Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035350.t1 | XP_003609679.1 | 98.3 | 651 | 11 | 0 | 1 | 651 | 1 | 651 | 0.00E+00 | 1314.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035350.t1 | Q96IK5 | 28.0 | 200 | 135 | 4 | 48 | 246 | 90 | 281 | 1.2e-14 | 83.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035350.t1 | G7JLI1 | 98.3 | 651 | 11 | 0 | 1 | 651 | 1 | 651 | 0.0e+00 | 1314.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene035350.t1 | TR | TRAF |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035350.t1 | MTR_4g119960 | 98.310 | 651 | 11 | 0 | 1 | 651 | 1 | 651 | 0.0 | 1338 |
| MS.gene035350.t1 | MTR_4g119960 | 97.847 | 418 | 9 | 0 | 234 | 651 | 2 | 419 | 0.0 | 855 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035350.t1 | AT4G15840 | 56.070 | 626 | 235 | 13 | 34 | 651 | 43 | 636 | 0.0 | 636 |
| MS.gene035350.t1 | AT4G15840 | 56.070 | 626 | 235 | 13 | 34 | 651 | 43 | 636 | 0.0 | 636 |
Find 0 sgRNAs with CRISPR-Local
Find 277 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATTTGTATAATTTAGAT+AGG | + | 32576:11850-11869 | MS.gene035350:intron | 10.0% |
| !! | TATTTCTTAATATATTTGAA+GGG | + | 32576:13522-13541 | MS.gene035350:CDS | 10.0% |
| !!! | AGATTTATAATGTTTTTATT+TGG | + | 32576:12264-12283 | MS.gene035350:intron | 10.0% |
| !! | AAAATGATTTATGTTTAGAT+AGG | + | 32576:11639-11658 | MS.gene035350:intron | 15.0% |
| !! | AAATAAAAACTACAAATTCT+AGG | + | 32576:11711-11730 | MS.gene035350:intron | 15.0% |
| !! | ATTTCTTAATATATTTGAAG+GGG | + | 32576:13523-13542 | MS.gene035350:CDS | 15.0% |
| !! | CATTATTATCATTAAGTTTA+GGG | - | 32576:12104-12123 | MS.gene035350:intergenic | 15.0% |
| !! | GTATTTCTTAATATATTTGA+AGG | + | 32576:13521-13540 | MS.gene035350:CDS | 15.0% |
| !!! | TTTTTCTTTAAGATTCTAAA+TGG | - | 32576:13697-13716 | MS.gene035350:intergenic | 15.0% |
| !! | ACATCATGAAGTAAAATATA+CGG | - | 32576:11523-11542 | MS.gene035350:intergenic | 20.0% |
| !! | AGTAGTTAAATTTCACAAAT+GGG | - | 32576:12407-12426 | MS.gene035350:intergenic | 20.0% |
| !! | ATAATCATAACAATATACCT+GGG | + | 32576:14187-14206 | MS.gene035350:CDS | 20.0% |
| !! | ATTCATTGGACTAAAATTAT+TGG | + | 32576:13972-13991 | MS.gene035350:intron | 20.0% |
| !! | GCATTATTATCATTAAGTTT+AGG | - | 32576:12105-12124 | MS.gene035350:intergenic | 20.0% |
| !! | GTATAGAAATTACTATTCAT+TGG | + | 32576:13958-13977 | MS.gene035350:intron | 20.0% |
| !! | GTATCTATTCTTGAAAATAT+TGG | + | 32576:13877-13896 | MS.gene035350:intron | 20.0% |
| !! | TACAAAGATTATGTTTGATT+TGG | + | 32576:12644-12663 | MS.gene035350:intron | 20.0% |
| !! | TAGTAGTTAAATTTCACAAA+TGG | - | 32576:12408-12427 | MS.gene035350:intergenic | 20.0% |
| !! | TATCAAGCAAAAAGATTAAA+CGG | - | 32576:12241-12260 | MS.gene035350:intergenic | 20.0% |
| !! | TTTCTTAATATATTTGAAGG+GGG | + | 32576:13524-13543 | MS.gene035350:CDS | 20.0% |
| !!! | AACTAACTTTGAAGTAAATT+CGG | - | 32576:11613-11632 | MS.gene035350:intergenic | 20.0% |
| !!! | ATTAGTTTTTAAGCCTTTTA+AGG | - | 32576:13756-13775 | MS.gene035350:intergenic | 20.0% |
| !!! | TTAAATACAAGTTTGTTATC+TGG | + | 32576:11944-11963 | MS.gene035350:intron | 20.0% |
| !!! | TTAGTTTTTAAGCCTTTTAA+GGG | - | 32576:13755-13774 | MS.gene035350:intergenic | 20.0% |
| ! | AATAACGGTTTAAACAAACT+TGG | - | 32576:13825-13844 | MS.gene035350:intergenic | 25.0% |
| ! | AATGTATGAGATGAAAGTTT+AGG | - | 32576:12695-12714 | MS.gene035350:intergenic | 25.0% |
| ! | ATAATTTAGATAGGAAAACG+AGG | + | 32576:11859-11878 | MS.gene035350:intron | 25.0% |
| ! | ATTTCATTATATCTGAGCTA+TGG | + | 32576:12330-12349 | MS.gene035350:CDS | 25.0% |
| ! | CATAATCATAACAATATACC+TGG | + | 32576:14186-14205 | MS.gene035350:CDS | 25.0% |
| ! | CATTGCATTAACAACTATAT+CGG | - | 32576:11328-11347 | MS.gene035350:intergenic | 25.0% |
| ! | GATATAGTTGTTAATGCAAT+GGG | + | 32576:11327-11346 | MS.gene035350:CDS | 25.0% |
| ! | GTAGTTAAATTTCACAAATG+GGG | - | 32576:12406-12425 | MS.gene035350:intergenic | 25.0% |
| ! | TAATCATAACAATATACCTG+GGG | + | 32576:14188-14207 | MS.gene035350:CDS | 25.0% |
| ! | TATTAATGATCATGCCTTTA+CGG | - | 32576:12218-12237 | MS.gene035350:intergenic | 25.0% |
| ! | TATTATCATTAAGTTTAGGG+TGG | - | 32576:12101-12120 | MS.gene035350:intergenic | 25.0% |
| ! | TATTCAAATCATAACCGTAA+AGG | + | 32576:12201-12220 | MS.gene035350:intron | 25.0% |
| !! | ACAAAATCAACTTTTGTCAT+CGG | - | 32576:11586-11605 | MS.gene035350:intergenic | 25.0% |
| !! | ACTACTACTGTATACATTTT+TGG | + | 32576:12421-12440 | MS.gene035350:intron | 25.0% |
| !! | ATATACGGATTACATTATTC+AGG | - | 32576:11508-11527 | MS.gene035350:intergenic | 25.0% |
| !! | CTACTACTGTATACATTTTT+GGG | + | 32576:12422-12441 | MS.gene035350:intron | 25.0% |
| !! | TATACGGATTACATTATTCA+GGG | - | 32576:11507-11526 | MS.gene035350:intergenic | 25.0% |
| !! | TTTTCTAATGCTTCATGAAA+AGG | + | 32576:12835-12854 | MS.gene035350:intron | 25.0% |
| !!! | ATTTCAATAATTTTGACACG+AGG | - | 32576:11448-11467 | MS.gene035350:intergenic | 25.0% |
| !!! | TAGTTTTTAAGCCTTTTAAG+GGG | - | 32576:13754-13773 | MS.gene035350:intergenic | 25.0% |
| !!! | TATGTTGTTGTTTACATTGA+TGG | + | 32576:12166-12185 | MS.gene035350:intron | 25.0% |
| AAATCAATCATGTGGCATAT+AGG | + | 32576:13923-13942 | MS.gene035350:intron | 30.0% | |
| AATCATAACAATATACCTGG+GGG | + | 32576:14189-14208 | MS.gene035350:CDS | 30.0% | |
| AATGAAACAAGGAATGATTG+TGG | - | 32576:11415-11434 | MS.gene035350:intergenic | 30.0% | |
| AATTCTGCAAATCAATCATG+TGG | + | 32576:13915-13934 | MS.gene035350:intron | 30.0% | |
| ACATTTCTGATTCCAATCAA+CGG | + | 32576:13117-13136 | MS.gene035350:CDS | 30.0% | |
| ACCATTCAGATAACAACAAT+AGG | + | 32576:13333-13352 | MS.gene035350:CDS | 30.0% | |
| ATAACCTGAAATATGAACTG+CGG | - | 32576:11386-11405 | MS.gene035350:intergenic | 30.0% | |
| ATGTTCTTGTATGTAAGATC+CGG | - | 32576:14169-14188 | MS.gene035350:intergenic | 30.0% | |
| ATTCATTCTGATAACACCAA+GGG | + | 32576:12954-12973 | MS.gene035350:CDS | 30.0% | |
| CAAATTGAAGGTTTCAATTC+CGG | + | 32576:11294-11313 | MS.gene035350:CDS | 30.0% | |
| CGATATAGTTGTTAATGCAA+TGG | + | 32576:11326-11345 | MS.gene035350:CDS | 30.0% | |
| CTTCATGAAAAGGTTTGAAT+TGG | + | 32576:12845-12864 | MS.gene035350:intron | 30.0% | |
| GAGTCTTAAAAGTGATCTAA+AGG | + | 32576:13034-13053 | MS.gene035350:CDS | 30.0% | |
| GATAGAGAGAAAATGAAACA+AGG | - | 32576:11426-11445 | MS.gene035350:intergenic | 30.0% | |
| GTAAAAATGCAAACTGCTTA+TGG | - | 32576:14134-14153 | MS.gene035350:intergenic | 30.0% | |
| GTGTATCATTACATCTATGT+AGG | + | 32576:12286-12305 | MS.gene035350:intron | 30.0% | |
| TAACCACAAAACCCAAATAA+AGG | - | 32576:12785-12804 | MS.gene035350:intergenic | 30.0% | |
| TCAAGAATAGATACTTCTTG+AGG | - | 32576:13871-13890 | MS.gene035350:intergenic | 30.0% | |
| TGATAACAATGTTAATGACG+AGG | + | 32576:12041-12060 | MS.gene035350:CDS | 30.0% | |
| TTCAGATAACAACAATAGGT+TGG | + | 32576:13337-13356 | MS.gene035350:CDS | 30.0% | |
| ! | AAACAAACTTGGTCTGTTTT+AGG | - | 32576:13814-13833 | MS.gene035350:intergenic | 30.0% |
| ! | AACAAACTTGGTCTGTTTTA+GGG | - | 32576:13813-13832 | MS.gene035350:intergenic | 30.0% |
| ! | AAGCAGTTTGCATTTTTACA+TGG | + | 32576:14135-14154 | MS.gene035350:CDS | 30.0% |
| ! | ACCTATTGTTGTTATCTGAA+TGG | - | 32576:13337-13356 | MS.gene035350:intergenic | 30.0% |
| ! | ATACGGATTACATTATTCAG+GGG | - | 32576:11506-11525 | MS.gene035350:intergenic | 30.0% |
| ! | CTTCATGATGTGTGTAATTT+TGG | + | 32576:11532-11551 | MS.gene035350:intron | 30.0% |
| ! | TCTTTTTGACATTACTGCTT+TGG | + | 32576:14003-14022 | MS.gene035350:intron | 30.0% |
| !! | AGTTTTTAAGCCTTTTAAGG+GGG | - | 32576:13753-13772 | MS.gene035350:intergenic | 30.0% |
| !! | ATTGTTATCATCGATTTGCA+GGG | - | 32576:12031-12050 | MS.gene035350:intergenic | 30.0% |
| !! | TGTATCATTGGCCTTTATTT+GGG | + | 32576:12771-12790 | MS.gene035350:intron | 30.0% |
| !!! | TACATTTTTGGGTCAGTTAT+TGG | + | 32576:12433-12452 | MS.gene035350:intron | 30.0% |
| AACCAAGATTATGGCATTCA+TGG | + | 32576:12489-12508 | MS.gene035350:CDS | 35.0% | |
| AACTATATCGGAAAAAGAGC+CGG | - | 32576:11316-11335 | MS.gene035350:intergenic | 35.0% | |
| AAGCTGTAAATGATGGTCTA+TGG | + | 32576:13627-13646 | MS.gene035350:CDS | 35.0% | |
| AATCTCCAAGCTCAACTAAA+AGG | - | 32576:13076-13095 | MS.gene035350:intergenic | 35.0% | |
| AATTCATTGTCTGATCCAGA+CGG | + | 32576:13218-13237 | MS.gene035350:CDS | 35.0% | |
| AATTTGAACATGTTCGCAGA+GGG | - | 32576:11280-11299 | MS.gene035350:intergenic | 35.0% | |
| ACCAAGATTATGGCATTCAT+GGG | + | 32576:12490-12509 | MS.gene035350:CDS | 35.0% | |
| AGAATAGATACTTCTTGAGG+AGG | - | 32576:13868-13887 | MS.gene035350:intergenic | 35.0% | |
| ATTGCCTTGGCATATCTTTA+TGG | + | 32576:12072-12091 | MS.gene035350:CDS | 35.0% | |
| CATTCATTCTGATAACACCA+AGG | + | 32576:12953-12972 | MS.gene035350:CDS | 35.0% | |
| CATTTCTGATTCCAATCAAC+GGG | + | 32576:13118-13137 | MS.gene035350:CDS | 35.0% | |
| GACAATGAATTACCCAATGA+AGG | - | 32576:13209-13228 | MS.gene035350:intergenic | 35.0% | |
| GAGAACATCATGTTATGTTG+AGG | + | 32576:13244-13263 | MS.gene035350:CDS | 35.0% | |
| GATTACATTATTCAGGGGAA+CGG | - | 32576:11501-11520 | MS.gene035350:intergenic | 35.0% | |
| GTAAACAACAACATACCTGA+AGG | - | 32576:12161-12180 | MS.gene035350:intergenic | 35.0% | |
| TAACCTGAAATATGAACTGC+GGG | - | 32576:11385-11404 | MS.gene035350:intergenic | 35.0% | |
| TATGTTGCTGAATCTTCTAC+AGG | + | 32576:14225-14244 | MS.gene035350:CDS | 35.0% | |
| TCATCTCTATAGTTTCCTCT+GGG | - | 32576:13494-13513 | MS.gene035350:intergenic | 35.0% | |
| TCTTCTACAGGTGAAAGAAA+TGG | + | 32576:14237-14256 | MS.gene035350:CDS | 35.0% | |
| TGCGAACATGTTCAAATTGA+AGG | + | 32576:11282-11301 | MS.gene035350:CDS | 35.0% | |
| TTATCTGGTGTTTGTGATTC+AGG | + | 32576:11959-11978 | MS.gene035350:intron | 35.0% | |
| TTCAAACTTCTTGGCTTATC+AGG | + | 32576:12355-12374 | MS.gene035350:CDS | 35.0% | |
| TTCATCTCTATAGTTTCCTC+TGG | - | 32576:13495-13514 | MS.gene035350:intergenic | 35.0% | |
| TTGCCTTGGCATATCTTTAT+GGG | + | 32576:12073-12092 | MS.gene035350:CDS | 35.0% | |
| TTGGATCATTGTTATCGGAA+TGG | - | 32576:11218-11237 | MS.gene035350:intergenic | 35.0% | |
| TTTCATCGAGTTCTTGTAGT+GGG | + | 32576:13384-13403 | MS.gene035350:CDS | 35.0% | |
| ! | AAGATGTTGGAAACTGACTT+GGG | + | 32576:13005-13024 | MS.gene035350:CDS | 35.0% |
| ! | CGAAAAGTGTAACATGTCAT+TGG | - | 32576:13784-13803 | MS.gene035350:intergenic | 35.0% |
| ! | GAAGTGTTTAAGTGCATGTT+TGG | + | 32576:11556-11575 | MS.gene035350:intron | 35.0% |
| ! | TGGATTCAAGTTTGGTGAAA+TGG | - | 32576:13162-13181 | MS.gene035350:intergenic | 35.0% |
| ! | TTTTCATCGAGTTCTTGTAG+TGG | + | 32576:13383-13402 | MS.gene035350:CDS | 35.0% |
| ! | TTTTTACATGGATCTACCAC+CGG | + | 32576:14147-14166 | MS.gene035350:CDS | 35.0% |
| !! | ACAAACTTGGTCTGTTTTAG+GGG | - | 32576:13812-13831 | MS.gene035350:intergenic | 35.0% |
| !! | AGGAAAACGAAAAGTGTTAG+GGG | - | 32576:13848-13867 | MS.gene035350:intergenic | 35.0% |
| !! | ATGTTAGAGGTGCTATTGAT+GGG | + | 32576:14283-14302 | MS.gene035350:CDS | 35.0% |
| !! | CATTGTTATCATCGATTTGC+AGG | - | 32576:12032-12051 | MS.gene035350:intergenic | 35.0% |
| !! | GAAAAGTGTTAGGGGAATAA+CGG | - | 32576:13840-13859 | MS.gene035350:intergenic | 35.0% |
| !! | GAGGAAAACGAAAAGTGTTA+GGG | - | 32576:13849-13868 | MS.gene035350:intergenic | 35.0% |
| !! | GTGTATCATTGGCCTTTATT+TGG | + | 32576:12770-12789 | MS.gene035350:intron | 35.0% |
| AACCAAGTGCTTGCTTCATT+TGG | + | 32576:12587-12606 | MS.gene035350:intron | 40.0% | |
| AACTACATTTGTTCCTGCAG+CGG | + | 32576:14326-14345 | MS.gene035350:CDS | 40.0% | |
| AAGATTGAACATCCTGCACA+TGG | + | 32576:12903-12922 | MS.gene035350:CDS | 40.0% | |
| ACGTGCTTCTGAATCATCAT+TGG | - | 32576:14427-14446 | MS.gene035350:intergenic | 40.0% | |
| AGAAAGCAGCTTGAAGAGAT+AGG | + | 32576:13593-13612 | MS.gene035350:CDS | 40.0% | |
| AGAAGCGGTAAGTGTATCAT+TGG | + | 32576:12759-12778 | MS.gene035350:intron | 40.0% | |
| ATTCATTGTCTGATCCAGAC+GGG | + | 32576:13219-13238 | MS.gene035350:CDS | 40.0% | |
| CAAGATGTTGGAAACTGACT+TGG | + | 32576:13004-13023 | MS.gene035350:CDS | 40.0% | |
| CAATTTGAACATGTTCGCAG+AGG | - | 32576:11281-11300 | MS.gene035350:intergenic | 40.0% | |
| CAGGAACAAATGTAGTTCCA+CGG | - | 32576:14323-14342 | MS.gene035350:intergenic | 40.0% | |
| CCAAGATTATGGCATTCATG+GGG | + | 32576:12491-12510 | MS.gene035350:CDS | 40.0% | |
| CCAAGCTCAACTAAAAGGTT+AGG | - | 32576:13071-13090 | MS.gene035350:intergenic | 40.0% | |
| CCATCATTTACAGCTTTGCA+AGG | - | 32576:13623-13642 | MS.gene035350:intergenic | 40.0% | |
| CCTTGCAAAGCTGTAAATGA+TGG | + | 32576:13620-13639 | MS.gene035350:CDS | 40.0% | |
| CGAGAAAAGACAAATCGTGT+AGG | - | 32576:14360-14379 | MS.gene035350:intergenic | 40.0% | |
| GAAAAGACAAATCGTGTAGG+AGG | - | 32576:14357-14376 | MS.gene035350:intergenic | 40.0% | |
| GACTGTTTACTAGGTGTTTG+CGG | + | 32576:12464-12483 | MS.gene035350:intron | 40.0% | |
| GAGGGTTGTTTGGATATTGA+GGG | - | 32576:11140-11159 | MS.gene035350:intergenic | 40.0% | |
| GATATGGAAGGACCTTCATT+GGG | + | 32576:13194-13213 | MS.gene035350:CDS | 40.0% | |
| GCTATGGACTTCAAACTTCT+TGG | + | 32576:12346-12365 | MS.gene035350:CDS | 40.0% | |
| GGCATATAGGTCACAATACT+TGG | + | 32576:13936-13955 | MS.gene035350:intron | 40.0% | |
| GGTGGTTGGATCATTGTTAT+CGG | - | 32576:11223-11242 | MS.gene035350:intergenic | 40.0% | |
| GTTCCCATAAAGATATGCCA+AGG | - | 32576:12079-12098 | MS.gene035350:intergenic | 40.0% | |
| GTTGTTATCTGAATGGTAGC+AGG | - | 32576:13330-13349 | MS.gene035350:intergenic | 40.0% | |
| TACTGACCTCTAATGATCTG+TGG | + | 32576:12723-12742 | MS.gene035350:CDS | 40.0% | |
| TCAGATGCTTCTTAGTCAGA+GGG | + | 32576:14047-14066 | MS.gene035350:intron | 40.0% | |
| TCCATATCACAAGGATACGA+TGG | - | 32576:13182-13201 | MS.gene035350:intergenic | 40.0% | |
| TCCATCGTATCCTTGTGATA+TGG | + | 32576:13178-13197 | MS.gene035350:CDS | 40.0% | |
| TCGTATCCTTGTGATATGGA+AGG | + | 32576:13182-13201 | MS.gene035350:CDS | 40.0% | |
| TCTGATAACACCAAGGGAAA+AGG | + | 32576:12960-12979 | MS.gene035350:CDS | 40.0% | |
| TGATATGGAAGGACCTTCAT+TGG | + | 32576:13193-13212 | MS.gene035350:CDS | 40.0% | |
| TGATTCAGGAACATGCTTCA+TGG | + | 32576:11973-11992 | MS.gene035350:intron | 40.0% | |
| TTATCGGAATGGTGAGATGA+TGG | - | 32576:11207-11226 | MS.gene035350:intergenic | 40.0% | |
| TTCAGATGCTTCTTAGTCAG+AGG | + | 32576:14046-14065 | MS.gene035350:intron | 40.0% | |
| TTCTTGTATGTAAGATCCGG+TGG | - | 32576:14166-14185 | MS.gene035350:intergenic | 40.0% | |
| TTTGCGGAGAACCAAGATTA+TGG | + | 32576:12480-12499 | MS.gene035350:CDS | 40.0% | |
| ! | AAGGGAAAAGGTATAGCTGA+TGG | + | 32576:12972-12991 | MS.gene035350:CDS | 40.0% |
| ! | ATCAGCTATACCTTTTCCCT+TGG | - | 32576:12973-12992 | MS.gene035350:intergenic | 40.0% |
| ! | ATGGATTGACAGCTTTAGTC+GGG | + | 32576:14475-14494 | MS.gene035350:CDS | 40.0% |
| ! | ATGGCTCTTTTAGACCTGTA+CGG | + | 32576:14256-14275 | MS.gene035350:CDS | 40.0% |
| ! | CTTTCGTTTTCCCCCTTAAA+AGG | + | 32576:13740-13759 | MS.gene035350:intron | 40.0% |
| ! | GGATACGATGGATTCAAGTT+TGG | - | 32576:13170-13189 | MS.gene035350:intergenic | 40.0% |
| ! | TGACCTGTTTTCTGCCTATA+TGG | - | 32576:13463-13482 | MS.gene035350:intergenic | 40.0% |
| !! | AGATGTTGGAAACTGACTTG+GGG | + | 32576:13006-13025 | MS.gene035350:CDS | 40.0% |
| !! | CATGTTAGAGGTGCTATTGA+TGG | + | 32576:14282-14301 | MS.gene035350:CDS | 40.0% |
| !! | CCTAACCTTTTAGTTGAGCT+TGG | + | 32576:13068-13087 | MS.gene035350:CDS | 40.0% |
| !! | CTTGCTTCATTTGGTGGTTT+TGG | + | 32576:12596-12615 | MS.gene035350:intron | 40.0% |
| !! | GATGGATTGACAGCTTTAGT+CGG | + | 32576:14474-14493 | MS.gene035350:CDS | 40.0% |
| !! | GGAGGAAAACGAAAAGTGTT+AGG | - | 32576:13850-13869 | MS.gene035350:intergenic | 40.0% |
| !! | TGGCCTTTATTTGGGTTTTG+TGG | + | 32576:12779-12798 | MS.gene035350:intron | 40.0% |
| AAATGATGGTCTATGGCTGC+AGG | + | 32576:13634-13653 | MS.gene035350:CDS | 45.0% | |
| AATGGGGCTATACAAGCATC+TGG | - | 32576:12390-12409 | MS.gene035350:intergenic | 45.0% | |
| ACATACCTGAAGGTCGAGAA+AGG | - | 32576:12151-12170 | MS.gene035350:intergenic | 45.0% | |
| ACTTACCGCTTCTCTTCACA+GGG | - | 32576:12752-12771 | MS.gene035350:intergenic | 45.0% | |
| AGCGTGTTAGAACTGCTTGT+TGG | + | 32576:12514-12533 | MS.gene035350:CDS | 45.0% | |
| ATGGAACCCCTTTGCTTTCA+TGG | + | 32576:13432-13451 | MS.gene035350:CDS | 45.0% | |
| CAAGTGCTTGCTTCATTTGG+TGG | + | 32576:12590-12609 | MS.gene035350:intron | 45.0% | |
| CACCAAATGAAGCAAGCACT+TGG | - | 32576:12592-12611 | MS.gene035350:intergenic | 45.0% | |
| CATAACAATATACCTGGGGG+TGG | + | 32576:14192-14211 | MS.gene035350:CDS | 45.0% | |
| CCCCATGAATGCCATAATCT+TGG | - | 32576:12494-12513 | MS.gene035350:intergenic | 45.0% | |
| GAAGGTCCTTCCATATCACA+AGG | - | 32576:13191-13210 | MS.gene035350:intergenic | 45.0% | |
| GAGACGATGAAGGTGATAAG+TGG | - | 32576:11355-11374 | MS.gene035350:intergenic | 45.0% | |
| GCGTGTTAGAACTGCTTGTT+GGG | + | 32576:12515-12534 | MS.gene035350:CDS | 45.0% | |
| GGAGGGTTGTTTGGATATTG+AGG | - | 32576:11141-11160 | MS.gene035350:intergenic | 45.0% | |
| GGGTATCCACAGATCATTAG+AGG | - | 32576:12732-12751 | MS.gene035350:intergenic | 45.0% | |
| GTTGAGCTTGGAGATTCAGA+AGG | + | 32576:13080-13099 | MS.gene035350:CDS | 45.0% | |
| GTTGTGTGGGACTGTTTACT+AGG | + | 32576:12455-12474 | MS.gene035350:intron | 45.0% | |
| TATATATTTCCACCACCCCC+AGG | - | 32576:14207-14226 | MS.gene035350:intergenic | 45.0% | |
| TCCAGTGAATGGGGAAGATA+TGG | + | 32576:13413-13432 | MS.gene035350:CDS | 45.0% | |
| TCCATATCTTCCCCATTCAC+TGG | - | 32576:13417-13436 | MS.gene035350:intergenic | 45.0% | |
| TCTCCCGCAGTTCATATTTC+AGG | + | 32576:11379-11398 | MS.gene035350:CDS | 45.0% | |
| TGAAATATGAACTGCGGGAG+AGG | - | 32576:11380-11399 | MS.gene035350:intergenic | 45.0% | |
| TGGAACCCCTTTGCTTTCAT+GGG | + | 32576:13433-13452 | MS.gene035350:CDS | 45.0% | |
| TGGAGTTGAGAGAGGTAACA+AGG | + | 32576:12562-12581 | MS.gene035350:intron | 45.0% | |
| TGGCCATATAGGCAGAAAAC+AGG | + | 32576:13457-13476 | MS.gene035350:CDS | 45.0% | |
| TGGCTGCACTAACAAGATGT+TGG | + | 32576:12992-13011 | MS.gene035350:CDS | 45.0% | |
| TTCATTGTCTGATCCAGACG+GGG | + | 32576:13220-13239 | MS.gene035350:CDS | 45.0% | |
| TTTCTGTTGCCAACGCCAAA+TGG | - | 32576:14387-14406 | MS.gene035350:intergenic | 45.0% | |
| ! | AGCAAGTTGAACCCGTTGAT+TGG | - | 32576:13132-13151 | MS.gene035350:intergenic | 45.0% |
| ! | ATCGAGAGCACGTAATTCAG+CGG | - | 32576:11244-11263 | MS.gene035350:intergenic | 45.0% |
| ! | CGTGTTAGAACTGCTTGTTG+GGG | + | 32576:12516-12535 | MS.gene035350:CDS | 45.0% |
| ! | GGGTCAGTTATTGGTTGTGT+GGG | + | 32576:12442-12461 | MS.gene035350:intron | 45.0% |
| ! | TGGCAACATTCACTTGTTGC+AGG | + | 32576:12664-12683 | MS.gene035350:intron | 45.0% |
| ! | TGGCTCTTTTAGACCTGTAC+GGG | + | 32576:14257-14276 | MS.gene035350:CDS | 45.0% |
| ! | TGGGTCAGTTATTGGTTGTG+TGG | + | 32576:12441-12460 | MS.gene035350:intron | 45.0% |
| ! | TGTTATGTTGAGGTGCCTCT+TGG | + | 32576:13254-13273 | MS.gene035350:CDS | 45.0% |
| !! | ACTACTGGAGTGGGTATTGA+AGG | + | 32576:13287-13306 | MS.gene035350:CDS | 45.0% |
| !! | ATTGATGGGCTTGCAGGTAT+TGG | + | 32576:14297-14316 | MS.gene035350:CDS | 45.0% |
| !! | ATTGGCTTTCCACACATTCC+TGG | + | 32576:12863-12882 | MS.gene035350:CDS | 45.0% |
| !! | CACTTTTTGCCAGGAATGTG+TGG | - | 32576:12875-12894 | MS.gene035350:intergenic | 45.0% |
| !! | CTACTGGAGTGGGTATTGAA+GGG | + | 32576:13288-13307 | MS.gene035350:CDS | 45.0% |
| !! | GTCTTTTCTCGTGTGCCATT+TGG | + | 32576:14369-14388 | MS.gene035350:CDS | 45.0% |
| AACAATATACCTGGGGGTGG+TGG | + | 32576:14195-14214 | MS.gene035350:CDS | 50.0% | |
| AATGGAGACCTGTCTGGAGA+TGG | + | 32576:14456-14475 | MS.gene035350:CDS | 50.0% | |
| CACTTACCGCTTCTCTTCAC+AGG | - | 32576:12753-12772 | MS.gene035350:intergenic | 50.0% | |
| CATCCTGCACATGGAATTCC+TGG | + | 32576:12912-12931 | MS.gene035350:CDS | 50.0% | |
| CCTCTAACATGTACCCGTAC+AGG | - | 32576:14273-14292 | MS.gene035350:intergenic | 50.0% | |
| CCTGTACGGGTACATGTTAG+AGG | + | 32576:14270-14289 | MS.gene035350:CDS | 50.0% | |
| CGAGGCTATTGCAATTGCCT+TGG | + | 32576:12059-12078 | MS.gene035350:CDS | 50.0% | |
| CTGAAGGTCGAGAAAGGAAG+CGG | - | 32576:12145-12164 | MS.gene035350:intergenic | 50.0% | |
| CTGTCAATCCATCTCCAGAC+AGG | - | 32576:14467-14486 | MS.gene035350:intergenic | 50.0% | |
| CTTTCATGGGGTGGCCATAT+AGG | + | 32576:13446-13465 | MS.gene035350:CDS | 50.0% | |
| GAACCAGGAATTCCATGTGC+AGG | - | 32576:12918-12937 | MS.gene035350:intergenic | 50.0% | |
| GATCACAATGGAGACCTGTC+TGG | + | 32576:14450-14469 | MS.gene035350:CDS | 50.0% | |
| GCTGGAACAACTACTGGAGT+GGG | + | 32576:13278-13297 | MS.gene035350:CDS | 50.0% | |
| GGAACCCCTTTGCTTTCATG+GGG | + | 32576:13434-13453 | MS.gene035350:CDS | 50.0% | |
| GGATACCCTGTGAAGAGAAG+CGG | + | 32576:12744-12763 | MS.gene035350:CDS | 50.0% | |
| GTAGTTGTTCCAGCACCAAG+AGG | - | 32576:13272-13291 | MS.gene035350:intergenic | 50.0% | |
| TAGCAGGATCCTTCCTCAGA+AGG | - | 32576:13314-13333 | MS.gene035350:intergenic | 50.0% | |
| TATTCAGGGGAACGGAAGAG+TGG | - | 32576:11493-11512 | MS.gene035350:intergenic | 50.0% | |
| TGCTGGAACAACTACTGGAG+TGG | + | 32576:13277-13296 | MS.gene035350:CDS | 50.0% | |
| TGGGCTCACTTCCAGTGAAT+GGG | + | 32576:13403-13422 | MS.gene035350:CDS | 50.0% | |
| ! | AGATGATGGCTGCTTGGGAA+TGG | - | 32576:11193-11212 | MS.gene035350:intergenic | 50.0% |
| ! | ATGGTGAGATGATGGCTGCT+TGG | - | 32576:11199-11218 | MS.gene035350:intergenic | 50.0% |
| ! | ATTGAAGGGCCTTCTGAGGA+AGG | + | 32576:13302-13321 | MS.gene035350:CDS | 50.0% |
| ! | CATCATTGGCTGCAGACTGA+GGG | - | 32576:14413-14432 | MS.gene035350:intergenic | 50.0% |
| ! | GAAGCACGTGCTGATCACAA+TGG | + | 32576:14438-14457 | MS.gene035350:CDS | 50.0% |
| ! | TCATCATTGGCTGCAGACTG+AGG | - | 32576:14414-14433 | MS.gene035350:intergenic | 50.0% |
| ! | TGGTGAGATGATGGCTGCTT+GGG | - | 32576:11198-11217 | MS.gene035350:intergenic | 50.0% |
| !! | CTTGGTGCTGGAACAACTAC+TGG | + | 32576:13272-13291 | MS.gene035350:CDS | 50.0% |
| !! | GGAATTCCTGGTTCTGAGTC+TGG | + | 32576:12924-12943 | MS.gene035350:CDS | 50.0% |
| !! | TGCAGTGAGCACTTTTTGCC+AGG | - | 32576:12884-12903 | MS.gene035350:intergenic | 50.0% |
| ACCCCTTTGCTTTCATGGGG+TGG | + | 32576:13437-13456 | MS.gene035350:CDS | 55.0% | |
| CAGGGTCACAATAGCAGCAC+TGG | - | 32576:12013-12032 | MS.gene035350:intergenic | 55.0% | |
| CAGGTCAAAGCTCATCCCAG+AGG | + | 32576:13476-13495 | MS.gene035350:CDS | 55.0% | |
| CATGATGTTCTCACCCCGTC+TGG | - | 32576:13236-13255 | MS.gene035350:intergenic | 55.0% | |
| CCAGTTCCAGACTCAGAACC+AGG | - | 32576:12933-12952 | MS.gene035350:intergenic | 55.0% | |
| CGCTTCCTTTCTCGACCTTC+AGG | + | 32576:12143-12162 | MS.gene035350:CDS | 55.0% | |
| GATGGTCTATGGCTGCAGGT+TGG | + | 32576:13638-13657 | MS.gene035350:intron | 55.0% | |
| GCACGTAATTCAGCGGTGGT+TGG | - | 32576:11237-11256 | MS.gene035350:intergenic | 55.0% | |
| GCCACCCCATGAAAGCAAAG+GGG | - | 32576:13441-13460 | MS.gene035350:intergenic | 55.0% | |
| GGAACATGCTTCATGGTCCC+TGG | + | 32576:11980-11999 | MS.gene035350:intron | 55.0% | |
| GGCCACCCCATGAAAGCAAA+GGG | - | 32576:13442-13461 | MS.gene035350:intergenic | 55.0% | |
| GGCTACCTCTGTCAAAGTGG+CGG | + | 32576:12537-12556 | MS.gene035350:CDS | 55.0% | |
| GGGAGAGGATGAGACGATGA+AGG | - | 32576:11365-11384 | MS.gene035350:intergenic | 55.0% | |
| GGGCTCACTTCCAGTGAATG+GGG | + | 32576:13404-13423 | MS.gene035350:CDS | 55.0% | |
| GGTGAAGGAGGAGGGTTGTT+TGG | - | 32576:11150-11169 | MS.gene035350:intergenic | 55.0% | |
| GGTGATAGGGTGAAGGAGGA+GGG | - | 32576:11158-11177 | MS.gene035350:intergenic | 55.0% | |
| GTGGGCTCACTTCCAGTGAA+TGG | + | 32576:13402-13421 | MS.gene035350:CDS | 55.0% | |
| TGGCCACCCCATGAAAGCAA+AGG | - | 32576:13443-13462 | MS.gene035350:intergenic | 55.0% | |
| TGGGGCTACCTCTGTCAAAG+TGG | + | 32576:12534-12553 | MS.gene035350:CDS | 55.0% | |
| TGGTGATAGGGTGAAGGAGG+AGG | - | 32576:11159-11178 | MS.gene035350:intergenic | 55.0% | |
| ! | GAGAGCACGTAATTCAGCGG+TGG | - | 32576:11241-11260 | MS.gene035350:intergenic | 55.0% |
| !! | AGCAGCACTGGCTTCTTTCC+AGG | - | 32576:12001-12020 | MS.gene035350:intergenic | 55.0% |
| !! | CCTGGTTCTGAGTCTGGAAC+TGG | + | 32576:12930-12949 | MS.gene035350:CDS | 55.0% |
| !! | CGTTGGTGATAGGGTGAAGG+AGG | - | 32576:11162-11181 | MS.gene035350:intergenic | 55.0% |
| !! | CTGCGTTGGTGATAGGGTGA+AGG | - | 32576:11165-11184 | MS.gene035350:intergenic | 55.0% |
| !! | GAAGCGCTGCGTTGGTGATA+GGG | - | 32576:11171-11190 | MS.gene035350:intergenic | 55.0% |
| !! | GCAGCACTGGCTTCTTTCCA+GGG | - | 32576:12000-12019 | MS.gene035350:intergenic | 55.0% |
| !! | GGGTATTGAAGGGCCTTCTG+AGG | + | 32576:13298-13317 | MS.gene035350:CDS | 55.0% |
| !! | GGTGCTATTGATGGGCTTGC+AGG | + | 32576:14291-14310 | MS.gene035350:CDS | 55.0% |
| !! | TCTCGTGTGCCATTTGGCGT+TGG | + | 32576:14375-14394 | MS.gene035350:CDS | 55.0% |
| CATGTTCGCAGAGGGAAGCG+AGG | - | 32576:11272-11291 | MS.gene035350:intergenic | 60.0% | |
| CCTCTGTCAAAGTGGCGGCA+TGG | + | 32576:12542-12561 | MS.gene035350:CDS | 60.0% | |
| CGAGAAAGGAAGCGGCAGCA+AGG | - | 32576:12137-12156 | MS.gene035350:intergenic | 60.0% | |
| TGGCGGCATGGAGTTGAGAG+AGG | + | 32576:12554-12573 | MS.gene035350:CDS | 60.0% | |
| ! | CCATGCCGCCACTTTGACAG+AGG | - | 32576:12545-12564 | MS.gene035350:intergenic | 60.0% |
| ! | GTTGAGGTGCCTCTTGGTGC+TGG | + | 32576:13260-13279 | MS.gene035350:CDS | 60.0% |
| !! | GGAAGCGCTGCGTTGGTGAT+AGG | - | 32576:11172-11191 | MS.gene035350:intergenic | 60.0% |
| !! | TGGGAATGGAAGCGCTGCGT+TGG | - | 32576:11179-11198 | MS.gene035350:intergenic | 60.0% |
| GTAGGAGGTGAAGCCGCTGC+AGG | - | 32576:14342-14361 | MS.gene035350:intergenic | 65.0% | |
| !! | GGGCTTGCAGGTATTGGCCG+TGG | + | 32576:14303-14322 | MS.gene035350:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 32576 | gene | 11129 | 14502 | 11129 | ID=MS.gene035350 |
| 32576 | mRNA | 11129 | 14502 | 11129 | ID=MS.gene035350.t1;Parent=MS.gene035350 |
| 32576 | exon | 11129 | 11400 | 11129 | ID=MS.gene035350.t1.exon1;Parent=MS.gene035350.t1 |
| 32576 | CDS | 11129 | 11400 | 11129 | ID=cds.MS.gene035350.t1;Parent=MS.gene035350.t1 |
| 32576 | exon | 11981 | 12164 | 11981 | ID=MS.gene035350.t1.exon2;Parent=MS.gene035350.t1 |
| 32576 | CDS | 11981 | 12164 | 11981 | ID=cds.MS.gene035350.t1;Parent=MS.gene035350.t1 |
| 32576 | exon | 12308 | 12376 | 12308 | ID=MS.gene035350.t1.exon3;Parent=MS.gene035350.t1 |
| 32576 | CDS | 12308 | 12376 | 12308 | ID=cds.MS.gene035350.t1;Parent=MS.gene035350.t1 |
| 32576 | exon | 12477 | 12575 | 12477 | ID=MS.gene035350.t1.exon4;Parent=MS.gene035350.t1 |
| 32576 | CDS | 12477 | 12575 | 12477 | ID=cds.MS.gene035350.t1;Parent=MS.gene035350.t1 |
| 32576 | exon | 12686 | 12765 | 12686 | ID=MS.gene035350.t1.exon5;Parent=MS.gene035350.t1 |
| 32576 | CDS | 12686 | 12765 | 12686 | ID=cds.MS.gene035350.t1;Parent=MS.gene035350.t1 |
| 32576 | exon | 12857 | 13655 | 12857 | ID=MS.gene035350.t1.exon6;Parent=MS.gene035350.t1 |
| 32576 | CDS | 12857 | 13655 | 12857 | ID=cds.MS.gene035350.t1;Parent=MS.gene035350.t1 |
| 32576 | exon | 14051 | 14502 | 14051 | ID=MS.gene035350.t1.exon7;Parent=MS.gene035350.t1 |
| 32576 | CDS | 14051 | 14502 | 14051 | ID=cds.MS.gene035350.t1;Parent=MS.gene035350.t1 |
| Gene Sequence |
| Protein sequence |
