AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene035628

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene035628.t1 MTR_1g008290 75.714 140 31 1 106 245 8 144 8.48e-72 230
MS.gene035628.t1 MTR_6g051425 30.996 271 178 3 55 316 19 289 5.08e-44 162
MS.gene035628.t1 MTR_5g032260 66.667 84 28 0 104 187 323 406 1.39e-31 128
MS.gene035628.t1 MTR_4g035820 30.362 359 218 12 20 360 43 387 4.77e-30 126
MS.gene035628.t1 MTR_4g035820 34.906 106 65 2 418 520 327 431 1.51e-11 68.2
MS.gene035628.t1 MTR_7g446520 30.483 269 167 6 24 291 66 315 9.56e-30 120
MS.gene035628.t1 MTR_1g070355 33.473 239 138 8 58 283 79 309 1.39e-29 124
MS.gene035628.t1 MTR_7g446510 39.634 164 98 1 135 297 166 329 3.57e-29 119
MS.gene035628.t1 MTR_7g446480 40.244 164 97 1 135 297 151 314 7.01e-29 118
MS.gene035628.t1 MTR_5g076070 30.827 266 148 9 25 277 40 282 5.98e-27 111
MS.gene035628.t1 MTR_0402s0040 32.796 186 116 4 47 226 22 204 1.41e-21 99.4
MS.gene035628.t1 MTR_0558s0020 26.459 257 165 5 57 289 40 296 2.78e-19 89.4
MS.gene035628.t1 MTR_8g446020 28.977 176 123 2 116 289 81 256 1.36e-17 83.6
MS.gene035628.t1 MTR_3g450850 27.174 276 171 10 26 277 17 286 3.58e-16 81.3
MS.gene035628.t1 MTR_2g098880 34.906 106 63 1 52 151 60 165 5.93e-16 78.6
MS.gene035628.t1 MTR_2g098880 34.906 106 63 1 52 151 72 177 7.04e-16 78.6
MS.gene035628.t1 MTR_1g013060 29.808 208 135 6 52 249 23 229 2.70e-15 76.3
MS.gene035628.t1 MTR_6g022070 29.310 174 105 4 343 505 1 167 4.08e-15 77.8
MS.gene035628.t1 MTR_3g006370 34.862 109 66 1 48 151 45 153 1.24e-14 74.3
MS.gene035628.t1 MTR_6g090505 26.977 215 131 5 97 288 19 230 7.40e-13 71.2
MS.gene035628.t1 MTR_1g083640 23.684 228 150 5 57 260 55 282 1.10e-11 66.6
MS.gene035628.t1 MTR_4g067290 32.174 115 73 2 42 152 45 158 1.53e-11 65.5
MS.gene035628.t1 MTR_4g067290 32.174 115 73 2 42 152 45 158 1.57e-11 65.5
MS.gene035628.t1 MTR_4g067290 31.624 117 75 2 40 152 63 178 2.00e-11 65.5
MS.gene035628.t1 MTR_4g067290 31.624 117 75 2 40 152 61 176 2.02e-11 65.5
MS.gene035628.t1 MTR_4g067290 31.624 117 75 2 40 152 63 178 2.15e-11 65.5
MS.gene035628.t1 MTR_4g067290 31.624 117 75 2 40 152 103 218 2.88e-11 65.5
MS.gene035628.t1 MTR_5g039760 26.396 197 118 4 52 244 9 182 4.97e-11 62.8
MS.gene035628.t1 MTR_0856s0010 31.897 116 76 2 52 165 33 147 7.66e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene035628.t1 AT4G15090 46.096 666 336 6 20 668 20 679 0.0 644
MS.gene035628.t1 AT4G15090 46.096 666 336 6 20 668 20 679 0.0 644
MS.gene035628.t1 AT4G15090 46.096 666 336 6 20 668 20 679 0.0 644
MS.gene035628.t1 AT4G15090 46.096 666 336 6 20 668 20 679 0.0 644
MS.gene035628.t1 AT4G15090 46.096 666 336 6 20 668 20 679 0.0 644
MS.gene035628.t1 AT3G22170 47.031 640 287 6 52 664 69 683 0.0 616
MS.gene035628.t1 AT3G22170 47.031 640 287 6 52 664 69 683 0.0 616
MS.gene035628.t1 AT1G76320 47.078 616 306 5 57 661 1 607 0.0 595
MS.gene035628.t1 AT1G76320 47.078 616 306 5 57 661 1 607 0.0 595
MS.gene035628.t1 AT1G76320 47.078 616 306 5 57 661 1 607 0.0 594
MS.gene035628.t1 AT1G76320 47.078 616 306 5 57 661 1 607 0.0 594
MS.gene035628.t1 AT2G32250 42.173 626 310 7 56 670 41 625 2.59e-159 479
MS.gene035628.t1 AT2G32250 42.173 626 310 7 56 670 41 625 7.37e-159 479
MS.gene035628.t1 AT2G32250 42.173 626 310 7 56 670 41 625 7.37e-159 479
MS.gene035628.t1 AT2G32250 42.173 626 310 7 56 670 41 625 8.32e-159 479
MS.gene035628.t1 AT2G32250 42.173 626 310 7 56 670 41 625 8.32e-159 479
MS.gene035628.t1 AT2G32250 42.173 626 310 7 56 670 41 625 8.32e-159 479
MS.gene035628.t1 AT2G32250 42.080 625 310 7 57 670 1 584 3.16e-158 476
MS.gene035628.t1 AT2G32250 42.080 625 310 7 57 670 1 584 4.47e-158 476
MS.gene035628.t1 AT4G38180 38.318 642 362 9 52 665 72 707 1.94e-152 462
MS.gene035628.t1 AT4G19990 41.561 628 297 11 56 651 24 613 9.84e-149 451
MS.gene035628.t1 AT4G19990 41.561 628 297 11 56 651 24 613 1.77e-148 451
MS.gene035628.t1 AT4G19990 41.561 628 297 11 56 651 24 613 1.77e-148 451
MS.gene035628.t1 AT4G19990 41.561 628 297 11 56 651 38 627 1.85e-148 451
MS.gene035628.t1 AT4G19990 41.561 628 297 11 56 651 24 613 3.57e-148 451
MS.gene035628.t1 AT4G19990 41.561 628 297 11 56 651 24 613 3.57e-148 451
MS.gene035628.t1 AT4G19990 40.572 594 283 11 90 651 1 556 1.68e-133 410
MS.gene035628.t1 AT1G52520 34.566 622 372 13 53 651 85 694 3.99e-118 370
MS.gene035628.t1 AT2G27110 33.283 658 382 14 21 659 23 642 2.96e-114 364
MS.gene035628.t1 AT2G27110 33.283 658 382 14 21 659 23 642 2.96e-114 364
MS.gene035628.t1 AT1G80010 32.198 646 405 13 34 653 76 714 7.72e-109 347
MS.gene035628.t1 AT2G27110 38.901 455 253 8 222 659 51 497 4.97e-102 328
MS.gene035628.t1 AT3G06250 31.877 618 362 10 52 654 189 762 1.28e-97 318
MS.gene035628.t1 AT3G06250 31.877 618 362 10 52 654 189 762 1.28e-97 318
MS.gene035628.t1 AT3G06250 31.877 618 362 10 52 654 189 762 1.28e-97 318
MS.gene035628.t1 AT5G18960 32.091 617 359 12 52 651 210 783 9.39e-93 306
MS.gene035628.t1 AT5G18960 32.091 617 359 12 52 651 210 783 9.39e-93 306
MS.gene035628.t1 AT4G38170 35.214 443 266 8 226 653 21 457 3.62e-88 287
MS.gene035628.t1 AT1G10240 27.496 651 419 15 45 666 40 666 7.32e-74 252
MS.gene035628.t1 AT1G10240 27.496 651 419 15 45 666 40 666 7.32e-74 252
MS.gene035628.t1 AT5G28530 26.853 607 393 17 26 596 28 619 9.67e-63 222
MS.gene035628.t1 AT5G28530 26.524 607 391 17 26 596 28 615 1.42e-61 219
MS.gene035628.t1 AT5G28530 26.524 607 391 17 26 596 28 615 1.42e-61 219
MS.gene035628.t1 AT5G28530 24.582 598 355 20 26 596 28 556 5.05e-42 162
MS.gene035628.t1 AT5G28530 24.247 598 353 20 26 596 28 552 5.73e-41 159
MS.gene035628.t1 AT4G12850 37.615 109 64 2 43 150 4 109 3.07e-14 70.9
MS.gene035628.t1 AT4G12850 37.273 110 65 2 42 150 3 109 3.41e-14 70.9
MS.gene035628.t1 AT2G43280 32.692 104 65 1 52 150 21 124 6.88e-14 71.6
MS.gene035628.t1 AT4G12850 37.273 110 65 2 42 150 3 109 7.58e-14 70.9
MS.gene035628.t1 AT3G07500 36.036 111 67 1 46 152 26 136 2.14e-13 70.5
MS.gene035628.t1 AT3G59470 33.043 115 72 2 42 152 59 172 6.91e-13 69.7
MS.gene035628.t1 AT3G59470 33.043 115 72 2 42 152 59 172 6.91e-13 69.7
MS.gene035628.t1 AT3G59470 33.043 115 72 2 42 152 71 184 7.62e-13 69.7

Find 116 sgRNAs with CRISPR-Local

Find 264 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGAACAGTTTGAAGTTAAA+TGG 0.134172 8.1:+3146324 MS.gene035628:CDS
CAATATTCGACTTCGGAAAT+AGG 0.173638 8.1:+3146771 MS.gene035628:CDS
TGTCGTTTGTTTGAGTATAA+TGG 0.211600 8.1:+3146845 MS.gene035628:CDS
AAAGAAGATGTGATGGAAAA+TGG 0.230746 8.1:+3145529 MS.gene035628:CDS
GTTGAAATTACAGGATTATC+TGG 0.268533 8.1:+3146701 MS.gene035628:CDS
ATGAAGTTGCTTTGGAAGAT+AGG 0.282489 8.1:+3146555 MS.gene035628:CDS
GAGCTTTATTGATGGTTCTA+TGG 0.285932 8.1:-3145620 None:intergenic
GTCGTTTGTTTGAGTATAAT+GGG 0.305476 8.1:+3146846 MS.gene035628:CDS
AAATATGCTTGCACACGATA+TGG 0.308453 8.1:+3145432 MS.gene035628:CDS
AAGTTCCAAGTTGAAATTAC+AGG 0.311775 8.1:+3146692 MS.gene035628:CDS
ATCTGCTGGTAGCGTGAAAA+AGG 0.314700 8.1:+3147276 MS.gene035628:CDS
CTCATATCCTCCGTGTTGTT+TGG 0.325718 8.1:-3145709 None:intergenic
TGGTCAGTTATCATTGCATT+TGG 0.336053 8.1:-3146134 None:intergenic
ATTTCAACTATCAGACTTAG+AGG 0.337863 8.1:+3146364 MS.gene035628:CDS
AAGAAATAATGAAGATTTCA+TGG 0.354447 8.1:+3146265 MS.gene035628:CDS
AATATTCGACTTCGGAAATA+GGG 0.355503 8.1:+3146772 MS.gene035628:CDS
AGAGATGATTATCAAGTGTT+TGG 0.360410 8.1:+3145927 MS.gene035628:CDS
CGTCGTTTGAATTTAGAATC+TGG 0.368832 8.1:+3145780 MS.gene035628:CDS
ATGCCATTTGCTCCATTCAT+TGG 0.368836 8.1:+3145996 MS.gene035628:CDS
ATCATATGTTGGCGATTTAG+AGG 0.376175 8.1:+3145257 MS.gene035628:CDS
CAACAAAGATACCACTATAT+TGG 0.377597 8.1:-3146898 None:intergenic
ATATGAGAAAGTTGGTTGCT+TGG 0.385751 8.1:+3145725 MS.gene035628:CDS
TGAAGTTAAATGGGCAGAAA+TGG 0.387239 8.1:+3146334 MS.gene035628:CDS
ATTACATGACCAAGCTTCTC+AGG 0.400641 8.1:-3146242 None:intergenic
TGAAGATATTTGTTCGAAGA+AGG 0.400896 8.1:+3146991 MS.gene035628:CDS
ATTCTGCTGAGCTTTATTGA+TGG 0.407897 8.1:-3145628 None:intergenic
TATGCTAAAAGTGTCGGATT+TGG 0.411257 8.1:+3145354 MS.gene035628:CDS
CCACTTTCATTGATCTGTCT+TGG 0.414732 8.1:-3146154 None:intergenic
AGAACAGTTTGAAGTTAAAT+GGG 0.416062 8.1:+3146325 MS.gene035628:CDS
GGGAAGAATTTGTTGTAGAG+TGG 0.416912 8.1:+3146792 MS.gene035628:CDS
GGAAAATAATGTGCATATGT+TGG 0.418435 8.1:-3145594 None:intergenic
ATTGACATTTGCTTCTCAAA+AGG 0.424118 8.1:-3146644 None:intergenic
GAAAATAATGTGCATATGTT+GGG 0.428333 8.1:-3145593 None:intergenic
CCTCAAGTTTCGAAAACAAA+AGG 0.429689 8.1:+3147205 MS.gene035628:CDS
AATGTTCAACAACCTTCTCT+TGG 0.431668 8.1:+3145285 MS.gene035628:CDS
TCTTTGGCATATACTTAGAA+AGG 0.437001 8.1:+3146217 MS.gene035628:CDS
AACATATGATTCATTATTGA+CGG 0.441243 8.1:-3145244 None:intergenic
GTTGATGAAAACATGGCTTA+AGG 0.445350 8.1:+3146094 MS.gene035628:CDS
CTTTCTCTGATAGAGATTGT+TGG 0.446604 8.1:-3143457 None:intergenic
TGTTAGAAATTATTTAGATA+AGG 0.447109 8.1:+3145755 MS.gene035628:CDS
AAGGAATGCACATTGTTTCA+AGG 0.460676 8.1:-3147113 None:intergenic
TCAGTTATCATTGCATTTGG+AGG 0.462799 8.1:-3146131 None:intergenic
CTGGATGTCATCTCAGGAAA+AGG 0.462827 8.1:+3146720 MS.gene035628:CDS
CACACTACATATTGAAAAGA+TGG 0.466243 8.1:+3146927 MS.gene035628:CDS
TCTTTGTAGACATTCGTTGA+TGG 0.469919 8.1:+3146871 MS.gene035628:CDS
TCCGAAGGTCTCTCAATTGT+TGG 0.470732 8.1:+3147033 MS.gene035628:CDS
TGAAGTTGCTTTGGAAGATA+GGG 0.473723 8.1:+3146556 MS.gene035628:CDS
GATTATCTGGATGTCATCTC+AGG 0.476572 8.1:+3146714 MS.gene035628:CDS
TCAAATTTCATTCCAAGAGA+AGG 0.478538 8.1:-3145297 None:intergenic
AATATGCTTGCACACGATAT+GGG 0.482142 8.1:+3145433 MS.gene035628:CDS
ACACCAATGAATGGAGCAAA+TGG 0.483780 8.1:-3145999 None:intergenic
GCATTTGATTTGGATGATGA+TGG 0.483998 8.1:+3145867 MS.gene035628:CDS
GGAAGAATTTGTTGTAGAGT+GGG 0.484851 8.1:+3146793 MS.gene035628:CDS
CACTTCCAGTCAAGATTACT+CGG 0.485082 8.1:+3146029 MS.gene035628:CDS
CTCAAGTTTCGAAAACAAAA+GGG 0.491800 8.1:+3147206 MS.gene035628:CDS
AAGAAGATGTGATGGAAAAT+GGG 0.500802 8.1:+3145530 MS.gene035628:CDS
TAACTTTGCATGTCATGCAC+TGG 0.501914 8.1:+3147084 MS.gene035628:CDS
GTCAATAATGAATCATATGT+TGG 0.504520 8.1:+3145246 MS.gene035628:CDS
CAACTATCAGACTTAGAGGA+TGG 0.506062 8.1:+3146368 MS.gene035628:CDS
TGATTATTCACACCAATGAA+TGG 0.509004 8.1:-3146008 None:intergenic
TTGAAGGTGGAATGTGAGGC+TGG 0.510501 8.1:+3145495 MS.gene035628:CDS
GAAGTCGAATATTGTAAAAG+AGG 0.515666 8.1:-3146762 None:intergenic
TCCAACAATTGAGAGACCTT+CGG 0.516719 8.1:-3147034 None:intergenic
TGCATGTCATGCACTGGAAG+AGG 0.518010 8.1:+3147090 MS.gene035628:CDS
TGGAGATGCAAATGCAATGC+TGG 0.521188 8.1:+3145800 MS.gene035628:CDS
AAATCCACGTCCTTGTTTGA+AGG 0.523815 8.1:+3145479 MS.gene035628:CDS
GAAAAGTCGCTACAAAGGTT+CGG 0.523920 8.1:-3143480 None:intergenic
TTGATGGCCCTCCAATATAG+TGG 0.527572 8.1:+3146887 MS.gene035628:CDS
AAAATAGCCCAGAAAATAGC+AGG 0.528595 8.1:+3147149 MS.gene035628:CDS
CATATTAAAAGAAGATGTGA+TGG 0.530592 8.1:+3145522 MS.gene035628:CDS
TGTGATATATGTAGTATCAA+AGG 0.535912 8.1:-3145961 None:intergenic
AGACCTCTGAGACTTTCAAA+TGG 0.536664 8.1:+3146072 MS.gene035628:CDS
ATTTGCTTCTCAAAAGGTGA+TGG 0.540522 8.1:-3146638 None:intergenic
TTATTGATGGTTCTATGGCA+AGG 0.541208 8.1:-3145615 None:intergenic
AGAAATAATGAAGATTTCAT+GGG 0.542942 8.1:+3146266 MS.gene035628:CDS
AAAACATGGCTTAAGGCAAT+GGG 0.547926 8.1:+3146101 MS.gene035628:CDS
AGAAAGGTGCCTGAGAAGCT+TGG 0.548920 8.1:+3146233 MS.gene035628:CDS
CACAACCGAGTAATCTTGAC+TGG 0.549591 8.1:-3146034 None:intergenic
CAAAGATACCACTATATTGG+AGG 0.552530 8.1:-3146895 None:intergenic
ATAAAGAGCGGCATTGAAAG+AGG 0.555157 8.1:+3147241 MS.gene035628:CDS
GTTCAATATGCTAAAAGTGT+CGG 0.555277 8.1:+3145348 MS.gene035628:CDS
TCCACGTCCTTGTTTGAAGG+TGG 0.557108 8.1:+3145482 MS.gene035628:CDS
GTCTCTCAATTGTTGGAGGA+AGG 0.560354 8.1:+3147040 MS.gene035628:CDS
GAAAACATGGCTTAAGGCAA+TGG 0.563989 8.1:+3146100 MS.gene035628:CDS
GAAGGTCTCTCAATTGTTGG+AGG 0.564988 8.1:+3147036 MS.gene035628:CDS
TCAAATGGTTGATGAAAACA+TGG 0.566329 8.1:+3146087 MS.gene035628:CDS
CCAAGACAGATCAATGAAAG+TGG 0.568572 8.1:+3146154 MS.gene035628:CDS
CACGGAGGATATGAGAAAGT+TGG 0.568866 8.1:+3145717 MS.gene035628:CDS
AACTATCAGACTTAGAGGAT+GGG 0.570196 8.1:+3146369 MS.gene035628:CDS
ATTGAAACTTTGCAACATGT+TGG 0.575416 8.1:+3145654 MS.gene035628:CDS
ATAATCCTGTAATTTCAACT+TGG 0.576948 8.1:-3146697 None:intergenic
TTGTTTGAAGGTGGAATGTG+AGG 0.578909 8.1:+3145491 MS.gene035628:CDS
TCCACCTTCAAACAAGGACG+TGG 0.585275 8.1:-3145483 None:intergenic
AATGAAAGTGGCTATTGAAG+AGG 0.589622 8.1:+3146166 MS.gene035628:CDS
GGTCGAAAGAGAACATCTGC+TGG 0.591877 8.1:+3147262 MS.gene035628:CDS
TCACATTCCACCTTCAAACA+AGG 0.594495 8.1:-3145489 None:intergenic
ATATGATCGTTTGTATCCGA+AGG 0.601625 8.1:+3147018 MS.gene035628:CDS
TGTGATCTTTGATGAAGCCA+TGG 0.603124 8.1:-3145557 None:intergenic
AGAGTGGGATGCATCGAAAG+AGG 0.609307 8.1:+3146808 MS.gene035628:CDS
TATCAGACTTAGAGGATGGG+TGG 0.609558 8.1:+3146372 MS.gene035628:CDS
AAAGATACCACTATATTGGA+GGG 0.609693 8.1:-3146894 None:intergenic
ACATGGCTTAAGGCAATGGG+TGG 0.614242 8.1:+3146104 MS.gene035628:CDS
TCCGTGTTGTTTGGCCATTG+TGG 0.622234 8.1:-3145700 None:intergenic
TACCGGAAAAGTCGCTACAA+AGG 0.622622 8.1:-3143485 None:intergenic
AAGCAAAATTTATGCCACAA+TGG 0.623748 8.1:+3145686 MS.gene035628:CDS
CATATTGAAAAGATGGACAA+AGG 0.638198 8.1:+3146934 MS.gene035628:CDS
GCCACAATGGCCAAACAACA+CGG 0.643363 8.1:+3145699 MS.gene035628:CDS
GATGGAAAATGGGTGGTCCA+TGG 0.647834 8.1:+3145540 MS.gene035628:CDS
GGACAAAGGATATCAGAAGT+CGG 0.650140 8.1:+3146948 MS.gene035628:CDS
CATGGCTTAAGGCAATGGGT+GGG 0.661221 8.1:+3146105 MS.gene035628:CDS
TCAAGTTTCGAAAACAAAAG+GGG 0.665593 8.1:+3147207 MS.gene035628:CDS
CAACCATTTGAAAGTCTCAG+AGG 0.666951 8.1:-3146075 None:intergenic
CAGATTCTAAATTCAAACGA+CGG 0.687984 8.1:-3145779 None:intergenic
GCACCGAAAAGAATAAAGAG+CGG 0.711864 8.1:+3147229 MS.gene035628:CDS
AAGATGTGATGGAAAATGGG+TGG 0.757314 8.1:+3145533 MS.gene035628:CDS
ACAATGGCCAAACAACACGG+AGG 0.791386 8.1:+3145702 MS.gene035628:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTATTTATAAAAATAAA+AGG + chr8.1:3144455-3144474 MS.gene035628:intron 0.0%
!! TATTTATAAAAATAAAAGGT+GGG + chr8.1:3144459-3144478 MS.gene035628:intron 10.0%
!! TTATTTATAAAAATAAAAGG+TGG + chr8.1:3144458-3144477 MS.gene035628:intron 10.0%
!!! GATTCTATTTTTTTTTTTTA+AGG - chr8.1:3144394-3144413 None:intergenic 10.0%
!! TGGTAAAGAAAAAAAAATTA+GGG + chr8.1:3144299-3144318 MS.gene035628:intron 15.0%
!! TGTTAGAAATTATTTAGATA+AGG + chr8.1:3145755-3145774 MS.gene035628:CDS 15.0%
!!! ATACATATTTTAGGAATTAA+TGG + chr8.1:3145182-3145201 MS.gene035628:intron 15.0%
!!! TAATTTATTCTTTCTTCTTT+TGG - chr8.1:3144441-3144460 None:intergenic 15.0%
!! AAAAAAAAATTAGGGCAATT+AGG + chr8.1:3144307-3144326 MS.gene035628:intron 20.0%
!! AACATATGATTCATTATTGA+CGG - chr8.1:3145247-3145266 None:intergenic 20.0%
!! AAGAAATAATGAAGATTTCA+TGG + chr8.1:3146265-3146284 MS.gene035628:CDS 20.0%
!! AGAAATAATGAAGATTTCAT+GGG + chr8.1:3146266-3146285 MS.gene035628:CDS 20.0%
!! ATATATATATAATGACACCA+AGG - chr8.1:3144583-3144602 None:intergenic 20.0%
!! ATTCTACATGTTTATTCTTA+GGG - chr8.1:3144371-3144390 None:intergenic 20.0%
!! CTGGTAAAGAAAAAAAAATT+AGG + chr8.1:3144298-3144317 MS.gene035628:intron 20.0%
!! TTAGATTAAAACCGTATTAA+TGG + chr8.1:3144527-3144546 MS.gene035628:intron 20.0%
!!! AAATAGAATCAGAGAATTTT+TGG + chr8.1:3144404-3144423 MS.gene035628:intron 20.0%
!!! ACAATTAAATGTGTTGATTT+TGG - chr8.1:3144787-3144806 None:intergenic 20.0%
!!! ACGATTTGAATACATATTTT+AGG + chr8.1:3145173-3145192 MS.gene035628:intron 20.0%
!!! ACTTTTCTTCTTAAAAAAAG+TGG + chr8.1:3144177-3144196 MS.gene035628:intron 20.0%
!!! ATTCTCTAGAAATTTTTGAA+CGG - chr8.1:3145401-3145420 None:intergenic 20.0%
!!! ATTCTTTTATGCATTTGATT+TGG + chr8.1:3145857-3145876 MS.gene035628:CDS 20.0%
!!! TAAGAGTATTTCACTTTTTA+AGG + chr8.1:3145011-3145030 MS.gene035628:intron 20.0%
!!! TACATGAAAGATACTTTTTT+CGG + chr8.1:3146437-3146456 MS.gene035628:intron 20.0%
!!! TCGTGTAAAAAATGTATTTT+GGG + chr8.1:3145890-3145909 MS.gene035628:CDS 20.0%
!!! TCTTTTTTTGACAAATATGT+AGG + chr8.1:3146497-3146516 MS.gene035628:CDS 20.0%
!!! TTAATACGGTTTTAATCTAA+CGG - chr8.1:3144527-3144546 None:intergenic 20.0%
! AAATGTAATGATAGTCCATT+TGG + chr8.1:3143627-3143646 MS.gene035628:intron 25.0%
! AAATTCATGTTGAACAAACA+GGG - chr8.1:3145075-3145094 None:intergenic 25.0%
! AATGTAATGATAGTCCATTT+GGG + chr8.1:3143628-3143647 MS.gene035628:intron 25.0%
! ATAATCCTGTAATTTCAACT+TGG - chr8.1:3146700-3146719 None:intergenic 25.0%
! ATATGAAGAACGTTAACATT+GGG + chr8.1:3146406-3146425 MS.gene035628:intron 25.0%
! ATATTTGTTTGCTCTAATGT+TGG - chr8.1:3143779-3143798 None:intergenic 25.0%
! CATATTAAAAGAAGATGTGA+TGG + chr8.1:3145522-3145541 MS.gene035628:CDS 25.0%
! GAAAATAATGTGCATATGTT+GGG - chr8.1:3145596-3145615 None:intergenic 25.0%
! GATTCTACATGTTTATTCTT+AGG - chr8.1:3144372-3144391 None:intergenic 25.0%
! GTCAATAATGAATCATATGT+TGG + chr8.1:3145246-3145265 MS.gene035628:CDS 25.0%
! TAGTTTCAAAAGCAAAAATG+AGG - chr8.1:3143654-3143673 None:intergenic 25.0%
! TATATGAAGAACGTTAACAT+TGG + chr8.1:3146405-3146424 MS.gene035628:intron 25.0%
! TCAAATTCCATATCAATACA+AGG + chr8.1:3143890-3143909 MS.gene035628:intron 25.0%
! TGAAAAATATGAAGTTGCTT+TGG + chr8.1:3146547-3146566 MS.gene035628:CDS 25.0%
! TGAGTACTTAATGAGTTTAT+GGG + chr8.1:3144499-3144518 MS.gene035628:intron 25.0%
! TGTGATATATGTAGTATCAA+AGG - chr8.1:3145964-3145983 None:intergenic 25.0%
!! AAAGTATCTTTCATGTAAAC+AGG - chr8.1:3146434-3146453 None:intergenic 25.0%
!! AAATACTCTTACTCTTTTGT+TGG - chr8.1:3145002-3145021 None:intergenic 25.0%
!! ACATCATTTGCTAAAAAAGA+AGG - chr8.1:3143842-3143861 None:intergenic 25.0%
!! AGAACAGTTTGAAGTTAAAT+GGG + chr8.1:3146325-3146344 MS.gene035628:CDS 25.0%
!! ATGTTCTTCATTTTCATCAA+TGG - chr8.1:3145211-3145230 None:intergenic 25.0%
!! GTCGTGTAAAAAATGTATTT+TGG + chr8.1:3145889-3145908 MS.gene035628:CDS 25.0%
!! TAGAACAGTTTGAAGTTAAA+TGG + chr8.1:3146324-3146343 MS.gene035628:CDS 25.0%
!! TATTGATCCTTGTATTGATA+TGG - chr8.1:3143900-3143919 None:intergenic 25.0%
!! TCTTTTACAATATTCGACTT+CGG + chr8.1:3146764-3146783 MS.gene035628:CDS 25.0%
!! TGTTCTTCATTTTCATCAAT+GGG - chr8.1:3145210-3145229 None:intergenic 25.0%
!! TTTGCTAAAAAAGAAGGTTT+TGG - chr8.1:3143836-3143855 None:intergenic 25.0%
!! TTTTCAATATGTAGTGTGAT+GGG - chr8.1:3146925-3146944 None:intergenic 25.0%
!!! AATCAGAGAATTTTTGGAAA+GGG + chr8.1:3144410-3144429 MS.gene035628:intron 25.0%
!!! ATTTTCTGGGCTATTTTTTA+AGG - chr8.1:3147146-3147165 None:intergenic 25.0%
!!! TATTCTTTTAACTTCTGACT+TGG + chr8.1:3144750-3144769 MS.gene035628:intron 25.0%
!!! TATTTTTTAAGGATCGGTTA+AGG - chr8.1:3147135-3147154 None:intergenic 25.0%
!!! TCAAATTTAATTTGACACCT+TGG + chr8.1:3144563-3144582 MS.gene035628:intron 25.0%
!!! TGTAAAAAATGTATTTTGGG+TGG + chr8.1:3145893-3145912 MS.gene035628:CDS 25.0%
AAAGATACCACTATATTGGA+GGG - chr8.1:3146897-3146916 None:intergenic 30.0%
AACATCAAGAACTGATTGTA+AGG - chr8.1:3143686-3143705 None:intergenic 30.0%
AAGCAAAATTTATGCCACAA+TGG + chr8.1:3145686-3145705 MS.gene035628:CDS 30.0%
AATATTCGACTTCGGAAATA+GGG + chr8.1:3146772-3146791 MS.gene035628:CDS 30.0%
AATTCATGTTGAACAAACAG+GGG - chr8.1:3145074-3145093 None:intergenic 30.0%
AGAGATGATTATCAAGTGTT+TGG + chr8.1:3145927-3145946 MS.gene035628:CDS 30.0%
ATAAGGAAAGAGGAATTCTT+AGG - chr8.1:3144858-3144877 None:intergenic 30.0%
ATTGAAACTTTGCAACATGT+TGG + chr8.1:3145654-3145673 MS.gene035628:CDS 30.0%
ATTGACATTTGCTTCTCAAA+AGG - chr8.1:3146647-3146666 None:intergenic 30.0%
ATTTCAACTATCAGACTTAG+AGG + chr8.1:3146364-3146383 MS.gene035628:CDS 30.0%
CAAATTCATGTTGAACAAAC+AGG - chr8.1:3145076-3145095 None:intergenic 30.0%
CAACAAAGATACCACTATAT+TGG - chr8.1:3146901-3146920 None:intergenic 30.0%
CAATACTCATAATCATGCAA+TGG - chr8.1:3143605-3143624 None:intergenic 30.0%
CACACTACATATTGAAAAGA+TGG + chr8.1:3146927-3146946 MS.gene035628:CDS 30.0%
CAGATTCTAAATTCAAACGA+CGG - chr8.1:3145782-3145801 None:intergenic 30.0%
CATATTGAAAAGATGGACAA+AGG + chr8.1:3146934-3146953 MS.gene035628:CDS 30.0%
CATGTTATGACTATCTTCTT+CGG + chr8.1:3144123-3144142 MS.gene035628:intron 30.0%
CTAGGATAGTTTATACTCTT+GGG + chr8.1:3143574-3143593 MS.gene035628:intron 30.0%
CTCAAGTTTCGAAAACAAAA+GGG + chr8.1:3147206-3147225 MS.gene035628:CDS 30.0%
CTGTTTGTTCAACATGAATT+TGG + chr8.1:3145074-3145093 MS.gene035628:intron 30.0%
GAAGAAAAGTCACATAACAA+TGG - chr8.1:3144167-3144186 None:intergenic 30.0%
GAAGTCGAATATTGTAAAAG+AGG - chr8.1:3146765-3146784 None:intergenic 30.0%
GCAATACAATCACAGTAAAA+AGG - chr8.1:3143724-3143743 None:intergenic 30.0%
GGAAAATAATGTGCATATGT+TGG - chr8.1:3145597-3145616 None:intergenic 30.0%
GTCGTTTGTTTGAGTATAAT+GGG + chr8.1:3146846-3146865 MS.gene035628:CDS 30.0%
GTGAGTACTTAATGAGTTTA+TGG + chr8.1:3144498-3144517 MS.gene035628:intron 30.0%
GTTAAAAGAATAGTATGACG+TGG - chr8.1:3144742-3144761 None:intergenic 30.0%
GTTGAAATTACAGGATTATC+TGG + chr8.1:3146701-3146720 MS.gene035628:CDS 30.0%
TAGGATAGTTTATACTCTTG+GGG + chr8.1:3143575-3143594 MS.gene035628:intron 30.0%
TCAAATCCTAGCCATTAATA+CGG - chr8.1:3144541-3144560 None:intergenic 30.0%
TCAAATTTCATTCCAAGAGA+AGG - chr8.1:3145300-3145319 None:intergenic 30.0%
TCAAGTTTCGAAAACAAAAG+GGG + chr8.1:3147207-3147226 MS.gene035628:CDS 30.0%
TCTTCTTAAAAAAAGTGGCA+TGG + chr8.1:3144182-3144201 MS.gene035628:intron 30.0%
TCTTTGGCATATACTTAGAA+AGG + chr8.1:3146217-3146236 MS.gene035628:CDS 30.0%
TGAAGATATTTGTTCGAAGA+AGG + chr8.1:3146991-3147010 MS.gene035628:CDS 30.0%
TGATTATTCACACCAATGAA+TGG - chr8.1:3146011-3146030 None:intergenic 30.0%
TGTCATTACTATCAACATGT+TGG + chr8.1:3143753-3143772 MS.gene035628:intron 30.0%
TTAAAACCGTATTAATGGCT+AGG + chr8.1:3144532-3144551 MS.gene035628:intron 30.0%
! AAAGAAGATGTGATGGAAAA+TGG + chr8.1:3145529-3145548 MS.gene035628:CDS 30.0%
! AAATTAGGGCAATTAGGTTT+TGG + chr8.1:3144313-3144332 MS.gene035628:intron 30.0%
! AAGAAGATGTGATGGAAAAT+GGG + chr8.1:3145530-3145549 MS.gene035628:CDS 30.0%
! AAGTTCCAAGTTGAAATTAC+AGG + chr8.1:3146692-3146711 MS.gene035628:CDS 30.0%
! CTTTTCAATATGTAGTGTGA+TGG - chr8.1:3146926-3146945 None:intergenic 30.0%
! GTTCAATATGCTAAAAGTGT+CGG + chr8.1:3145348-3145367 MS.gene035628:CDS 30.0%
! TGTCGTTTGTTTGAGTATAA+TGG + chr8.1:3146845-3146864 MS.gene035628:CDS 30.0%
!! AAAAATGTATTTTGGGTGGA+TGG + chr8.1:3145897-3145916 MS.gene035628:CDS 30.0%
!! GAATCAGAGAATTTTTGGAA+AGG + chr8.1:3144409-3144428 MS.gene035628:intron 30.0%
!! TCAAATGGTTGATGAAAACA+TGG + chr8.1:3146087-3146106 MS.gene035628:CDS 30.0%
!!! ATGAAAGATACTTTTTTCGG+TGG + chr8.1:3146440-3146459 MS.gene035628:intron 30.0%
!!! ATTAGGTTTTGGAGTGAAAT+AGG + chr8.1:3144324-3144343 MS.gene035628:intron 30.0%
!!! TGCATGCTGATTTTAATACA+TGG + chr8.1:3146591-3146610 MS.gene035628:CDS 30.0%
!!! TTAGGTTTTGGAGTGAAATA+GGG + chr8.1:3144325-3144344 MS.gene035628:intron 30.0%
AAAACATGGCTTAAGGCAAT+GGG + chr8.1:3146101-3146120 MS.gene035628:CDS 35.0%
AAAATAGCCCAGAAAATAGC+AGG + chr8.1:3147149-3147168 MS.gene035628:CDS 35.0%
AAATATGCTTGCACACGATA+TGG + chr8.1:3145432-3145451 MS.gene035628:CDS 35.0%
AACTATCAGACTTAGAGGAT+GGG + chr8.1:3146369-3146388 MS.gene035628:CDS 35.0%
AAGATAGAGTCAACTGGTAT+AGG + chr8.1:3144219-3144238 MS.gene035628:intron 35.0%
AAGGAATGCACATTGTTTCA+AGG - chr8.1:3147116-3147135 None:intergenic 35.0%
AATATGCTTGCACACGATAT+GGG + chr8.1:3145433-3145452 MS.gene035628:CDS 35.0%
AATGAAAGTGGCTATTGAAG+AGG + chr8.1:3146166-3146185 MS.gene035628:CDS 35.0%
AATGTTCAACAACCTTCTCT+TGG + chr8.1:3145285-3145304 MS.gene035628:CDS 35.0%
AGAAGATAGTCATAACATGG+AGG - chr8.1:3144122-3144141 None:intergenic 35.0%
AGTTGAACAGTTTGATCAAG+AGG - chr8.1:3143518-3143537 None:intergenic 35.0%
ATATGATCGTTTGTATCCGA+AGG + chr8.1:3147018-3147037 MS.gene035628:CDS 35.0%
ATCATATGTTGGCGATTTAG+AGG + chr8.1:3145257-3145276 MS.gene035628:CDS 35.0%
ATTTGCTTCTCAAAAGGTGA+TGG - chr8.1:3146641-3146660 None:intergenic 35.0%
CAAAGATACCACTATATTGG+AGG - chr8.1:3146898-3146917 None:intergenic 35.0%
CAATATTCGACTTCGGAAAT+AGG + chr8.1:3146771-3146790 MS.gene035628:CDS 35.0%
CCTAGGATAGTTTATACTCT+TGG + chr8.1:3143573-3143592 MS.gene035628:intron 35.0%
CCTCAAGTTTCGAAAACAAA+AGG + chr8.1:3147205-3147224 MS.gene035628:CDS 35.0%
CGAAGAAGATAGTCATAACA+TGG - chr8.1:3144125-3144144 None:intergenic 35.0%
CTTTCTCTGATAGAGATTGT+TGG - chr8.1:3143460-3143479 None:intergenic 35.0%
GGAAGTGAAGCATAAAATAC+TGG + chr8.1:3144279-3144298 MS.gene035628:intron 35.0%
GTTGAACAGTTTGATCAAGA+GGG - chr8.1:3143517-3143536 None:intergenic 35.0%
TAAAAAAAGTGGCATGGAAG+TGG + chr8.1:3144188-3144207 MS.gene035628:intron 35.0%
TATAGAGTAATGCTAGCATC+AGG + chr8.1:3144676-3144695 MS.gene035628:intron 35.0%
TCAGTTATCATTGCATTTGG+AGG - chr8.1:3146134-3146153 None:intergenic 35.0%
TCTTTGTAGACATTCGTTGA+TGG + chr8.1:3146871-3146890 MS.gene035628:CDS 35.0%
TGAAGTTAAATGGGCAGAAA+TGG + chr8.1:3146334-3146353 MS.gene035628:CDS 35.0%
TGGTCAGTTATCATTGCATT+TGG - chr8.1:3146137-3146156 None:intergenic 35.0%
! ATATGAGAAAGTTGGTTGCT+TGG + chr8.1:3145725-3145744 MS.gene035628:CDS 35.0%
! ATGCCGCTCTTTATTCTTTT+CGG - chr8.1:3147235-3147254 None:intergenic 35.0%
! CCAAGAGTATAAACTATCCT+AGG - chr8.1:3143576-3143595 None:intergenic 35.0%
! CCTAGGTGCCATAAAAAAAT+GGG - chr8.1:3143559-3143578 None:intergenic 35.0%
! CGTCGTTTGAATTTAGAATC+TGG + chr8.1:3145780-3145799 MS.gene035628:CDS 35.0%
! GTTGATGAAAACATGGCTTA+AGG + chr8.1:3146094-3146113 MS.gene035628:CDS 35.0%
! TCCTAGGTGCCATAAAAAAA+TGG - chr8.1:3143560-3143579 None:intergenic 35.0%
! TTATTGATGGTTCTATGGCA+AGG - chr8.1:3145618-3145637 None:intergenic 35.0%
!! ATGAAGTTGCTTTGGAAGAT+AGG + chr8.1:3146555-3146574 MS.gene035628:CDS 35.0%
!! ATTCTGCTGAGCTTTATTGA+TGG - chr8.1:3145631-3145650 None:intergenic 35.0%
!! GAGCTTTATTGATGGTTCTA+TGG - chr8.1:3145623-3145642 None:intergenic 35.0%
!! GCATTTGATTTGGATGATGA+TGG + chr8.1:3145867-3145886 MS.gene035628:CDS 35.0%
!! GGAAGAATTTGTTGTAGAGT+GGG + chr8.1:3146793-3146812 MS.gene035628:CDS 35.0%
!! TATGCTAAAAGTGTCGGATT+TGG + chr8.1:3145354-3145373 MS.gene035628:CDS 35.0%
!! TCTTCTTCGGCATTTGATTT+TGG + chr8.1:3144136-3144155 MS.gene035628:intron 35.0%
!! TGAAGTTGCTTTGGAAGATA+GGG + chr8.1:3146556-3146575 MS.gene035628:CDS 35.0%
!! TTAACTTCTGACTTGGTTAC+CGG + chr8.1:3144757-3144776 MS.gene035628:intron 35.0%
!!! ATGTGTTGATTTTGGTGAAC+CGG - chr8.1:3144779-3144798 None:intergenic 35.0%
!!! CAAAAGGTGATGGAGTTTTA+AGG - chr8.1:3146631-3146650 None:intergenic 35.0%
!!! CCTTTTGTTTTCGAAACTTG+AGG - chr8.1:3147208-3147227 None:intergenic 35.0%
!!! CTGGGCTATTTTTTAAGGAT+CGG - chr8.1:3147141-3147160 None:intergenic 35.0%
!!! TAGGTTTTGGAGTGAAATAG+GGG + chr8.1:3144326-3144345 MS.gene035628:intron 35.0%
AAACAGCGATGTGTGAGATA+AGG - chr8.1:3144875-3144894 None:intergenic 40.0%
AAGCAAAAATGAGGCCCAAA+TGG - chr8.1:3143645-3143664 None:intergenic 40.0%
ACACCAATGAATGGAGCAAA+TGG - chr8.1:3146002-3146021 None:intergenic 40.0%
ATTACATGACCAAGCTTCTC+AGG - chr8.1:3146245-3146264 None:intergenic 40.0%
CAAAAACGATGTCGGGTATT+TGG - chr8.1:3146197-3146216 None:intergenic 40.0%
CAACCATTTGAAAGTCTCAG+AGG - chr8.1:3146078-3146097 None:intergenic 40.0%
CAACTATCAGACTTAGAGGA+TGG + chr8.1:3146368-3146387 MS.gene035628:CDS 40.0%
CACTTCCAGTCAAGATTACT+CGG + chr8.1:3146029-3146048 MS.gene035628:CDS 40.0%
CCAAAGACAAAAACGATGTC+GGG - chr8.1:3146204-3146223 None:intergenic 40.0%
CCAAGACAGATCAATGAAAG+TGG + chr8.1:3146154-3146173 MS.gene035628:CDS 40.0%
CCACTTTCATTGATCTGTCT+TGG - chr8.1:3146157-3146176 None:intergenic 40.0%
GAAAACATGGCTTAAGGCAA+TGG + chr8.1:3146100-3146119 MS.gene035628:CDS 40.0%
GAAAAGTCGCTACAAAGGTT+CGG - chr8.1:3143483-3143502 None:intergenic 40.0%
GAACATCTAAGTCATGCTCA+GGG + chr8.1:3143933-3143952 MS.gene035628:intron 40.0%
GATGTGTGAGATAAGGAAAG+AGG - chr8.1:3144868-3144887 None:intergenic 40.0%
GATTATCTGGATGTCATCTC+AGG + chr8.1:3146714-3146733 MS.gene035628:CDS 40.0%
GCACCGAAAAGAATAAAGAG+CGG + chr8.1:3147229-3147248 MS.gene035628:CDS 40.0%
GCCAAAGACAAAAACGATGT+CGG - chr8.1:3146205-3146224 None:intergenic 40.0%
GGACAAAGGATATCAGAAGT+CGG + chr8.1:3146948-3146967 MS.gene035628:CDS 40.0%
GGACTTTCTGCATGAAACAA+AGG - chr8.1:3144924-3144943 None:intergenic 40.0%
GTCAACTGGTATAGGAAAAG+AGG + chr8.1:3144227-3144246 MS.gene035628:intron 40.0%
GTGCCATAAAAAAATGGGTG+GGG - chr8.1:3143554-3143573 None:intergenic 40.0%
TAACTTTGCATGTCATGCAC+TGG + chr8.1:3147084-3147103 MS.gene035628:CDS 40.0%
TCACATTCCACCTTCAAACA+AGG - chr8.1:3145492-3145511 None:intergenic 40.0%
TCATAACATGGAGGACATAG+AGG - chr8.1:3144113-3144132 None:intergenic 40.0%
TCCAACAATTGAGAGACCTT+CGG - chr8.1:3147037-3147056 None:intergenic 40.0%
TGAACATCTAAGTCATGCTC+AGG + chr8.1:3143932-3143951 MS.gene035628:intron 40.0%
TGCATGAAACAAAGGCTGAA+TGG - chr8.1:3144916-3144935 None:intergenic 40.0%
TGTGATCTTTGATGAAGCCA+TGG - chr8.1:3145560-3145579 None:intergenic 40.0%
TTATGCACTCCCTCATTTAG+TGG + chr8.1:3144715-3144734 MS.gene035628:intron 40.0%
TTGTTTGAAGGTGGAATGTG+AGG + chr8.1:3145491-3145510 MS.gene035628:CDS 40.0%
! AAATCCACGTCCTTGTTTGA+AGG + chr8.1:3145479-3145498 MS.gene035628:CDS 40.0%
! AACCTTTGTAGCGACTTTTC+CGG + chr8.1:3143483-3143502 MS.gene035628:CDS 40.0%
! AAGATGTGATGGAAAATGGG+TGG + chr8.1:3145533-3145552 MS.gene035628:CDS 40.0%
! AGGTGCCATAAAAAAATGGG+TGG - chr8.1:3143556-3143575 None:intergenic 40.0%
! AGTGGTGGTGTTTATCCTTT+GGG - chr8.1:3144946-3144965 None:intergenic 40.0%
! AGTTGTGATGGTGAATAGCT+TGG + chr8.1:3144257-3144276 MS.gene035628:intron 40.0%
! ATAAAGAGCGGCATTGAAAG+AGG + chr8.1:3147241-3147260 MS.gene035628:CDS 40.0%
! ATGCCATTTGCTCCATTCAT+TGG + chr8.1:3145996-3146015 MS.gene035628:CDS 40.0%
! GGTGCCATAAAAAAATGGGT+GGG - chr8.1:3143555-3143574 None:intergenic 40.0%
! GTTGTGATGGTGAATAGCTT+GGG + chr8.1:3144258-3144277 MS.gene035628:intron 40.0%
!! AGACCTCTGAGACTTTCAAA+TGG + chr8.1:3146072-3146091 MS.gene035628:CDS 40.0%
!! GGGAAGAATTTGTTGTAGAG+TGG + chr8.1:3146792-3146811 MS.gene035628:CDS 40.0%
!! GTATTTTGGGTGGATGGAAA+GGG + chr8.1:3145903-3145922 MS.gene035628:CDS 40.0%
!! TGAACGGCGACTACTTTTAA+TGG - chr8.1:3145385-3145404 None:intergenic 40.0%
!! TGTATTTTGGGTGGATGGAA+AGG + chr8.1:3145902-3145921 MS.gene035628:CDS 40.0%
!!! CCCATTTTTTTATGGCACCT+AGG + chr8.1:3143556-3143575 MS.gene035628:intron 40.0%
!!! TGCTCTTCCTGCTATTTTCT+GGG - chr8.1:3147159-3147178 None:intergenic 40.0%
AAAGAGGAATTCTTAGGCGC+GGG - chr8.1:3144852-3144871 None:intergenic 45.0%
AACACCAAGAAGTGACAGAG+TGG - chr8.1:3144964-3144983 None:intergenic 45.0%
AGAGGAGATCGAAGTTGTGA+TGG + chr8.1:3144245-3144264 MS.gene035628:intron 45.0%
AGTCACATGCATGGACAATG+AGG - chr8.1:3145051-3145070 None:intergenic 45.0%
ATGACGTGGACCACTAAATG+AGG - chr8.1:3144728-3144747 None:intergenic 45.0%
CACAACCGAGTAATCTTGAC+TGG - chr8.1:3146037-3146056 None:intergenic 45.0%
CACGGAGGATATGAGAAAGT+TGG + chr8.1:3145717-3145736 MS.gene035628:CDS 45.0%
CTGGATGTCATCTCAGGAAA+AGG + chr8.1:3146720-3146739 MS.gene035628:CDS 45.0%
GAAAGAGGAATTCTTAGGCG+CGG - chr8.1:3144853-3144872 None:intergenic 45.0%
GAAGGTCTCTCAATTGTTGG+AGG + chr8.1:3147036-3147055 MS.gene035628:CDS 45.0%
GTCTCTCAATTGTTGGAGGA+AGG + chr8.1:3147040-3147059 MS.gene035628:CDS 45.0%
TACCGGAAAAGTCGCTACAA+AGG - chr8.1:3143488-3143507 None:intergenic 45.0%
TAGGGGAAGATAGAGTCAAC+TGG + chr8.1:3144213-3144232 MS.gene035628:intron 45.0%
TATCAGACTTAGAGGATGGG+TGG + chr8.1:3146372-3146391 MS.gene035628:CDS 45.0%
TCCGAAGGTCTCTCAATTGT+TGG + chr8.1:3147033-3147052 MS.gene035628:CDS 45.0%
TGACGTGGACCACTAAATGA+GGG - chr8.1:3144727-3144746 None:intergenic 45.0%
TGGAGATGCAAATGCAATGC+TGG + chr8.1:3145800-3145819 MS.gene035628:CDS 45.0%
TTCATGCAGAAAGTCCCCAA+AGG + chr8.1:3144928-3144947 MS.gene035628:intron 45.0%
! ACAAGGACGTGGATTTTGTG+CGG - chr8.1:3145475-3145494 None:intergenic 45.0%
! ATCTGCTGGTAGCGTGAAAA+AGG + chr8.1:3147276-3147295 MS.gene035628:CDS 45.0%
! CGGGAAAATGCTTGTCGTTT+GGG - chr8.1:3144833-3144852 None:intergenic 45.0%
! CTCATATCCTCCGTGTTGTT+TGG - chr8.1:3145712-3145731 None:intergenic 45.0%
! GAGTGGTGGTGTTTATCCTT+TGG - chr8.1:3144947-3144966 None:intergenic 45.0%
! GTGGTGGTGTTTATCCTTTG+GGG - chr8.1:3144945-3144964 None:intergenic 45.0%
! TTGATGGCCCTCCAATATAG+TGG + chr8.1:3146887-3146906 MS.gene035628:CDS 45.0%
! TTTGTAGCGACTTTTCCGGT+AGG + chr8.1:3143487-3143506 MS.gene035628:intron 45.0%
!! CCCGACATCGTTTTTGTCTT+TGG + chr8.1:3146201-3146220 MS.gene035628:CDS 45.0%
!!! CTGCCCCACCCATTTTTTTA+TGG + chr8.1:3143548-3143567 MS.gene035628:intron 45.0%
!!! GGTGATGGAGTTTTAAGGAC+TGG - chr8.1:3146626-3146645 None:intergenic 45.0%
!!! GTGCTCTTCCTGCTATTTTC+TGG - chr8.1:3147160-3147179 None:intergenic 45.0%
!!! TTGTTTTTATTTTTTTTTAA+TGG + chr8.1:3144803-3144822 MS.gene035628:intron 5.0%
AAACAGGGGAGTCACATGCA+TGG - chr8.1:3145060-3145079 None:intergenic 50.0%
AAGTGGCATGGAAGTGGTGT+AGG + chr8.1:3144194-3144213 MS.gene035628:intron 50.0%
ACAATGGCCAAACAACACGG+AGG + chr8.1:3145702-3145721 MS.gene035628:CDS 50.0%
ACATGGCTTAAGGCAATGGG+TGG + chr8.1:3146104-3146123 MS.gene035628:CDS 50.0%
ACCAAGAAGTGACAGAGTGG+TGG - chr8.1:3144961-3144980 None:intergenic 50.0%
AGAGTGGGATGCATCGAAAG+AGG + chr8.1:3146808-3146827 MS.gene035628:CDS 50.0%
AGTGGCATGGAAGTGGTGTA+GGG + chr8.1:3144195-3144214 MS.gene035628:intron 50.0%
CATGGCTTAAGGCAATGGGT+GGG + chr8.1:3146105-3146124 MS.gene035628:CDS 50.0%
GATGGAAAATGGGTGGTCCA+TGG + chr8.1:3145540-3145559 MS.gene035628:CDS 50.0%
GCCACAATGGCCAAACAACA+CGG + chr8.1:3145699-3145718 MS.gene035628:CDS 50.0%
GCGGGAAAATGCTTGTCGTT+TGG - chr8.1:3144834-3144853 None:intergenic 50.0%
GGTCGAAAGAGAACATCTGC+TGG + chr8.1:3147262-3147281 MS.gene035628:CDS 50.0%
TCCACCTTCAAACAAGGACG+TGG - chr8.1:3145486-3145505 None:intergenic 50.0%
TGCATGTCATGCACTGGAAG+AGG + chr8.1:3147090-3147109 MS.gene035628:CDS 50.0%
TTGAAGGTGGAATGTGAGGC+TGG + chr8.1:3145495-3145514 MS.gene035628:CDS 50.0%
! ACCACCACTCTGTCACTTCT+TGG + chr8.1:3144957-3144976 MS.gene035628:intron 50.0%
! GCTGGTAGCGTGAAAAAGGT+TGG + chr8.1:3147280-3147299 MS.gene035628:CDS 50.0%
! TCCACGTCCTTGTTTGAAGG+TGG + chr8.1:3145482-3145501 MS.gene035628:CDS 50.0%
!! AGAAAGGTGCCTGAGAAGCT+TGG + chr8.1:3146233-3146252 MS.gene035628:CDS 50.0%
!! TCCGTGTTGTTTGGCCATTG+TGG - chr8.1:3145703-3145722 None:intergenic 50.0%
GATCAAGAGGGCTTGCCTAC+CGG - chr8.1:3143505-3143524 None:intergenic 55.0%
GTGGCATGGAAGTGGTGTAG+GGG + chr8.1:3144196-3144215 MS.gene035628:intron 55.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 3143451 3147309 3143451 ID=MS.gene035628
chr8.1 mRNA 3143451 3147309 3143451 ID=MS.gene035628.t1;Parent=MS.gene035628
chr8.1 exon 3143451 3143504 3143451 ID=MS.gene035628.t1.exon1;Parent=MS.gene035628.t1
chr8.1 CDS 3143451 3143504 3143451 ID=cds.MS.gene035628.t1;Parent=MS.gene035628.t1
chr8.1 exon 3145195 3146416 3145195 ID=MS.gene035628.t1.exon2;Parent=MS.gene035628.t1
chr8.1 CDS 3145195 3146416 3145195 ID=cds.MS.gene035628.t1;Parent=MS.gene035628.t1
chr8.1 exon 3146447 3147309 3146447 ID=MS.gene035628.t1.exon3;Parent=MS.gene035628.t1
chr8.1 CDS 3146447 3147309 3146447 ID=cds.MS.gene035628.t1;Parent=MS.gene035628.t1
Gene Sequence

>MS.gene035628

ATGATTCCAACAATCTCTATCAGAGAAAGCCGAACCTTTGTAGCGACTTTTCCGGTAGGCAAGCCCTCTTGATCAAACTGTTCAACTAGATTCTTTGCTGCCCCACCCATTTTTTTATGGCACCTAGGATAGTTTATACTCTTGGGGCTAACCATTGCATGATTATGAGTATTGTTAAATGTAATGATAGTCCATTTGGGCCTCATTTTTGCTTTTGAAACTACAAGTGTTGCCTTACAATCAGTTCTTGATGTTGAACATCTTTTTTTTCCTTTTTACTGTGATTGTATTGCTTTCTTCTTTGTCATTACTATCAACATGTTGGCCAACATTAGAGCAAACAAATATGCACAAATTTGTCTTAGTTGAACGTGTACGAATTCCAAAACCTTCTTTTTTAGCAAATGATGTGTATAAATTTTTAACATCATCAAGAGAGTCAAATTCCATATCAATACAAGGATCAATATTTTGATGCTCATGAACATCTAAGTCATGCTCAGGGTTTCTTCTTTCTTGAGAATTTTGATTGCACTATATATTAAAATAAAAAACATCGTAAAGTCTTAAAAATTAAAATTCTATGAAATACATATGATTTTGTTAAGAGATATATAAAAGACATAAAGCAAATGTAATTGAAGAATTAATTCATAATACCTCTATGTCCTCCATGTTATGACTATCTTCTTCGGCATTTGATTTTGGACTTTCCATTGTTATGTGACTTTTCTTCTTAAAAAAAGTGGCATGGAAGTGGTGTAGGGGAAGATAGAGTCAACTGGTATAGGAAAAGAGGAGATCGAAGTTGTGATGGTGAATAGCTTGGGAAGTGAAGCATAAAATACTGGTAAAGAAAAAAAAATTAGGGCAATTAGGTTTTGGAGTGAAATAGGGGTAACTCATGTGCAAGAGAGCCCTAAGAATAAACATGTAGAATCCTTAAAAAAAAAAAATAGAATCAGAGAATTTTTGGAAAGGGATTAACCAAAAGAAGAAAGAATAAATTATTTATAAAAATAAAAGGTGGGTCACTTGATCAAGCATGTGAGTACTTAATGAGTTTATGGGAGCCGTTAGATTAAAACCGTATTAATGGCTAGGATTTGATGTCAAATTTAATTTGACACCTTGGTGTCATTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAGAGTAATGCTAGCATCAGGCGCTTTGACACTCTCTTTATGCACTCCCTCATTTAGTGGTCCACGTCATACTATTCTTTTAACTTCTGACTTGGTTACCGGTTCACCAAAATCAACACATTTAATTGTTTTTATTTTTTTTTAATGGATATCCCAAACGACAAGCATTTTCCCGCGCCTAAGAATTCCTCTTTCCTTATCTCACACATCGCTGTTTCAACTATCAGAAGCTCTGCCATTCAGCCTTTGTTTCATGCAGAAAGTCCCCAAAGGATAAACACCACCACTCTGTCACTTCTTGGTGTTTTTTTTCTCACAATTCCAACAAAAGAGTAAGAGTATTTCACTTTTTAAGGTATGCTTTTGTTCTCCTCATTGTCCATGCATGTGACTCCCCTGTTTGTTCAACATGAATTTGGTACTATCACTTTATCATTCTAAAATATTTTATTGAGTTTTTTATGTTTGTTCAACATGTATTGATAATTAGTTGTAACGATTTGAATACATATTTTAGGAATTAATGGAACCCATTGATGAAAATGAAGAACATGTTATAAATGAGACCGTCAATAATGAATCATATGTTGGCGATTTAGAGGCTAACAATGTTCAACAACCTTCTCTTGGAATGAAATTTGAGTCACAAGAAGATGCTTATTCTTTCTATGTTCAATATGCTAAAAGTGTCGGATTTGGTGTATCCATTAAAAGTAGTCGCCGTTCAAAAATTTCTAGAGAATTTATTGATGTGAAATATGCTTGCACACGATATGGGAAAAAGCGAGAGTCGACCGCACAAAATCCACGTCCTTGTTTGAAGGTGGAATGTGAGGCTGGCTTACATATTAAAAGAAGATGTGATGGAAAATGGGTGGTCCATGGCTTCATCAAAGATCACAATCATGAACTTTTCCCAACATATGCACATTATTTTCCTTGCCATAGAACCATCAATAAAGCTCAGCAGAATTGTATTGAAACTTTGCAACATGTTGGAGTGAGAACAAGCAAAATTTATGCCACAATGGCCAAACAACACGGAGGATATGAGAAAGTTGGTTGCTTGGAGAAAGATGTTAGAAATTATTTAGATAAGGACCGTCGTTTGAATTTAGAATCTGGAGATGCAAATGCAATGCTGGAGTATTTTATGCGTATGCAAGAAGAAAATTCGAGATTCTTTTATGCATTTGATTTGGATGATGATGGTCGTGTAAAAAATGTATTTTGGGTGGATGGAAAGGGTAGAGATGATTATCAAGTGTTTGGAGATGTGATTTCCTTTGATACTACATATATCACAAACAAATATAAAATGCCATTTGCTCCATTCATTGGTGTGAATAATCACTTCCAGTCAAGATTACTCGGTTGTGCATTACTAGCAAATGAGACCTCTGAGACTTTCAAATGGTTGATGAAAACATGGCTTAAGGCAATGGGTGGGAAACCTCCAAATGCAATGATAACTGACCAAGACAGATCAATGAAAGTGGCTATTGAAGAGGTATTTCCAAATACCCGACATCGTTTTTGTCTTTGGCATATACTTAGAAAGGTGCCTGAGAAGCTTGGTCATGTAATAAGAAATAATGAAGATTTCATGGGATATTTTGACGCATGCATATACAAGTCTCTGTCAATAGAACAGTTTGAAGTTAAATGGGCAGAAATGGTAGAGAAATTTCAACTATCAGACTTAGAGGATGGGTGGATTCAGTCTTTATATGAAGAACGTTAACATTGGGTTCCTGTTTACATGAAAGATACTTTTTTCGGTGGCATGTCAACAACTCAAAGATCAGAGAGCATCAACTCTTTTTTTGACAAATATGTAGGCAAGAAAACTACATTGAAAGAATTTGTTGAAAAATATGAAGTTGCTTTGGAAGATAGGGAAGAAGCAGAAATGCATGCTGATTTTAATACATGGCATAAACAACCAGTCCTTAAAACTCCATCACCTTTTGAGAAGCAAATGTCAATGATTTATACACATGAAGTATTCAAAAAGTTCCAAGTTGAAATTACAGGATTATCTGGATGTCATCTCAGGAAAAGGAACGAAGATAGTCAGCTCACCTCTTTTACAATATTCGACTTCGGAAATAGGGAAGAATTTGTTGTAGAGTGGGATGCATCGAAAGAGGAAATTTCTTGCATATGTCGTTTGTTTGAGTATAATGGGTATCTTTGTAGACATTCGTTGATGGCCCTCCAATATAGTGGTATCTTTGTTGTCCCATCACACTACATATTGAAAAGATGGACAAAGGATATCAGAAGTCGGCATCATAAAAGAAATATTAATGAAGATATTTGTTCGAAGAAGGAGAGATATGATCGTTTGTATCCGAAGGTCTCTCAATTGTTGGAGGAAGGATCATTAACTAATGAGAGTTATAACTTTGCATGTCATGCACTGGAAGAGGCCTTGAAACAATGTGCATTCCTTAACCGATCCTTAAAAAATAGCCCAGAAAATAGCAGGAAGAGCACTTTGCTTGACAAGAAACTACTTGATCCTCAAGTTTCGAAAACAAAAGGGGCACCGAAAAGAATAAAGAGCGGCATTGAAAGAGGTCGAAAGAGAACATCTGCTGGTAGCGTGAAAAAGGTTGGAATTTAA
Protein sequence

>MS.gene035628.t1

MIPTISIRESRTFVATFPELMEPIDENEEHVINETVNNESYVGDLEANNVQQPSLGMKFESQEDAYSFYVQYAKSVGFGVSIKSSRRSKISREFIDVKYACTRYGKKRESTAQNPRPCLKVECEAGLHIKRRCDGKWVVHGFIKDHNHELFPTYAHYFPCHRTINKAQQNCIETLQHVGVRTSKIYATMAKQHGGYEKVGCLEKDVRNYLDKDRRLNLESGDANAMLEYFMRMQEENSRFFYAFDLDDDGRVKNVFWVDGKGRDDYQVFGDVISFDTTYITNKYKMPFAPFIGVNNHFQSRLLGCALLANETSETFKWLMKTWLKAMGGKPPNAMITDQDRSMKVAIEEVFPNTRHRFCLWHILRKVPEKLGHVIRNNEDFMGYFDACIYKSLSIEQFEVKWAEMVEKFQLSDLEDGWIQSLYEEHTFFGGMSTTQRSESINSFFDKYVGKKTTLKEFVEKYEVALEDREEAEMHADFNTWHKQPVLKTPSPFEKQMSMIYTHEVFKKFQVEITGLSGCHLRKRNEDSQLTSFTIFDFGNREEFVVEWDASKEEISCICRLFEYNGYLCRHSLMALQYSGIFVVPSHYILKRWTKDIRSRHHKRNINEDICSKKERYDRLYPKVSQLLEEGSLTNESYNFACHALEEALKQCAFLNRSLKNSPENSRKSTLLDKKLLDPQVSKTKGAPKRIKSGIERGRKRTSAGSVKKVGI