AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene035579

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene035579.t1 MTR_4g131030 84.574 188 12 1 1 171 1 188 4.22e-111 315
MS.gene035579.t1 MTR_1g047550 83.240 179 30 0 1 179 1 179 1.12e-110 313
MS.gene035579.t1 MTR_8g079502 86.228 167 23 0 1 167 1 167 8.75e-105 298
MS.gene035579.t1 MTR_1g063160 78.212 179 39 0 1 179 1 179 1.51e-100 287
MS.gene035579.t1 MTR_1g054265 78.698 169 36 0 1 169 1 169 3.41e-95 273
MS.gene035579.t1 MTR_8g051580 60.571 175 69 0 1 175 1 175 5.67e-74 220
MS.gene035579.t1 MTR_8g046350 58.333 168 64 2 1 168 1 162 1.17e-63 193
MS.gene035579.t1 MTR_4g094632 40.854 164 85 3 1 164 1 152 1.31e-34 119
MS.gene035579.t1 MTR_3g080940 40.588 170 82 4 1 157 8 171 4.51e-31 112
MS.gene035579.t1 MTR_3g052870 41.304 138 78 2 2 136 9 146 9.52e-30 108
MS.gene035579.t1 MTR_4g094638 43.357 143 76 3 1 140 1 141 1.82e-29 107
MS.gene035579.t1 MTR_1g106070 46.535 101 52 1 2 100 9 109 5.62e-27 100
MS.gene035579.t1 MTR_1g105920 47.525 101 51 1 2 100 9 109 1.78e-26 100
MS.gene035579.t1 MTR_3g052920 47.525 101 51 1 2 100 9 109 5.90e-26 99.8
MS.gene035579.t1 MTR_5g045560 35.329 167 90 4 1 152 8 171 2.93e-25 97.8
MS.gene035579.t1 MTR_1g012570 40.650 123 70 2 2 122 9 130 3.54e-25 97.8
MS.gene035579.t1 MTR_1g105910 46.535 101 52 1 2 100 9 109 3.73e-25 97.4
MS.gene035579.t1 MTR_8g043650 47.525 101 51 1 2 100 9 109 1.42e-24 95.9
MS.gene035579.t1 MTR_2g105290 41.964 112 63 1 1 112 11 120 1.74e-24 94.4
MS.gene035579.t1 MTR_0121s0100 45.545 101 53 1 2 100 9 109 2.28e-24 92.8
MS.gene035579.t1 MTR_1g077360 45.545 101 53 1 2 100 9 109 2.76e-24 95.1
MS.gene035579.t1 MTR_2g030740 35.714 154 87 2 2 143 9 162 3.72e-24 95.1
MS.gene035579.t1 MTR_1g108580 44.554 101 54 1 2 100 9 109 6.42e-24 94.0
MS.gene035579.t1 MTR_1g108510 45.545 101 53 1 2 100 9 109 7.53e-24 94.0
MS.gene035579.t1 MTR_3g030770 45.545 101 53 1 2 100 9 109 1.11e-23 93.6
MS.gene035579.t1 MTR_1g075600 56.164 73 32 0 2 74 9 81 3.46e-23 92.4
MS.gene035579.t1 MTR_2g093190 44.144 111 59 2 2 110 9 118 6.87e-23 91.3
MS.gene035579.t1 MTR_5g053390 53.521 71 33 0 2 72 9 79 2.33e-22 90.1
MS.gene035579.t1 MTR_7g028448 37.121 132 71 2 14 139 24 149 2.83e-22 88.2
MS.gene035579.t1 MTR_4g036915 37.121 132 71 2 14 139 24 149 2.83e-22 88.2
MS.gene035579.t1 MTR_5g055100 50.649 77 38 0 2 78 9 85 5.08e-22 89.4
MS.gene035579.t1 MTR_3g030780 47.436 78 41 0 2 79 9 86 6.00e-22 86.7
MS.gene035579.t1 MTR_1g105905 37.681 138 74 2 18 143 8 145 7.39e-22 88.6
MS.gene035579.t1 MTR_2g085280 50.000 78 39 0 2 79 9 86 1.35e-21 88.2
MS.gene035579.t1 MTR_2g085250 50.000 78 39 0 2 79 9 86 1.41e-21 88.2
MS.gene035579.t1 MTR_8g086290 42.342 111 57 3 2 110 12 117 2.33e-21 86.3
MS.gene035579.t1 MTR_0121s0080 43.564 101 55 1 2 100 9 109 8.34e-21 86.3
MS.gene035579.t1 MTR_2g017865 41.346 104 58 1 1 104 16 116 1.01e-19 83.6
MS.gene035579.t1 MTR_0003s0590 50.725 69 34 0 1 69 1 69 1.84e-19 82.8
MS.gene035579.t1 MTR_5g021270 50.000 64 32 0 1 64 1 64 6.46e-19 80.9
MS.gene035579.t1 MTR_5g021270 50.000 64 32 0 1 64 1 64 6.57e-19 80.9
MS.gene035579.t1 MTR_8g087860 39.423 104 60 1 1 104 17 117 1.39e-18 80.5
MS.gene035579.t1 MTR_7g062350 48.571 70 36 0 10 79 29 98 3.55e-18 79.3
MS.gene035579.t1 MTR_1g053070 49.275 69 35 0 1 69 1 69 6.24e-18 78.6
MS.gene035579.t1 MTR_3g452380 50.725 69 34 0 1 69 16 84 1.14e-17 77.8
MS.gene035579.t1 MTR_5g066180 47.222 72 38 0 1 72 1 72 1.18e-17 77.4
MS.gene035579.t1 MTR_2g009890 39.091 110 66 1 1 110 1 109 1.21e-17 78.6
MS.gene035579.t1 MTR_3g005530 50.725 69 34 0 1 69 1 69 1.44e-17 77.4
MS.gene035579.t1 MTR_4g127140 50.000 80 40 0 1 80 11 90 1.94e-17 76.3
MS.gene035579.t1 MTR_8g033270 47.826 69 36 0 1 69 1 69 7.26e-17 75.9
MS.gene035579.t1 MTR_7g075870 36.538 104 63 1 1 104 1 101 2.03e-16 73.9
MS.gene035579.t1 MTR_5g066960 51.667 60 29 0 1 60 1 60 2.06e-16 70.1
MS.gene035579.t1 MTR_8g033220 43.678 87 44 1 1 82 1 87 2.35e-16 73.9
MS.gene035579.t1 MTR_8g033220 49.275 69 35 0 1 69 1 69 2.70e-16 73.9
MS.gene035579.t1 MTR_4g102530 46.377 69 37 0 1 69 1 69 6.62e-16 72.4
MS.gene035579.t1 MTR_1g101970 45.070 71 39 0 1 71 1 71 7.08e-16 72.0
MS.gene035579.t1 MTR_4g109810 34.351 131 71 3 1 116 1 131 7.97e-16 72.8
MS.gene035579.t1 MTR_1g038300 47.887 71 35 1 1 69 1 71 8.93e-16 72.8
MS.gene035579.t1 MTR_4g093970 49.231 65 33 0 1 65 27 91 1.06e-15 72.4
MS.gene035579.t1 MTR_3g067910 49.123 57 29 0 18 74 6 62 1.66e-15 68.9
MS.gene035579.t1 MTR_3g067875 56.250 48 21 0 18 65 8 55 2.16e-15 67.8
MS.gene035579.t1 MTR_5g031000 46.377 69 37 0 1 69 1 69 2.22e-15 71.6
MS.gene035579.t1 MTR_1g108500 61.702 47 18 0 18 64 113 159 2.43e-15 72.8
MS.gene035579.t1 MTR_5g031000 46.377 69 37 0 1 69 1 69 2.75e-15 71.2
MS.gene035579.t1 MTR_7g075870 51.724 58 28 0 1 58 1 58 2.80e-15 70.9
MS.gene035579.t1 MTR_2g461710 49.123 57 29 0 1 57 1 57 2.91e-15 67.0
MS.gene035579.t1 MTR_4g084740 52.113 71 33 1 1 70 1 71 3.62e-15 72.4
MS.gene035579.t1 MTR_6g464720 33.333 138 84 4 1 134 1 134 3.80e-15 71.2
MS.gene035579.t1 MTR_5g046870 50.877 57 28 0 1 57 1 57 1.02e-14 67.4
MS.gene035579.t1 MTR_5g046790 46.552 58 31 0 1 58 1 58 1.28e-14 69.3
MS.gene035579.t1 MTR_7g016600 50.877 57 28 0 1 57 1 57 1.29e-14 69.7
MS.gene035579.t1 MTR_3g113030 48.333 60 31 0 1 60 1 60 2.16e-14 68.9
MS.gene035579.t1 MTR_3g102570 45.070 71 38 1 1 70 1 71 2.31e-14 69.7
MS.gene035579.t1 MTR_4g109830 40.000 70 41 1 1 69 1 70 2.85e-14 68.6
MS.gene035579.t1 MTR_3g084980 52.632 57 27 0 1 57 1 57 2.97e-14 68.9
MS.gene035579.t1 MTR_4g036050 45.833 72 38 1 1 71 1 72 3.36e-14 67.8
MS.gene035579.t1 MTR_4g093030 52.632 57 27 0 1 57 1 57 3.79e-14 67.0
MS.gene035579.t1 MTR_4g036050 45.833 72 38 1 1 71 1 72 3.80e-14 67.8
MS.gene035579.t1 MTR_4g036050 45.833 72 38 1 1 71 1 72 3.83e-14 67.0
MS.gene035579.t1 MTR_4g036050 45.833 72 38 1 1 71 1 72 3.93e-14 67.4
MS.gene035579.t1 MTR_8g097090 50.877 57 28 0 1 57 1 57 3.94e-14 68.6
MS.gene035579.t1 MTR_5g032150 49.123 57 29 0 1 57 1 57 4.02e-14 68.2
MS.gene035579.t1 MTR_5g032520 49.123 57 29 0 1 57 1 57 4.35e-14 68.2
MS.gene035579.t1 MTR_6g015975 50.877 57 28 0 1 57 1 57 5.47e-14 68.2
MS.gene035579.t1 MTR_7g016630 35.227 88 51 2 1 82 1 88 5.62e-14 68.2
MS.gene035579.t1 MTR_1g041615 65.909 44 15 0 15 58 19 62 6.24e-14 65.9
MS.gene035579.t1 MTR_8g066260 46.552 58 31 0 1 58 1 58 9.12e-14 67.4
MS.gene035579.t1 MTR_7g075850 46.479 71 36 1 1 69 1 71 9.85e-14 67.4
MS.gene035579.t1 MTR_1g029670 32.432 111 64 3 1 105 1 106 1.09e-13 66.2
MS.gene035579.t1 MTR_3g088615 38.462 65 40 0 1 65 1 65 1.35e-13 65.9
MS.gene035579.t1 MTR_5g041650 50.000 54 27 0 1 54 38 91 1.21e-12 65.5
MS.gene035579.t1 MTR_3g067870 48.077 52 27 0 18 69 92 143 4.72e-12 61.2
MS.gene035579.t1 MTR_3g109930 42.857 63 36 0 11 73 11 73 4.83e-12 61.6
MS.gene035579.t1 MTR_8g022970 38.824 85 44 1 3 87 19 95 9.51e-12 60.8
MS.gene035579.t1 MTR_4g108720 38.961 77 45 1 1 75 1 77 1.23e-11 62.4
MS.gene035579.t1 MTR_3g437790 33.684 95 60 2 19 112 30 122 2.31e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene035579.t1 AT2G34440 44.767 172 83 5 1 161 1 171 4.25e-41 136
MS.gene035579.t1 AT3G66656 42.373 177 87 4 1 162 1 177 2.73e-32 114
MS.gene035579.t1 AT2G24840 35.329 167 87 3 1 150 62 224 1.13e-29 110
MS.gene035579.t1 AT5G60440 39.490 157 76 3 2 154 7 148 1.89e-27 105
MS.gene035579.t1 AT1G01530 42.143 140 77 2 1 140 6 141 4.74e-25 97.4
MS.gene035579.t1 AT3G57230 40.909 110 64 1 1 110 1 109 3.94e-21 84.7
MS.gene035579.t1 AT1G65360 37.168 113 71 0 1 113 6 118 6.45e-21 86.3
MS.gene035579.t1 AT5G13790 42.857 98 49 1 1 98 1 91 6.56e-21 87.0
MS.gene035579.t1 AT1G47760 50.649 77 36 1 1 77 1 75 8.75e-21 85.1
MS.gene035579.t1 AT4G36590 42.969 128 61 5 2 120 7 131 2.02e-20 85.5
MS.gene035579.t1 AT3G57230 40.909 110 64 1 1 110 1 109 2.04e-20 85.1
MS.gene035579.t1 AT3G57230 40.909 110 64 1 1 110 1 109 2.04e-20 85.1
MS.gene035579.t1 AT1G72350 43.846 130 62 4 2 131 43 161 4.21e-20 84.0
MS.gene035579.t1 AT3G04100 35.915 142 68 4 2 138 14 137 1.87e-19 82.0
MS.gene035579.t1 AT5G13790 50.725 69 34 0 1 69 1 69 2.24e-19 83.2
MS.gene035579.t1 AT3G57390 50.725 69 34 0 1 69 1 69 7.94e-19 80.9
MS.gene035579.t1 AT3G61120 47.826 69 36 0 1 69 1 69 1.16e-18 80.5
MS.gene035579.t1 AT3G57390 50.725 69 34 0 1 69 1 69 1.46e-18 80.5
MS.gene035579.t1 AT4G37940 33.333 156 93 3 1 156 1 145 2.61e-18 78.2
MS.gene035579.t1 AT4G37940 39.091 110 66 1 1 110 1 109 4.12e-18 79.0
MS.gene035579.t1 AT4G37940 35.821 134 80 2 1 134 1 128 4.18e-18 78.6
MS.gene035579.t1 AT4G22950 49.275 69 35 0 1 69 1 69 5.40e-18 77.4
MS.gene035579.t1 AT5G51860 44.578 83 46 0 1 83 1 83 5.82e-18 77.8
MS.gene035579.t1 AT5G51860 44.578 83 46 0 1 83 1 83 6.01e-18 78.2
MS.gene035579.t1 AT5G51870 37.037 108 58 2 1 104 1 102 8.40e-18 77.8
MS.gene035579.t1 AT4G09960 50.725 69 34 0 1 69 2 70 8.61e-18 78.2
MS.gene035579.t1 AT4G09960 50.725 69 34 0 1 69 1 69 9.11e-18 78.2
MS.gene035579.t1 AT4G09960 50.725 69 34 0 1 69 1 69 9.29e-18 77.8
MS.gene035579.t1 AT5G51870 37.037 108 58 2 1 104 1 102 9.77e-18 76.6
MS.gene035579.t1 AT4G09960 50.725 69 34 0 1 69 11 79 1.24e-17 77.8
MS.gene035579.t1 AT5G51870 37.037 108 58 2 1 104 24 125 1.41e-17 76.6
MS.gene035579.t1 AT5G51870 37.037 108 58 2 1 104 1 102 1.46e-17 77.4
MS.gene035579.t1 AT2G22630 37.273 110 68 1 1 110 1 109 1.49e-17 77.4
MS.gene035579.t1 AT2G22630 37.273 110 68 1 1 110 1 109 1.49e-17 77.4
MS.gene035579.t1 AT2G45650 49.275 69 35 0 1 69 1 69 1.61e-17 77.8
MS.gene035579.t1 AT4G09960 50.725 69 34 0 1 69 27 95 1.91e-17 77.8
MS.gene035579.t1 AT4G09960 50.725 69 34 0 1 69 96 164 1.92e-17 78.6
MS.gene035579.t1 AT5G51870 37.037 108 58 2 1 104 11 112 2.90e-17 76.6
MS.gene035579.t1 AT2G45660 35.185 108 67 2 1 108 1 105 3.13e-17 75.1
MS.gene035579.t1 AT3G58780 38.679 106 62 1 1 106 16 118 3.19e-17 77.0
MS.gene035579.t1 AT3G58780 38.679 106 62 1 1 106 22 124 3.41e-17 77.0
MS.gene035579.t1 AT2G42830 38.679 106 62 1 1 106 16 118 3.78e-17 76.6
MS.gene035579.t1 AT2G42830 38.679 106 62 1 1 106 16 118 3.93e-17 76.6
MS.gene035579.t1 AT1G29962 44.444 72 40 0 2 73 8 79 4.58e-17 75.1
MS.gene035579.t1 AT4G22950 49.275 69 35 0 1 69 1 69 4.93e-17 75.9
MS.gene035579.t1 AT4G22950 49.275 69 35 0 1 69 1 69 4.93e-17 75.9
MS.gene035579.t1 AT3G58780 38.679 106 62 1 1 106 16 118 5.86e-17 76.6
MS.gene035579.t1 AT5G65070 44.872 78 41 1 1 78 1 76 7.32e-17 73.6
MS.gene035579.t1 AT1G28460 44.928 69 38 0 2 70 8 76 1.08e-16 74.3
MS.gene035579.t1 AT2G45660 35.185 108 67 2 1 108 1 105 1.72e-16 74.3
MS.gene035579.t1 AT5G65070 51.724 58 28 0 1 58 1 58 2.08e-16 73.9
MS.gene035579.t1 AT5G20240 40.000 100 54 3 1 100 1 94 2.39e-16 72.4
MS.gene035579.t1 AT5G62165 33.654 104 66 1 1 104 1 101 3.04e-16 72.4
MS.gene035579.t1 AT5G62165 33.654 104 66 1 1 104 1 101 3.04e-16 72.4
MS.gene035579.t1 AT5G62165 33.654 104 66 1 1 104 1 101 3.04e-16 72.4
MS.gene035579.t1 AT5G65070 50.769 65 30 1 1 63 1 65 3.33e-16 73.9
MS.gene035579.t1 AT3G58780 43.023 86 36 1 1 73 16 101 3.36e-16 73.9
MS.gene035579.t1 AT5G10140 52.632 57 27 0 1 57 1 57 3.80e-16 72.4
MS.gene035579.t1 AT1G17310 58.621 58 22 1 17 74 63 118 3.98e-16 73.6
MS.gene035579.t1 AT5G62165 33.654 104 66 1 1 104 1 101 4.52e-16 72.0
MS.gene035579.t1 AT5G62165 33.654 104 66 1 1 104 1 101 4.52e-16 72.0
MS.gene035579.t1 AT5G62165 33.654 104 66 1 1 104 1 101 4.52e-16 72.0
MS.gene035579.t1 AT5G62165 33.654 104 66 1 1 104 1 101 4.52e-16 72.0
MS.gene035579.t1 AT5G62165 33.654 104 66 1 1 104 1 101 4.52e-16 72.0
MS.gene035579.t1 AT1G17310 58.621 58 22 1 17 74 74 129 5.09e-16 73.2
MS.gene035579.t1 AT5G62165 41.667 84 45 1 1 80 1 84 5.30e-16 70.5
MS.gene035579.t1 AT5G10140 52.632 57 27 0 1 57 1 57 6.02e-16 72.0
MS.gene035579.t1 AT5G10140 51.724 58 28 0 1 58 1 58 6.72e-16 72.0
MS.gene035579.t1 AT5G65070 51.724 58 28 0 1 58 1 58 6.97e-16 73.2
MS.gene035579.t1 AT5G10140 52.632 57 27 0 1 57 1 57 8.00e-16 72.0
MS.gene035579.t1 AT4G24540 33.028 109 69 1 1 105 1 109 8.36e-16 72.4
MS.gene035579.t1 AT5G20240 40.000 100 54 3 1 100 1 94 8.99e-16 72.4
MS.gene035579.t1 AT1G77980 52.113 71 33 1 1 70 1 71 1.05e-15 73.9
MS.gene035579.t1 AT5G65070 51.724 58 28 0 1 58 1 58 1.18e-15 72.0
MS.gene035579.t1 AT4G11880 53.448 58 27 0 1 58 1 58 1.25e-15 71.2
MS.gene035579.t1 AT4G11880 53.448 58 27 0 1 58 1 58 1.25e-15 71.2
MS.gene035579.t1 AT5G62165 44.928 69 38 0 1 69 1 69 1.35e-15 72.0
MS.gene035579.t1 AT5G62165 44.928 69 38 0 1 69 1 69 1.35e-15 72.0
MS.gene035579.t1 AT5G62165 44.928 69 38 0 1 69 1 69 1.35e-15 72.0
MS.gene035579.t1 AT5G62165 41.667 84 45 1 1 80 1 84 1.48e-15 71.6
MS.gene035579.t1 AT5G62165 41.667 84 45 1 1 80 1 84 1.48e-15 71.6
MS.gene035579.t1 AT2G22540 44.928 69 38 0 1 69 1 69 1.49e-15 72.4
MS.gene035579.t1 AT2G22540 44.928 69 38 0 1 69 1 69 1.49e-15 72.4
MS.gene035579.t1 AT4G18960 48.529 68 35 0 2 69 18 85 1.71e-15 72.4
MS.gene035579.t1 AT1G71692 47.222 72 37 1 1 71 1 72 2.15e-15 71.2
MS.gene035579.t1 AT2G14210 53.448 58 27 0 1 58 1 58 2.53e-15 71.6
MS.gene035579.t1 AT3G58780 54.237 59 27 0 1 59 16 74 2.68e-15 72.0
MS.gene035579.t1 AT1G22130 50.704 71 34 1 1 70 1 71 2.95e-15 72.4
MS.gene035579.t1 AT2G14210 53.448 58 27 0 1 58 1 58 3.16e-15 71.2
MS.gene035579.t1 AT3G30260 38.053 113 62 3 1 105 1 113 3.81e-15 71.2
MS.gene035579.t1 AT5G65080 41.026 78 44 1 1 76 8 85 3.84e-15 70.1
MS.gene035579.t1 AT4G11880 53.448 58 27 0 1 58 1 58 3.88e-15 70.9
MS.gene035579.t1 AT4G11880 53.448 58 27 0 1 58 1 58 3.88e-15 70.9
MS.gene035579.t1 AT1G46408 38.931 131 66 6 1 118 1 130 3.96e-15 71.6
MS.gene035579.t1 AT2G03710 54.386 57 26 0 1 57 1 57 4.26e-15 70.1
MS.gene035579.t1 AT3G54340 39.286 84 36 1 1 69 1 84 4.29e-15 70.9
MS.gene035579.t1 AT1G77950 37.209 172 87 10 1 155 1 168 4.65e-15 71.2
MS.gene035579.t1 AT1G77950 37.209 172 87 10 1 155 1 168 4.65e-15 71.2
MS.gene035579.t1 AT1G77950 37.209 172 87 10 1 155 1 168 4.65e-15 71.2
MS.gene035579.t1 AT1G77950 37.209 172 87 10 1 155 1 168 4.65e-15 71.2
MS.gene035579.t1 AT2G22540 52.727 55 26 0 1 55 1 55 1.53e-14 69.3
MS.gene035579.t1 AT5G65060 54.545 55 25 0 1 55 1 55 1.67e-14 68.6
MS.gene035579.t1 AT5G65050 52.727 55 26 0 1 55 1 55 1.82e-14 68.2
MS.gene035579.t1 AT5G23260 57.895 57 24 0 1 57 1 57 1.84e-14 69.3
MS.gene035579.t1 AT2G03710 54.386 57 26 0 1 57 1 57 1.89e-14 69.7
MS.gene035579.t1 AT5G23260 57.895 57 24 0 1 57 17 73 2.01e-14 69.7
MS.gene035579.t1 AT2G03710 54.386 57 26 0 1 57 1 57 2.01e-14 69.3
MS.gene035579.t1 AT5G23260 57.895 57 24 0 1 57 1 57 2.17e-14 68.9
MS.gene035579.t1 AT5G23260 57.895 57 24 0 1 57 17 73 2.17e-14 69.3
MS.gene035579.t1 AT5G65060 54.545 55 25 0 1 55 1 55 2.57e-14 67.8
MS.gene035579.t1 AT5G65060 54.545 55 25 0 1 55 1 55 2.75e-14 68.2
MS.gene035579.t1 AT1G24260 38.144 97 55 1 1 97 1 92 2.91e-14 68.9
MS.gene035579.t1 AT5G15800 50.877 57 28 0 1 57 1 57 3.06e-14 68.9
MS.gene035579.t1 AT3G02310 50.877 57 28 0 1 57 1 57 3.47e-14 67.8
MS.gene035579.t1 AT1G26310 48.276 58 30 0 1 58 1 58 3.54e-14 68.9
MS.gene035579.t1 AT1G24260 38.144 97 55 1 1 97 1 92 3.60e-14 68.6
MS.gene035579.t1 AT5G15800 50.877 57 28 0 1 57 1 57 4.68e-14 68.6
MS.gene035579.t1 AT1G69120 48.276 58 30 0 1 58 1 58 4.81e-14 68.2
MS.gene035579.t1 AT5G60910 47.368 57 30 0 1 57 1 57 5.59e-14 68.2
MS.gene035579.t1 AT5G65050 52.727 55 26 0 1 55 1 55 5.67e-14 67.0
MS.gene035579.t1 AT5G65050 52.727 55 26 0 1 55 1 55 5.86e-14 67.0
MS.gene035579.t1 AT5G65050 52.727 55 26 0 1 55 1 55 5.91e-14 67.0
MS.gene035579.t1 AT1G24260 50.877 57 28 0 1 57 1 57 7.24e-14 67.8
MS.gene035579.t1 AT4G37435 28.261 184 85 4 1 150 1 171 7.49e-14 66.6
MS.gene035579.t1 AT3G02310 50.877 57 28 0 1 57 1 57 7.69e-14 67.8
MS.gene035579.t1 AT5G65080 43.478 69 38 1 1 69 8 75 8.29e-14 67.0
MS.gene035579.t1 AT1G69120 48.276 58 30 0 1 58 1 58 9.66e-14 67.4
MS.gene035579.t1 AT1G18750 42.857 77 42 1 1 75 1 77 1.13e-13 68.2
MS.gene035579.t1 AT1G18750 42.857 77 42 1 1 75 1 77 1.16e-13 68.2
MS.gene035579.t1 AT1G18750 42.857 77 42 1 1 75 1 77 1.30e-13 68.2
MS.gene035579.t1 AT1G69540 43.421 76 42 1 1 75 1 76 2.78e-13 67.0
MS.gene035579.t1 AT1G69540 43.421 76 42 1 1 75 1 76 3.26e-13 67.0
MS.gene035579.t1 AT1G28450 38.356 73 45 0 2 74 8 80 5.22e-13 64.3
MS.gene035579.t1 AT5G49420 34.043 141 78 4 3 133 8 143 1.10e-12 65.5
MS.gene035579.t1 AT1G60920 40.698 86 45 3 3 82 5 90 2.03e-12 63.2
MS.gene035579.t1 AT5G04640 42.667 75 39 2 3 73 5 79 2.33e-12 64.3
MS.gene035579.t1 AT2G03060 44.156 77 41 2 1 75 1 77 4.19e-12 63.9
MS.gene035579.t1 AT2G03060 44.156 77 41 2 1 75 1 77 4.57e-12 63.5
MS.gene035579.t1 AT2G03060 44.156 77 41 2 1 75 1 77 4.57e-12 63.5
MS.gene035579.t1 AT2G03060 44.156 77 41 2 1 75 1 77 4.57e-12 63.5
MS.gene035579.t1 AT5G49490 34.532 139 80 4 3 132 46 182 7.10e-12 62.8
MS.gene035579.t1 AT2G26320 34.524 84 49 1 1 78 17 100 2.86e-11 58.2
MS.gene035579.t1 AT5G38620 40.278 72 39 1 3 70 6 77 3.25e-11 61.2
MS.gene035579.t1 AT1G77080 66.667 39 13 0 1 39 1 39 5.56e-11 58.9
MS.gene035579.t1 AT1G77080 66.667 39 13 0 1 39 1 39 6.27e-11 58.5

Find 36 sgRNAs with CRISPR-Local

Find 45 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGAATCGACCTTACTCTTT+TGG 0.284342 8.1:-2575670 MS.gene035579:CDS
CCTTGGGAATCACTTGGTTC+AGG 0.292476 8.1:+2575601 None:intergenic
TGAAGTGTTGGCACAAATTC+GGG 0.328856 8.1:-2575527 MS.gene035579:CDS
ATATAAAGAGCTTCACGATT+TGG 0.333750 8.1:-2575416 MS.gene035579:CDS
ATGAAGTGTTGGCACAAATT+CGG 0.337355 8.1:-2575528 MS.gene035579:CDS
CATCAGAGGCGGGGTTCCCT+TGG 0.347497 8.1:+2575584 None:intergenic
CACTTGGTTCAGGCTCTTGT+TGG 0.351803 8.1:+2575611 None:intergenic
GAAATTACGTCTTAGTGATA+TGG 0.374504 8.1:-2575392 MS.gene035579:CDS
GATCTCTGCTCCGCACAAAA+TGG 0.391172 8.1:+2575714 None:intergenic
GCAGCAACAACATCAATTCC+TGG 0.405755 8.1:+2575643 None:intergenic
AGGCTCTTGTTGGAGATACT+TGG 0.417524 8.1:+2575621 None:intergenic
CTTTCTTGAATAAACCTGTT+CGG 0.422634 8.1:+2575749 None:intergenic
ACATTCTCAAAACGCCGAAC+AGG 0.455680 8.1:-2575763 MS.gene035579:CDS
CTTGCTTCAGAATCTCATCA+TGG 0.463297 8.1:+2575482 None:intergenic
ATCAGAGGCGGGGTTCCCTT+GGG 0.466571 8.1:+2575585 None:intergenic
CAGAATCTCATCATGGGTCT+CGG 0.474100 8.1:+2575489 None:intergenic
AATGTGACCTGCCTCGTGTT+GGG 0.485158 8.1:+2575781 None:intergenic
ATATTGGGTGCATCAGAGGC+GGG 0.488127 8.1:+2575574 None:intergenic
TTCTATATTGGGTGCATCAG+AGG 0.498428 8.1:+2575570 None:intergenic
ATCTCTCAATTCTTTAAGCT+CGG 0.500207 8.1:+2575441 None:intergenic
AAAGAGTAAGGTCGATTCCC+AGG 0.524951 8.1:+2575673 None:intergenic
TTGCTTCAGAATCTCATCAT+GGG 0.526253 8.1:+2575483 None:intergenic
GAAAGATCCCAACACGAGGC+AGG 0.532566 8.1:-2575788 MS.gene035579:CDS
CCTGGGTGACCAAAAGAGTA+AGG 0.535714 8.1:+2575661 None:intergenic
TATATTGGGTGCATCAGAGG+CGG 0.542480 8.1:+2575573 None:intergenic
GGGTTCCCTTGGGAATCACT+TGG 0.548832 8.1:+2575595 None:intergenic
GAATGTGACCTGCCTCGTGT+TGG 0.574867 8.1:+2575780 None:intergenic
CAGCAACAACATCAATTCCT+GGG 0.584319 8.1:+2575644 None:intergenic
TTTAGCTCAGGATCCAGTGG+TGG 0.589768 8.1:-2575347 MS.gene035579:CDS
TATTGGGTGCATCAGAGGCG+GGG 0.600666 8.1:+2575575 None:intergenic
TTAGCTCAGGATCCAGTGGT+GGG 0.603917 8.1:-2575346 MS.gene035579:CDS
TCTAGAACTTGATGAAGTGT+TGG 0.605039 8.1:-2575539 MS.gene035579:CDS
CCTGAACCAAGTGATTCCCA+AGG 0.649130 8.1:-2575601 MS.gene035579:CDS
GTGTTGGCACAAATTCGGGA+AGG 0.674614 8.1:-2575523 MS.gene035579:CDS
CTGAACCAAGTGATTCCCAA+GGG 0.694896 8.1:-2575600 MS.gene035579:CDS
TCGTGAAAGATCCCAACACG+AGG 0.703551 8.1:-2575792 MS.gene035579:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGATTCAATTTTTCTATATT+GGG + chr8.1:2575567-2575586 None:intergenic 15.0%
!!! TAGATTCAATTTTTCTATAT+TGG + chr8.1:2575568-2575587 None:intergenic 15.0%
ATATAAAGAGCTTCACGATT+TGG - chr8.1:2575707-2575726 MS.gene035579:CDS 30.0%
ATCTCTCAATTCTTTAAGCT+CGG + chr8.1:2575685-2575704 None:intergenic 30.0%
CTTTCTTGAATAAACCTGTT+CGG + chr8.1:2575377-2575396 None:intergenic 30.0%
GAAATTACGTCTTAGTGATA+TGG - chr8.1:2575731-2575750 MS.gene035579:CDS 30.0%
TTGCTTCAGAATCTCATCAT+GGG + chr8.1:2575643-2575662 None:intergenic 35.0%
! AATGAGTTGTCCATTTTGTG+CGG - chr8.1:2575399-2575418 MS.gene035579:CDS 35.0%
! CTATTGTTGTGTTTTCTCCT+GGG - chr8.1:2575433-2575452 MS.gene035579:CDS 35.0%
! TCTAGAACTTGATGAAGTGT+TGG - chr8.1:2575584-2575603 MS.gene035579:CDS 35.0%
! TTTTCTTTTATTCCCACCAC+TGG + chr8.1:2575792-2575811 None:intergenic 35.0%
!! ATGAAGTGTTGGCACAAATT+CGG - chr8.1:2575595-2575614 MS.gene035579:CDS 35.0%
CAGCAACAACATCAATTCCT+GGG + chr8.1:2575482-2575501 None:intergenic 40.0%
CTTGCTTCAGAATCTCATCA+TGG + chr8.1:2575644-2575663 None:intergenic 40.0%
TTCTATATTGGGTGCATCAG+AGG + chr8.1:2575556-2575575 None:intergenic 40.0%
! GCTATTGTTGTGTTTTCTCC+TGG - chr8.1:2575432-2575451 MS.gene035579:CDS 40.0%
!! TGAAGTGTTGGCACAAATTC+GGG - chr8.1:2575596-2575615 MS.gene035579:CDS 40.0%
!!! ATGCATGATGCTTTTAGCTC+AGG - chr8.1:2575764-2575783 MS.gene035579:CDS 40.0%
ACATTCTCAAAACGCCGAAC+AGG - chr8.1:2575360-2575379 MS.gene035579:CDS 45.0%
AGGCTCTTGTTGGAGATACT+TGG + chr8.1:2575505-2575524 None:intergenic 45.0%
CAGAATCTCATCATGGGTCT+CGG + chr8.1:2575637-2575656 None:intergenic 45.0%
CTGAACCAAGTGATTCCCAA+GGG - chr8.1:2575523-2575542 MS.gene035579:CDS 45.0%
GCAGCAACAACATCAATTCC+TGG + chr8.1:2575483-2575502 None:intergenic 45.0%
TATATTGGGTGCATCAGAGG+CGG + chr8.1:2575553-2575572 None:intergenic 45.0%
! AAAGAGTAAGGTCGATTCCC+AGG + chr8.1:2575453-2575472 None:intergenic 45.0%
! GGGAATCGACCTTACTCTTT+TGG - chr8.1:2575453-2575472 MS.gene035579:CDS 45.0%
AATGTGACCTGCCTCGTGTT+GGG + chr8.1:2575345-2575364 None:intergenic 50.0%
ATATTGGGTGCATCAGAGGC+GGG + chr8.1:2575552-2575571 None:intergenic 50.0%
CACTTGGTTCAGGCTCTTGT+TGG + chr8.1:2575515-2575534 None:intergenic 50.0%
CCTGAACCAAGTGATTCCCA+AGG - chr8.1:2575522-2575541 MS.gene035579:CDS 50.0%
CCTGGGTGACCAAAAGAGTA+AGG + chr8.1:2575465-2575484 None:intergenic 50.0%
CCTTGGGAATCACTTGGTTC+AGG + chr8.1:2575525-2575544 None:intergenic 50.0%
GATCTCTGCTCCGCACAAAA+TGG + chr8.1:2575412-2575431 None:intergenic 50.0%
TCGTGAAAGATCCCAACACG+AGG - chr8.1:2575331-2575350 MS.gene035579:CDS 50.0%
TTAGCTCAGGATCCAGTGGT+GGG - chr8.1:2575777-2575796 MS.gene035579:CDS 50.0%
! CCTTACTCTTTTGGTCACCC+AGG - chr8.1:2575462-2575481 MS.gene035579:CDS 50.0%
! GTGTTGGCACAAATTCGGGA+AGG - chr8.1:2575600-2575619 MS.gene035579:CDS 50.0%
! TTTAGCTCAGGATCCAGTGG+TGG - chr8.1:2575776-2575795 MS.gene035579:CDS 50.0%
!!! GCTTTTAGCTCAGGATCCAG+TGG - chr8.1:2575773-2575792 MS.gene035579:CDS 50.0%
GAAAGATCCCAACACGAGGC+AGG - chr8.1:2575335-2575354 MS.gene035579:CDS 55.0%
GAATGTGACCTGCCTCGTGT+TGG + chr8.1:2575346-2575365 None:intergenic 55.0%
GGGTTCCCTTGGGAATCACT+TGG + chr8.1:2575531-2575550 None:intergenic 55.0%
TATTGGGTGCATCAGAGGCG+GGG + chr8.1:2575551-2575570 None:intergenic 55.0%
ATCAGAGGCGGGGTTCCCTT+GGG + chr8.1:2575541-2575560 None:intergenic 60.0%
CATCAGAGGCGGGGTTCCCT+TGG + chr8.1:2575542-2575561 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 2575303 2575842 2575303 ID=MS.gene035579
chr8.1 mRNA 2575303 2575842 2575303 ID=MS.gene035579.t1;Parent=MS.gene035579
chr8.1 exon 2575303 2575842 2575303 ID=MS.gene035579.t1.exon1;Parent=MS.gene035579.t1
chr8.1 CDS 2575303 2575842 2575303 ID=cds.MS.gene035579.t1;Parent=MS.gene035579.t1
Gene Sequence

>MS.gene035579

ATGGGTCGTCGCAAAATTGAGATTGAGATCGTGAAAGATCCCAACACGAGGCAGGTCACATTCTCAAAACGCCGAACAGGTTTATTCAAGAAAGCAAATGAGTTGTCCATTTTGTGCGGAGCAGAGATCGCTATTGTTGTGTTTTCTCCTGGGAATCGACCTTACTCTTTTGGTCACCCAGGAATTGATGTTGTTGCTGCCAAGTATCTCCAACAAGAGCCTGAACCAAGTGATTCCCAAGGGAACCCCGCCTCTGATGCACCCAATATAGAAAAATTGAATCTAGAACTTGATGAAGTGTTGGCACAAATTCGGGAAGGTGAAAAGCAGACCGAGACCCATGATGAGATTCTGAAGCAAGACAATGTGATGAAACTCTCCGAGCTTAAAGAATTGAGAGATTCATATAAAGAGCTTCACGATTTGGTGAAATTACGTCTTAGTGATATGGAGATATCAGAATGCATGATGCTTTTAGCTCAGGATCCAGTGGTGGGAATAAAAGAAAAATCTGCAAGAAAGAAAAGAAGAAAAAATTAA
Protein sequence

>MS.gene035579.t1

MGRRKIEIEIVKDPNTRQVTFSKRRTGLFKKANELSILCGAEIAIVVFSPGNRPYSFGHPGIDVVAAKYLQQEPEPSDSQGNPASDAPNIEKLNLELDEVLAQIREGEKQTETHDEILKQDNVMKLSELKELRDSYKELHDLVKLRLSDMEISECMMLLAQDPVVGIKEKSARKKRRKN