Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03529.t1 | XP_013459264.1 | 93.7 | 303 | 19 | 0 | 1 | 303 | 1 | 303 | 5.10E-169 | 603.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03529.t1 | Q9FLJ2 | 56.7 | 337 | 111 | 5 | 1 | 303 | 1 | 336 | 3.3e-100 | 366.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03529.t1 | A0A072V531 | 93.7 | 303 | 19 | 0 | 1 | 303 | 1 | 303 | 3.6e-169 | 603.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene03529.t1 | TF | NAC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03529.t1 | MTR_3g435150 | 93.729 | 303 | 19 | 0 | 1 | 303 | 1 | 303 | 0.0 | 594 |
MS.gene03529.t1 | MTR_4g108760 | 67.183 | 323 | 80 | 7 | 1 | 302 | 1 | 318 | 4.68e-144 | 410 |
MS.gene03529.t1 | MTR_6g012670 | 52.795 | 322 | 128 | 9 | 1 | 303 | 5 | 321 | 8.45e-102 | 301 |
MS.gene03529.t1 | MTR_7g085260 | 66.204 | 216 | 64 | 6 | 1 | 208 | 1 | 215 | 9.41e-92 | 278 |
MS.gene03529.t1 | MTR_6g032770 | 63.285 | 207 | 70 | 5 | 6 | 207 | 8 | 213 | 4.68e-88 | 268 |
MS.gene03529.t1 | MTR_6g084430 | 59.908 | 217 | 80 | 3 | 16 | 231 | 5 | 215 | 9.27e-88 | 265 |
MS.gene03529.t1 | MTR_2g078700 | 64.352 | 216 | 55 | 3 | 16 | 209 | 23 | 238 | 7.08e-87 | 265 |
MS.gene03529.t1 | MTR_7g011130 | 50.649 | 308 | 112 | 9 | 2 | 282 | 5 | 299 | 4.46e-82 | 252 |
MS.gene03529.t1 | MTR_3g070030 | 61.650 | 206 | 75 | 2 | 2 | 203 | 5 | 210 | 4.65e-82 | 252 |
MS.gene03529.t1 | MTR_7g011120 | 61.735 | 196 | 65 | 2 | 10 | 195 | 2 | 197 | 7.35e-77 | 237 |
MS.gene03529.t1 | MTR_3g109340 | 59.223 | 206 | 64 | 5 | 16 | 218 | 22 | 210 | 1.39e-75 | 235 |
MS.gene03529.t1 | MTR_3g109340 | 59.223 | 206 | 65 | 6 | 16 | 218 | 22 | 211 | 3.41e-74 | 232 |
MS.gene03529.t1 | MTR_1g008740 | 65.060 | 166 | 52 | 3 | 10 | 172 | 7 | 169 | 6.38e-74 | 231 |
MS.gene03529.t1 | MTR_1g008740 | 62.069 | 174 | 60 | 3 | 2 | 172 | 13 | 183 | 9.89e-74 | 231 |
MS.gene03529.t1 | MTR_3g070040 | 57.286 | 199 | 77 | 4 | 10 | 203 | 2 | 197 | 1.03e-67 | 214 |
MS.gene03529.t1 | MTR_3g116070 | 57.923 | 183 | 63 | 5 | 6 | 174 | 8 | 190 | 8.44e-63 | 202 |
MS.gene03529.t1 | MTR_2g064470 | 48.945 | 237 | 90 | 8 | 1 | 222 | 1 | 221 | 1.04e-62 | 201 |
MS.gene03529.t1 | MTR_4g101680 | 60.127 | 158 | 54 | 3 | 16 | 169 | 7 | 159 | 1.29e-59 | 194 |
MS.gene03529.t1 | MTR_5g021710 | 48.768 | 203 | 95 | 4 | 16 | 213 | 8 | 206 | 2.18e-59 | 194 |
MS.gene03529.t1 | MTR_4g036030 | 57.962 | 157 | 59 | 3 | 16 | 169 | 7 | 159 | 4.29e-59 | 192 |
MS.gene03529.t1 | MTR_2g079990 | 55.689 | 167 | 72 | 1 | 13 | 179 | 13 | 177 | 1.65e-58 | 191 |
MS.gene03529.t1 | MTR_8g076110 | 56.688 | 157 | 61 | 3 | 16 | 169 | 6 | 158 | 1.85e-58 | 190 |
MS.gene03529.t1 | MTR_4g035590 | 61.688 | 154 | 51 | 3 | 16 | 166 | 8 | 156 | 3.42e-58 | 191 |
MS.gene03529.t1 | MTR_8g059170 | 48.058 | 206 | 96 | 2 | 13 | 209 | 11 | 214 | 5.08e-58 | 189 |
MS.gene03529.t1 | MTR_5g012080 | 57.595 | 158 | 60 | 3 | 16 | 169 | 7 | 161 | 7.96e-58 | 189 |
MS.gene03529.t1 | MTR_7g085220 | 43.210 | 243 | 121 | 5 | 13 | 239 | 5 | 246 | 3.30e-57 | 187 |
MS.gene03529.t1 | MTR_8g024480 | 53.714 | 175 | 69 | 4 | 2 | 166 | 3 | 175 | 5.43e-57 | 189 |
MS.gene03529.t1 | MTR_2g062730 | 56.329 | 158 | 61 | 3 | 13 | 166 | 7 | 160 | 7.95e-57 | 187 |
MS.gene03529.t1 | MTR_1g069805 | 44.796 | 221 | 90 | 6 | 16 | 234 | 10 | 200 | 1.11e-56 | 184 |
MS.gene03529.t1 | MTR_2157s0010 | 50.785 | 191 | 79 | 6 | 16 | 192 | 8 | 197 | 2.40e-56 | 183 |
MS.gene03529.t1 | MTR_4g081870 | 55.063 | 158 | 69 | 1 | 16 | 171 | 9 | 166 | 5.96e-56 | 182 |
MS.gene03529.t1 | MTR_2g064090 | 56.051 | 157 | 66 | 2 | 14 | 168 | 4 | 159 | 1.23e-55 | 184 |
MS.gene03529.t1 | MTR_5g041940 | 55.484 | 155 | 67 | 1 | 14 | 166 | 1 | 155 | 1.37e-55 | 181 |
MS.gene03529.t1 | MTR_1g096430 | 55.195 | 154 | 62 | 3 | 16 | 166 | 7 | 156 | 3.23e-55 | 182 |
MS.gene03529.t1 | MTR_3g088110 | 50.847 | 177 | 75 | 3 | 13 | 178 | 4 | 179 | 1.50e-54 | 179 |
MS.gene03529.t1 | MTR_7g100990 | 56.329 | 158 | 65 | 3 | 13 | 166 | 8 | 165 | 1.71e-54 | 180 |
MS.gene03529.t1 | MTR_2g080010 | 52.410 | 166 | 66 | 3 | 13 | 166 | 12 | 176 | 7.18e-54 | 179 |
MS.gene03529.t1 | MTR_7g097090 | 46.890 | 209 | 99 | 6 | 16 | 219 | 10 | 211 | 7.83e-54 | 177 |
MS.gene03529.t1 | MTR_2g079990 | 47.668 | 193 | 75 | 2 | 13 | 179 | 13 | 205 | 8.67e-54 | 180 |
MS.gene03529.t1 | MTR_7g005280 | 50.000 | 176 | 79 | 4 | 7 | 180 | 6 | 174 | 3.88e-53 | 174 |
MS.gene03529.t1 | MTR_8g094580 | 44.954 | 218 | 100 | 4 | 16 | 214 | 7 | 223 | 6.12e-53 | 175 |
MS.gene03529.t1 | MTR_6g477900 | 54.545 | 154 | 66 | 2 | 16 | 167 | 6 | 157 | 2.10e-52 | 172 |
MS.gene03529.t1 | MTR_4g089135 | 50.282 | 177 | 65 | 4 | 16 | 169 | 15 | 191 | 2.29e-52 | 175 |
MS.gene03529.t1 | MTR_8g467490 | 50.000 | 168 | 74 | 3 | 8 | 166 | 7 | 173 | 2.90e-52 | 176 |
MS.gene03529.t1 | MTR_3g064580 | 56.209 | 153 | 64 | 2 | 16 | 166 | 6 | 157 | 1.10e-51 | 180 |
MS.gene03529.t1 | MTR_5g040420 | 50.556 | 180 | 78 | 5 | 12 | 181 | 11 | 189 | 4.17e-51 | 173 |
MS.gene03529.t1 | MTR_5g076850 | 54.902 | 153 | 65 | 3 | 16 | 166 | 6 | 156 | 6.53e-51 | 177 |
MS.gene03529.t1 | MTR_3g096920 | 48.000 | 175 | 89 | 2 | 11 | 184 | 2 | 175 | 7.23e-51 | 170 |
MS.gene03529.t1 | MTR_2g093810 | 51.875 | 160 | 73 | 3 | 16 | 171 | 14 | 173 | 5.72e-50 | 168 |
MS.gene03529.t1 | MTR_5g014300 | 46.774 | 186 | 83 | 4 | 16 | 192 | 6 | 184 | 7.11e-50 | 168 |
MS.gene03529.t1 | MTR_6g011860 | 50.943 | 159 | 70 | 2 | 16 | 166 | 15 | 173 | 1.14e-49 | 169 |
MS.gene03529.t1 | MTR_3g096140 | 50.932 | 161 | 73 | 3 | 15 | 172 | 6 | 163 | 4.36e-49 | 165 |
MS.gene03529.t1 | MTR_4g098630 | 47.541 | 183 | 86 | 4 | 16 | 190 | 6 | 186 | 4.89e-49 | 166 |
MS.gene03529.t1 | MTR_3g093050 | 44.286 | 210 | 105 | 3 | 16 | 223 | 22 | 221 | 2.10e-48 | 170 |
MS.gene03529.t1 | MTR_3g096140 | 50.932 | 161 | 73 | 3 | 15 | 172 | 6 | 163 | 2.42e-48 | 165 |
MS.gene03529.t1 | MTR_3g093050 | 44.286 | 210 | 105 | 3 | 16 | 223 | 22 | 221 | 3.42e-48 | 170 |
MS.gene03529.t1 | MTR_1g090723 | 44.240 | 217 | 109 | 7 | 10 | 219 | 2 | 213 | 9.23e-48 | 169 |
MS.gene03529.t1 | MTR_3g096920 | 58.779 | 131 | 53 | 1 | 11 | 141 | 2 | 131 | 1.27e-47 | 162 |
MS.gene03529.t1 | MTR_3g093040 | 51.948 | 154 | 70 | 2 | 16 | 167 | 108 | 259 | 1.42e-47 | 162 |
MS.gene03529.t1 | MTR_1g090723 | 43.981 | 216 | 110 | 7 | 10 | 219 | 2 | 212 | 1.54e-47 | 168 |
MS.gene03529.t1 | MTR_1g090723 | 43.981 | 216 | 110 | 7 | 10 | 219 | 2 | 212 | 1.86e-47 | 168 |
MS.gene03529.t1 | MTR_5g090970 | 37.591 | 274 | 143 | 10 | 9 | 261 | 12 | 278 | 5.65e-47 | 160 |
MS.gene03529.t1 | MTR_5g069030 | 53.165 | 158 | 60 | 3 | 16 | 166 | 25 | 175 | 1.16e-46 | 166 |
MS.gene03529.t1 | MTR_8g063550 | 48.447 | 161 | 75 | 3 | 16 | 172 | 6 | 162 | 4.17e-46 | 159 |
MS.gene03529.t1 | MTR_1g090720 | 52.795 | 161 | 70 | 2 | 16 | 170 | 42 | 202 | 4.21e-46 | 162 |
MS.gene03529.t1 | MTR_0036s0150 | 53.416 | 161 | 63 | 5 | 18 | 172 | 7 | 161 | 5.37e-46 | 163 |
MS.gene03529.t1 | MTR_8g063550 | 48.447 | 161 | 75 | 3 | 16 | 172 | 6 | 162 | 8.05e-46 | 160 |
MS.gene03529.t1 | MTR_5g090970 | 37.591 | 274 | 142 | 11 | 9 | 261 | 12 | 277 | 1.07e-45 | 157 |
MS.gene03529.t1 | MTR_8g063550 | 48.447 | 161 | 75 | 3 | 16 | 172 | 6 | 162 | 1.21e-45 | 160 |
MS.gene03529.t1 | MTR_2g068880 | 44.444 | 189 | 85 | 6 | 1 | 173 | 9 | 193 | 7.35e-45 | 155 |
MS.gene03529.t1 | MTR_8g093580 | 47.170 | 159 | 80 | 2 | 16 | 172 | 6 | 162 | 3.41e-44 | 157 |
MS.gene03529.t1 | MTR_4g075980 | 46.552 | 174 | 79 | 5 | 1 | 171 | 4 | 166 | 6.14e-44 | 152 |
MS.gene03529.t1 | MTR_4g134460 | 48.077 | 156 | 70 | 3 | 15 | 166 | 53 | 201 | 8.10e-44 | 155 |
MS.gene03529.t1 | MTR_1g097300 | 48.408 | 157 | 77 | 2 | 18 | 172 | 21 | 175 | 9.03e-44 | 157 |
MS.gene03529.t1 | MTR_2g086880 | 41.709 | 199 | 91 | 5 | 4 | 196 | 1 | 180 | 1.04e-43 | 156 |
MS.gene03529.t1 | MTR_2g068920 | 40.488 | 205 | 99 | 6 | 1 | 190 | 9 | 205 | 2.18e-43 | 150 |
MS.gene03529.t1 | MTR_2g086880 | 41.709 | 199 | 91 | 5 | 4 | 196 | 1 | 180 | 2.81e-43 | 156 |
MS.gene03529.t1 | MTR_3g096140 | 49.306 | 144 | 67 | 3 | 32 | 172 | 2 | 142 | 1.11e-38 | 139 |
MS.gene03529.t1 | MTR_8g099750 | 43.125 | 160 | 84 | 3 | 16 | 170 | 14 | 171 | 1.58e-38 | 135 |
MS.gene03529.t1 | MTR_3g098810 | 42.593 | 162 | 83 | 4 | 16 | 169 | 14 | 173 | 2.49e-37 | 133 |
MS.gene03529.t1 | MTR_8g023840 | 55.039 | 129 | 52 | 5 | 16 | 139 | 11 | 138 | 5.87e-37 | 136 |
MS.gene03529.t1 | MTR_3g098810 | 45.385 | 130 | 65 | 2 | 16 | 141 | 14 | 141 | 4.75e-35 | 125 |
MS.gene03529.t1 | MTR_4g052620 | 42.500 | 160 | 79 | 5 | 15 | 164 | 4 | 160 | 3.11e-34 | 125 |
MS.gene03529.t1 | MTR_8g023860 | 46.104 | 154 | 70 | 7 | 16 | 164 | 12 | 157 | 1.15e-33 | 127 |
MS.gene03529.t1 | MTR_8g094580 | 41.143 | 175 | 83 | 4 | 65 | 220 | 2 | 175 | 2.59e-32 | 120 |
MS.gene03529.t1 | MTR_2g086690 | 40.252 | 159 | 81 | 5 | 17 | 164 | 5 | 160 | 4.86e-32 | 119 |
MS.gene03529.t1 | MTR_8g023900 | 42.949 | 156 | 78 | 6 | 16 | 166 | 12 | 161 | 5.02e-31 | 121 |
MS.gene03529.t1 | MTR_8g023900 | 39.444 | 180 | 86 | 10 | 2 | 166 | 169 | 340 | 4.32e-29 | 115 |
MS.gene03529.t1 | MTR_8g023930 | 41.026 | 156 | 79 | 7 | 16 | 166 | 24 | 171 | 1.74e-29 | 117 |
MS.gene03529.t1 | MTR_7g105170 | 39.877 | 163 | 86 | 6 | 16 | 167 | 4 | 165 | 2.81e-29 | 112 |
MS.gene03529.t1 | MTR_4g094302 | 36.709 | 158 | 86 | 3 | 16 | 167 | 11 | 160 | 8.69e-29 | 109 |
MS.gene03529.t1 | MTR_8g023880 | 42.941 | 170 | 66 | 9 | 16 | 166 | 7 | 164 | 1.15e-28 | 111 |
MS.gene03529.t1 | MTR_4g094302 | 39.844 | 128 | 67 | 2 | 16 | 141 | 11 | 130 | 6.20e-27 | 103 |
MS.gene03529.t1 | MTR_8g093790 | 37.647 | 170 | 80 | 6 | 11 | 176 | 5 | 152 | 2.17e-25 | 100 |
MS.gene03529.t1 | MTR_7g070140 | 47.727 | 88 | 42 | 2 | 63 | 146 | 9 | 96 | 2.17e-22 | 90.9 |
MS.gene03529.t1 | MTR_3g096400 | 35.556 | 180 | 95 | 7 | 12 | 176 | 3 | 176 | 3.86e-21 | 89.7 |
MS.gene03529.t1 | MTR_7g083360 | 32.283 | 127 | 80 | 5 | 16 | 139 | 10 | 133 | 2.82e-16 | 75.1 |
MS.gene03529.t1 | MTR_7g083330 | 33.333 | 132 | 82 | 5 | 11 | 139 | 13 | 141 | 4.92e-16 | 75.5 |
MS.gene03529.t1 | MTR_4g078875 | 35.664 | 143 | 74 | 4 | 16 | 141 | 48 | 189 | 4.97e-15 | 74.3 |
MS.gene03529.t1 | MTR_7g070150 | 45.161 | 62 | 29 | 1 | 108 | 169 | 4 | 60 | 4.56e-12 | 61.6 |
MS.gene03529.t1 | MTR_8g102240 | 33.766 | 154 | 76 | 5 | 12 | 141 | 43 | 194 | 4.55e-11 | 63.5 |
MS.gene03529.t1 | MTR_8g102240 | 33.766 | 154 | 76 | 5 | 12 | 141 | 43 | 194 | 4.55e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene03529.t1 | AT5G61430 | 56.677 | 337 | 111 | 5 | 1 | 303 | 1 | 336 | 1.14e-126 | 365 |
MS.gene03529.t1 | AT5G07680 | 55.132 | 341 | 103 | 9 | 1 | 303 | 1 | 329 | 7.79e-118 | 342 |
MS.gene03529.t1 | AT5G07680 | 55.352 | 327 | 97 | 8 | 14 | 303 | 1 | 315 | 1.91e-114 | 333 |
MS.gene03529.t1 | AT5G39610 | 68.224 | 214 | 65 | 1 | 4 | 217 | 8 | 218 | 2.57e-100 | 296 |
MS.gene03529.t1 | AT3G29035 | 70.256 | 195 | 44 | 1 | 8 | 202 | 16 | 196 | 3.91e-93 | 279 |
MS.gene03529.t1 | AT3G04060 | 66.176 | 204 | 62 | 4 | 2 | 198 | 4 | 207 | 3.59e-90 | 272 |
MS.gene03529.t1 | AT5G18270 | 57.200 | 250 | 91 | 4 | 11 | 244 | 16 | 265 | 7.37e-90 | 271 |
MS.gene03529.t1 | AT5G18270 | 56.800 | 250 | 92 | 4 | 11 | 244 | 16 | 265 | 4.83e-89 | 269 |
MS.gene03529.t1 | AT5G61430 | 52.747 | 273 | 94 | 5 | 65 | 303 | 2 | 273 | 1.02e-88 | 266 |
MS.gene03529.t1 | AT3G15170 | 59.111 | 225 | 80 | 4 | 11 | 230 | 15 | 232 | 2.80e-86 | 261 |
MS.gene03529.t1 | AT5G53950 | 77.215 | 158 | 34 | 1 | 12 | 167 | 13 | 170 | 9.51e-86 | 262 |
MS.gene03529.t1 | AT3G18400 | 75.949 | 158 | 35 | 2 | 16 | 173 | 5 | 159 | 3.02e-84 | 256 |
MS.gene03529.t1 | AT2G24430 | 68.675 | 166 | 45 | 4 | 9 | 172 | 11 | 171 | 4.29e-75 | 233 |
MS.gene03529.t1 | AT2G24430 | 68.675 | 166 | 45 | 4 | 9 | 172 | 11 | 171 | 4.29e-75 | 233 |
MS.gene03529.t1 | AT1G76420 | 66.250 | 160 | 49 | 2 | 9 | 166 | 15 | 171 | 1.41e-69 | 219 |
MS.gene03529.t1 | AT3G12977 | 47.619 | 210 | 100 | 3 | 16 | 224 | 18 | 218 | 5.52e-67 | 211 |
MS.gene03529.t1 | AT1G56010 | 49.554 | 224 | 91 | 8 | 16 | 224 | 19 | 235 | 4.00e-63 | 202 |
MS.gene03529.t1 | AT1G12260 | 58.861 | 158 | 58 | 3 | 16 | 170 | 7 | 160 | 1.52e-59 | 194 |
MS.gene03529.t1 | AT1G12260 | 58.861 | 158 | 58 | 3 | 16 | 170 | 7 | 160 | 2.08e-59 | 195 |
MS.gene03529.t1 | AT2G18060 | 56.604 | 159 | 62 | 3 | 16 | 171 | 9 | 163 | 7.73e-59 | 192 |
MS.gene03529.t1 | AT2G18060 | 56.604 | 159 | 62 | 3 | 16 | 171 | 9 | 163 | 7.73e-59 | 192 |
MS.gene03529.t1 | AT1G62700 | 59.494 | 158 | 57 | 3 | 16 | 170 | 7 | 160 | 1.33e-58 | 193 |
MS.gene03529.t1 | AT1G62700 | 59.494 | 158 | 57 | 3 | 16 | 170 | 7 | 160 | 1.33e-58 | 193 |
MS.gene03529.t1 | AT3G61910 | 44.094 | 254 | 117 | 7 | 3 | 235 | 2 | 251 | 6.36e-58 | 189 |
MS.gene03529.t1 | AT4G10350 | 59.236 | 157 | 58 | 3 | 16 | 168 | 9 | 163 | 1.09e-57 | 189 |
MS.gene03529.t1 | AT5G62380 | 54.857 | 175 | 72 | 4 | 16 | 187 | 7 | 177 | 1.22e-57 | 189 |
MS.gene03529.t1 | AT5G62380 | 54.857 | 175 | 72 | 4 | 16 | 187 | 7 | 177 | 1.22e-57 | 189 |
MS.gene03529.t1 | AT4G27410 | 52.941 | 170 | 75 | 2 | 8 | 174 | 3 | 170 | 1.38e-57 | 187 |
MS.gene03529.t1 | AT4G36160 | 54.438 | 169 | 64 | 4 | 1 | 166 | 5 | 163 | 1.69e-57 | 189 |
MS.gene03529.t1 | AT4G36160 | 54.438 | 169 | 64 | 4 | 1 | 166 | 1 | 159 | 1.89e-57 | 189 |
MS.gene03529.t1 | AT4G36160 | 54.438 | 169 | 64 | 4 | 1 | 166 | 1 | 159 | 1.89e-57 | 189 |
MS.gene03529.t1 | AT1G71930 | 50.307 | 163 | 74 | 2 | 13 | 172 | 6 | 164 | 2.45e-57 | 187 |
MS.gene03529.t1 | AT1G71930 | 50.307 | 163 | 74 | 2 | 13 | 172 | 6 | 164 | 2.45e-57 | 187 |
MS.gene03529.t1 | AT2G46770 | 54.167 | 168 | 63 | 3 | 13 | 166 | 13 | 180 | 4.97e-57 | 188 |
MS.gene03529.t1 | AT3G15500 | 54.491 | 167 | 74 | 2 | 13 | 179 | 11 | 175 | 2.85e-56 | 184 |
MS.gene03529.t1 | AT3G04070 | 44.082 | 245 | 111 | 8 | 16 | 242 | 10 | 246 | 3.06e-56 | 185 |
MS.gene03529.t1 | AT1G33280 | 57.143 | 154 | 58 | 2 | 16 | 166 | 8 | 156 | 3.86e-56 | 184 |
MS.gene03529.t1 | AT1G61110 | 48.691 | 191 | 87 | 3 | 1 | 180 | 1 | 191 | 4.06e-56 | 184 |
MS.gene03529.t1 | AT5G66300 | 56.329 | 158 | 61 | 4 | 16 | 169 | 12 | 165 | 7.95e-56 | 182 |
MS.gene03529.t1 | AT1G52890 | 52.273 | 176 | 79 | 3 | 13 | 186 | 11 | 183 | 1.10e-55 | 183 |
MS.gene03529.t1 | AT3G10500 | 56.522 | 161 | 62 | 3 | 16 | 172 | 9 | 165 | 1.45e-55 | 189 |
MS.gene03529.t1 | AT5G04410 | 56.875 | 160 | 63 | 3 | 16 | 172 | 9 | 165 | 1.96e-55 | 189 |
MS.gene03529.t1 | AT3G17730 | 55.195 | 154 | 65 | 2 | 16 | 167 | 6 | 157 | 1.62e-54 | 177 |
MS.gene03529.t1 | AT1G69490 | 54.037 | 161 | 72 | 1 | 13 | 171 | 6 | 166 | 2.25e-54 | 178 |
MS.gene03529.t1 | AT3G10490 | 56.051 | 157 | 66 | 2 | 16 | 170 | 27 | 182 | 1.00e-53 | 175 |
MS.gene03529.t1 | AT3G04070 | 41.379 | 261 | 111 | 8 | 16 | 242 | 10 | 262 | 1.14e-53 | 179 |
MS.gene03529.t1 | AT4G35580 | 47.475 | 198 | 93 | 4 | 16 | 206 | 9 | 202 | 1.69e-53 | 182 |
MS.gene03529.t1 | AT3G10480 | 57.325 | 157 | 64 | 2 | 16 | 170 | 27 | 182 | 1.72e-53 | 181 |
MS.gene03529.t1 | AT4G35580 | 47.475 | 198 | 93 | 4 | 16 | 206 | 9 | 202 | 2.09e-53 | 182 |
MS.gene03529.t1 | AT4G35580 | 47.475 | 198 | 93 | 4 | 16 | 206 | 9 | 202 | 2.14e-53 | 182 |
MS.gene03529.t1 | AT5G46590 | 55.484 | 155 | 65 | 3 | 16 | 167 | 6 | 159 | 2.52e-53 | 176 |
MS.gene03529.t1 | AT1G01720 | 55.484 | 155 | 66 | 3 | 14 | 166 | 5 | 158 | 2.88e-53 | 176 |
MS.gene03529.t1 | AT1G32770 | 53.939 | 165 | 65 | 3 | 13 | 166 | 13 | 177 | 5.16e-53 | 177 |
MS.gene03529.t1 | AT4G27410 | 49.718 | 177 | 70 | 2 | 13 | 172 | 11 | 185 | 5.61e-53 | 176 |
MS.gene03529.t1 | AT1G79580 | 55.063 | 158 | 62 | 3 | 13 | 166 | 14 | 166 | 6.38e-53 | 177 |
MS.gene03529.t1 | AT1G79580 | 55.063 | 158 | 62 | 3 | 13 | 166 | 14 | 166 | 6.38e-53 | 177 |
MS.gene03529.t1 | AT1G79580 | 55.063 | 158 | 62 | 3 | 13 | 166 | 14 | 166 | 6.38e-53 | 177 |
MS.gene03529.t1 | AT1G79580 | 55.063 | 158 | 62 | 3 | 13 | 166 | 14 | 166 | 6.38e-53 | 177 |
MS.gene03529.t1 | AT1G79580 | 55.063 | 158 | 62 | 3 | 13 | 166 | 14 | 166 | 6.38e-53 | 177 |
MS.gene03529.t1 | AT3G10480 | 57.962 | 157 | 62 | 2 | 16 | 170 | 27 | 181 | 6.94e-53 | 179 |
MS.gene03529.t1 | AT2G33480 | 53.988 | 163 | 64 | 3 | 9 | 169 | 8 | 161 | 9.89e-53 | 174 |
MS.gene03529.t1 | AT1G33060 | 55.556 | 153 | 64 | 2 | 16 | 166 | 24 | 174 | 1.04e-52 | 182 |
MS.gene03529.t1 | AT3G03200 | 55.128 | 156 | 61 | 3 | 16 | 166 | 6 | 157 | 1.05e-52 | 179 |
MS.gene03529.t1 | AT1G33060 | 55.556 | 153 | 64 | 2 | 16 | 166 | 24 | 174 | 1.11e-52 | 182 |
MS.gene03529.t1 | AT1G54330 | 57.962 | 157 | 59 | 2 | 14 | 168 | 4 | 155 | 1.19e-52 | 174 |
MS.gene03529.t1 | AT3G10490 | 56.051 | 157 | 66 | 2 | 16 | 170 | 27 | 182 | 2.29e-52 | 178 |
MS.gene03529.t1 | AT2G33480 | 53.374 | 163 | 67 | 3 | 9 | 169 | 8 | 163 | 5.54e-52 | 172 |
MS.gene03529.t1 | AT5G46590 | 61.240 | 129 | 47 | 2 | 16 | 141 | 6 | 134 | 5.77e-52 | 172 |
MS.gene03529.t1 | AT4G28530 | 51.479 | 169 | 58 | 4 | 16 | 166 | 10 | 172 | 1.74e-51 | 173 |
MS.gene03529.t1 | AT5G08790 | 50.888 | 169 | 67 | 3 | 13 | 172 | 4 | 165 | 2.07e-51 | 171 |
MS.gene03529.t1 | AT1G77450 | 52.174 | 161 | 75 | 2 | 7 | 166 | 1 | 160 | 2.64e-51 | 170 |
MS.gene03529.t1 | AT1G65910 | 52.830 | 159 | 71 | 2 | 16 | 172 | 6 | 162 | 5.53e-51 | 178 |
MS.gene03529.t1 | AT1G26870 | 45.283 | 212 | 95 | 5 | 9 | 211 | 11 | 210 | 8.61e-51 | 173 |
MS.gene03529.t1 | AT5G13180 | 48.851 | 174 | 79 | 4 | 1 | 172 | 1 | 166 | 1.43e-50 | 168 |
MS.gene03529.t1 | AT5G17260 | 53.846 | 156 | 63 | 3 | 16 | 166 | 6 | 157 | 2.48e-50 | 173 |
MS.gene03529.t1 | AT3G15510 | 52.795 | 161 | 61 | 4 | 20 | 167 | 21 | 179 | 1.01e-49 | 169 |
MS.gene03529.t1 | AT4G17980 | 46.561 | 189 | 97 | 2 | 16 | 200 | 6 | 194 | 1.17e-49 | 166 |
MS.gene03529.t1 | AT4G17980 | 46.561 | 189 | 97 | 2 | 16 | 200 | 6 | 194 | 1.29e-49 | 166 |
MS.gene03529.t1 | AT2G43000 | 46.154 | 169 | 89 | 2 | 3 | 171 | 6 | 172 | 3.58e-49 | 165 |
MS.gene03529.t1 | AT5G63790 | 50.299 | 167 | 79 | 2 | 9 | 172 | 43 | 208 | 4.58e-49 | 166 |
MS.gene03529.t1 | AT5G39820 | 47.727 | 176 | 70 | 4 | 12 | 166 | 17 | 191 | 4.59e-49 | 166 |
MS.gene03529.t1 | AT5G63790 | 51.553 | 161 | 74 | 2 | 9 | 166 | 53 | 212 | 5.49e-49 | 166 |
MS.gene03529.t1 | AT3G10480 | 47.368 | 190 | 64 | 2 | 16 | 170 | 27 | 215 | 1.37e-47 | 167 |
MS.gene03529.t1 | AT5G24590 | 45.274 | 201 | 95 | 5 | 16 | 213 | 13 | 201 | 2.18e-47 | 165 |
MS.gene03529.t1 | AT5G64060 | 47.500 | 160 | 78 | 3 | 16 | 172 | 6 | 162 | 5.09e-47 | 162 |
MS.gene03529.t1 | AT3G49530 | 49.112 | 169 | 75 | 5 | 2 | 166 | 3 | 164 | 7.52e-47 | 162 |
MS.gene03529.t1 | AT3G12977 | 47.205 | 161 | 75 | 3 | 65 | 224 | 14 | 165 | 9.85e-47 | 157 |
MS.gene03529.t1 | AT3G49530 | 49.112 | 169 | 75 | 5 | 2 | 166 | 3 | 164 | 3.13e-46 | 162 |
MS.gene03529.t1 | AT5G09330 | 47.500 | 160 | 78 | 3 | 16 | 172 | 6 | 162 | 3.45e-46 | 162 |
MS.gene03529.t1 | AT5G09330 | 47.500 | 160 | 78 | 3 | 16 | 172 | 6 | 162 | 3.45e-46 | 162 |
MS.gene03529.t1 | AT5G09330 | 47.500 | 160 | 78 | 3 | 16 | 172 | 6 | 162 | 3.45e-46 | 162 |
MS.gene03529.t1 | AT5G09330 | 47.500 | 160 | 78 | 3 | 16 | 172 | 6 | 162 | 3.45e-46 | 162 |
MS.gene03529.t1 | AT5G09330 | 47.500 | 160 | 78 | 3 | 16 | 172 | 6 | 162 | 3.45e-46 | 162 |
MS.gene03529.t1 | AT2G02450 | 49.673 | 153 | 72 | 2 | 15 | 166 | 50 | 198 | 9.57e-46 | 160 |
MS.gene03529.t1 | AT2G02450 | 49.673 | 153 | 72 | 2 | 15 | 166 | 50 | 198 | 9.88e-46 | 159 |
MS.gene03529.t1 | AT1G52880 | 51.250 | 160 | 68 | 3 | 20 | 169 | 21 | 180 | 1.34e-45 | 157 |
MS.gene03529.t1 | AT2G27300 | 49.669 | 151 | 66 | 3 | 16 | 165 | 14 | 155 | 5.80e-45 | 155 |
MS.gene03529.t1 | AT1G56010 | 49.425 | 174 | 67 | 7 | 65 | 224 | 2 | 168 | 2.53e-44 | 152 |
MS.gene03529.t1 | AT1G32510 | 46.471 | 170 | 79 | 4 | 15 | 174 | 5 | 172 | 7.21e-44 | 151 |
MS.gene03529.t1 | AT2G17040 | 47.134 | 157 | 73 | 3 | 18 | 171 | 8 | 157 | 1.59e-43 | 150 |
MS.gene03529.t1 | AT3G12910 | 45.000 | 180 | 82 | 6 | 8 | 172 | 14 | 191 | 2.92e-43 | 150 |
MS.gene03529.t1 | AT1G34180 | 33.762 | 311 | 157 | 11 | 18 | 295 | 18 | 312 | 3.18e-43 | 154 |
MS.gene03529.t1 | AT1G34190 | 46.497 | 157 | 80 | 2 | 18 | 172 | 18 | 172 | 9.69e-43 | 154 |
MS.gene03529.t1 | AT1G34180 | 33.762 | 311 | 157 | 11 | 18 | 295 | 18 | 312 | 1.12e-42 | 154 |
MS.gene03529.t1 | AT5G22290 | 46.939 | 147 | 69 | 2 | 18 | 163 | 23 | 161 | 2.39e-42 | 149 |
MS.gene03529.t1 | AT1G34180 | 32.817 | 323 | 156 | 12 | 18 | 295 | 18 | 324 | 1.24e-41 | 150 |
MS.gene03529.t1 | AT3G44290 | 48.980 | 147 | 65 | 3 | 18 | 163 | 16 | 153 | 1.73e-41 | 144 |
MS.gene03529.t1 | AT1G34180 | 32.817 | 323 | 156 | 12 | 18 | 295 | 18 | 324 | 5.72e-41 | 150 |
MS.gene03529.t1 | AT1G32870 | 49.686 | 159 | 76 | 2 | 16 | 172 | 10 | 166 | 6.67e-41 | 149 |
MS.gene03529.t1 | AT1G32870 | 49.686 | 159 | 76 | 2 | 16 | 172 | 10 | 166 | 7.06e-41 | 149 |
MS.gene03529.t1 | AT3G44290 | 51.969 | 127 | 60 | 1 | 18 | 143 | 16 | 142 | 7.90e-41 | 145 |
MS.gene03529.t1 | AT1G32870 | 49.686 | 159 | 76 | 2 | 16 | 172 | 46 | 202 | 1.37e-40 | 149 |
MS.gene03529.t1 | AT5G04395 | 50.000 | 142 | 55 | 2 | 16 | 141 | 28 | 169 | 6.32e-38 | 133 |
MS.gene03529.t1 | AT4G10350 | 57.143 | 112 | 42 | 3 | 61 | 168 | 7 | 116 | 4.22e-35 | 129 |
MS.gene03529.t1 | AT2G33480 | 55.340 | 103 | 40 | 2 | 69 | 169 | 8 | 106 | 7.46e-31 | 115 |
MS.gene03529.t1 | AT4G28530 | 47.656 | 128 | 49 | 2 | 16 | 125 | 10 | 137 | 9.20e-31 | 118 |
MS.gene03529.t1 | AT3G04420 | 40.260 | 154 | 81 | 4 | 17 | 166 | 4 | 150 | 4.02e-29 | 113 |
MS.gene03529.t1 | AT3G04420 | 40.260 | 154 | 81 | 4 | 17 | 166 | 4 | 150 | 1.80e-28 | 112 |
MS.gene03529.t1 | AT4G01550 | 41.139 | 158 | 80 | 6 | 19 | 170 | 7 | 157 | 4.67e-28 | 113 |
MS.gene03529.t1 | AT5G64530 | 36.416 | 173 | 84 | 4 | 14 | 172 | 1 | 161 | 3.46e-27 | 105 |
MS.gene03529.t1 | AT1G02230 | 42.446 | 139 | 70 | 5 | 14 | 145 | 1 | 136 | 3.90e-27 | 108 |
MS.gene03529.t1 | AT3G44350 | 37.037 | 162 | 95 | 4 | 16 | 171 | 5 | 165 | 3.95e-26 | 103 |
MS.gene03529.t1 | AT5G22380 | 36.364 | 154 | 89 | 5 | 19 | 164 | 8 | 160 | 2.73e-25 | 101 |
MS.gene03529.t1 | AT5G64530 | 40.769 | 130 | 63 | 3 | 14 | 141 | 1 | 118 | 2.79e-25 | 99.4 |
MS.gene03529.t1 | AT1G02250 | 30.169 | 295 | 181 | 10 | 14 | 300 | 1 | 278 | 3.36e-25 | 103 |
MS.gene03529.t1 | AT1G02220 | 34.375 | 192 | 111 | 6 | 14 | 200 | 1 | 182 | 1.42e-24 | 102 |
MS.gene03529.t1 | AT2G18060 | 58.974 | 78 | 28 | 2 | 94 | 171 | 2 | 75 | 1.61e-24 | 100 |
MS.gene03529.t1 | AT4G01520 | 38.961 | 154 | 80 | 7 | 17 | 163 | 5 | 151 | 3.25e-24 | 100 |
MS.gene03529.t1 | AT4G01540 | 39.474 | 152 | 78 | 7 | 19 | 163 | 7 | 151 | 1.15e-23 | 100 |
MS.gene03529.t1 | AT4G01540 | 39.474 | 152 | 78 | 7 | 19 | 163 | 7 | 151 | 1.40e-23 | 100 |
MS.gene03529.t1 | AT4G01540 | 39.474 | 152 | 78 | 7 | 19 | 163 | 7 | 151 | 2.25e-23 | 99.8 |
MS.gene03529.t1 | AT4G01540 | 39.474 | 152 | 78 | 7 | 19 | 163 | 7 | 151 | 2.25e-23 | 100 |
MS.gene03529.t1 | AT3G44350 | 38.356 | 146 | 80 | 4 | 16 | 153 | 5 | 148 | 3.17e-23 | 94.0 |
MS.gene03529.t1 | AT3G10490 | 57.317 | 82 | 34 | 1 | 89 | 170 | 2 | 82 | 3.86e-23 | 98.2 |
MS.gene03529.t1 | AT3G10490 | 57.317 | 82 | 34 | 1 | 89 | 170 | 2 | 82 | 3.86e-23 | 98.2 |
MS.gene03529.t1 | AT1G01010 | 38.095 | 168 | 73 | 8 | 11 | 163 | 2 | 153 | 1.34e-21 | 94.7 |
MS.gene03529.t1 | AT2G43000 | 43.158 | 95 | 53 | 1 | 77 | 171 | 1 | 94 | 2.89e-21 | 89.7 |
MS.gene03529.t1 | AT3G56530 | 31.613 | 155 | 99 | 3 | 13 | 164 | 49 | 199 | 7.11e-19 | 85.5 |
MS.gene03529.t1 | AT5G14000 | 37.121 | 132 | 79 | 2 | 14 | 143 | 13 | 142 | 1.39e-18 | 81.3 |
MS.gene03529.t1 | AT5G14000 | 35.366 | 164 | 92 | 5 | 14 | 172 | 13 | 167 | 4.09e-18 | 81.3 |
MS.gene03529.t1 | AT5G50820 | 31.579 | 190 | 106 | 7 | 14 | 191 | 15 | 192 | 3.36e-17 | 78.6 |
MS.gene03529.t1 | AT5G22290 | 45.070 | 71 | 31 | 1 | 95 | 165 | 2 | 64 | 1.63e-15 | 75.1 |
MS.gene03529.t1 | AT3G55210 | 32.121 | 165 | 90 | 6 | 15 | 164 | 10 | 167 | 5.59e-15 | 73.9 |
MS.gene03529.t1 | AT5G14490 | 34.177 | 158 | 81 | 6 | 16 | 152 | 58 | 213 | 3.56e-13 | 69.7 |
MS.gene03529.t1 | AT5G14490 | 34.177 | 158 | 81 | 6 | 16 | 152 | 55 | 210 | 3.61e-13 | 69.3 |
MS.gene03529.t1 | AT5G14490 | 33.121 | 157 | 84 | 5 | 16 | 152 | 58 | 213 | 5.08e-13 | 69.3 |
MS.gene03529.t1 | AT5G14490 | 33.121 | 157 | 84 | 5 | 16 | 152 | 55 | 210 | 5.11e-13 | 68.6 |
MS.gene03529.t1 | AT3G04430 | 31.538 | 130 | 77 | 3 | 22 | 139 | 6 | 135 | 3.19e-12 | 64.7 |
MS.gene03529.t1 | AT4G29230 | 32.903 | 155 | 77 | 5 | 12 | 141 | 43 | 195 | 4.29e-12 | 66.6 |
MS.gene03529.t1 | AT3G56520 | 29.121 | 182 | 91 | 8 | 16 | 178 | 8 | 170 | 3.10e-11 | 61.6 |
Find 56 sgRNAs with CRISPR-Local
Find 114 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCAAAATGGGTGTTGTTAA+AGG | 0.197223 | 3.1:+27542109 | None:intergenic |
TAGTCATTACCTTTATAAAA+AGG | 0.247459 | 3.1:-27543382 | MS.gene03529:CDS |
CCAACTTGGTTTCTTTCAAT+TGG | 0.256365 | 3.1:+27542143 | None:intergenic |
GGTTATAGGTAAAGCCAAAA+TGG | 0.262710 | 3.1:-27543061 | MS.gene03529:intron |
CTAAAGGAGAGAAAAGTAAT+TGG | 0.275422 | 3.1:-27542861 | MS.gene03529:CDS |
GATTTGAAGGAACTTCAAAA+TGG | 0.305077 | 3.1:+27542096 | None:intergenic |
ATAATGAGGTTAGAATCTTT+TGG | 0.317375 | 3.1:-27542263 | MS.gene03529:CDS |
CAATTGATCTATCTACCTTA+TGG | 0.334456 | 3.1:-27541914 | MS.gene03529:CDS |
GAGCTACTGAAGCTGGATAT+TGG | 0.357650 | 3.1:-27542972 | MS.gene03529:CDS |
AGATTGAGTGGGTGATTTGC+AGG | 0.374745 | 3.1:-27542331 | MS.gene03529:CDS |
GTATTCAAGAAGAATTTATC+AGG | 0.375173 | 3.1:-27542308 | MS.gene03529:CDS |
TTGGTTTCTTTCAATTGGAT+TGG | 0.390371 | 3.1:+27542148 | None:intergenic |
TACAGAGGAAAAGCTCTTGT+TGG | 0.410650 | 3.1:-27542922 | MS.gene03529:CDS |
TTTGAACAAATCTGAGCCTT+GGG | 0.417223 | 3.1:-27543316 | MS.gene03529:CDS |
CATAAGGTAGATAGATCAAT+TGG | 0.429936 | 3.1:+27541915 | None:intergenic |
ATTTGAACAAATCTGAGCCT+TGG | 0.438821 | 3.1:-27543317 | MS.gene03529:CDS |
TTCAATTGGATTGGAGAAGC+AGG | 0.441289 | 3.1:+27542157 | None:intergenic |
GCTGGATATTGGAAGGCAAC+TGG | 0.442205 | 3.1:-27542961 | MS.gene03529:CDS |
GTTATAGGTAAAGCCAAAAT+GGG | 0.446731 | 3.1:-27543060 | MS.gene03529:intron |
GTGCAGTTGAAGCAGGTTGA+TGG | 0.452689 | 3.1:+27541937 | None:intergenic |
ATTTGAAGGAACTTCAAAAT+GGG | 0.457032 | 3.1:+27542097 | None:intergenic |
AGATTTAGTGAATGATTTGA+AGG | 0.460614 | 3.1:+27542083 | None:intergenic |
CTAATAAGCTCTTCATCAGT+TGG | 0.462975 | 3.1:+27543402 | None:intergenic |
TAAAGGAGAGAAAAGTAATT+GGG | 0.477512 | 3.1:-27542860 | MS.gene03529:CDS |
ACTAATAGAGCTACTGAAGC+TGG | 0.478520 | 3.1:-27542979 | MS.gene03529:CDS |
TTGAATTCAGTAATTCCATA+AGG | 0.481231 | 3.1:+27541899 | None:intergenic |
TCAATTGGTGCAGTTGAAGC+AGG | 0.484138 | 3.1:+27541930 | None:intergenic |
TCAACAAATTTGCCATTACC+TGG | 0.493752 | 3.1:-27541999 | MS.gene03529:CDS |
AAAAGTACCCAACTGGTTTG+AGG | 0.496887 | 3.1:-27543002 | MS.gene03529:CDS |
CCTGGTTCTGTCTATAACAA+TGG | 0.502369 | 3.1:-27541981 | MS.gene03529:CDS |
ATGCATGAATATAGACTTGA+GGG | 0.513338 | 3.1:-27542835 | MS.gene03529:CDS |
AGGAATCAAAGGTTCCAACT+TGG | 0.513759 | 3.1:+27542129 | None:intergenic |
TTCTGCTAGGGCCATTGGAG+AGG | 0.513843 | 3.1:-27543343 | MS.gene03529:CDS |
GGTAATGGCAAATTTGTTGA+GGG | 0.518830 | 3.1:+27542002 | None:intergenic |
CTATTAGTCCTCAAACCAGT+TGG | 0.520776 | 3.1:+27542994 | None:intergenic |
GGTGTTGTTAAAGGAATCAA+AGG | 0.528587 | 3.1:+27542118 | None:intergenic |
TATTAGTCCTCAAACCAGTT+GGG | 0.531607 | 3.1:+27542995 | None:intergenic |
GAAGGCAACTGGAAAAGATA+AGG | 0.537890 | 3.1:-27542950 | MS.gene03529:CDS |
CATGTCATTCTGGGATAATG+AGG | 0.543430 | 3.1:-27542277 | MS.gene03529:CDS |
TACAAAGGAAGAGCACCTAA+AGG | 0.552423 | 3.1:-27542877 | MS.gene03529:CDS |
TTATAGACAGAACCAGGTAA+TGG | 0.560214 | 3.1:+27541987 | None:intergenic |
AGGTAATGGCAAATTTGTTG+AGG | 0.565495 | 3.1:+27542001 | None:intergenic |
GTTCAAATCAACCTCTCCAA+TGG | 0.570565 | 3.1:+27543332 | None:intergenic |
CCAATTGAAAGAAACCAAGT+TGG | 0.570767 | 3.1:-27542143 | MS.gene03529:CDS |
CCATTGTTATAGACAGAACC+AGG | 0.571803 | 3.1:+27541981 | None:intergenic |
GGTGATGAATCTGTGAGTGG+TGG | 0.583550 | 3.1:+27542215 | None:intergenic |
AAAGATAAGGAGATTTACAG+AGG | 0.584344 | 3.1:-27542937 | MS.gene03529:CDS |
AACTTACATGGCAAATCCCA+AGG | 0.588889 | 3.1:+27543300 | None:intergenic |
TACTGAAGCTGGATATTGGA+AGG | 0.589257 | 3.1:-27542968 | MS.gene03529:CDS |
TTGGAGAAGCAGGACACGTA+AGG | 0.590495 | 3.1:+27542167 | None:intergenic |
GATTGAGTGGGTGATTTGCA+GGG | 0.595659 | 3.1:-27542330 | MS.gene03529:CDS |
CAACCTCCCTAAAACTGCCA+AGG | 0.602916 | 3.1:-27542797 | MS.gene03529:intron |
AATGCATGAATATAGACTTG+AGG | 0.610990 | 3.1:-27542836 | MS.gene03529:CDS |
GTTGGATGAAACCTAAACCC+TGG | 0.635628 | 3.1:+27543420 | None:intergenic |
TAAGGTGATGAATCTGTGAG+TGG | 0.710371 | 3.1:+27542212 | None:intergenic |
GGATGAAACCTAAACCCTGG+AGG | 0.741977 | 3.1:+27543423 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAAAAATAGGTATACATTTT+TGG | + | chr3.1:27542618-27542637 | None:intergenic | 15.0% |
!!! | AAATGTATACCTATTTTTTT+CGG | - | chr3.1:27542619-27542638 | MS.gene03529:intron | 15.0% |
!!! | CTTTTATGATATGATAAATT+TGG | - | chr3.1:27542294-27542313 | MS.gene03529:CDS | 15.0% |
!! | GATATGATAAATTTGGTTAT+AGG | - | chr3.1:27542301-27542320 | MS.gene03529:CDS | 20.0% |
!! | GTAAATGATAGGTTTATATT+AGG | - | chr3.1:27542204-27542223 | MS.gene03529:CDS | 20.0% |
!! | TAGTCATTACCTTTATAAAA+AGG | - | chr3.1:27541994-27542013 | MS.gene03529:CDS | 20.0% |
!!! | AAATATTTCAGTTTTGTGTA+AGG | - | chr3.1:27541910-27541929 | MS.gene03529:CDS | 20.0% |
!!! | TATTTAAAGCCGAAAAAAAT+AGG | + | chr3.1:27542631-27542650 | None:intergenic | 20.0% |
!!! | TGTCAATTACCTTTTTATAA+AGG | + | chr3.1:27542006-27542025 | None:intergenic | 20.0% |
!!! | TTTTTTTCGGCTTTAAATAA+AGG | - | chr3.1:27542632-27542651 | MS.gene03529:intron | 20.0% |
! | AGATTTAGTGAATGATTTGA+AGG | + | chr3.1:27543296-27543315 | None:intergenic | 25.0% |
! | ATTTGAAGGAACTTCAAAAT+GGG | + | chr3.1:27543282-27543301 | None:intergenic | 25.0% |
! | CCAAAAAATACACTTTCTAT+TGG | - | chr3.1:27543317-27543336 | MS.gene03529:CDS | 25.0% |
! | GTATTCAAGAAGAATTTATC+AGG | - | chr3.1:27543068-27543087 | MS.gene03529:intron | 25.0% |
! | TAAAGGAGAGAAAAGTAATT+GGG | - | chr3.1:27542516-27542535 | MS.gene03529:intron | 25.0% |
!! | ATAATGAGGTTAGAATCTTT+TGG | - | chr3.1:27543113-27543132 | MS.gene03529:intron | 25.0% |
!! | TTGATTTTGTCAATGGAATA+AGG | + | chr3.1:27543185-27543204 | None:intergenic | 25.0% |
!!! | AAAACTCTTGTTTTCTACAA+AGG | - | chr3.1:27542484-27542503 | MS.gene03529:intron | 25.0% |
!!! | AAGACCACTTTTAAAAATGT+TGG | - | chr3.1:27542762-27542781 | MS.gene03529:intron | 25.0% |
!!! | ACAACCAACATTTTTAAAAG+TGG | + | chr3.1:27542769-27542788 | None:intergenic | 25.0% |
!!! | CCAATAGAAAGTGTATTTTT+TGG | + | chr3.1:27543320-27543339 | None:intergenic | 25.0% |
!!! | TTTTAAAAGTGGTCTTAGTA+AGG | + | chr3.1:27542758-27542777 | None:intergenic | 25.0% |
AAAGATAAGGAGATTTACAG+AGG | - | chr3.1:27542439-27542458 | MS.gene03529:intron | 30.0% | |
AATGCATGAATATAGACTTG+AGG | - | chr3.1:27542540-27542559 | MS.gene03529:intron | 30.0% | |
AGGACTCATAATAACTTACA+TGG | + | chr3.1:27542091-27542110 | None:intergenic | 30.0% | |
ATGCATGAATATAGACTTGA+GGG | - | chr3.1:27542541-27542560 | MS.gene03529:intron | 30.0% | |
CAATGATCAAAAACACAAGT+AGG | + | chr3.1:27542111-27542130 | None:intergenic | 30.0% | |
CAATTGATCTATCTACCTTA+TGG | - | chr3.1:27543462-27543481 | MS.gene03529:CDS | 30.0% | |
CATAAGGTAGATAGATCAAT+TGG | + | chr3.1:27543464-27543483 | None:intergenic | 30.0% | |
CTAAAGGAGAGAAAAGTAAT+TGG | - | chr3.1:27542515-27542534 | MS.gene03529:intron | 30.0% | |
GATTTGAAGGAACTTCAAAA+TGG | + | chr3.1:27543283-27543302 | None:intergenic | 30.0% | |
GTTATAGGTAAAGCCAAAAT+GGG | - | chr3.1:27542316-27542335 | MS.gene03529:CDS | 30.0% | |
TAATTCATATGCACGTAGAT+CGG | - | chr3.1:27542134-27542153 | MS.gene03529:CDS | 30.0% | |
TGAATGTAATCACATGTAAC+AGG | + | chr3.1:27542915-27542934 | None:intergenic | 30.0% | |
TTGGAATAGAGAATTTACCT+TGG | + | chr3.1:27542599-27542618 | None:intergenic | 30.0% | |
TTGGTTTCTTTCAATTGGAT+TGG | + | chr3.1:27543231-27543250 | None:intergenic | 30.0% | |
TTTCATCGCATGTAAATGAT+AGG | - | chr3.1:27542193-27542212 | MS.gene03529:CDS | 30.0% | |
! | AATTTACCTTGGCAGTTTTA+GGG | + | chr3.1:27542588-27542607 | None:intergenic | 30.0% |
! | TGACATAAACTTTTCTGCTA+GGG | - | chr3.1:27542021-27542040 | MS.gene03529:CDS | 30.0% |
! | TTGACATAAACTTTTCTGCT+AGG | - | chr3.1:27542020-27542039 | MS.gene03529:CDS | 30.0% |
!! | AGGTGATTTGATTTTGTCAA+TGG | + | chr3.1:27543192-27543211 | None:intergenic | 30.0% |
!! | CAATTACTTTTCTCTCCTTT+AGG | + | chr3.1:27542517-27542536 | None:intergenic | 30.0% |
!! | TCATTTCGACTAATTGGTTT+TGG | - | chr3.1:27543011-27543030 | MS.gene03529:CDS | 30.0% |
!! | TTCAAAATGGGTGTTGTTAA+AGG | + | chr3.1:27543270-27543289 | None:intergenic | 30.0% |
!!! | TAATTGGTTTTGGTCTTTTG+TGG | - | chr3.1:27543021-27543040 | MS.gene03529:CDS | 30.0% |
AATTCATATGCACGTAGATC+GGG | - | chr3.1:27542135-27542154 | MS.gene03529:CDS | 35.0% | |
AGTGCTTCATTTCGACTAAT+TGG | - | chr3.1:27543005-27543024 | MS.gene03529:CDS | 35.0% | |
ATTTGAACAAATCTGAGCCT+TGG | - | chr3.1:27542059-27542078 | MS.gene03529:CDS | 35.0% | |
CCAACTTGGTTTCTTTCAAT+TGG | + | chr3.1:27543236-27543255 | None:intergenic | 35.0% | |
CCAATTGAAAGAAACCAAGT+TGG | - | chr3.1:27543233-27543252 | MS.gene03529:intron | 35.0% | |
CTAATAAGCTCTTCATCAGT+TGG | + | chr3.1:27541977-27541996 | None:intergenic | 35.0% | |
GCAAAAAGACATGTCATTCT+GGG | - | chr3.1:27543090-27543109 | MS.gene03529:intron | 35.0% | |
GGTTATAGGTAAAGCCAAAA+TGG | - | chr3.1:27542315-27542334 | MS.gene03529:CDS | 35.0% | |
TATTAGTCCTCAAACCAGTT+GGG | + | chr3.1:27542384-27542403 | None:intergenic | 35.0% | |
TCAACAAATTTGCCATTACC+TGG | - | chr3.1:27543377-27543396 | MS.gene03529:CDS | 35.0% | |
TTATAGACAGAACCAGGTAA+TGG | + | chr3.1:27543392-27543411 | None:intergenic | 35.0% | |
TTTGAACAAATCTGAGCCTT+GGG | - | chr3.1:27542060-27542079 | MS.gene03529:CDS | 35.0% | |
! | GAATTTACCTTGGCAGTTTT+AGG | + | chr3.1:27542589-27542608 | None:intergenic | 35.0% |
! | GGTTCATTTTACTCTACTCA+AGG | - | chr3.1:27543338-27543357 | MS.gene03529:CDS | 35.0% |
!! | AGGTAATGGCAAATTTGTTG+AGG | + | chr3.1:27543378-27543397 | None:intergenic | 35.0% |
!! | GGTAATGGCAAATTTGTTGA+GGG | + | chr3.1:27543377-27543396 | None:intergenic | 35.0% |
!! | GGTGTTGTTAAAGGAATCAA+AGG | + | chr3.1:27543261-27543280 | None:intergenic | 35.0% |
!! | TTCAGTTTTGTGTAAGGAAG+AGG | - | chr3.1:27541916-27541935 | MS.gene03529:CDS | 35.0% |
AACTTACATGGCAAATCCCA+AGG | + | chr3.1:27542079-27542098 | None:intergenic | 40.0% | |
ACGCCTTAGATCAAATGTGT+TGG | + | chr3.1:27542823-27542842 | None:intergenic | 40.0% | |
ACTAATAGAGCTACTGAAGC+TGG | - | chr3.1:27542397-27542416 | MS.gene03529:intron | 40.0% | |
AGGAATCAAAGGTTCCAACT+TGG | + | chr3.1:27543250-27543269 | None:intergenic | 40.0% | |
CCAAAATGGGTGAAAAAGAG+TGG | - | chr3.1:27542329-27542348 | MS.gene03529:CDS | 40.0% | |
CCATTGTTATAGACAGAACC+AGG | + | chr3.1:27543398-27543417 | None:intergenic | 40.0% | |
CTATTAGTCCTCAAACCAGT+TGG | + | chr3.1:27542385-27542404 | None:intergenic | 40.0% | |
GAAGGCAACTGGAAAAGATA+AGG | - | chr3.1:27542426-27542445 | MS.gene03529:intron | 40.0% | |
GACACAAACACATGTCATGT+TGG | + | chr3.1:27542878-27542897 | None:intergenic | 40.0% | |
GCACCAACACATTTGATCTA+AGG | - | chr3.1:27542817-27542836 | MS.gene03529:CDS | 40.0% | |
GGCAAAAAGACATGTCATTC+TGG | - | chr3.1:27543089-27543108 | MS.gene03529:intron | 40.0% | |
GGCTAATGTGATTGCAATTG+AGG | - | chr3.1:27542685-27542704 | MS.gene03529:intron | 40.0% | |
GTTCAAATCAACCTCTCCAA+TGG | + | chr3.1:27542047-27542066 | None:intergenic | 40.0% | |
TAAGGTGATGAATCTGTGAG+TGG | + | chr3.1:27543167-27543186 | None:intergenic | 40.0% | |
TACAGAGGAAAAGCTCTTGT+TGG | - | chr3.1:27542454-27542473 | MS.gene03529:intron | 40.0% | |
TACTGAAGCTGGATATTGGA+AGG | - | chr3.1:27542408-27542427 | MS.gene03529:intron | 40.0% | |
! | ATCAGATGATTTTGCCTCCA+GGG | - | chr3.1:27541939-27541958 | MS.gene03529:CDS | 40.0% |
! | TCTTTTGTGGCAGATTGAGT+GGG | - | chr3.1:27543034-27543053 | MS.gene03529:CDS | 40.0% |
! | TTCAATTGGATTGGAGAAGC+AGG | + | chr3.1:27543222-27543241 | None:intergenic | 40.0% |
!! | AAAAGTACCCAACTGGTTTG+AGG | - | chr3.1:27542374-27542393 | MS.gene03529:intron | 40.0% |
!! | AGAGACAAAAAGTACCCAAC+TGG | - | chr3.1:27542367-27542386 | MS.gene03529:intron | 40.0% |
!! | ATCACATTAGCCTTATGCCA+CGG | + | chr3.1:27542677-27542696 | None:intergenic | 40.0% |
!! | CATGTCATTCTGGGATAATG+AGG | - | chr3.1:27543099-27543118 | MS.gene03529:intron | 40.0% |
!! | CCACTCTTTTTCACCCATTT+TGG | + | chr3.1:27542332-27542351 | None:intergenic | 40.0% |
!! | CCTGGTTCTGTCTATAACAA+TGG | - | chr3.1:27543395-27543414 | MS.gene03529:CDS | 40.0% |
!! | TACAAAGGAAGAGCACCTAA+AGG | - | chr3.1:27542499-27542518 | MS.gene03529:intron | 40.0% |
!! | TCATTAGTGTTGACCTGCAA+GGG | - | chr3.1:27542964-27542983 | MS.gene03529:CDS | 40.0% |
GAGCTACTGAAGCTGGATAT+TGG | - | chr3.1:27542404-27542423 | MS.gene03529:intron | 45.0% | |
GTAGTATAAGCCGTGGCATA+AGG | - | chr3.1:27542664-27542683 | MS.gene03529:intron | 45.0% | |
GTTGGATGAAACCTAAACCC+TGG | + | chr3.1:27541959-27541978 | None:intergenic | 45.0% | |
TCAATTGGTGCAGTTGAAGC+AGG | + | chr3.1:27543449-27543468 | None:intergenic | 45.0% | |
TCACATGTAACAGGTCGTGT+TGG | + | chr3.1:27542906-27542925 | None:intergenic | 45.0% | |
! | AACTTTTCTGCTAGGGCCAT+TGG | - | chr3.1:27542028-27542047 | MS.gene03529:CDS | 45.0% |
! | AGATTGAGTGGGTGATTTGC+AGG | - | chr3.1:27543045-27543064 | MS.gene03529:CDS | 45.0% |
! | CATTTGATCTAAGGCGTGTC+TGG | - | chr3.1:27542826-27542845 | MS.gene03529:CDS | 45.0% |
! | GATCAGATGATTTTGCCTCC+AGG | - | chr3.1:27541938-27541957 | MS.gene03529:CDS | 45.0% |
! | GATTGAGTGGGTGATTTGCA+GGG | - | chr3.1:27543046-27543065 | MS.gene03529:CDS | 45.0% |
! | GTCTTTTGTGGCAGATTGAG+TGG | - | chr3.1:27543033-27543052 | MS.gene03529:CDS | 45.0% |
! | TGATTTTGCCTCCAGGGTTT+AGG | - | chr3.1:27541945-27541964 | MS.gene03529:CDS | 45.0% |
!! | CTCATTAGTGTTGACCTGCA+AGG | - | chr3.1:27542963-27542982 | MS.gene03529:CDS | 45.0% |
!!! | GTAACAGGTCGTGTTGGTTT+TGG | + | chr3.1:27542900-27542919 | None:intergenic | 45.0% |
!!! | TTACCTTGGCAGTTTTAGGG+AGG | + | chr3.1:27542585-27542604 | None:intergenic | 45.0% |
CAACCTCCCTAAAACTGCCA+AGG | - | chr3.1:27542579-27542598 | MS.gene03529:intron | 50.0% | |
GCTGGATATTGGAAGGCAAC+TGG | - | chr3.1:27542415-27542434 | MS.gene03529:intron | 50.0% | |
GGATGAAACCTAAACCCTGG+AGG | + | chr3.1:27541956-27541975 | None:intergenic | 50.0% | |
GGTGATGAATCTGTGAGTGG+TGG | + | chr3.1:27543164-27543183 | None:intergenic | 50.0% | |
TGCGATCGTAGTATAAGCCG+TGG | - | chr3.1:27542657-27542676 | MS.gene03529:intron | 50.0% | |
TTGGAGAAGCAGGACACGTA+AGG | + | chr3.1:27543212-27543231 | None:intergenic | 50.0% | |
! | GTGCAGTTGAAGCAGGTTGA+TGG | + | chr3.1:27543442-27543461 | None:intergenic | 50.0% |
AACACGACACTGACCCTTGC+AGG | + | chr3.1:27542980-27542999 | None:intergenic | 55.0% | |
TTCTGCTAGGGCCATTGGAG+AGG | - | chr3.1:27542033-27542052 | MS.gene03529:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 27541905 | 27543493 | 27541905 | ID=MS.gene03529 |
chr3.1 | mRNA | 27541905 | 27543493 | 27541905 | ID=MS.gene03529.t1;Parent=MS.gene03529 |
chr3.1 | exon | 27543307 | 27543493 | 27543307 | ID=MS.gene03529.t1.exon1;Parent=MS.gene03529.t1 |
chr3.1 | CDS | 27543307 | 27543493 | 27543307 | ID=cds.MS.gene03529.t1;Parent=MS.gene03529.t1 |
chr3.1 | exon | 27542798 | 27543075 | 27542798 | ID=MS.gene03529.t1.exon2;Parent=MS.gene03529.t1 |
chr3.1 | CDS | 27542798 | 27543075 | 27542798 | ID=cds.MS.gene03529.t1;Parent=MS.gene03529.t1 |
chr3.1 | exon | 27541905 | 27542351 | 27541905 | ID=MS.gene03529.t1.exon3;Parent=MS.gene03529.t1 |
chr3.1 | CDS | 27541905 | 27542351 | 27541905 | ID=cds.MS.gene03529.t1;Parent=MS.gene03529.t1 |
Gene Sequence |
Protein sequence |