AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene035537

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene035537.t1 MTR_8g070075 88.163 735 80 2 1 734 30 758 0.0 1336
MS.gene035537.t1 MTR_8g070070 75.472 742 157 8 5 736 41 767 0.0 1101
MS.gene035537.t1 MTR_8g071030 65.295 729 202 7 13 736 65 747 0.0 940
MS.gene035537.t1 MTR_1g035420 67.585 472 149 3 266 736 189 657 0.0 676
MS.gene035537.t1 MTR_1g035400 60.645 465 180 3 266 729 106 568 0.0 588
MS.gene035537.t1 MTR_6g044690 56.383 470 182 8 266 726 109 564 0.0 533
MS.gene035537.t1 MTR_0376s0030 51.172 512 223 8 238 736 79 576 6.13e-177 518
MS.gene035537.t1 MTR_6g043960 47.500 520 223 10 219 726 1 482 1.90e-156 462
MS.gene035537.t1 MTR_2g054460 43.463 566 202 12 170 726 8 464 2.91e-138 415
MS.gene035537.t1 MTR_5g013420 40.476 462 248 9 269 724 618 1058 2.14e-104 344
MS.gene035537.t1 MTR_5g013420 40.476 462 248 9 269 724 618 1058 2.63e-104 344
MS.gene035537.t1 MTR_7g088370 40.546 476 247 13 261 726 231 680 1.05e-103 333
MS.gene035537.t1 MTR_3g011440 39.362 470 265 10 266 725 174 633 4.65e-102 328
MS.gene035537.t1 MTR_4g010830 40.393 458 253 8 269 724 510 949 9.59e-101 332
MS.gene035537.t1 MTR_8g042750 39.246 451 252 11 286 726 220 658 2.30e-97 316
MS.gene035537.t1 MTR_4g010550 37.473 459 235 11 269 724 24 433 1.34e-86 281
MS.gene035537.t1 MTR_7g084090 37.166 487 274 15 260 725 252 727 3.80e-86 288
MS.gene035537.t1 MTR_6g061270 37.131 474 266 16 272 725 203 664 5.22e-84 281
MS.gene035537.t1 MTR_6g061200 36.052 466 253 16 272 725 203 635 1.53e-76 260
MS.gene035537.t1 MTR_7g084090 39.295 369 202 12 260 615 252 611 6.13e-69 239
MS.gene035537.t1 MTR_7g445710 32.353 476 229 17 269 724 110 512 5.99e-57 203
MS.gene035537.t1 MTR_7g445530 32.143 476 230 17 269 724 110 512 8.93e-57 202
MS.gene035537.t1 MTR_1g048950 33.333 474 267 13 266 724 68 507 1.39e-55 200
MS.gene035537.t1 MTR_7g450730 30.952 462 219 14 269 724 107 474 2.18e-53 192
MS.gene035537.t1 MTR_7g052480 33.117 308 192 8 428 725 223 526 6.42e-43 164
MS.gene035537.t1 MTR_7g445600 34.000 150 62 2 575 724 243 355 5.13e-21 95.9
MS.gene035537.t1 MTR_7g445600 41.860 129 61 5 269 397 106 220 4.08e-15 78.2
MS.gene035537.t1 MTR_8g078505 25.826 333 194 10 423 724 205 515 2.06e-20 95.9
MS.gene035537.t1 MTR_6g044000 69.811 53 16 0 674 726 117 169 4.21e-20 88.6
MS.gene035537.t1 MTR_6g044000 36.290 124 71 2 219 338 1 120 1.54e-16 78.6
MS.gene035537.t1 MTR_8g078490 31.217 189 110 4 541 724 1056 1229 4.01e-19 93.2
MS.gene035537.t1 MTR_1g069570 25.733 307 156 12 476 726 430 720 8.01e-19 91.7
MS.gene035537.t1 MTR_5g018850 27.797 295 161 11 468 724 1203 1483 3.25e-18 90.5
MS.gene035537.t1 MTR_4g132610 30.270 185 115 4 542 724 851 1023 4.91e-18 89.7
MS.gene035537.t1 MTR_1g080340 24.756 307 160 11 476 726 269 560 1.01e-16 84.7
MS.gene035537.t1 MTR_5g098680 34.810 158 89 4 294 446 267 415 1.77e-14 77.8
MS.gene035537.t1 MTR_7g445810 39.375 160 78 8 269 425 123 266 3.81e-14 73.9
MS.gene035537.t1 MTR_8g102580 34.177 158 90 4 294 446 261 409 6.53e-14 75.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene035537.t1 AT4G13460 61.414 495 179 7 244 736 164 648 0.0 618
MS.gene035537.t1 AT4G13460 61.414 495 179 7 244 736 164 648 0.0 618
MS.gene035537.t1 AT2G33290 59.167 480 186 5 258 736 179 649 0.0 591
MS.gene035537.t1 AT2G33290 59.167 480 186 5 258 736 179 649 0.0 591
MS.gene035537.t1 AT2G33290 59.167 480 186 5 258 736 179 649 0.0 591
MS.gene035537.t1 AT2G33290 59.167 480 186 5 258 736 179 649 0.0 591
MS.gene035537.t1 AT2G35160 37.660 470 249 10 259 724 298 727 7.74e-91 300
MS.gene035537.t1 AT5G04940 39.262 461 233 14 286 726 207 640 1.86e-90 297
MS.gene035537.t1 AT5G04940 39.262 461 233 14 286 726 207 640 1.86e-90 297
MS.gene035537.t1 AT2G35160 37.660 470 249 10 259 724 334 763 2.66e-90 300
MS.gene035537.t1 AT2G35160 37.660 470 249 10 259 724 334 763 2.66e-90 300
MS.gene035537.t1 AT2G35160 37.660 470 249 10 259 724 334 763 2.66e-90 300
MS.gene035537.t1 AT2G35160 37.660 470 249 10 259 724 334 763 2.66e-90 300
MS.gene035537.t1 AT1G73100 37.391 460 245 12 286 726 204 639 3.61e-90 296
MS.gene035537.t1 AT2G22740 37.053 475 276 8 259 724 299 759 9.49e-89 296
MS.gene035537.t1 AT2G22740 37.053 475 276 8 259 724 299 759 9.49e-89 296
MS.gene035537.t1 AT5G13960 36.087 460 264 14 286 725 11 460 1.61e-81 268
MS.gene035537.t1 AT5G13960 36.087 460 264 15 286 725 145 594 2.44e-81 272
MS.gene035537.t1 AT2G24740 36.784 454 237 17 287 726 307 724 6.36e-69 241
MS.gene035537.t1 AT1G17770 33.406 461 265 15 286 726 223 661 2.08e-68 238
MS.gene035537.t1 AT5G47150 42.424 165 86 4 282 446 169 324 8.06e-27 112
MS.gene035537.t1 AT5G47160 40.588 170 91 5 274 442 247 407 1.96e-23 103
MS.gene035537.t1 AT5G47160 40.588 170 91 5 274 442 247 407 1.96e-23 103
MS.gene035537.t1 AT5G47160 40.588 170 91 5 274 442 247 407 1.96e-23 103
MS.gene035537.t1 AT2G23740 32.308 195 109 6 543 729 1184 1363 5.11e-22 102
MS.gene035537.t1 AT2G23740 32.308 195 109 6 543 729 1184 1363 5.11e-22 102
MS.gene035537.t1 AT2G23740 32.308 195 109 6 543 729 1184 1363 5.11e-22 102
MS.gene035537.t1 AT2G23740 32.308 195 109 6 543 729 1177 1356 5.19e-22 102
MS.gene035537.t1 AT2G05900 36.364 198 115 7 309 504 3 191 3.95e-21 95.5
MS.gene035537.t1 AT3G03750 28.521 284 145 12 474 725 66 323 2.78e-18 87.8
MS.gene035537.t1 AT2G23740 32.877 146 78 5 543 683 1184 1314 3.51e-16 83.6
MS.gene035537.t1 AT2G23740 32.877 146 78 5 543 683 1184 1314 3.51e-16 83.6
MS.gene035537.t1 AT1G57820 34.591 159 89 5 294 446 277 426 4.71e-14 76.3
MS.gene035537.t1 AT1G57820 34.591 159 89 5 294 446 277 426 4.71e-14 76.3
MS.gene035537.t1 AT1G57820 33.974 156 91 5 294 446 277 423 5.14e-13 73.2
MS.gene035537.t1 AT1G66050 32.075 159 93 4 294 446 262 411 5.88e-12 69.7
MS.gene035537.t1 AT1G66040 32.075 159 93 4 294 446 262 411 6.02e-12 69.7
MS.gene035537.t1 AT5G39550 33.333 159 91 5 294 446 262 411 8.38e-12 68.9

Find 197 sgRNAs with CRISPR-Local

Find 237 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTAGGGAGATTAAGAAAAT+TGG 0.151275 1.1:-37634539 MS.gene035537:CDS
TCCTCAAAAGGTTTAGGTTT+TGG 0.199470 1.1:+37635841 None:intergenic
AAGCGGTGCTCCGGTGTAAA+TGG 0.221260 1.1:+37635879 None:intergenic
TGATTCTTGTTTCTTTGAAA+TGG 0.265370 1.1:+37635504 None:intergenic
TGTTTCTGAAGTTGCGATTA+TGG 0.271621 1.1:-37635230 MS.gene035537:CDS
TACGTCTTTGGATCTTATTC+AGG 0.280560 1.1:-37634120 MS.gene035537:CDS
AAGCAAACCCTGAAGATTAT+AGG 0.291078 1.1:+37634277 None:intergenic
AAGAAATCCTCAAAAGGTTT+AGG 0.291529 1.1:+37635835 None:intergenic
AATTATTGAGGAGAAGAAAT+TGG 0.298748 1.1:-37635323 MS.gene035537:CDS
AGAGTTTCCCTATAATCTTC+AGG 0.299770 1.1:-37634285 MS.gene035537:CDS
GGTAGCTATGGTTAAGAAAA+AGG 0.309499 1.1:-37635473 MS.gene035537:CDS
TATGGTTGCATCGCGATAAA+AGG 0.310327 1.1:-37635069 MS.gene035537:CDS
CATCTATCTATAAACCGTTT+TGG 0.314837 1.1:+37634008 None:intergenic
AGCTTGCCCGCCCACTCGTC+AGG 0.315436 1.1:+37633729 None:intergenic
TGCAACACGATTCCGACAAT+TGG 0.331483 1.1:+37634202 None:intergenic
CAGGTCTGCGCAAACTGGTT+GGG 0.335408 1.1:-37634147 MS.gene035537:CDS
ATACATTTGGACTCCAACTA+TGG 0.339033 1.1:+37633862 None:intergenic
TTGGGAGGACAAGAGCAAAA+AGG 0.339571 1.1:+37634221 None:intergenic
GGTGTAAATGGGAGTGATTT+GGG 0.344967 1.1:+37635891 None:intergenic
AGAGGCAGCAACAGGGGTGG+AGG 0.348478 1.1:-37635173 MS.gene035537:CDS
CGGTGTAAATGGGAGTGATT+TGG 0.348980 1.1:+37635890 None:intergenic
ATGTGGTTATGAGGATGATA+TGG 0.351380 1.1:-37634885 MS.gene035537:CDS
TATATAGGATTACTGATTGC+TGG 0.364491 1.1:-37634655 MS.gene035537:CDS
ACCTGATATAGATTATTCTA+TGG 0.365689 1.1:-37633922 MS.gene035537:CDS
AGCAAACCCTGAAGATTATA+GGG 0.370075 1.1:+37634278 None:intergenic
CAAAACGGTTTATAGATAGA+TGG 0.370356 1.1:-37634007 MS.gene035537:CDS
ACAAATTGAACAAATACATT+TGG 0.370419 1.1:+37633849 None:intergenic
CCCGGTATACTCGCAGATAA+AGG 0.370510 1.1:+37634091 None:intergenic
ATGTTTATGATGGATTATAT+AGG 0.373190 1.1:-37634670 MS.gene035537:CDS
TCCATAGAATAATCTATATC+AGG 0.373576 1.1:+37633921 None:intergenic
GGCAGCAACAGGGGTGGAGG+GGG 0.379343 1.1:-37635170 MS.gene035537:CDS
ATGGTGGAATTATGTGTAAT+TGG 0.382160 1.1:-37634998 MS.gene035537:CDS
TATAGATAGATGGGCAGAAT+GGG 0.382516 1.1:-37633997 MS.gene035537:CDS
AGGCAGCAACAGGGGTGGAG+GGG 0.384511 1.1:-37635171 MS.gene035537:CDS
ATGTCATTAAATAGCCTAAC+AGG 0.384989 1.1:+37634455 None:intergenic
GATTCTTGTTTCTTTGAAAT+GGG 0.385503 1.1:+37635505 None:intergenic
CTAGGGAGATTAAGAAAATT+GGG 0.390286 1.1:-37634538 MS.gene035537:CDS
TGGTTGGGGAGTTACGTCTT+TGG 0.391653 1.1:-37634132 MS.gene035537:CDS
AACATGGAAGAGGCAGCAAC+AGG 0.393510 1.1:-37635181 MS.gene035537:CDS
TGGGAGTGATTTGGGGATTG+AGG 0.396090 1.1:+37635899 None:intergenic
AGCATAGGTTGGAAGTGTTC+AGG 0.397659 1.1:-37634166 MS.gene035537:CDS
ATCATAGTCGTGGTTTCATA+AGG 0.402492 1.1:-37635120 MS.gene035537:CDS
TCGGAATCGTGTTGCACAAA+AGG 0.405257 1.1:-37634195 MS.gene035537:CDS
GCTCTTGTCCTCCCAATTGT+CGG 0.405346 1.1:-37634214 MS.gene035537:CDS
GCATTACGGGATCGAGATTA+GGG 0.408510 1.1:-37634744 MS.gene035537:CDS
GGGAGTGATTTGGGGATTGA+GGG 0.409415 1.1:+37635900 None:intergenic
GGTAAGGTTTATGTTTATGA+TGG 0.410667 1.1:-37634680 MS.gene035537:CDS
CGCGATGCAACCATAACTTT+CGG 0.415089 1.1:+37635077 None:intergenic
TCAACATTGCGAAATGTTGC+TGG 0.416135 1.1:-37633894 MS.gene035537:CDS
GCTTGTGAAAGGGAAGCCTT+TGG 0.419411 1.1:-37634258 MS.gene035537:CDS
AAAATGATAAAGGGATTTAT+CGG 0.421885 1.1:+37635663 None:intergenic
TGCATTACGGGATCGAGATT+AGG 0.423214 1.1:-37634745 MS.gene035537:CDS
GGCAGTGAAGAGATTGGTTG+AGG 0.423218 1.1:-37635281 MS.gene035537:CDS
TTATGAGGATGATATGGAAT+TGG 0.423427 1.1:-37634879 MS.gene035537:CDS
AGAGGGTGGAAACCTTGCTT+TGG 0.427528 1.1:-37634777 MS.gene035537:CDS
TGAAGCGGCAAAAGCATTGT+TGG 0.430143 1.1:+37635624 None:intergenic
AATTGAGGGGCAAGCTAAGA+TGG 0.435322 1.1:-37634582 MS.gene035537:CDS
TATAAGTTATTGAGAATTGA+GGG 0.436671 1.1:-37634596 MS.gene035537:CDS
CGGAATCGTGTTGCACAAAA+GGG 0.437967 1.1:-37634194 MS.gene035537:CDS
GCCTTTATCTGCGAGTATAC+CGG 0.438710 1.1:-37634092 MS.gene035537:CDS
GATTGTTTCATGTGGTTATG+AGG 0.449177 1.1:-37634894 MS.gene035537:CDS
CCTTTATCTGCGAGTATACC+GGG 0.450373 1.1:-37634091 MS.gene035537:CDS
AGAGAACTCAGCATAGACTA+TGG 0.455539 1.1:-37633756 MS.gene035537:CDS
TTGGAGCGTAGTATGCATTA+CGG 0.455982 1.1:-37634758 MS.gene035537:CDS
GAGGCAGCAACAGGGGTGGA+GGG 0.460541 1.1:-37635172 MS.gene035537:CDS
TGGTTTGAAGAAGGGATGTC+TGG 0.461289 1.1:-37634635 MS.gene035537:CDS
TCAGGTATTAATTGATATGA+TGG 0.462483 1.1:+37633939 None:intergenic
GAGTTTCCCTATAATCTTCA+GGG 0.462595 1.1:-37634284 MS.gene035537:CDS
ATTGGTTGAGGAGAAGATGT+TGG 0.463349 1.1:-37635269 MS.gene035537:CDS
TGAAGTTGCGATTATGGAGA+TGG 0.466700 1.1:-37635224 MS.gene035537:CDS
AATCAACCTCATTTCCCTCC+TGG 0.471602 1.1:-37635757 MS.gene035537:CDS
ACAATCACACTAGTAGCAAT+TGG 0.471909 1.1:+37634911 None:intergenic
ACTGATTGCTGGTTTGAAGA+AGG 0.473748 1.1:-37634644 MS.gene035537:CDS
CATCGCGATAAAAGGATAGT+TGG 0.475915 1.1:-37635061 MS.gene035537:CDS
AGAGGGAGAATGTTCCTGTT+AGG 0.476652 1.1:-37634469 MS.gene035537:CDS
AGAAGATGTTGGATGAGGAT+AGG 0.479328 1.1:-37635258 MS.gene035537:CDS
TCAGGTCTGCGCAAACTGGT+TGG 0.479909 1.1:-37634148 MS.gene035537:CDS
AGTAGCAATTGGCTCGCCAT+TGG 0.481657 1.1:+37634922 None:intergenic
TAATGAAGGACCGAAAGTTA+TGG 0.481674 1.1:-37635087 MS.gene035537:CDS
CTTCAGGGTTTGCTTGTGAA+AGG 0.482699 1.1:-37634269 MS.gene035537:CDS
TCAGTCAATATTTCCGACCT+TGG 0.482765 1.1:-37635592 MS.gene035537:CDS
AGGTCTGCGCAAACTGGTTG+GGG 0.482929 1.1:-37634146 MS.gene035537:CDS
TGGAGCGTAGTATGCATTAC+GGG 0.484208 1.1:-37634757 MS.gene035537:CDS
CATCAGAGCGGGAAAGCTAC+TGG 0.485001 1.1:-37634365 MS.gene035537:CDS
GCAACACGATTCCGACAATT+GGG 0.485278 1.1:+37634203 None:intergenic
TGCGATTATGGAGATGGAGA+TGG 0.487265 1.1:-37635218 MS.gene035537:CDS
GTATAAGTTATTGAGAATTG+AGG 0.488542 1.1:-37634597 MS.gene035537:CDS
TCTTTGGATCTTATTCAGGC+TGG 0.491337 1.1:-37634116 MS.gene035537:CDS
GTGTTCAGGTCTGCGCAAAC+TGG 0.491340 1.1:-37634152 MS.gene035537:CDS
GGATGAGAAAAGAATTATTG+AGG 0.492648 1.1:-37635335 MS.gene035537:CDS
GGAGATTAAGAAAATTGGGT+TGG 0.494139 1.1:-37634534 MS.gene035537:CDS
TGTGGAGGCAGTGAAGAGAT+TGG 0.494725 1.1:-37635287 MS.gene035537:CDS
AATTCTTCTTTCTTCCTCCA+TGG 0.496188 1.1:+37634828 None:intergenic
AGCGGTGCTCCGGTGTAAAT+GGG 0.497581 1.1:+37635880 None:intergenic
ATCATGTTCGGCGGTAGCTA+TGG 0.497855 1.1:-37635485 MS.gene035537:CDS
AAACAACCTCATTTCCCTCA+TGG 0.500206 1.1:-37635793 MS.gene035537:CDS
AAAGAAACAAGAATCATGTT+CGG 0.500992 1.1:-37635497 MS.gene035537:CDS
GGATTTATCGGAAGTAGCAT+TGG 0.502335 1.1:+37635675 None:intergenic
TTCAGGGTTTGCTTGTGAAA+GGG 0.502624 1.1:-37634268 MS.gene035537:CDS
TATGGTTTGAAGCGGTGCTC+CGG 0.502918 1.1:+37635870 None:intergenic
CTTCTTTCTTCCTCCATGGC+CGG 0.504486 1.1:+37634832 None:intergenic
CTGATTGCTGGTTTGAAGAA+GGG 0.504895 1.1:-37634643 MS.gene035537:CDS
GGAAGATACTCATAATAAAG+AGG 0.506268 1.1:+37634416 None:intergenic
TGTGTGGAGGCTTGTACTGA+TGG 0.507598 1.1:-37634335 MS.gene035537:CDS
TAGATAGATGGGCAGAATGG+GGG 0.511424 1.1:-37633995 MS.gene035537:CDS
AGGATAGTTGGATCGATACC+TGG 0.518534 1.1:-37635049 MS.gene035537:CDS
GGCATCCCTGACGAGTGGGC+GGG 0.520972 1.1:-37633735 MS.gene035537:CDS
TTCGTGAGATGAAGTATGAA+GGG 0.522262 1.1:-37634718 MS.gene035537:CDS
ACTCGTTAATATATCCAAAA+CGG 0.524396 1.1:-37634022 MS.gene035537:CDS
GAGGATTTCTTCACCACCCA+AGG 0.525934 1.1:-37635823 MS.gene035537:CDS
TAGGGTTCTGATTTAGTCCA+AGG 0.527023 1.1:+37635575 None:intergenic
GCGATTATGGAGATGGAGAT+GGG 0.528244 1.1:-37635217 MS.gene035537:CDS
TCATAGTCGTGGTTTCATAA+GGG 0.531523 1.1:-37635119 MS.gene035537:CDS
ATGGAGATGGAGATGGGAGC+TGG 0.532864 1.1:-37635211 MS.gene035537:CDS
TTATAGATAGATGGGCAGAA+TGG 0.533260 1.1:-37633998 MS.gene035537:CDS
GTAATAATCAATACCGGCCA+TGG 0.534042 1.1:-37634845 MS.gene035537:CDS
AGATAGATGGGCAGAATGGG+GGG 0.535500 1.1:-37633994 MS.gene035537:CDS
AAAACGGTTTATAGATAGAT+GGG 0.536629 1.1:-37634006 MS.gene035537:CDS
TCGATACCTGGAGTTTATGT+TGG 0.538082 1.1:-37635037 MS.gene035537:CDS
CTGGCTATATGAGCCATAGT+TGG 0.538666 1.1:-37633875 MS.gene035537:CDS
GGTTTGTGGTTCATCAGAGC+GGG 0.543952 1.1:-37634376 MS.gene035537:CDS
TTATGATTCGCTACGTGTGT+TGG 0.545706 1.1:-37635368 MS.gene035537:CDS
GTGGTGAAGAAATCCTCAAA+AGG 0.546407 1.1:+37635829 None:intergenic
AATTTGTGATCAGAAATTAG+AGG 0.546612 1.1:-37634795 MS.gene035537:CDS
GACTGAGTTCTCCATTGAAG+CGG 0.547564 1.1:+37635609 None:intergenic
AAAGGGGATCAAGCATAGGT+TGG 0.547811 1.1:-37634177 MS.gene035537:CDS
GATGATATGGAATTGGATGA+TGG 0.549294 1.1:-37634872 MS.gene035537:CDS
GGTGATGTAATAATCAATAC+CGG 0.550208 1.1:-37634851 MS.gene035537:CDS
ATTCGTGAGATGAAGTATGA+AGG 0.550982 1.1:-37634719 MS.gene035537:CDS
CCGTCTCATGCTATATGCAA+TGG 0.560658 1.1:-37633796 MS.gene035537:CDS
TGTTGATATTTCACACAAGA+GGG 0.562610 1.1:-37634486 MS.gene035537:CDS
AGGCAAGTCAGATGCTTGTG+AGG 0.562686 1.1:-37635453 MS.gene035537:CDS
TGGTGATGAGAACATGGAAG+AGG 0.565897 1.1:-37635191 MS.gene035537:CDS
GGGTGCGTCTAGCTCTGGTA+AGG 0.568302 1.1:-37634696 MS.gene035537:CDS
TGGCATCCCTGACGAGTGGG+CGG 0.569853 1.1:-37633736 MS.gene035537:CDS
CTGTTGATATTTCACACAAG+AGG 0.573952 1.1:-37634487 MS.gene035537:CDS
CATTGCATATAGCATGAGAC+GGG 0.574005 1.1:+37633797 None:intergenic
ATAGATAGATGGGCAGAATG+GGG 0.576328 1.1:-37633996 MS.gene035537:CDS
AAGGGCTGCGAGGTTAATGA+AGG 0.576510 1.1:-37635101 MS.gene035537:CDS
GGTTTCAGATCTGAGTATGA+AGG 0.579176 1.1:-37635431 MS.gene035537:CDS
ATTTGTGATCAGAAATTAGA+GGG 0.579266 1.1:-37634794 MS.gene035537:CDS
GCTTGCCCGCCCACTCGTCA+GGG 0.582498 1.1:+37633730 None:intergenic
GCATACTACGCTCCAAAGCA+AGG 0.582921 1.1:+37634765 None:intergenic
TGCTGAGTTCTCTCAATGGA+GGG 0.584149 1.1:+37633766 None:intergenic
GTGTAAATGGGAGTGATTTG+GGG 0.585866 1.1:+37635892 None:intergenic
TTCCCTTGTTAAAATTACCC+CGG 0.586982 1.1:+37634073 None:intergenic
ATTGAGGGGCAAGCTAAGAT+GGG 0.587188 1.1:-37634581 MS.gene035537:CDS
ACATCGCCAACATAAACTCC+AGG 0.587833 1.1:+37635031 None:intergenic
CCATTGCATATAGCATGAGA+CGG 0.588288 1.1:+37633796 None:intergenic
TCATATCCAGGAGGGAAATG+AGG 0.588395 1.1:+37635751 None:intergenic
GGGACGAGTATGGTTTGAAG+CGG 0.590830 1.1:+37635862 None:intergenic
GGAAGAGGCAGCAACAGGGG+TGG 0.591867 1.1:-37635176 MS.gene035537:CDS
ACTAAATCAGAACCCTAACA+TGG 0.593938 1.1:-37635569 MS.gene035537:CDS
CTCTGATGAACCACAAACCA+CGG 0.596324 1.1:+37634380 None:intergenic
ACTAGTGTGATTGTTTCATG+TGG 0.597219 1.1:-37634902 MS.gene035537:CDS
TCATATCCATGAGGGAAATG+AGG 0.597266 1.1:+37635787 None:intergenic
AGCTACTGGTTGTGAATGTG+TGG 0.598292 1.1:-37634351 MS.gene035537:CDS
GGCAAGTCAGATGCTTGTGA+GGG 0.598305 1.1:-37635452 MS.gene035537:CDS
CATGGAAGAGGCAGCAACAG+GGG 0.601065 1.1:-37635179 MS.gene035537:CDS
TCAACAGAAAGACAATACAT+AGG 0.601273 1.1:+37634503 None:intergenic
TGTTGTAGTACTCAGTGTAG+AGG 0.601469 1.1:+37635710 None:intergenic
ATGCTGAGTTCTCTCAATGG+AGG 0.603033 1.1:+37633765 None:intergenic
GGGAGCTGGTGATGAGAACA+TGG 0.604987 1.1:-37635197 MS.gene035537:CDS
TGAGGAGAAGATGTTGGATG+AGG 0.605221 1.1:-37635263 MS.gene035537:CDS
TCTATGCTGAGTTCTCTCAA+TGG 0.607917 1.1:+37633762 None:intergenic
TTGCATATGCAGATACAAGA+TGG 0.611206 1.1:-37634974 MS.gene035537:CDS
AGATGCATCGCAACATGATG+AGG 0.612112 1.1:-37635405 MS.gene035537:CDS
GAAGTAGCATTGGAAGATTG+TGG 0.615801 1.1:+37635685 None:intergenic
GTTCTGATTTAGTCCAAGGT+CGG 0.618069 1.1:+37635579 None:intergenic
CTATGGCATCCCTGACGAGT+GGG 0.626017 1.1:-37633739 MS.gene035537:CDS
GCAACATGATGAGGAGAACA+AGG 0.627298 1.1:-37635396 MS.gene035537:CDS
ACGTGTGTTGGAAAGTATTG+AGG 0.633669 1.1:-37635356 MS.gene035537:CDS
ACATGGAAGAGGCAGCAACA+GGG 0.638672 1.1:-37635180 MS.gene035537:CDS
TGTGATCAGAAATTAGAGGG+TGG 0.640509 1.1:-37634791 MS.gene035537:CDS
AGACATCATAATCATAGTCG+TGG 0.641416 1.1:-37635130 MS.gene035537:CDS
CACAAAAGGGGATCAAGCAT+AGG 0.642092 1.1:-37634181 MS.gene035537:CDS
TACTGGTTGTGAATGTGTGG+AGG 0.644458 1.1:-37634348 MS.gene035537:CDS
ATAAGTTATTGAGAATTGAG+GGG 0.645000 1.1:-37634595 MS.gene035537:CDS
CAAATCACTCCCATTTACAC+CGG 0.645622 1.1:-37635889 MS.gene035537:CDS
CTAAATCAGAACCCTAACAT+GGG 0.650681 1.1:-37635568 MS.gene035537:CDS
ACTATGGCATCCCTGACGAG+TGG 0.651275 1.1:-37633740 MS.gene035537:CDS
ACACGATTCCGACAATTGGG+AGG 0.651351 1.1:+37634206 None:intergenic
TCGTGAGATGAAGTATGAAG+GGG 0.657054 1.1:-37634717 MS.gene035537:CDS
TGGTTTGTGGTTCATCAGAG+CGG 0.658060 1.1:-37634377 MS.gene035537:CDS
CCTAAAAGTAGGTCTTCCAA+TGG 0.661785 1.1:-37634938 MS.gene035537:CDS
TAAATCAGAACCCTAACATG+GGG 0.662393 1.1:-37635567 MS.gene035537:CDS
GGAATCGTGTTGCACAAAAG+GGG 0.665750 1.1:-37634193 MS.gene035537:CDS
TGTTGTGTTCATATCCATGA+GGG 0.680837 1.1:+37635779 None:intergenic
GAAACAAGAATCATGTTCGG+CGG 0.682834 1.1:-37635494 MS.gene035537:CDS
CGTGAGATGAAGTATGAAGG+GGG 0.704890 1.1:-37634716 MS.gene035537:CDS
CTTTATCTGCGAGTATACCG+GGG 0.705407 1.1:-37634090 MS.gene035537:CDS
ATAATCAATACCGGCCATGG+AGG 0.709610 1.1:-37634842 MS.gene035537:CDS
GTGGTTTCATAAGGGCTGCG+AGG 0.711383 1.1:-37635111 MS.gene035537:CDS
ATTGCATATAGCATGAGACG+GGG 0.721884 1.1:+37633798 None:intergenic
TTGCATATAGCATGAGACGG+GGG 0.722787 1.1:+37633799 None:intergenic
TTGTTGTGTTCATATCCATG+AGG 0.736385 1.1:+37635778 None:intergenic
AAATCAGAACCCTAACATGG+GGG 0.770325 1.1:-37635566 MS.gene035537:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATGATAAAGGGATTTAT+CGG + chr1.1:37633968-37633987 None:intergenic 20.0%
!! ACAAATTGAACAAATACATT+TGG + chr1.1:37635782-37635801 None:intergenic 20.0%
!! TATAAGTTATTGAGAATTGA+GGG - chr1.1:37635032-37635051 MS.gene035537:CDS 20.0%
!!! ATGTTTATGATGGATTATAT+AGG - chr1.1:37634958-37634977 MS.gene035537:CDS 20.0%
!!! GATTTTGAGAAAATGATAAA+GGG + chr1.1:37633977-37633996 None:intergenic 20.0%
! AAAACGGTTTATAGATAGAT+GGG - chr1.1:37635622-37635641 MS.gene035537:CDS 25.0%
! AAAGAAACAAGAATCATGTT+CGG - chr1.1:37634131-37634150 MS.gene035537:CDS 25.0%
! AATTATTGAGGAGAAGAAAT+TGG - chr1.1:37634305-37634324 MS.gene035537:CDS 25.0%
! AATTTGTGATCAGAAATTAG+AGG - chr1.1:37634833-37634852 MS.gene035537:CDS 25.0%
! ACCTGATATAGATTATTCTA+TGG - chr1.1:37635706-37635725 MS.gene035537:CDS 25.0%
! ACTCGTTAATATATCCAAAA+CGG - chr1.1:37635606-37635625 MS.gene035537:CDS 25.0%
! ATAAGTTATTGAGAATTGAG+GGG - chr1.1:37635033-37635052 MS.gene035537:CDS 25.0%
! ATTTGTGATCAGAAATTAGA+GGG - chr1.1:37634834-37634853 MS.gene035537:CDS 25.0%
! GTATAAGTTATTGAGAATTG+AGG - chr1.1:37635031-37635050 MS.gene035537:CDS 25.0%
! TCAGGTATTAATTGATATGA+TGG + chr1.1:37635692-37635711 None:intergenic 25.0%
! TCCATAGAATAATCTATATC+AGG + chr1.1:37635710-37635729 None:intergenic 25.0%
!! TGATTCTTGTTTCTTTGAAA+TGG + chr1.1:37634127-37634146 None:intergenic 25.0%
!! TTGATTTTCTTCCTAAAAGT+AGG - chr1.1:37634679-37634698 MS.gene035537:CDS 25.0%
!!! CGATTTTGAGAAAATGATAA+AGG + chr1.1:37633978-37633997 None:intergenic 25.0%
!!! GATTCTTGTTTCTTTGAAAT+GGG + chr1.1:37634126-37634145 None:intergenic 25.0%
!!! GCTCAAATTTTAACAATGAA+TGG - chr1.1:37635581-37635600 MS.gene035537:CDS 25.0%
AAGAAATCCTCAAAAGGTTT+AGG + chr1.1:37633796-37633815 None:intergenic 30.0%
ATGTCATTAAATAGCCTAAC+AGG + chr1.1:37635176-37635195 None:intergenic 30.0%
CAAAACGGTTTATAGATAGA+TGG - chr1.1:37635621-37635640 MS.gene035537:CDS 30.0%
CTAGGGAGATTAAGAAAATT+GGG - chr1.1:37635090-37635109 MS.gene035537:CDS 30.0%
GGAAGATACTCATAATAAAG+AGG + chr1.1:37635215-37635234 None:intergenic 30.0%
GGATGAGAAAAGAATTATTG+AGG - chr1.1:37634293-37634312 MS.gene035537:CDS 30.0%
GGTAAGGTTTATGTTTATGA+TGG - chr1.1:37634948-37634967 MS.gene035537:CDS 30.0%
GGTGATGTAATAATCAATAC+CGG - chr1.1:37634777-37634796 MS.gene035537:CDS 30.0%
TCAACAGAAAGACAATACAT+AGG + chr1.1:37635128-37635147 None:intergenic 30.0%
TGTTGATATTTCACACAAGA+GGG - chr1.1:37635142-37635161 MS.gene035537:CDS 30.0%
TTATGAGGATGATATGGAAT+TGG - chr1.1:37634749-37634768 MS.gene035537:CDS 30.0%
! ATGGTGGAATTATGTGTAAT+TGG - chr1.1:37634630-37634649 MS.gene035537:CDS 30.0%
! CATCTATCTATAAACCGTTT+TGG + chr1.1:37635623-37635642 None:intergenic 30.0%
! TATATAGGATTACTGATTGC+TGG - chr1.1:37634973-37634992 MS.gene035537:CDS 30.0%
! TGATTTTTGTGTTCATATCC+AGG + chr1.1:37633892-37633911 None:intergenic 30.0%
!! TGTTGTTCTAAAAAAGGCTA+GGG - chr1.1:37635073-37635092 MS.gene035537:CDS 30.0%
AAGCAAACCCTGAAGATTAT+AGG + chr1.1:37635354-37635373 None:intergenic 35.0%
AATTCTTCTTTCTTCCTCCA+TGG + chr1.1:37634803-37634822 None:intergenic 35.0%
ACAATCACACTAGTAGCAAT+TGG + chr1.1:37634720-37634739 None:intergenic 35.0%
ACTAAATCAGAACCCTAACA+TGG - chr1.1:37634059-37634078 MS.gene035537:CDS 35.0%
ACTAGTGTGATTGTTTCATG+TGG - chr1.1:37634726-37634745 MS.gene035537:CDS 35.0%
AGACATCATAATCATAGTCG+TGG - chr1.1:37634498-37634517 MS.gene035537:CDS 35.0%
AGAGTTTCCCTATAATCTTC+AGG - chr1.1:37635343-37635362 MS.gene035537:CDS 35.0%
AGCAAACCCTGAAGATTATA+GGG + chr1.1:37635353-37635372 None:intergenic 35.0%
ATACATTTGGACTCCAACTA+TGG + chr1.1:37635769-37635788 None:intergenic 35.0%
ATCATAGTCGTGGTTTCATA+AGG - chr1.1:37634508-37634527 MS.gene035537:CDS 35.0%
ATGTGGTTATGAGGATGATA+TGG - chr1.1:37634743-37634762 MS.gene035537:CDS 35.0%
ATTCGTGAGATGAAGTATGA+AGG - chr1.1:37634909-37634928 MS.gene035537:CDS 35.0%
CTAAATCAGAACCCTAACAT+GGG - chr1.1:37634060-37634079 MS.gene035537:CDS 35.0%
CTGTTGATATTTCACACAAG+AGG - chr1.1:37635141-37635160 MS.gene035537:CDS 35.0%
GAGTTTCCCTATAATCTTCA+GGG - chr1.1:37635344-37635363 MS.gene035537:CDS 35.0%
GATGATATGGAATTGGATGA+TGG - chr1.1:37634756-37634775 MS.gene035537:CDS 35.0%
GATTGTTTCATGTGGTTATG+AGG - chr1.1:37634734-37634753 MS.gene035537:CDS 35.0%
GCTAGGGAGATTAAGAAAAT+TGG - chr1.1:37635089-37635108 MS.gene035537:CDS 35.0%
GGAGATTAAGAAAATTGGGT+TGG - chr1.1:37635094-37635113 MS.gene035537:CDS 35.0%
GGTAGCTATGGTTAAGAAAA+AGG - chr1.1:37634155-37634174 MS.gene035537:CDS 35.0%
TAAATCAGAACCCTAACATG+GGG - chr1.1:37634061-37634080 MS.gene035537:CDS 35.0%
TAATGAAGGACCGAAAGTTA+TGG - chr1.1:37634541-37634560 MS.gene035537:CDS 35.0%
TACGTCTTTGGATCTTATTC+AGG - chr1.1:37635508-37635527 MS.gene035537:CDS 35.0%
TATAGATAGATGGGCAGAAT+GGG - chr1.1:37635631-37635650 MS.gene035537:CDS 35.0%
TCATAGTCGTGGTTTCATAA+GGG - chr1.1:37634509-37634528 MS.gene035537:CDS 35.0%
TGTTGTGTTCATATCCATGA+GGG + chr1.1:37633852-37633871 None:intergenic 35.0%
TTATAGATAGATGGGCAGAA+TGG - chr1.1:37635630-37635649 MS.gene035537:CDS 35.0%
TTCCCTTGTTAAAATTACCC+CGG + chr1.1:37635558-37635577 None:intergenic 35.0%
TTCGTGAGATGAAGTATGAA+GGG - chr1.1:37634910-37634929 MS.gene035537:CDS 35.0%
TTGCATATGCAGATACAAGA+TGG - chr1.1:37634654-37634673 MS.gene035537:CDS 35.0%
TTGTTGTGTTCATATCCATG+AGG + chr1.1:37633853-37633872 None:intergenic 35.0%
! AACCACGGAAAAGTAGTTTT+CGG + chr1.1:37635236-37635255 None:intergenic 35.0%
! ATTGGCTGATGAAGTTTTTG+TGG - chr1.1:37634323-37634342 MS.gene035537:CDS 35.0%
! CGATGTTTTCTTGTATATGG+TGG - chr1.1:37634614-37634633 MS.gene035537:CDS 35.0%
! TGCTTTTGCTCTATGAAGAA+TGG - chr1.1:37635317-37635336 MS.gene035537:CDS 35.0%
! TGGCGATGTTTTCTTGTATA+TGG - chr1.1:37634611-37634630 MS.gene035537:CDS 35.0%
! TTTTGCTCTATGAAGAATGG+AGG - chr1.1:37635320-37635339 MS.gene035537:CDS 35.0%
! TTTTGTGTTCATATCCAGGA+GGG + chr1.1:37633888-37633907 None:intergenic 35.0%
! TTTTTGTGTTCATATCCAGG+AGG + chr1.1:37633889-37633908 None:intergenic 35.0%
!! ATACCGGGGTAATTTTAACA+AGG - chr1.1:37635552-37635571 MS.gene035537:CDS 35.0%
!! CCTCAAAAGGTTTAGGTTTT+GGG + chr1.1:37633789-37633808 None:intergenic 35.0%
!! GGGTAGTGTTGTTCTAAAAA+AGG - chr1.1:37635067-37635086 MS.gene035537:CDS 35.0%
!! GTGTTGTTCTAAAAAAGGCT+AGG - chr1.1:37635072-37635091 MS.gene035537:CDS 35.0%
!! TACCGGGGTAATTTTAACAA+GGG - chr1.1:37635553-37635572 MS.gene035537:CDS 35.0%
!! TCCTCAAAAGGTTTAGGTTT+TGG + chr1.1:37633790-37633809 None:intergenic 35.0%
!! TGTTTCTGAAGTTGCGATTA+TGG - chr1.1:37634398-37634417 MS.gene035537:CDS 35.0%
!!! AAGCCTTTGGTTTTTGAATG+TGG - chr1.1:37635383-37635402 MS.gene035537:CDS 35.0%
!!! AGGGAAATGAGGTTGTTTTT+GGG + chr1.1:37633833-37633852 None:intergenic 35.0%
AAACAACCTCATTTCCCTCA+TGG - chr1.1:37633835-37633854 MS.gene035537:CDS 40.0%
AAATCAGAACCCTAACATGG+GGG - chr1.1:37634062-37634081 MS.gene035537:CDS 40.0%
AGAAGATGTTGGATGAGGAT+AGG - chr1.1:37634370-37634389 MS.gene035537:CDS 40.0%
AGAGAACTCAGCATAGACTA+TGG - chr1.1:37635872-37635891 MS.gene035537:CDS 40.0%
ATAGATAGATGGGCAGAATG+GGG - chr1.1:37635632-37635651 MS.gene035537:CDS 40.0%
ATTGCATATAGCATGAGACG+GGG + chr1.1:37635833-37635852 None:intergenic 40.0%
ATTGGTTGAGGAGAAGATGT+TGG - chr1.1:37634359-37634378 MS.gene035537:CDS 40.0%
CAAATCACTCCCATTTACAC+CGG - chr1.1:37633739-37633758 MS.gene035537:CDS 40.0%
CATCGCGATAAAAGGATAGT+TGG - chr1.1:37634567-37634586 MS.gene035537:CDS 40.0%
CATTGCATATAGCATGAGAC+GGG + chr1.1:37635834-37635853 None:intergenic 40.0%
CCATTGCATATAGCATGAGA+CGG + chr1.1:37635835-37635854 None:intergenic 40.0%
CCTAAAAGTAGGTCTTCCAA+TGG - chr1.1:37634690-37634709 MS.gene035537:CDS 40.0%
GAAACAAGAATCATGTTCGG+CGG - chr1.1:37634134-37634153 MS.gene035537:CDS 40.0%
GGATTTATCGGAAGTAGCAT+TGG + chr1.1:37633956-37633975 None:intergenic 40.0%
GGTGTAAATGGGAGTGATTT+GGG + chr1.1:37633740-37633759 None:intergenic 40.0%
GGTTTCAGATCTGAGTATGA+AGG - chr1.1:37634197-37634216 MS.gene035537:CDS 40.0%
GTAATAATCAATACCGGCCA+TGG - chr1.1:37634783-37634802 MS.gene035537:CDS 40.0%
GTGGTGAAGAAATCCTCAAA+AGG + chr1.1:37633802-37633821 None:intergenic 40.0%
GTGTAAATGGGAGTGATTTG+GGG + chr1.1:37633739-37633758 None:intergenic 40.0%
GTTCTGATTTAGTCCAAGGT+CGG + chr1.1:37634052-37634071 None:intergenic 40.0%
TATGGTTGCATCGCGATAAA+AGG - chr1.1:37634559-37634578 MS.gene035537:CDS 40.0%
TCAACATTGCGAAATGTTGC+TGG - chr1.1:37635734-37635753 MS.gene035537:CDS 40.0%
TCAGTCAATATTTCCGACCT+TGG - chr1.1:37634036-37634055 MS.gene035537:CDS 40.0%
TCATATCCATGAGGGAAATG+AGG + chr1.1:37633844-37633863 None:intergenic 40.0%
TCGATACCTGGAGTTTATGT+TGG - chr1.1:37634591-37634610 MS.gene035537:CDS 40.0%
TCGTGAGATGAAGTATGAAG+GGG - chr1.1:37634911-37634930 MS.gene035537:CDS 40.0%
TCTATGCTGAGTTCTCTCAA+TGG + chr1.1:37635869-37635888 None:intergenic 40.0%
TCTTTGGATCTTATTCAGGC+TGG - chr1.1:37635512-37635531 MS.gene035537:CDS 40.0%
TGAAGTTGCGATTATGGAGA+TGG - chr1.1:37634404-37634423 MS.gene035537:CDS 40.0%
TGTGATCAGAAATTAGAGGG+TGG - chr1.1:37634837-37634856 MS.gene035537:CDS 40.0%
TGTTGTAGTACTCAGTGTAG+AGG + chr1.1:37633921-37633940 None:intergenic 40.0%
TTATGATTCGCTACGTGTGT+TGG - chr1.1:37634260-37634279 MS.gene035537:CDS 40.0%
TTGGAGCGTAGTATGCATTA+CGG - chr1.1:37634870-37634889 MS.gene035537:CDS 40.0%
! CCCAAAACCTAAACCTTTTG+AGG - chr1.1:37633786-37633805 MS.gene035537:CDS 40.0%
! GAAGTAGCATTGGAAGATTG+TGG + chr1.1:37633946-37633965 None:intergenic 40.0%
! TAGGGTTCTGATTTAGTCCA+AGG + chr1.1:37634056-37634075 None:intergenic 40.0%
! TTCAGGGTTTGCTTGTGAAA+GGG - chr1.1:37635360-37635379 MS.gene035537:CDS 40.0%
!! AACTACTTTTCCGTGGTTTG+TGG - chr1.1:37635238-37635257 MS.gene035537:CDS 40.0%
!! ACGTGTGTTGGAAAGTATTG+AGG - chr1.1:37634272-37634291 MS.gene035537:CDS 40.0%
!! ACTGATTGCTGGTTTGAAGA+AGG - chr1.1:37634984-37635003 MS.gene035537:CDS 40.0%
!! CCATTGGAAGACCTACTTTT+AGG + chr1.1:37634693-37634712 None:intergenic 40.0%
!! CTGATTGCTGGTTTGAAGAA+GGG - chr1.1:37634985-37635004 MS.gene035537:CDS 40.0%
!! GAGGGAAATGAGGTTGTTTT+TGG + chr1.1:37633834-37633853 None:intergenic 40.0%
!! TTCCGAAAACTACTTTTCCG+TGG - chr1.1:37635231-37635250 MS.gene035537:CDS 40.0%
!!! AGGTTGTTTTTGGGAACCTT+GGG + chr1.1:37633824-37633843 None:intergenic 40.0%
!!! TTTAGGTTTTGGGACGAGTA+TGG + chr1.1:37633779-37633798 None:intergenic 40.0%
AAAGGGGATCAAGCATAGGT+TGG - chr1.1:37635451-37635470 MS.gene035537:CDS 45.0%
AATCAACCTCATTTCCCTCC+TGG - chr1.1:37633871-37633890 MS.gene035537:CDS 45.0%
AATTGAGGGGCAAGCTAAGA+TGG - chr1.1:37635046-37635065 MS.gene035537:CDS 45.0%
ACAAAATCCACCCCCATGTT+AGG + chr1.1:37634075-37634094 None:intergenic 45.0%
ACATCGCCAACATAAACTCC+AGG + chr1.1:37634600-37634619 None:intergenic 45.0%
AGAGGGAGAATGTTCCTGTT+AGG - chr1.1:37635159-37635178 MS.gene035537:CDS 45.0%
AGATGCATCGCAACATGATG+AGG - chr1.1:37634223-37634242 MS.gene035537:CDS 45.0%
AGGATAGTTGGATCGATACC+TGG - chr1.1:37634579-37634598 MS.gene035537:CDS 45.0%
ATAATCAATACCGGCCATGG+AGG - chr1.1:37634786-37634805 MS.gene035537:CDS 45.0%
ATGCTGAGTTCTCTCAATGG+AGG + chr1.1:37635866-37635885 None:intergenic 45.0%
ATTGAGGGGCAAGCTAAGAT+GGG - chr1.1:37635047-37635066 MS.gene035537:CDS 45.0%
CAAAATCCACCCCCATGTTA+GGG + chr1.1:37634074-37634093 None:intergenic 45.0%
CACAAAAGGGGATCAAGCAT+AGG - chr1.1:37635447-37635466 MS.gene035537:CDS 45.0%
CCGTCTCATGCTATATGCAA+TGG - chr1.1:37635832-37635851 MS.gene035537:CDS 45.0%
CCTTTATCTGCGAGTATACC+GGG - chr1.1:37635537-37635556 MS.gene035537:CDS 45.0%
CGCGATGCAACCATAACTTT+CGG + chr1.1:37634554-37634573 None:intergenic 45.0%
CGGAATCGTGTTGCACAAAA+GGG - chr1.1:37635434-37635453 MS.gene035537:CDS 45.0%
CGGTGTAAATGGGAGTGATT+TGG + chr1.1:37633741-37633760 None:intergenic 45.0%
CGTGAGATGAAGTATGAAGG+GGG - chr1.1:37634912-37634931 MS.gene035537:CDS 45.0%
CTCTGATGAACCACAAACCA+CGG + chr1.1:37635251-37635270 None:intergenic 45.0%
CTGGCTATATGAGCCATAGT+TGG - chr1.1:37635753-37635772 MS.gene035537:CDS 45.0%
CTTTATCTGCGAGTATACCG+GGG - chr1.1:37635538-37635557 MS.gene035537:CDS 45.0%
GACTGAGTTCTCCATTGAAG+CGG + chr1.1:37634022-37634041 None:intergenic 45.0%
GCAACACGATTCCGACAATT+GGG + chr1.1:37635428-37635447 None:intergenic 45.0%
GCAACATGATGAGGAGAACA+AGG - chr1.1:37634232-37634251 MS.gene035537:CDS 45.0%
GCATTACGGGATCGAGATTA+GGG - chr1.1:37634884-37634903 MS.gene035537:CDS 45.0%
GCCTTTATCTGCGAGTATAC+CGG - chr1.1:37635536-37635555 MS.gene035537:CDS 45.0%
GCGATTATGGAGATGGAGAT+GGG - chr1.1:37634411-37634430 MS.gene035537:CDS 45.0%
GGAATCGTGTTGCACAAAAG+GGG - chr1.1:37635435-37635454 MS.gene035537:CDS 45.0%
GGGCCACATTCAAAAACCAA+AGG + chr1.1:37635389-37635408 None:intergenic 45.0%
TAGATAGATGGGCAGAATGG+GGG - chr1.1:37635633-37635652 MS.gene035537:CDS 45.0%
TCATATCCAGGAGGGAAATG+AGG + chr1.1:37633880-37633899 None:intergenic 45.0%
TCGGAATCGTGTTGCACAAA+AGG - chr1.1:37635433-37635452 MS.gene035537:CDS 45.0%
TGAGGAGAAGATGTTGGATG+AGG - chr1.1:37634365-37634384 MS.gene035537:CDS 45.0%
TGCAACACGATTCCGACAAT+TGG + chr1.1:37635429-37635448 None:intergenic 45.0%
TGCATTACGGGATCGAGATT+AGG - chr1.1:37634883-37634902 MS.gene035537:CDS 45.0%
TGCGATTATGGAGATGGAGA+TGG - chr1.1:37634410-37634429 MS.gene035537:CDS 45.0%
TGCTGAGTTCTCTCAATGGA+GGG + chr1.1:37635865-37635884 None:intergenic 45.0%
TGGAGCGTAGTATGCATTAC+GGG - chr1.1:37634871-37634890 MS.gene035537:CDS 45.0%
TGGGAGGACAAGAGCAAAAA+GGG + chr1.1:37635409-37635428 None:intergenic 45.0%
TGGTTTGAAGAAGGGATGTC+TGG - chr1.1:37634993-37635012 MS.gene035537:CDS 45.0%
TTGCATATAGCATGAGACGG+GGG + chr1.1:37635832-37635851 None:intergenic 45.0%
TTGGGAGGACAAGAGCAAAA+AGG + chr1.1:37635410-37635429 None:intergenic 45.0%
! AGCTACTGGTTGTGAATGTG+TGG - chr1.1:37635277-37635296 MS.gene035537:CDS 45.0%
! CTTCAGGGTTTGCTTGTGAA+AGG - chr1.1:37635359-37635378 MS.gene035537:CDS 45.0%
! GGCTGATGAAGTTTTTGTGG+AGG - chr1.1:37634326-37634345 MS.gene035537:CDS 45.0%
! TACTGGTTGTGAATGTGTGG+AGG - chr1.1:37635280-37635299 MS.gene035537:CDS 45.0%
! TGGTGATGAGAACATGGAAG+AGG - chr1.1:37634437-37634456 MS.gene035537:CDS 45.0%
! TGGTTTGTGGTTCATCAGAG+CGG - chr1.1:37635251-37635270 MS.gene035537:CDS 45.0%
!! AGCATAGGTTGGAAGTGTTC+AGG - chr1.1:37635462-37635481 MS.gene035537:CDS 45.0%
!! CAATGCTTTTGCCGCTTCAA+TGG - chr1.1:37634008-37634027 MS.gene035537:CDS 45.0%
!! TAACATGGGGGTGGATTTTG+TGG - chr1.1:37634074-37634093 MS.gene035537:CDS 45.0%
!! TGAAGCGGCAAAAGCATTGT+TGG + chr1.1:37634007-37634026 None:intergenic 45.0%
!!! GAGGTTGTTTTTGGGAACCT+TGG + chr1.1:37633825-37633844 None:intergenic 45.0%
!!! TTGTTTTTGGGAACCTTGGG+TGG + chr1.1:37633821-37633840 None:intergenic 45.0%
AACATGGAAGAGGCAGCAAC+AGG - chr1.1:37634447-37634466 MS.gene035537:CDS 50.0%
AAGGGCTGCGAGGTTAATGA+AGG - chr1.1:37634527-37634546 MS.gene035537:CDS 50.0%
ACACGATTCCGACAATTGGG+AGG + chr1.1:37635425-37635444 None:intergenic 50.0%
ACATGGAAGAGGCAGCAACA+GGG - chr1.1:37634448-37634467 MS.gene035537:CDS 50.0%
AGAGGGTGGAAACCTTGCTT+TGG - chr1.1:37634851-37634870 MS.gene035537:CDS 50.0%
AGATAGATGGGCAGAATGGG+GGG - chr1.1:37635634-37635653 MS.gene035537:CDS 50.0%
AGGCAAGTCAGATGCTTGTG+AGG - chr1.1:37634175-37634194 MS.gene035537:CDS 50.0%
ATCATGTTCGGCGGTAGCTA+TGG - chr1.1:37634143-37634162 MS.gene035537:CDS 50.0%
CCCGGTATACTCGCAGATAA+AGG + chr1.1:37635540-37635559 None:intergenic 50.0%
CTTCTTTCTTCCTCCATGGC+CGG + chr1.1:37634799-37634818 None:intergenic 50.0%
GAGGATTTCTTCACCACCCA+AGG - chr1.1:37633805-37633824 MS.gene035537:CDS 50.0%
GCATACTACGCTCCAAAGCA+AGG + chr1.1:37634866-37634885 None:intergenic 50.0%
GCTCTTGTCCTCCCAATTGT+CGG - chr1.1:37635414-37635433 MS.gene035537:CDS 50.0%
GCTTGTGAAAGGGAAGCCTT+TGG - chr1.1:37635370-37635389 MS.gene035537:CDS 50.0%
GGCAAGTCAGATGCTTGTGA+GGG - chr1.1:37634176-37634195 MS.gene035537:CDS 50.0%
GGGACGAGTATGGTTTGAAG+CGG + chr1.1:37633769-37633788 None:intergenic 50.0%
GGTTTGTGGTTCATCAGAGC+GGG - chr1.1:37635252-37635271 MS.gene035537:CDS 50.0%
GTGGAGGGGGAAATGTTGAA+TGG - chr1.1:37634471-37634490 MS.gene035537:CDS 50.0%
TGGTTGGGGAGTTACGTCTT+TGG - chr1.1:37635496-37635515 MS.gene035537:CDS 50.0%
TGTGGAGGCAGTGAAGAGAT+TGG - chr1.1:37634341-37634360 MS.gene035537:CDS 50.0%
TGTGTGGAGGCTTGTACTGA+TGG - chr1.1:37635293-37635312 MS.gene035537:CDS 50.0%
! GGCAGTGAAGAGATTGGTTG+AGG - chr1.1:37634347-37634366 MS.gene035537:CDS 50.0%
! GGGAGTGATTTGGGGATTGA+GGG + chr1.1:37633731-37633750 None:intergenic 50.0%
! TATGGTTTGAAGCGGTGCTC+CGG + chr1.1:37633761-37633780 None:intergenic 50.0%
! TGGGAGTGATTTGGGGATTG+AGG + chr1.1:37633732-37633751 None:intergenic 50.0%
!! AGTAGCAATTGGCTCGCCAT+TGG + chr1.1:37634709-37634728 None:intergenic 50.0%
AAGCGGTGCTCCGGTGTAAA+TGG + chr1.1:37633752-37633771 None:intergenic 55.0%
ACTATGGCATCCCTGACGAG+TGG - chr1.1:37635888-37635907 MS.gene035537:CDS 55.0%
AGCGGTGCTCCGGTGTAAAT+GGG + chr1.1:37633751-37633770 None:intergenic 55.0%
AGGTCTGCGCAAACTGGTTG+GGG - chr1.1:37635482-37635501 MS.gene035537:CDS 55.0%
ATGGAGATGGAGATGGGAGC+TGG - chr1.1:37634417-37634436 MS.gene035537:CDS 55.0%
CAGGTCTGCGCAAACTGGTT+GGG - chr1.1:37635481-37635500 MS.gene035537:CDS 55.0%
CATCAGAGCGGGAAAGCTAC+TGG - chr1.1:37635263-37635282 MS.gene035537:CDS 55.0%
CATGGAAGAGGCAGCAACAG+GGG - chr1.1:37634449-37634468 MS.gene035537:CDS 55.0%
CTATGGCATCCCTGACGAGT+GGG - chr1.1:37635889-37635908 MS.gene035537:CDS 55.0%
GTGGTTTCATAAGGGCTGCG+AGG - chr1.1:37634517-37634536 MS.gene035537:CDS 55.0%
GTGTTCAGGTCTGCGCAAAC+TGG - chr1.1:37635476-37635495 MS.gene035537:CDS 55.0%
TCAGAACCCTAACATGGGGG+TGG - chr1.1:37634065-37634084 MS.gene035537:CDS 55.0%
TCAGGTCTGCGCAAACTGGT+TGG - chr1.1:37635480-37635499 MS.gene035537:CDS 55.0%
! GGGAGCTGGTGATGAGAACA+TGG - chr1.1:37634431-37634450 MS.gene035537:CDS 55.0%
!! GGGTGCGTCTAGCTCTGGTA+AGG - chr1.1:37634932-37634951 MS.gene035537:CDS 60.0%
AGAGGCAGCAACAGGGGTGG+AGG - chr1.1:37634455-37634474 MS.gene035537:CDS 65.0%
AGGCAGCAACAGGGGTGGAG+GGG - chr1.1:37634457-37634476 MS.gene035537:CDS 65.0%
GAGGCAGCAACAGGGGTGGA+GGG - chr1.1:37634456-37634475 MS.gene035537:CDS 65.0%
GGAAGAGGCAGCAACAGGGG+TGG - chr1.1:37634452-37634471 MS.gene035537:CDS 65.0%
TGGCATCCCTGACGAGTGGG+CGG - chr1.1:37635892-37635911 MS.gene035537:CDS 65.0%
! GAAGGGGGTGCGTCTAGCTC+TGG - chr1.1:37634927-37634946 MS.gene035537:CDS 65.0%
AGCTTGCCCGCCCACTCGTC+AGG + chr1.1:37635902-37635921 None:intergenic 70.0%
GCTTGCCCGCCCACTCGTCA+GGG + chr1.1:37635901-37635920 None:intergenic 70.0%
GGCAGCAACAGGGGTGGAGG+GGG - chr1.1:37634458-37634477 MS.gene035537:CDS 70.0%
GGCATCCCTGACGAGTGGGC+GGG - chr1.1:37635893-37635912 MS.gene035537:CDS 70.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 37633721 37635929 37633721 ID=MS.gene035537
chr1.1 mRNA 37633721 37635929 37633721 ID=MS.gene035537.t1;Parent=MS.gene035537
chr1.1 exon 37633721 37635929 37633721 ID=MS.gene035537.t1.exon1;Parent=MS.gene035537.t1
chr1.1 CDS 37633721 37635929 37633721 ID=cds.MS.gene035537.t1;Parent=MS.gene035537.t1
Gene Sequence

>MS.gene035537

ATGTCAACCCTCAATCCCCAAATCACTCCCATTTACACCGGAGCACCGCTTCAAACCATACTCGTCCCAAAACCTAAACCTTTTGAGGATTTCTTCACCACCCAAGGTTCCCAAAAACAACCTCATTTCCCTCATGGATATGAACACAACAATCAACCTCATTTCCCTCCTGGATATGAACACAAAAATCAATCAAACCTCTACACTGAGTACTACAACATTCCACAATCTTCCAATGCTACTTCCGATAAATCCCTTTATCATTTTCTCAAAATCGATGATTCCAACAATGCTTTTGCCGCTTCAATGGAGAACTCAGTCAATATTTCCGACCTTGGACTAAATCAGAACCCTAACATGGGGGTGGATTTTGTGGATGATAGAATTGATCAATCTATTGTGCCCATTTCAAAGAAACAAGAATCATGTTCGGCGGTAGCTATGGTTAAGAAAAAGGCAAGTCAGATGCTTGTGAGGGTTTCAGATCTGAGTATGAAGGATCAGATGCATCGCAACATGATGAGGAGAACAAGGATGACTTATGATTCGCTACGTGTGTTGGAAAGTATTGAGGATGAGAAAAGAATTATTGAGGAGAAGAAATTGGCTGATGAAGTTTTTGTGGAGGCAGTGAAGAGATTGGTTGAGGAGAAGATGTTGGATGAGGATAGGATATTTGTTTCTGAAGTTGCGATTATGGAGATGGAGATGGGAGCTGGTGATGAGAACATGGAAGAGGCAGCAACAGGGGTGGAGGGGGAAATGTTGAATGGAAGAAGACATCATAATCATAGTCGTGGTTTCATAAGGGCTGCGAGGTTAATGAAGGACCGAAAGTTATGGTTGCATCGCGATAAAAGGATAGTTGGATCGATACCTGGAGTTTATGTTGGCGATGTTTTCTTGTATATGGTGGAATTATGTGTAATTGGTTTGCATATGCAGATACAAGATGGCATTGATTTTCTTCCTAAAAGTAGGTCTTCCAATGGCGAGCCAATTGCTACTAGTGTGATTGTTTCATGTGGTTATGAGGATGATATGGAATTGGATGATGGTGATGTAATAATCAATACCGGCCATGGAGGAAGAAAGAAGAATTCTTCAATTCAAATTTGTGATCAGAAATTAGAGGGTGGAAACCTTGCTTTGGAGCGTAGTATGCATTACGGGATCGAGATTAGGGTCATTCGTGAGATGAAGTATGAAGGGGGTGCGTCTAGCTCTGGTAAGGTTTATGTTTATGATGGATTATATAGGATTACTGATTGCTGGTTTGAAGAAGGGATGTCTGGTTTTAGAGTTTTTAAGTATAAGTTATTGAGAATTGAGGGGCAAGCTAAGATGGGTAGTGTTGTTCTAAAAAAGGCTAGGGAGATTAAGAAAATTGGGTTGGATGTTAAGCCTATGTATTGTCTTTCTGTTGATATTTCACACAAGAGGGAGAATGTTCCTGTTAGGCTATTTAATGACATAGATGACAATCAAGAACCTCTTTATTATGAGTATCTTCCGAAAACTACTTTTCCGTGGTTTGTGGTTCATCAGAGCGGGAAAGCTACTGGTTGTGAATGTGTGGAGGCTTGTACTGATGGCTGCTTTTGCTCTATGAAGAATGGAGGAGAGTTTCCCTATAATCTTCAGGGTTTGCTTGTGAAAGGGAAGCCTTTGGTTTTTGAATGTGGCCCTTTTTGCTCTTGTCCTCCCAATTGTCGGAATCGTGTTGCACAAAAGGGGATCAAGCATAGGTTGGAAGTGTTCAGGTCTGCGCAAACTGGTTGGGGAGTTACGTCTTTGGATCTTATTCAGGCTGGAGCCTTTATCTGCGAGTATACCGGGGTAATTTTAACAAGGGAACAAGCTCAAATTTTAACAATGAATGGTGACTCGTTAATATATCCAAAACGGTTTATAGATAGATGGGCAGAATGGGGGGATTTGTCTCAGATATATAATAATTATGTTCGTCCATCATATCAATTAATACCTGATATAGATTATTCTATGGATATATCAACATTGCGAAATGTTGCTGGCTATATGAGCCATAGTTGGAGTCCAAATGTATTTGTTCAATTTGTTCTCTATGATCATAACAATCTGATGTTCCCCCGTCTCATGCTATATGCAATGGAGAACATCCCTCCATTGAGAGAACTCAGCATAGACTATGGCATCCCTGACGAGTGGGCGGGCAAGCTATCAATAT
Protein sequence

>MS.gene035537.t1

MSTLNPQITPIYTGAPLQTILVPKPKPFEDFFTTQGSQKQPHFPHGYEHNNQPHFPPGYEHKNQSNLYTEYYNIPQSSNATSDKSLYHFLKIDDSNNAFAASMENSVNISDLGLNQNPNMGVDFVDDRIDQSIVPISKKQESCSAVAMVKKKASQMLVRVSDLSMKDQMHRNMMRRTRMTYDSLRVLESIEDEKRIIEEKKLADEVFVEAVKRLVEEKMLDEDRIFVSEVAIMEMEMGAGDENMEEAATGVEGEMLNGRRHHNHSRGFIRAARLMKDRKLWLHRDKRIVGSIPGVYVGDVFLYMVELCVIGLHMQIQDGIDFLPKSRSSNGEPIATSVIVSCGYEDDMELDDGDVIINTGHGGRKKNSSIQICDQKLEGGNLALERSMHYGIEIRVIREMKYEGGASSSGKVYVYDGLYRITDCWFEEGMSGFRVFKYKLLRIEGQAKMGSVVLKKAREIKKIGLDVKPMYCLSVDISHKRENVPVRLFNDIDDNQEPLYYEYLPKTTFPWFVVHQSGKATGCECVEACTDGCFCSMKNGGEFPYNLQGLLVKGKPLVFECGPFCSCPPNCRNRVAQKGIKHRLEVFRSAQTGWGVTSLDLIQAGAFICEYTGVILTREQAQILTMNGDSLIYPKRFIDRWAEWGDLSQIYNNYVRPSYQLIPDIDYSMDISTLRNVAGYMSHSWSPNVFVQFVLYDHNNLMFPRLMLYAMENIPPLRELSIDYGIPDEWAGKLSI