None:intergenic 25.0%
! CAATAAAAAAGTTCACTGTT+AGG - chr7.2:12933448-12933467 None:intergenic 25.0%
! GAAACTATATAGATAAAGTG+AGG - chr7.2:12935810-12935829 None:intergenic 25.0%
! GAACAGCATATAAAACATTT+AGG - chr7.2:12934050-12934069 None:intergenic 25.0%
! GGTAAAAATTTAATAGCCAA+TGG - chr7.2:12932939-12932958 None:intergenic 25.0%
! GGTTATGAGAATATGATATT+TGG - chr7.2:12935847-12935866 None:intergenic 25.0%
! GTCAATTTACATAATAGAAC+TGG + chr7.2:12935713-12935732 MS.gene035191:intron 25.0%
! GTGAATAAATTCAAGGAAAA+TGG + chr7.2:12935457-12935476 MS.gene035191:intron 25.0%
! TACTTGGTTATTATCAATTG+AGG - chr7.2:12932087-12932106 None:intergenic 25.0%
! TATCATCTGTTAATCTGATA+AGG + chr7.2:12934685-12934704 MS.gene035191:intron 25.0%
! TATTATTCTACTTCCTTTAC+AGG - chr7.2:12935494-12935513 None:intergenic 25.0%
! TCTTTGAATCTAACACAAAA+GGG - chr7.2:12936738-12936757 None:intergenic 25.0%
! TGATTGATTAGATTAGATGT+TGG - chr7.2:12934084-12934103 None:intergenic 25.0%
! TGTAAATTGACTATGCATTT+AGG - chr7.2:12935704-12935723 None:intergenic 25.0%
! TGTATAATTGTAGATACTTG+TGG + chr7.2:12936226-12936245 MS.gene035191:intron 25.0%
! TTACCGTATTCTTCAAATAA+TGG + chr7.2:12931963-12931982 MS.gene035191:CDS 25.0%
! TTATTTGAAGAATACGGTAA+TGG - chr7.2:12931963-12931982 None:intergenic 25.0%
! TTCTTTGAATCTAACACAAA+AGG - chr7.2:12936739-12936758 None:intergenic 25.0%
!! AAAGTCATCTTCACAATTTT+CGG + chr7.2:12932374-12932393 MS.gene035191:CDS 25.0%
!! AGTATTTTATTCACACTAGT+TGG - chr7.2:12935389-12935408 None:intergenic 25.0%
!! ATATTTGACTTCTTTAAAGG+GGG + chr7.2:12933803-12933822 MS.gene035191:intron 25.0%
!! CAATTTCTTAGACAACATTT+TGG + chr7.2:12933732-12933751 MS.gene035191:intron 25.0%
!! CTTTTATTAGATTTGCGTAT+TGG + chr7.2:12933409-12933428 MS.gene035191:intron 25.0%
!! GAATATGATATTTGGTGAAA+AGG - chr7.2:12935839-12935858 None:intergenic 25.0%
!! GGAAATCATTTTCTCAAAAA+TGG - chr7.2:12933248-12933267 None:intergenic 25.0%
!! GTATTTTATTCACACTAGTT+GGG - chr7.2:12935388-12935407 None:intergenic 25.0%
!! TATTTTATTCACACTAGTTG+GGG - chr7.2:12935387-12935406 None:intergenic 25.0%
!! TCATTCTCTTTTACAAATCA+AGG - chr7.2:12936428-12936447 None:intergenic 25.0%
!! TCTTTTACAAATCAAGGAAT+GGG - chr7.2:12936422-12936441 None:intergenic 25.0%
!! TTGTCAGATTTTCTGTTAAT+TGG + chr7.2:12933002-12933021 MS.gene035191:intron 25.0%
!!! ATATTTGGTTTTGTTGTAGT+GGG + chr7.2:12933984-12934003 MS.gene035191:intron 25.0%
!!! ATTATGAAAGATACTGATTC+AGG + chr7.2:12934333-12934352 MS.gene035191:intron 25.0%
!!! CATTTTTGGATAAACTGATT+AGG + chr7.2:12936527-12936546 MS.gene035191:intron 25.0%
!!! TACAATTTGTTGAATACTGT+TGG + chr7.2:12933568-12933587 MS.gene035191:intron 25.0%
!!! TAGACATTTTTAATTAGAGC+AGG - chr7.2:12934624-12934643 None:intergenic 25.0%
AAATTCCAAGTTTCTCGATA+TGG - chr7.2:12933042-12933061 None:intergenic 30.0%
AAGAGCCATCTACTTAATAA+AGG - chr7.2:12932984-12933003 None:intergenic 30.0%
AATGCACATTTCGTTCATTT+GGG + chr7.2:12936058-12936077 MS.gene035191:intron 30.0%
AATTCTACAGCAAACTTTAC+AGG - chr7.2:12932960-12932979 None:intergenic 30.0%
ACATCAACACATTATTCCAA+TGG + chr7.2:12932002-12932021 MS.gene035191:CDS 30.0%
ACGCAGTAGTTAAAATTCAA+TGG - chr7.2:12933269-12933288 None:intergenic 30.0%
AGAGACGAAATATCTTCAAT+GGG - chr7.2:12933620-12933639 None:intergenic 30.0%
ATGTCTAACTAATTCCTAGT+TGG + chr7.2:12934637-12934656 MS.gene035191:intron 30.0%
CAAAAATTTGTCCATGCAAA+AGG - chr7.2:12932887-12932906 None:intergenic 30.0%
CTAGAATGATATTACTAGCT+AGG - chr7.2:12934226-12934245 None:intergenic 30.0%
CTCACATTAAGTGATGTTTA+AGG + chr7.2:12935597-12935616 MS.gene035191:intron 30.0%
CTTTATGCATATGGCATTTA+GGG + chr7.2:12936609-12936628 MS.gene035191:intron 30.0%
CTTTGAATCTAACACAAAAG+GGG - chr7.2:12936737-12936756 None:intergenic 30.0%
GAGCATTACTCTATATTTCA+AGG - chr7.2:12933521-12933540 None:intergenic 30.0%
GAGCTTAGTGAATAAATTCA+AGG + chr7.2:12935450-12935469 MS.gene035191:intron 30.0%
GAGTAAAATGCTAGAAAAGT+AGG + chr7.2:12934755-12934774 MS.gene035191:intron 30.0%
GCAAAGTTATAACAGTTCAT+TGG - chr7.2:12933951-12933970 None:intergenic 30.0%
GGTCCATTATTTGAAGAATA+CGG - chr7.2:12931969-12931988 None:intergenic 30.0%
GTAATGAAAACCTTAACCTT+TGG - chr7.2:12932257-12932276 None:intergenic 30.0%
TAACTACTGCGTAATTAGTT+GGG + chr7.2:12933277-12933296 MS.gene035191:intron 30.0%
TAATGCACATTTCGTTCATT+TGG + chr7.2:12936057-12936076 MS.gene035191:intron 30.0%
TAGAGACGAAATATCTTCAA+TGG - chr7.2:12933621-12933640 None:intergenic 30.0%
TATGCATAATTACTAGGAAC+AGG - chr7.2:12934665-12934684 None:intergenic 30.0%
TGTCTAACTAATTCCTAGTT+GGG + chr7.2:12934638-12934657 MS.gene035191:intron 30.0%
TGTTATAACTTTGCAACAGT+AGG + chr7.2:12933957-12933976 MS.gene035191:intron 30.0%
TTAACTACTGCGTAATTAGT+TGG + chr7.2:12933276-12933295 MS.gene035191:intron 30.0%
TTGCATATTAGTTAGGACAT+AGG + chr7.2:12932904-12932923 MS.gene035191:intron 30.0%
TTTCCATTCATCATTGATGT+CGG + chr7.2:12934157-12934176 MS.gene035191:intron 30.0%
TTTGAATCTAACACAAAAGG+GGG - chr7.2:12936736-12936755 None:intergenic 30.0%
! ACGATACTTTGACTTCTAAT+TGG + chr7.2:12932195-12932214 MS.gene035191:CDS 30.0%
! AGATCTTTTTCCACATAAGT+CGG - chr7.2:12931762-12931781 None:intergenic 30.0%
! AGGATTTGTTTGTTTCTTCT+TGG + chr7.2:12936547-12936566 MS.gene035191:intron 30.0%
! AGTTTTCTAAGCGAAATGAT+TGG + chr7.2:12932141-12932160 MS.gene035191:CDS 30.0%
! ATTAGATGTTGGTAAAAGCT+CGG - chr7.2:12934073-12934092 None:intergenic 30.0%
! CTCTTTTACAAATCAAGGAA+TGG - chr7.2:12936423-12936442 None:intergenic 30.0%
! GCCCTTTGTATACAATATTT+TGG + chr7.2:12933157-12933176 MS.gene035191:intron 30.0%
! GGATTTGTTTGTTTCTTCTT+GGG + chr7.2:12936548-12936567 MS.gene035191:intron 30.0%
! GTATTATAATGCCTTTTGCA+TGG + chr7.2:12932873-12932892 MS.gene035191:intron 30.0%
! TAATGTGTTGATGTTGTAGA+AGG - chr7.2:12931996-12932015 None:intergenic 30.0%
! TATGTCTCTATGTAAGCTTT+TGG + chr7.2:12934882-12934901 MS.gene035191:intron 30.0%
! TATTTTCTTTTTTCCCCTTC+TGG + chr7.2:12936496-12936515 MS.gene035191:intron 30.0%
! TCAAGTCATATAAGTTCTAG+TGG + chr7.2:12931804-12931823 MS.gene035191:CDS 30.0%
! TTGTGAAGATGACTTTGAAA+TGG - chr7.2:12932370-12932389 None:intergenic 30.0%
! TTTAACCTCCTTTTCAAACT+AGG + chr7.2:12935931-12935950 MS.gene035191:intron 30.0%
! TTTTATGTGCTTCTTTCTAC+AGG + chr7.2:12932636-12932655 MS.gene035191:intron 30.0%
! TTTTGGATCCTAGTTTGAAA+AGG - chr7.2:12935942-12935961 None:intergenic 30.0%
!! ACTCATTTTGTTTCTTTAGG+CGG + chr7.2:12932338-12932357 MS.gene035191:intron 30.0%
!! ATTATGGGTGTTTTCAAGAT+TGG + chr7.2:12934725-12934744 MS.gene035191:intron 30.0%
!! GAAATGTAGCTTTATGCATA+TGG + chr7.2:12936600-12936619 MS.gene035191:intron 30.0%
!! GGAACTCATTTTGTTTCTTT+AGG + chr7.2:12932335-12932354 MS.gene035191:intron 30.0%
!! GTATTCTTCAAATAATGGAC+CGG + chr7.2:12931968-12931987 MS.gene035191:CDS 30.0%
!!! AGTGAACTTTTTTATTGACC+GGG + chr7.2:12933451-12933470 MS.gene035191:intron 30.0%
!!! CAGTGAACTTTTTTATTGAC+CGG + chr7.2:12933450-12933469 MS.gene035191:intron 30.0%
!!! CATATTTGGTTTTGTTGTAG+TGG + chr7.2:12933983-12934002 MS.gene035191:intron 30.0%
!!! GGTCATTTGTTTTGTTTGAA+GGG + chr7.2:12934178-12934197 MS.gene035191:intron 30.0%
AAAAATGTCCTGATTCCAGA+AGG - chr7.2:12936514-12936533 None:intergenic 35.0%
AAAATGTCCTGATTCCAGAA+GGG - chr7.2:12936513-12936532 None:intergenic 35.0%
AAATCAAGAAAACTAGGCAG+GGG - chr7.2:12932053-12932072 None:intergenic 35.0%
AAATGGTACATACCTGTAAG+TGG - chr7.2:12932728-12932747 None:intergenic 35.0%
AAATGGTTTACCCTTACATG+AGG - chr7.2:12933231-12933250 None:intergenic 35.0%
AACATCAAATGCACAAAACC+CGG - chr7.2:12933472-12933491 None:intergenic 35.0%
AACATCACTTAATGTGAGAC+AGG - chr7.2:12935595-12935614 None:intergenic 35.0%
AAGATCGTTAGAATATCCAG+GGG - chr7.2:12931856-12931875 None:intergenic 35.0%
ACACAGACATGAATAGTGAT+TGG + chr7.2:12934969-12934988 MS.gene035191:intron 35.0%
ACATCACTTAATGTGAGACA+GGG - chr7.2:12935594-12935613 None:intergenic 35.0%
ACCATTTGCTTTATCTTCCA+AGG + chr7.2:12932741-12932760 MS.gene035191:intron 35.0%
AGAAATCAAGAAAACTAGGC+AGG - chr7.2:12932055-12932074 None:intergenic 35.0%
AGAAGAAAAACGTCTTACAG+TGG + chr7.2:12934437-12934456 MS.gene035191:intron 35.0%
ATGCACATTTCGTTCATTTG+GGG + chr7.2:12936059-12936078 MS.gene035191:intron 35.0%
ATTAGTTAGGACATAGGATG+AGG + chr7.2:12932910-12932929 MS.gene035191:intron 35.0%
ATTGCTTCTCAAACATCATC+TGG - chr7.2:12936799-12936818 None:intergenic 35.0%
ATTTCGCTTAGAAAACTCCT+CGG - chr7.2:12932138-12932157 None:intergenic 35.0%
CAAAACTCTTTGACTCTCTT+CGG - chr7.2:12933339-12933358 None:intergenic 35.0%
CAAATCTCAACAAGCTTCTA+AGG + chr7.2:12937027-12937046 MS.gene035191:CDS 35.0%
CAGCAGATGAGATAACTTTA+CGG - chr7.2:12934311-12934330 None:intergenic 35.0%
CATCAATAAAGTCTACAGCA+AGG + chr7.2:12934792-12934811 MS.gene035191:intron 35.0%
CTAAGTTATATGGATCAGGA+AGG + chr7.2:12934817-12934836 MS.gene035191:intron 35.0%
CTATCTGGAGAAAATCATGT+TGG + chr7.2:12932435-12932454 MS.gene035191:CDS 35.0%
CTCTCCTACCAAAAATGAAT+TGG + chr7.2:12936901-12936920 MS.gene035191:CDS 35.0%
CTGTATCAGATCATCTGAAA+AGG - chr7.2:12936708-12936727 None:intergenic 35.0%
GAAATCAAGAAAACTAGGCA+GGG - chr7.2:12932054-12932073 None:intergenic 35.0%
GAAGATCGTTAGAATATCCA+GGG - chr7.2:12931857-12931876 None:intergenic 35.0%
GAGACATAGAATGTAAGAGA+AGG - chr7.2:12934533-12934552 None:intergenic 35.0%
GAGACGAAATATCTTCAATG+GGG - chr7.2:12933619-12933638 None:intergenic 35.0%
GATAATAACCAAGTAGAGAG+CGG + chr7.2:12932092-12932111 MS.gene035191:CDS 35.0%
GATCTTTCAATTGAGAAAGC+AGG - chr7.2:12931630-12931649 None:intergenic 35.0%
GCAACAGTAGGTAACATATT+TGG + chr7.2:12933969-12933988 MS.gene035191:intron 35.0%
GCAGAGAAATCAAGAAAACT+AGG - chr7.2:12932059-12932078 None:intergenic 35.0%
GCTTTATGCATATGGCATTT+AGG + chr7.2:12936608-12936627 MS.gene035191:intron 35.0%
GTCTAACTAATTCCTAGTTG+GGG + chr7.2:12934639-12934658 MS.gene035191:intron 35.0%
TATTCAAGATCTTGAGCCAA+AGG + chr7.2:12932238-12932257 MS.gene035191:CDS 35.0%
TCAACGAAATGCAGAAATAC+AGG + chr7.2:12932801-12932820 MS.gene035191:intron 35.0%
TCATGTTAAAAGCCACTTAC+AGG + chr7.2:12932713-12932732 MS.gene035191:CDS 35.0%
TCCTTGGAAGATAAAGCAAA+TGG - chr7.2:12932745-12932764 None:intergenic 35.0%
TGAAGATCGTTAGAATATCC+AGG - chr7.2:12931858-12931877 None:intergenic 35.0%
TTGAATCTAACACAAAAGGG+GGG - chr7.2:12936735-12936754 None:intergenic 35.0%
TTTGAGAAGCAATGCAAATC+TGG + chr7.2:12936806-12936825 MS.gene035191:CDS 35.0%
! AAAGGCATGACAACTATAAG+AGG - chr7.2:12936690-12936709 None:intergenic 35.0%
! AGTGTTTTTCATGAGGTGAA+AGG - chr7.2:12931890-12931909 None:intergenic 35.0%
! ATTTGTTGAATACTGTTGGC+AGG + chr7.2:12933572-12933591 MS.gene035191:intron 35.0%
! CTTACAGTGGTATCTTTTCT+AGG + chr7.2:12934450-12934469 MS.gene035191:intron 35.0%
! CTTGCTGTAGACTTTATTGA+TGG - chr7.2:12934794-12934813 None:intergenic 35.0%
! GGATGCTTCCAATTCATTTT+TGG - chr7.2:12936912-12936931 None:intergenic 35.0%
! GTGTTTTTCATGAGGTGAAA+GGG - chr7.2:12931889-12931908 None:intergenic 35.0%
! GTTGTTGTGTGTAAGCTTTT+TGG + chr7.2:12934927-12934946 MS.gene035191:intron 35.0%
! TCATTGCTTGTTGAAGCAAA+TGG - chr7.2:12935868-12935887 None:intergenic 35.0%
! TTAGATGTTGGTAAAAGCTC+GGG - chr7.2:12934072-12934091 None:intergenic 35.0%
! TTTTGTTCTTGACACAGTTC+AGG - chr7.2:12934486-12934505 None:intergenic 35.0%
!! CAGCAAGGTTCTAAGTTATA+TGG + chr7.2:12934807-12934826 MS.gene035191:intron 35.0%
!! CTTAGAAGCTTGTTGAGATT+TGG - chr7.2:12937029-12937048 None:intergenic 35.0%
!! GGTTCTAAGTTATATGGATC+AGG + chr7.2:12934813-12934832 MS.gene035191:intron 35.0%
!! TGAATTGGAAGCATCCAAAA+TGG + chr7.2:12936916-12936935 MS.gene035191:CDS 35.0%
!!! CGGTCATTTGTTTTGTTTGA+AGG + chr7.2:12934177-12934196 MS.gene035191:intron 35.0%
!!! CTTCTAGAGTGTTTTTCATG+AGG - chr7.2:12931897-12931916 None:intergenic 35.0%
!!! GAGAATGTAGCTTTTGAAAC+TGG + chr7.2:12934118-12934137 MS.gene035191:intron 35.0%
!!! GCTTCCAATTCATTTTTGGT+AGG - chr7.2:12936908-12936927 None:intergenic 35.0%
!!! TTCTGGAATCAGGACATTTT+TGG + chr7.2:12936513-12936532 MS.gene035191:intron 35.0%
AAAATGGACCATTGCAAGTC+AGG + chr7.2:12936932-12936951 MS.gene035191:CDS 40.0%
AAATGTCCTGATTCCAGAAG+GGG - chr7.2:12936512-12936531 None:intergenic 40.0%
AACCATTGCATCATTGACAG+TGG + chr7.2:12935003-12935022 MS.gene035191:intron 40.0%
AGATCTTGAGCCAAAGGTTA+AGG + chr7.2:12932244-12932263 MS.gene035191:intron 40.0%
ATCTTCCAACTCTGAATCAG+TGG + chr7.2:12934397-12934416 MS.gene035191:intron 40.0%
ATTCAGAGTTGGAAGATGGT+GGG - chr7.2:12934394-12934413 None:intergenic 40.0%
CCCAGCAACTGAATAACATA+GGG + chr7.2:12931655-12931674 MS.gene035191:CDS 40.0%
CCCTATGTTATTCAGTTGCT+GGG - chr7.2:12931658-12931677 None:intergenic 40.0%
CGTAAAGTTATCTCATCTGC+TGG + chr7.2:12934309-12934328 MS.gene035191:intron 40.0%
CTAAAATAGCGTGCTTTGCT+GGG + chr7.2:12935973-12935992 MS.gene035191:intron 40.0%
CTCGGATTATCTACTTCAAC+TGG + chr7.2:12935420-12935439 MS.gene035191:intron 40.0%
CTGAAGCTCATGAAAGTTGA+AGG + chr7.2:12932678-12932697 MS.gene035191:CDS 40.0%
CTGAATAACATAGGGATGTC+TGG + chr7.2:12931663-12931682 MS.gene035191:CDS 40.0%
GCATTCAAGGAAACAATCCT+TGG - chr7.2:12932761-12932780 None:intergenic 40.0%
GTCATTGAGTAACATGGCTT+CGG + chr7.2:12931935-12931954 MS.gene035191:CDS 40.0%
GTCTAAACACAGTGTCTTAG+TGG + chr7.2:12935556-12935575 MS.gene035191:intron 40.0%
TAAAATAGCGTGCTTTGCTG+GGG + chr7.2:12935974-12935993 MS.gene035191:intron 40.0%
TAAATTGCACCCCTCTTTAG+AGG + chr7.2:12934016-12934035 MS.gene035191:intron 40.0%
TACCACTGTCAATGATGCAA+TGG - chr7.2:12935008-12935027 None:intergenic 40.0%
TATAGACCAGAGTCATCTGA+AGG + chr7.2:12932833-12932852 MS.gene035191:CDS 40.0%
TATGTACCTTCAGATGACTC+TGG - chr7.2:12932842-12932861 None:intergenic 40.0%
TCAAGCTAATGGTAGTACCA+CGG + chr7.2:12936961-12936980 MS.gene035191:CDS 40.0%
TCAGCCATTGAAAATCCATC+TGG + chr7.2:12936854-12936873 MS.gene035191:CDS 40.0%
TCCCTATGTTATTCAGTTGC+TGG - chr7.2:12931659-12931678 None:intergenic 40.0%
TCTTCCAACTCTGAATCAGT+GGG + chr7.2:12934398-12934417 MS.gene035191:intron 40.0%
TGAATCTAACACAAAAGGGG+GGG - chr7.2:12936734-12936753 None:intergenic 40.0%
TGACCGACATCAATGATGAA+TGG - chr7.2:12934163-12934182 None:intergenic 40.0%
TGAGTTAAGGGTTAAGGAGT+TGG - chr7.2:12935343-12935362 None:intergenic 40.0%
TGCACATTTCGTTCATTTGG+GGG + chr7.2:12936060-12936079 MS.gene035191:intron 40.0%
TGGATCCTAGTTTGAAAAGG+AGG - chr7.2:12935939-12935958 None:intergenic 40.0%
TGTTGTGTGTGTTAGTGACT+TGG - chr7.2:12934258-12934277 None:intergenic 40.0%
TTCGCAGTCATTGAGTAACA+TGG + chr7.2:12931929-12931948 MS.gene035191:CDS 40.0%
TTCTAAGCGAAATGATTGGC+AGG + chr7.2:12932145-12932164 MS.gene035191:CDS 40.0%
TTGCTCCATATCGAGAAACT+TGG + chr7.2:12933034-12933053 MS.gene035191:intron 40.0%
TTTGGTAGGAGAGTCTTTCA+TGG - chr7.2:12936894-12936913 None:intergenic 40.0%
! ACGGTTTGAGTTAAGGGTTA+AGG - chr7.2:12935349-12935368 None:intergenic 40.0%
! ACTGATTCAGAGTTGGAAGA+TGG - chr7.2:12934398-12934417 None:intergenic 40.0%
! AGCTCAAACGGTTTGAGTTA+AGG - chr7.2:12935356-12935375 None:intergenic 40.0%
! AGGAAATGACTCCTCTAAAG+AGG - chr7.2:12934030-12934049 None:intergenic 40.0%
! ATAAGTTCTAGTGGAGCAGT+TGG + chr7.2:12931813-12931832 MS.gene035191:CDS 40.0%
! ATCTGGTGTTGAGCCATTTA+AGG + chr7.2:12936823-12936842 MS.gene035191:CDS 40.0%
! CATATGTTTTCATCTTCCCC+TGG + chr7.2:12931837-12931856 MS.gene035191:CDS 40.0%
! CGAAGAGAGTCAAAGAGTTT+TGG + chr7.2:12933337-12933356 MS.gene035191:intron 40.0%
! GAAATGACTCCTCTAAAGAG+GGG - chr7.2:12934028-12934047 None:intergenic 40.0%
! GACGTTTTTCTTCTTGACCA+TGG - chr7.2:12934431-12934450 None:intergenic 40.0%
! GCTCAAACGGTTTGAGTTAA+GGG - chr7.2:12935355-12935374 None:intergenic 40.0%
! GCTGATGATGATGCCTTAAA+TGG - chr7.2:12936839-12936858 None:intergenic 40.0%
! GGAAATGACTCCTCTAAAGA+GGG - chr7.2:12934029-12934048 None:intergenic 40.0%
! GGAATGAAACTAGCCTGTAA+AGG + chr7.2:12935478-12935497 MS.gene035191:intron 40.0%
! GTACTACCATTAGCTTGATC+AGG - chr7.2:12936959-12936978 None:intergenic 40.0%
! GTTGATGTTGTAGAAGGTAC+CGG - chr7.2:12931990-12932009 None:intergenic 40.0%
! GTTTGTTTCTTCTTGGGTCA+TGG + chr7.2:12936554-12936573 MS.gene035191:intron 40.0%
! TAAGTTCTAGTGGAGCAGTT+GGG + chr7.2:12931814-12931833 MS.gene035191:CDS 40.0%
! TATCGTCATCACTGATTAGC+TGG - chr7.2:12932181-12932200 None:intergenic 40.0%
! TCATCTTCACAATTTTCGGC+AGG + chr7.2:12932378-12932397 MS.gene035191:CDS 40.0%
! TCTAAAATAGCGTGCTTTGC+TGG + chr7.2:12935972-12935991 MS.gene035191:intron 40.0%
! TGACAGTGGTATTGAGATCA+CGG + chr7.2:12935017-12935036 MS.gene035191:intron 40.0%
! TGATTTTCTCCAGATAGAGC+TGG - chr7.2:12932432-12932451 None:intergenic 40.0%
!! AGAAGCTTGTTGAGATTTGG+AGG - chr7.2:12937026-12937045 None:intergenic 40.0%
!! CACTCCAGATGGATTTTCAA+TGG - chr7.2:12936861-12936880 None:intergenic 40.0%
!! CATTTTGTTTCTTTAGGCGG+TGG + chr7.2:12932341-12932360 MS.gene035191:intron 40.0%
!! TGACTTGCAATGGTCCATTT+TGG - chr7.2:12936933-12936952 None:intergenic 40.0%
!!! AGCTTTTGAAACTGGACATG+TGG + chr7.2:12934126-12934145 MS.gene035191:intron 40.0%
!!! TAGTTTTTTTCCTCCTTGCC+AGG + chr7.2:12935300-12935319 MS.gene035191:intron 40.0%
!!! TTTTTTCCCCTTCTGGAATC+AGG + chr7.2:12936503-12936522 MS.gene035191:intron 40.0%
AAAGTGAGGAGACTACGACT+TGG - chr7.2:12935796-12935815 None:intergenic 45.0%
AACACAGTGTCTTAGTGGCA+AGG + chr7.2:12935561-12935580 MS.gene035191:intron 45.0%
AACCACAACAACCAAGCCTT+GGG - chr7.2:12934910-12934929 None:intergenic 45.0%
AAGTGAGGAGACTACGACTT+GGG - chr7.2:12935795-12935814 None:intergenic 45.0%
AATCAGTGGGTAGGTATCCA+TGG + chr7.2:12934411-12934430 MS.gene035191:intron 45.0%
ACATAGGATGAGGAGACCAT+TGG + chr7.2:12932920-12932939 MS.gene035191:intron 45.0%
AGGCTGTCAATCAACTTGGT+GGG + chr7.2:12932541-12932560 MS.gene035191:CDS 45.0%
ATCTGTCCTTTGACGCTTAG+GGG - chr7.2:12937089-12937108 None:intergenic 45.0%
ATTCACACTAGTTGGGGAGT+TGG - chr7.2:12935381-12935400 None:intergenic 45.0%
CAACAACTTCCAGCTCTATC+TGG + chr7.2:12932420-12932439 MS.gene035191:CDS 45.0%
CAGATAGAGCTGGAAGTTGT+TGG - chr7.2:12932422-12932441 None:intergenic 45.0%
CAGTTGCGAATAGAAGAGCA+AGG + chr7.2:12936764-12936783 MS.gene035191:CDS 45.0%
CATCTGTCCTTTGACGCTTA+GGG - chr7.2:12937090-12937109 None:intergenic 45.0%
CCAATGGAAACAGTGCTTCA+TGG + chr7.2:12932018-12932037 MS.gene035191:CDS 45.0%
CCTTACATGAGGACAGTGAA+GGG - chr7.2:12933220-12933239 None:intergenic 45.0%
CCTTCACTGTCCTCATGTAA+GGG + chr7.2:12933218-12933237 MS.gene035191:intron 45.0%
GAATCTAACACAAAAGGGGG+GGG - chr7.2:12936733-12936752 None:intergenic 45.0%
GACAGTGAAGGGACAAAGAA+AGG - chr7.2:12933209-12933228 None:intergenic 45.0%
GAGGAACAAGTGAAATGCCT+TGG - chr7.2:12936671-12936690 None:intergenic 45.0%
GATTCAGAGTTGGAAGATGG+TGG - chr7.2:12934395-12934414 None:intergenic 45.0%
GCCCAGCAACTGAATAACAT+AGG + chr7.2:12931654-12931673 MS.gene035191:CDS 45.0%
GCTGCGAATCAGAAAATCTG+GGG - chr7.2:12931740-12931759 None:intergenic 45.0%
GCTTCTCAAACATCATCTGG+AGG - chr7.2:12936796-12936815 None:intergenic 45.0%
GGCTGCGAATCAGAAAATCT+GGG - chr7.2:12931741-12931760 None:intergenic 45.0%
GTTAAGGGTTAAGGAGTTGG+AGG - chr7.2:12935340-12935359 None:intergenic 45.0%
TAATGGTAGTACCACGGTTG+AGG + chr7.2:12936967-12936986 MS.gene035191:CDS 45.0%
TCACATGCATGAACTGTCCA+AGG + chr7.2:12936651-12936670 MS.gene035191:intron 45.0%
TCAGGACCTGATCAAGCTAA+TGG + chr7.2:12936950-12936969 MS.gene035191:CDS 45.0%
TCATCTGTCCTTTGACGCTT+AGG - chr7.2:12937091-12937110 None:intergenic 45.0%
TGAATACTGTTGGCAGGAGT+TGG + chr7.2:12933578-12933597 MS.gene035191:intron 45.0%
TTCACACTAGTTGGGGAGTT+GGG - chr7.2:12935380-12935399 None:intergenic 45.0%
! AAGGGGGAGATGCATTTTAG+AGG + chr7.2:12933819-12933838 MS.gene035191:intron 45.0%
! AGGGGGAGATGCATTTTAGA+GGG + chr7.2:12933820-12933839 MS.gene035191:intron 45.0%
! ATGTAAGCTTTTGGTCCCCA+AGG + chr7.2:12934891-12934910 MS.gene035191:intron 45.0%
! TATGTCTCCTCTAAGGGTGT+TGG - chr7.2:12931717-12931736 None:intergenic 45.0%
!! CCATGAAGCACTGTTTCCAT+TGG - chr7.2:12932021-12932040 None:intergenic 45.0%
!! GCAGAATTTGCTGAGGAAGA+TGG - chr7.2:12932468-12932487 None:intergenic 45.0%
!! TGGAAGTTGTTGGTGACCTT+GGG - chr7.2:12932412-12932431 None:intergenic 45.0%
ACAAATGCCTCGTGAAGCTC+AGG - chr7.2:12932519-12932538 None:intergenic 50.0%
ACCACAACAACCAAGCCTTG+GGG - chr7.2:12934909-12934928 None:intergenic 50.0%
AGCGAAATGATTGGCAGGAG+TGG + chr7.2:12932150-12932169 MS.gene035191:CDS 50.0%
AGTGAGGAGACTACGACTTG+GGG - chr7.2:12935794-12935813 None:intergenic 50.0%
ATGAGCTTCAGCACACCCTT+AGG - chr7.2:12932669-12932688 None:intergenic 50.0%
CAACCACAACAACCAAGCCT+TGG - chr7.2:12934911-12934930 None:intergenic 50.0%
CATCAGCTACCTTTGCTCTG+AGG - chr7.2:12936254-12936273 None:intergenic 50.0%
CCAACTCTGAATCAGTGGGT+AGG + chr7.2:12934402-12934421 MS.gene035191:intron 50.0%
CCCTTACATGAGGACAGTGA+AGG - chr7.2:12933221-12933240 None:intergenic 50.0%
CCCTTCACTGTCCTCATGTA+AGG + chr7.2:12933217-12933236 MS.gene035191:intron 50.0%
CGGCTGCGAATCAGAAAATC+TGG - chr7.2:12931742-12931761 None:intergenic 50.0%
CTCGGTGGCCATAATATTGC+AGG - chr7.2:12932120-12932139 None:intergenic 50.0%
CTGCAATATTATGGCCACCG+AGG + chr7.2:12932118-12932137 MS.gene035191:CDS 50.0%
CTGGGGTATGTCTCCTCTAA+GGG - chr7.2:12931723-12931742 None:intergenic 50.0%
CTTGTGGTACCTCAGAGCAA+AGG + chr7.2:12936242-12936261 MS.gene035191:intron 50.0%
GAGCGGTGCCTGCAATATTA+TGG + chr7.2:12932109-12932128 MS.gene035191:CDS 50.0%
GAGGCTGTCAATCAACTTGG+TGG + chr7.2:12932540-12932559 MS.gene035191:CDS 50.0%
GCGAAATGATTGGCAGGAGT+GGG + chr7.2:12932151-12932170 MS.gene035191:CDS 50.0%
GGATGGACAGACAACGATGA+AGG - chr7.2:12931696-12931715 None:intergenic 50.0%
GTGGAGGCTGTCAATCAACT+TGG + chr7.2:12932537-12932556 MS.gene035191:CDS 50.0%
GTGTCAGAAGACACTCCAGA+TGG - chr7.2:12936872-12936891 None:intergenic 50.0%
GTTAAGGAGTTGGAGGTCCA+GGG - chr7.2:12935333-12935352 None:intergenic 50.0%
TCGCTTAGAAAACTCCTCGG+TGG - chr7.2:12932135-12932154 None:intergenic 50.0%
TCTACAGGAGCTACCCCTAA+GGG + chr7.2:12932651-12932670 MS.gene035191:intron 50.0%
TGAGCTTCAGCACACCCTTA+GGG - chr7.2:12932668-12932687 None:intergenic 50.0%
TGCAGATGGAGGTCCAGAAA+CGG + chr7.2:12935052-12935071 MS.gene035191:CDS 50.0%
TGCGAATAGAAGAGCAAGGC+AGG + chr7.2:12936768-12936787 MS.gene035191:CDS 50.0%
TGTCCATCCAACACCCTTAG+AGG + chr7.2:12931707-12931726 MS.gene035191:CDS 50.0%
TTCTACAGGAGCTACCCCTA+AGG + chr7.2:12932650-12932669 MS.gene035191:intron 50.0%
TTTGACGCTTAGGGGCTTGA+GGG - chr7.2:12937081-12937100 None:intergenic 50.0%
! GATCAGGTCCTGACTTGCAA+TGG - chr7.2:12936943-12936962 None:intergenic 50.0%
! TCTGGGGTATGTCTCCTCTA+AGG - chr7.2:12931724-12931743 None:intergenic 50.0%
! TGAGCTTCACGAGGCATTTG+TGG + chr7.2:12932518-12932537 MS.gene035191:CDS 50.0%
! TGATTCGCAGCCGACTTATG+TGG + chr7.2:12931749-12931768 MS.gene035191:CDS 50.0%
!! CCTACCCACTGATTCAGAGT+TGG - chr7.2:12934405-12934424 None:intergenic 50.0%
!! CTGGAAGTTGTTGGTGACCT+TGG - chr7.2:12932413-12932432 None:intergenic 50.0%
!! GGCTGTTGCAGAATTTGCTG+AGG - chr7.2:12932475-12932494 None:intergenic 50.0%
!! GTTGTTGGTGACCTTGGGAT+TGG - chr7.2:12932407-12932426 None:intergenic 50.0%
!! TCTCCTCTAAGGGTGTTGGA+TGG - chr7.2:12931713-12931732 None:intergenic 50.0%
ACGGCTGCATGAACAGCTTG+AGG + chr7.2:12935071-12935090 MS.gene035191:CDS 55.0%
ACTAGGAACAGGCCCCAACT+AGG - chr7.2:12934654-12934673 None:intergenic 55.0%
AGCTCTACGACTGCAGATGG+AGG + chr7.2:12935041-12935060 MS.gene035191:CDS 55.0%
AGTCCATCGCATTCGTGGCT+TGG - chr7.2:12932496-12932515 None:intergenic 55.0%
ATGGACTCCTGAGCTTCACG+AGG + chr7.2:12932509-12932528 MS.gene035191:CDS 55.0%
CTCAAGCCCCTAAGCGTCAA+AGG + chr7.2:12937080-12937099 MS.gene035191:CDS 55.0%
CTTTGACGCTTAGGGGCTTG+AGG - chr7.2:12937082-12937101 None:intergenic 55.0%
GAGCTTCAGCACACCCTTAG+GGG - chr7.2:12932667-12932686 None:intergenic 55.0%
GCTGGAAGCAGTTGAGAAGC+TGG + chr7.2:12936997-12937016 MS.gene035191:CDS 55.0%
GCTGTTCATGCAGCCGTTTC+TGG - chr7.2:12935068-12935087 None:intergenic 55.0%
GGAAGCTCTACGACTGCAGA+TGG + chr7.2:12935038-12935057 MS.gene035191:CDS 55.0%
GGGGAGTTGGGTAGCTCAAA+CGG - chr7.2:12935368-12935387 None:intergenic 55.0%
GGTTAAGGAGTTGGAGGTCC+AGG - chr7.2:12935334-12935353 None:intergenic 55.0%
TCAGGAGTCCATCGCATTCG+TGG - chr7.2:12932501-12932520 None:intergenic 55.0%
TCGCTCGTCTCTCTTTGCTG+TGG + chr7.2:12936306-12936325 MS.gene035191:intron 55.0%
! AGCTTTTGGTCCCCAAGGCT+TGG + chr7.2:12934896-12934915 MS.gene035191:intron 55.0%
! GCTTCACGAGGCATTTGTGG+AGG + chr7.2:12932521-12932540 MS.gene035191:CDS 55.0%
! TCCCCAAGGCTTGGTTGTTG+TGG + chr7.2:12934905-12934924 MS.gene035191:intron 55.0%
ACTTGGGGCTGGAGATGCTG+AGG - chr7.2:12935779-12935798 None:intergenic 60.0%
CACGGTTGAGGAAAGCTCGC+TGG + chr7.2:12936979-12936998 MS.gene035191:CDS 60.0%
CAGCCAAGCCACGAATGCGA+TGG + chr7.2:12932490-12932509 MS.gene035191:CDS 60.0%
CAGCGAGCTTTCCTCAACCG+TGG - chr7.2:12936981-12937000 None:intergenic 60.0%
CCAGGGTTCAAGTCCTGGCA+AGG - chr7.2:12935316-12935335 None:intergenic 60.0%
CCTTGCCAGGACTTGAACCC+TGG + chr7.2:12935313-12935332 MS.gene035191:intron 60.0%
GAGGTCCAGGGTTCAAGTCC+TGG - chr7.2:12935321-12935340 None:intergenic 60.0%
GGGTTCAAGTCCTGGCAAGG+AGG - chr7.2:12935313-12935332 None:intergenic 60.0%
TCGGCAGGACACCAATCCCA+AGG + chr7.2:12932393-12932412 MS.gene035191:CDS 60.0%
! AGGAGACTACGACTTGGGGC+TGG - chr7.2:12935790-12935809 None:intergenic 60.0%
! TGCAGGCACCGCTCTCTACT+TGG - chr7.2:12932103-12932122 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 12931615 12937114 12931615 ID=MS.gene035191
chr7.2 mRNA 12931615 12937114 12931615 ID=MS.gene035191.t1;Parent=MS.gene035191
chr7.2 exon 12931615 12932259 12931615 ID=MS.gene035191.t1.exon1;Parent=MS.gene035191.t1
chr7.2 CDS 12931615 12932259 12931615 ID=cds.MS.gene035191.t1;Parent=MS.gene035191.t1
chr7.2 exon 12932357 12932570 12932357 ID=MS.gene035191.t1.exon2;Parent=MS.gene035191.t1
chr7.2 CDS 12932357 12932570 12932357 ID=cds.MS.gene035191.t1;Parent=MS.gene035191.t1
chr7.2 exon 12932658 12932734 12932658 ID=MS.gene035191.t1.exon3;Parent=MS.gene035191.t1
chr7.2 CDS 12932658 12932734 12932658 ID=cds.MS.gene035191.t1;Parent=MS.gene035191.t1
chr7.2 exon 12932815 12932854 12932815 ID=MS.gene035191.t1.exon4;Parent=MS.gene035191.t1
chr7.2 CDS 12932815 12932854 12932815 ID=cds.MS.gene035191.t1;Parent=MS.gene035191.t1
chr7.2 exon 12933594 12933651 12933594 ID=MS.gene035191.t1.exon5;Parent=MS.gene035191.t1
chr7.2 CDS 12933594 12933651 12933594 ID=cds.MS.gene035191.t1;Parent=MS.gene035191.t1
chr7.2 exon 12935023 12935092 12935023 ID=MS.gene035191.t1.exon6;Parent=MS.gene035191.t1
chr7.2 CDS 12935023 12935092 12935023 ID=cds.MS.gene035191.t1;Parent=MS.gene035191.t1
chr7.2 exon 12936749 12937114 12936749 ID=MS.gene035191.t1.exon7;Parent=MS.gene035191.t1
chr7.2 CDS 12936749 12937114 12936749 ID=cds.MS.gene035191.t1;Parent=MS.gene035191.t1
Gene Sequence

>MS.gene035191

ATGGAAGCTCGTCCTGCTTTCTCAATTGAAAGATCAAGTGCCCAGCAACTGAATAACATAGGGATGTCTGGAGCACTTCCTTCATCGTTGTCTGTCCATCCAACACCCTTAGAGGAGACATACCCCAGATTTTCTGATTCGCAGCCGACTTATGTGGAAAAAGATCTTAAGACAAAAACTTTTAATCATTCAAGTCATATAAGTTCTAGTGGAGCAGTTGGGCATATGTTTTCATCTTCCCCTGGATATTCTAACGATCTTCATCACTCATCCCTTTCACCTCATGAAAAACACTCTAGAAGTGCTCATTTTATTTCGCAGTCATTGAGTAACATGGCTTCGGTGCCATTACCGTATTCTTCAAATAATGGACCGGTACCTTCTACAACATCAACACATTATTCCAATGGAAACAGTGCTTCATGGCATGCAGATCCCCTGCCTAGTTTTCTTGATTTCTCTGCAAATGCCTCAATTGATAATAACCAAGTAGAGAGCGGTGCCTGCAATATTATGGCCACCGAGGAGTTTTCTAAGCGAAATGATTGGCAGGAGTGGGCTGACCAGCTAATCAGTGATGACGATACTTTGACTTCTAATTGGAATGATCTTCTTGCTGATAATATTCAAGATCTTGAGCCAAAGGTTAAGGTTTTCATTACTCAAATCAGTATTAGCTTGCAGAGTAAATGAATAGCAATTTATTTAAGAAACATGTTGGGAACTCATTTTGTTTCTTTAGGCGGTGGAATCCATTTCAAAGTCATCTTCACAATTTTCGGCAGGACACCAATCCCAAGGTCACCAACAACTTCCAGCTCTATCTGGAGAAAATCATGTTGGTGTTGCTCCATCTTCCTCAGCAAATTCTGCAACAGCCAAGCCACGAATGCGATGGACTCCTGAGCTTCACGAGGCATTTGTGGAGGCTGTCAATCAACTTGGTGGGAGTGAAAGTATGTCTATCTCTTTCTCACTCCAAAGTAAGATCTTAATTCTTTAAACTTCTGCCTCAATTATTTTTTATGTGCTTCTTTCTACAGGAGCTACCCCTAAGGGTGTGCTGAAGCTCATGAAAGTTGAAGGATTAACTATATATCATGTTAAAAGCCACTTACAGGTATGTACCATTTGCTTTATCTTCCAAGGATTGTTTCCTTGAATGCTTATATTCAAATATGTTGCTTCAACGAAATGCAGAAATACAGGACAGCTAGATATAGACCAGAGTCATCTGAAGGTACATAAGATATGCATTGTATTATAATGCCTTTTGCATGGACAAATTTTTGCATATTAGTTAGGACATAGGATGAGGAGACCATTGGCTATTAAATTTTTACCTGTAAAGTTTGCTGTAGAATTGCCTTTATTAAGTAGATGGCTCTTGTCAGATTTTCTGTTAATTGGAAACTTACTTTGCTCCATATCGAGAAACTTGGAATTTACGTCAAGTATGCTTTTCGAACATGAGAACATATGTAAAAAAGAATTTGAATGGCGCAAGTGTGTGAAGTCTTAAATTGTTGTCTATGGCTCTTAGCCCTTTGTATACAATATTTTGGTTATCTGTTTTCTTAAGACATTTTTTCCTTTCTTTGTCCCTTCACTGTCCTCATGTAAGGGTAAACCATTTTTGAGAAAATGATTTCCATTGAATTTTAACTACTGCGTAATTAGTTGGGAAATTGCTAAATATAAATCATCTCTTTATATGAAATCCGAAGAGAGTCAAAGAGTTTTGGATTTTCAAATAATTAGTTAAGTATTAACTATAATTTCCTTTAGTCTAATCTTTTATTAGATTTGCGTATTGGATATATTATGATACCTAACAGTGAACTTTTTTATTGACCGGGTTTTGTGCATTTGATGTTTCTAAGTAGTGTGTCTTTATTATCTTCCTTGAAATATAGAGTAATGCTCCTTATTTGTGTAATTAATTACATGATTTACAATTTGTTGAATACTGTTGGCAGGAGTTGGAGAGAAAAAACTAAGCCCCATTGAAGATATTTCGTCTCTAGATTTGAAAACGTAAGTGAACTATCGACTTTTATTTGATGCTAACCTCTATTTTGTTATGTATTGTTGTATTTCTAGGAATATTGATACATCAATTTCTTAGACAACATTTTGGTTCTCTAATATGACTTTGCTAATACAAATATTCAAATTTTAAATATCTATATTTGACTTCTTTAAAGGGGGAGATGCATTTTAGAGGGTAAAGTGAAGAGCGATAAATGTTGATTAGAAATAAGAGATTATGATAAAATATATGCATGTGCATTTAAAACGGTAAAGTTGTTAAAATCTAGACCATTTTTTTTCCAATGAACTGTTATAACTTTGCAACAGTAGGTAACATATTTGGTTTTGTTGTAGTGGGTTAGATGAGTAAATTGCACCCCTCTTTAGAGGAGTCATTTCCTAAATGTTTTATATGCTGTTCCCGAGCTTTTACCAACATCTAATCTAATCAATCAATCTAAAGGTAAAAGAGAATGTAGCTTTTGAAACTGGACATGTGGACAGACGTTTTCCATTCATCATTGATGTCGGTCATTTGTTTTGTTTGAAGGGAAAAAGTTGCATGTCCAATTATCCTAGCTAGTAATATCATTCTAGAGATTGACACCAAGTCACTAACACACACAACACTGACATGTAAACTTGCATAGAAATTAGCGCCGTAAAGTTATCTCATCTGCTGGCATTATGAAAGATACTGATTCAGGTATCAAGACTAACCGAAAGAAAATAGAAAATCTTACCCACCATCTTCCAACTCTGAATCAGTGGGTAGGTATCCATGGTCAAGAAGAAAAACGTCTTACAGTGGTATCTTTTCTAGGAATTCAAGAGCCTGAACTGTGTCAAGAACAAAAATATATCTAATAATCAACTAACTGCCTTCTCTTACATTCTATGTCTCTATTTATAAAAGGATGACTAGTAACTACTACAACGACTCTCAACTACTACAACGACTCTCTTGACAAGCCTGCTCTAATTAAAAATGTCTAACTAATTCCTAGTTGGGGCCTGTTCCTAGTAATTATGCATATATCATCTGTTAATCTGATAAGGTAACAGATAAACAAAAAATTATGGGTGTTTTCAAGATTGGATACTATGAGTAAAATGCTAGAAAAGTAGGATTTTAAGATAATCCATCAATAAAGTCTACAGCAAGGTTCTAAGTTATATGGATCAGGAAGGTACTTTTTGATAGCAATGCATCAATGCAGATTAAATATTTTTTATGTCTCTATGTAAGCTTTTGGTCCCCAAGGCTTGGTTGTTGTGGTTGTTGTGTGTAAGCTTTTTGGTCATATTTCATACACAGTAACACAGACATGAATAGTGATTGGTATACTGACTTAACCATTGCATCATTGACAGTGGTATTGAGATCACGGAAGCTCTACGACTGCAGATGGAGGTCCAGAAACGGCTGCATGAACAGCTTGAGGTTTGAATTTATTCTTTTTGTGAATTTTCTTCTGATATGCTCATTTGATTGTTAAAAGATTAGAAATGTGACTTGAAGACTTGTAAGCAAGCTCTATTTTTGTTGCAATTGCCATGACTTTTAGAAATTTATCATCTATAACTTAATGGAATTAGTGTGAATAATCGTTTTTTTTAATGGCAAATGTTAGTATGTTAATTGTTATGGTAGTTTTTTTCCTCCTTGCCAGGACTTGAACCCTGGACCTCCAACTCCTTAACCCTTAACTCAAACCGTTTGAGCTACCCAACTCCCCAACTAGTGTGAATAAAATACTTTTAGGATTTACTCGGATTATCTACTTCAACTGGTGTTTCTGAGCTTAGTGAATAAATTCAAGGAAAATGGAATGAAACTAGCCTGTAAAGGAAGTAGAATAATATTCGGTACTTCTGTTCGTTTTTTAATAAAAAAACGGGTAGTTGTCTAAACACAGTGTCTTAGTGGCAAGGTTATGCTCCCTGTCTCACATTAAGTGATGTTTAAGGTTTTTTCAGAAGAATCTATAAAAGCAATAAATAAGTGGATGGTTGTAACAATTTTACTAAATCATCGTTATTAACTATTGTCCTAAATGCATAGTCAATTTACATAATAGAACTGGCTATTTTGCTTTTGCATTTTAACAAAATAATTTTGAATAGCCTCAGCATCTCCAGCCCCAAGTCGTAGTCTCCTCACTTTATCTATATAGTTTCTACAGTCCTTTTCACCAAATATCATATTCTCATAACCATTTGCTTCAACAAGCAATGATCGAAAATTTCTGCTTACATTTATTCCAGCTTGATCATTGAGTTTTAACCTCCTTTTCAAACTAGGATCCAAAATCTTACTACTTCTAAAATAGCGTGCTTTGCTGGGGCTTATTAGATCATGATTATGCTCAAGAAATATTTTTTTAATAAGTATAATGATTTGAAAGTAATGCACATTTCGTTCATTTGGGGGAGTAACTAAAAAACTTAAAATTAAGTTTTATTGAAAAAATAAAATGTCACTTAATCTGGGAGCATCTTTACAGTTTAATACATGATAAGTTTAACATGCATTACAAAAATATGAACATCTTTGCAGTCATTAGATTAGTGTCATGTATAATTGTAGATACTTGTGGTACCTCAGAGCAAAGGTAGCTGATGTTGATTCTCTTTGTGCACTTATCAATTGAAATTCGCTCGTCTCTCTTTGCTGTGGAGTATGAATTAAAAATGAGATACTAACCATAAAGATAACATTTTGTCAAAAAAAACATCATAAAGATAACATGTTAATTTATAGTTGATGCCCATTCCTTGATTTGTAAAAGAGAATGATCTATCCTCTTCAAGACATTTTTTTTTGCAAAAAATCTAAGCCTTAAATATTTTCTTTTTTCCCCTTCTGGAATCAGGACATTTTTGGATAAACTGATTAGGATTTGTTTGTTTCTTCTTGGGTCATGGAATTAACTTCCGTAATATTGTTTGAAATGTAGCTTTATGCATATGGCATTTAGGGTTATGTTGCTTCTGTCACGTCACATGCATGAACTGTCCAAGGCATTTCACTTGTTCCTCTTATAGTTGTCATGCCTTTTCAGATGATCTGATACAGCTCCCCCCCCTTTTGTGTTAGATTCAAAGAAATCTACAGTTGCGAATAGAAGAGCAAGGCAGGTACCTCCAGATGATGTTTGAGAAGCAATGCAAATCTGGTGTTGAGCCATTTAAGGCATCATCATCAGCCATTGAAAATCCATCTGGAGTGTCTTCTGACACCATGAAAGACTCTCCTACCAAAAATGAATTGGAAGCATCCAAAATGGACCATTGCAAGTCAGGACCTGATCAAGCTAATGGTAGTACCACGGTTGAGGAAAGCTCGCTGGAAGCAGTTGAGAAGCTGGATACCTCCAAATCTCAACAAGCTTCTAAGGATCTTGAGCAAAATGAAAATGAAGATAGCCCTCAAGCCCCTAAGCGTCAAAGGACAGATGAGTAA
Protein sequence

>MS.gene035191.t1

MEARPAFSIERSSAQQLNNIGMSGALPSSLSVHPTPLEETYPRFSDSQPTYVEKDLKTKTFNHSSHISSSGAVGHMFSSSPGYSNDLHHSSLSPHEKHSRSAHFISQSLSNMASVPLPYSSNNGPVPSTTSTHYSNGNSASWHADPLPSFLDFSANASIDNNQVESGACNIMATEEFSKRNDWQEWADQLISDDDTLTSNWNDLLADNIQDLEPKAVESISKSSSQFSAGHQSQGHQQLPALSGENHVGVAPSSSANSATAKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPESSEGVGEKKLSPIEDISSLDLKTGIEITEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKSGVEPFKASSSAIENPSGVSSDTMKDSPTKNELEASKMDHCKSGPDQANGSTTVEESSLEAVEKLDTSKSQQASKDLEQNENEDSPQAPKRQRTDE