Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035820.t1 | XP_013459878.1 | 98.4 | 123 | 2 | 0 | 1 | 123 | 43 | 165 | 5.80E-63 | 250 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035820.t1 | Q6K687 | 68.5 | 124 | 38 | 1 | 1 | 123 | 47 | 170 | 6.3e-42 | 171.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035820.t1 | A0A072UVS7 | 98.4 | 123 | 2 | 0 | 1 | 123 | 43 | 165 | 4.2e-63 | 250.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene035820.t1 | TF | C3H |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035820.t1 | MTR_3g053700 | 98.374 | 123 | 2 | 0 | 1 | 123 | 43 | 165 | 2.00e-87 | 262 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035820.t1 | AT2G24830 | 62.903 | 124 | 39 | 2 | 1 | 123 | 43 | 160 | 1.63e-45 | 154 |
Find 21 sgRNAs with CRISPR-Local
Find 137 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAATAATCTCGCACGCTTT+AGG | 0.280179 | 3.3:-43853771 | None:intergenic |
| GGAACTTGTTCAGGCAATTA+AGG | 0.282463 | 3.3:+43853726 | MS.gene035820:CDS |
| GGTTCACGAGGAACTTGTTC+AGG | 0.382347 | 3.3:+43853717 | None:intergenic |
| TTACAACAGCGATGTCGATT+TGG | 0.401387 | 3.3:+43856073 | MS.gene035820:CDS |
| TGTAGATTCCGTTACAAAGA+TGG | 0.463502 | 3.3:+43853919 | MS.gene035820:CDS |
| CAATGGTCAAGTGATGCAAT+TGG | 0.476631 | 3.3:+43853951 | MS.gene035820:CDS |
| GGCTCTGGTTCAACATCTGC+AGG | 0.485074 | 3.3:-43853862 | None:intergenic |
| GCACAGCACTGTGTCTGCTT+CGG | 0.493677 | 3.3:-43853794 | None:intergenic |
| TCCTACATCTGAAAATATGC+TGG | 0.524946 | 3.3:+43854005 | MS.gene035820:CDS |
| GCAATTAAGGATGCCGAGGA+AGG | 0.547779 | 3.3:+43853739 | MS.gene035820:CDS |
| TCCGTTACAAAGATGGGCGT+TGG | 0.550166 | 3.3:+43853926 | MS.gene035820:CDS |
| GTAGATTCCGTTACAAAGAT+GGG | 0.552313 | 3.3:+43853920 | MS.gene035820:CDS |
| AAAGATGGGCGTTGGTACAA+TGG | 0.554183 | 3.3:+43853934 | MS.gene035820:CDS |
| TTAGCAGCTTACCATGGGAT+AGG | 0.568857 | 3.3:-43856108 | None:intergenic |
| TCAACATCTGCAGGATCAAG+TGG | 0.594691 | 3.3:-43853853 | None:intergenic |
| TAGGTGAAGAAGTCCTTCCT+CGG | 0.599243 | 3.3:-43853752 | None:intergenic |
| ACCAACGCCCATCTTTGTAA+CGG | 0.601052 | 3.3:-43853927 | None:intergenic |
| AGTAACTGTCGCCTATCCCA+TGG | 0.613342 | 3.3:+43856097 | MS.gene035820:CDS |
| GATGCAATTGGATAATTCAG+TGG | 0.621983 | 3.3:+43853963 | MS.gene035820:CDS |
| GTCGATATCCCAGGTTCACG+AGG | 0.623116 | 3.3:+43853705 | None:intergenic |
| TCAGGCAATTAAGGATGCCG+AGG | 0.649742 | 3.3:+43853735 | MS.gene035820:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACTTAAATCATTTATAA+AGG | - | chr3.3:43855570-43855589 | None:intergenic | 10.0% |
| !!! | ATATCAACTTTTATAATTTT+TGG | - | chr3.3:43855382-43855401 | None:intergenic | 10.0% |
| !!! | TTTTTTTGTTTTTGTTTTAA+AGG | + | chr3.3:43855646-43855665 | MS.gene035820:intron | 10.0% |
| !! | TCTTAAAAATTTAATCTTGT+TGG | + | chr3.3:43854764-43854783 | MS.gene035820:intron | 15.0% |
| !! | TGGAAAAATTTATTAGAAAA+TGG | + | chr3.3:43854915-43854934 | MS.gene035820:intron | 15.0% |
| !! | TGGTATTATAAAGTAATTAA+TGG | - | chr3.3:43855848-43855867 | None:intergenic | 15.0% |
| !! | TTAATTACTTTATAATACCA+TGG | + | chr3.3:43855848-43855867 | MS.gene035820:intron | 15.0% |
| !!! | AACAAGATTAAATTTTTAAG+AGG | - | chr3.3:43854765-43854784 | None:intergenic | 15.0% |
| !!! | ACAAGATTAAATTTTTAAGA+GGG | - | chr3.3:43854764-43854783 | None:intergenic | 15.0% |
| !! | AAAGTTCTTATTGCAAAATA+GGG | + | chr3.3:43854821-43854840 | MS.gene035820:intron | 20.0% |
| !! | AATGTAACATATATAGAGAA+GGG | + | chr3.3:43854217-43854236 | MS.gene035820:intron | 20.0% |
| !! | TAAAGTTCTTATTGCAAAAT+AGG | + | chr3.3:43854820-43854839 | MS.gene035820:intron | 20.0% |
| !! | TATCATATAAAATCACTTAC+AGG | + | chr3.3:43854630-43854649 | MS.gene035820:intron | 20.0% |
| !! | TCTACTTCTAAATAAATCTA+GGG | - | chr3.3:43854281-43854300 | None:intergenic | 20.0% |
| !!! | ACTTTTATAATTTTTGGTGA+TGG | - | chr3.3:43855376-43855395 | None:intergenic | 20.0% |
| !!! | ATTTTTATTCCTCAAAATCT+AGG | + | chr3.3:43855967-43855986 | MS.gene035820:intron | 20.0% |
| !!! | CAACTTTTAAAAGAATAACA+TGG | - | chr3.3:43854540-43854559 | None:intergenic | 20.0% |
| !!! | TCAACTTTTTTTTTGGTTTT+TGG | + | chr3.3:43855197-43855216 | MS.gene035820:intron | 20.0% |
| !!! | TCGAATTTCAACTTTTTTTT+TGG | + | chr3.3:43855190-43855209 | MS.gene035820:intron | 20.0% |
| !!! | TGTTTTTATATAGTCTCATA+AGG | - | chr3.3:43854427-43854446 | None:intergenic | 20.0% |
| !!! | TTATGTCAAGTTAATCTTTT+AGG | + | chr3.3:43854857-43854876 | MS.gene035820:intron | 20.0% |
| !!! | TTTTTTATTTGTTATAGCAG+TGG | - | chr3.3:43854150-43854169 | None:intergenic | 20.0% |
| ! | AAACAACACTTAAAAAGGAA+TGG | - | chr3.3:43855298-43855317 | None:intergenic | 25.0% |
| ! | AACAAAGACAAAAACCAATA+TGG | - | chr3.3:43855749-43855768 | None:intergenic | 25.0% |
| ! | ACATTTACCTAACTAGATTT+AGG | - | chr3.3:43854656-43854675 | None:intergenic | 25.0% |
| ! | AGAGAAAAAAGCAAATGATT+AGG | + | chr3.3:43854298-43854317 | MS.gene035820:intron | 25.0% |
| ! | ATAGCAGCAAAAAAAAAAAG+AGG | - | chr3.3:43855168-43855187 | None:intergenic | 25.0% |
| ! | ATATATAGAGAAGGGAAAAT+AGG | + | chr3.3:43854225-43854244 | MS.gene035820:intron | 25.0% |
| ! | ATATGTCAAATGAGTTACTT+AGG | - | chr3.3:43855067-43855086 | None:intergenic | 25.0% |
| ! | ATTTGATGTTTCAACAGTTT+AGG | + | chr3.3:43855014-43855033 | MS.gene035820:intron | 25.0% |
| ! | CTCTACTTCTAAATAAATCT+AGG | - | chr3.3:43854282-43854301 | None:intergenic | 25.0% |
| ! | GAATGTAACATATATAGAGA+AGG | + | chr3.3:43854216-43854235 | MS.gene035820:intron | 25.0% |
| ! | GTCAAAAACAACACTTAAAA+AGG | - | chr3.3:43855303-43855322 | None:intergenic | 25.0% |
| ! | TAAATGTTGTCTTGGTTTAA+GGG | + | chr3.3:43854392-43854411 | MS.gene035820:intron | 25.0% |
| ! | TATTCTTAGCTAGTAAAATC+TGG | + | chr3.3:43855700-43855719 | MS.gene035820:intron | 25.0% |
| !! | GAAGAAAAAAGCTTTTCTAT+TGG | + | chr3.3:43853889-43853908 | MS.gene035820:CDS | 25.0% |
| !!! | ATATTGGTCTTTTTTAAGGT+TGG | - | chr3.3:43854883-43854902 | None:intergenic | 25.0% |
| !!! | ATCTCTTTTTTCGTCTATTT+TGG | + | chr3.3:43854055-43854074 | MS.gene035820:intron | 25.0% |
| !!! | ATGATTTTTCTTGTTTTCCA+TGG | - | chr3.3:43855868-43855887 | None:intergenic | 25.0% |
| !!! | CAAGATATTGGTCTTTTTTA+AGG | - | chr3.3:43854887-43854906 | None:intergenic | 25.0% |
| AAAGTAATTAATGGCAGATG+AGG | - | chr3.3:43855839-43855858 | None:intergenic | 30.0% | |
| AAAGTAGATTATGTGAATGG+TGG | + | chr3.3:43855485-43855504 | MS.gene035820:intron | 30.0% | |
| AACACTTAAAAAGGAATGGA+GGG | - | chr3.3:43855294-43855313 | None:intergenic | 30.0% | |
| AGCTAAGAATAGTTCATTGA+TGG | - | chr3.3:43855691-43855710 | None:intergenic | 30.0% | |
| ATATGTGTGTGAAGTAGATA+TGG | + | chr3.3:43855911-43855930 | MS.gene035820:intron | 30.0% | |
| ATTTCGTCGTCTTAACATTT+CGG | + | chr3.3:43855783-43855802 | MS.gene035820:intron | 30.0% | |
| CTAAATGTTGTCTTGGTTTA+AGG | + | chr3.3:43854391-43854410 | MS.gene035820:intron | 30.0% | |
| CTAAGAATAGTTCATTGATG+GGG | - | chr3.3:43855689-43855708 | None:intergenic | 30.0% | |
| GCTAAGAATAGTTCATTGAT+GGG | - | chr3.3:43855690-43855709 | None:intergenic | 30.0% | |
| GTCAAAGTAGATTATGTGAA+TGG | + | chr3.3:43855482-43855501 | MS.gene035820:intron | 30.0% | |
| GTTATAGCAGTGGAAATTAA+GGG | - | chr3.3:43854140-43854159 | None:intergenic | 30.0% | |
| GTTGAATTTACGCACAATAT+AGG | + | chr3.3:43854556-43854575 | MS.gene035820:intron | 30.0% | |
| TAGCATGCTTCAAAAAGATA+TGG | - | chr3.3:43854962-43854981 | None:intergenic | 30.0% | |
| TGTTATAGCAGTGGAAATTA+AGG | - | chr3.3:43854141-43854160 | None:intergenic | 30.0% | |
| TTATAGCAGTGGAAATTAAG+GGG | - | chr3.3:43854139-43854158 | None:intergenic | 30.0% | |
| ! | AGCTGATCATTTTCCTTTTA+TGG | - | chr3.3:43854373-43854392 | None:intergenic | 30.0% |
| ! | ATCATTTTCCTTTTATGGTG+TGG | - | chr3.3:43854368-43854387 | None:intergenic | 30.0% |
| ! | CTGGTATGCAAAATCATTTT+GGG | + | chr3.3:43854024-43854043 | MS.gene035820:intron | 30.0% |
| ! | TCATTTTCCTTTTATGGTGT+GGG | - | chr3.3:43854367-43854386 | None:intergenic | 30.0% |
| ! | TTTTGCTGAAGAAAAGAAAG+TGG | + | chr3.3:43853828-43853847 | MS.gene035820:CDS | 30.0% |
| !! | AATCTAGAACCTAGATTTTG+AGG | - | chr3.3:43855979-43855998 | None:intergenic | 30.0% |
| !! | AGTGTTTTGTTAGTGTAGTT+TGG | + | chr3.3:43855097-43855116 | MS.gene035820:intron | 30.0% |
| !! | CGGTCTTATTGAAATTCAAA+GGG | + | chr3.3:43854579-43854598 | MS.gene035820:intron | 30.0% |
| !! | GGATAAAACTCTAAAACACT+TGG | - | chr3.3:43854510-43854529 | None:intergenic | 30.0% |
| !!! | GAAAAGCTTTTTTCTTCTAG+CGG | - | chr3.3:43853886-43853905 | None:intergenic | 30.0% |
| !!! | GTTTTAGAGTTTTATCCTTG+TGG | + | chr3.3:43854513-43854532 | MS.gene035820:intron | 30.0% |
| AAAGAATAACATGGACCACA+AGG | - | chr3.3:43854531-43854550 | None:intergenic | 35.0% | |
| ACCAATATCTTGCTGACAAT+TGG | + | chr3.3:43854895-43854914 | MS.gene035820:intron | 35.0% | |
| ATAATAATCTCGCACGCTTT+AGG | - | chr3.3:43853774-43853793 | None:intergenic | 35.0% | |
| CAACACTTAAAAAGGAATGG+AGG | - | chr3.3:43855295-43855314 | None:intergenic | 35.0% | |
| CACTCTTTATTGTGCCATAT+TGG | + | chr3.3:43855732-43855751 | MS.gene035820:intron | 35.0% | |
| GAATTTACGCACAATATAGG+CGG | + | chr3.3:43854559-43854578 | MS.gene035820:intron | 35.0% | |
| GATGCAATTGGATAATTCAG+TGG | + | chr3.3:43853963-43853982 | MS.gene035820:CDS | 35.0% | |
| GTAAAGGTAAAGGGTAATGA+GGG | - | chr3.3:43854344-43854363 | None:intergenic | 35.0% | |
| GTAGATTCCGTTACAAAGAT+GGG | + | chr3.3:43853920-43853939 | MS.gene035820:CDS | 35.0% | |
| TCCAATTGTCAGCAAGATAT+TGG | - | chr3.3:43854899-43854918 | None:intergenic | 35.0% | |
| TCCTACATCTGAAAATATGC+TGG | + | chr3.3:43854005-43854024 | MS.gene035820:CDS | 35.0% | |
| TGATCAGCTAAATGTTGTCT+TGG | + | chr3.3:43854384-43854403 | MS.gene035820:intron | 35.0% | |
| TGGGATAGTTATTCATGGTA+TGG | + | chr3.3:43854481-43854500 | MS.gene035820:intron | 35.0% | |
| TGTAGATTCCGTTACAAAGA+TGG | + | chr3.3:43853919-43853938 | MS.gene035820:CDS | 35.0% | |
| TTAATGTGTTAAGTCCTCAC+AGG | + | chr3.3:43854449-43854468 | MS.gene035820:intron | 35.0% | |
| TTACAGGCCTAAATCTAGTT+AGG | + | chr3.3:43854646-43854665 | MS.gene035820:intron | 35.0% | |
| ! | ACCAGCATATTTTCAGATGT+AGG | - | chr3.3:43854009-43854028 | None:intergenic | 35.0% |
| ! | CATTTTCCTTTTATGGTGTG+GGG | - | chr3.3:43854366-43854385 | None:intergenic | 35.0% |
| ! | GCTGGTATGCAAAATCATTT+TGG | + | chr3.3:43854023-43854042 | MS.gene035820:intron | 35.0% |
| !! | GCGGTCTTATTGAAATTCAA+AGG | + | chr3.3:43854578-43854597 | MS.gene035820:intron | 35.0% |
| !!! | GCTTTTGGGATAGTTATTCA+TGG | + | chr3.3:43854476-43854495 | MS.gene035820:intron | 35.0% |
| !!! | TGACGAACTGTTGATTTTTC+AGG | - | chr3.3:43854184-43854203 | None:intergenic | 35.0% |
| AAATAGGCAACACAGGCATA+TGG | + | chr3.3:43854241-43854260 | MS.gene035820:intron | 40.0% | |
| ATGCTACAATCGTGCAGTTT+AGG | + | chr3.3:43854976-43854995 | MS.gene035820:intron | 40.0% | |
| CAATGGTCAAGTGATGCAAT+TGG | + | chr3.3:43853951-43853970 | MS.gene035820:CDS | 40.0% | |
| CACCCTTAAAAAGGAACAGA+GGG | + | chr3.3:43855523-43855542 | MS.gene035820:intron | 40.0% | |
| GGTAAAGGTAAAGGGTAATG+AGG | - | chr3.3:43854345-43854364 | None:intergenic | 40.0% | |
| GTGTCACAGTTTCAAGAGTT+GGG | - | chr3.3:43855143-43855162 | None:intergenic | 40.0% | |
| TCAAACGACCACCCTTAAAA+AGG | + | chr3.3:43855514-43855533 | MS.gene035820:intron | 40.0% | |
| TGCTACAATCGTGCAGTTTA+GGG | + | chr3.3:43854977-43854996 | MS.gene035820:intron | 40.0% | |
| TGTGTCACAGTTTCAAGAGT+TGG | - | chr3.3:43855144-43855163 | None:intergenic | 40.0% | |
| ! | ACTCCCTCTGTTCCTTTTTA+AGG | - | chr3.3:43855529-43855548 | None:intergenic | 40.0% |
| ! | CTCCCTCTGTTCCTTTTTAA+GGG | - | chr3.3:43855528-43855547 | None:intergenic | 40.0% |
| ! | GGAACTTGTTCAGGCAATTA+AGG | + | chr3.3:43853726-43853745 | MS.gene035820:CDS | 40.0% |
| ! | GTAAAGGGTAATGAGGGTAT+TGG | - | chr3.3:43854338-43854357 | None:intergenic | 40.0% |
| ! | TTACAACAGCGATGTCGATT+TGG | + | chr3.3:43856073-43856092 | MS.gene035820:CDS | 40.0% |
| !! | GATTATGTGAATGGTGGACA+TGG | + | chr3.3:43855491-43855510 | MS.gene035820:intron | 40.0% |
| !!! | TCCTCACAGGTTTAGCTTTT+GGG | + | chr3.3:43854462-43854481 | MS.gene035820:intron | 40.0% |
| ACAGTTTCAAGAGTTGGGTC+AGG | - | chr3.3:43855138-43855157 | None:intergenic | 45.0% | |
| ACCAACGCCCATCTTTGTAA+CGG | - | chr3.3:43853930-43853949 | None:intergenic | 45.0% | |
| ATGGTGTGGGGTAAAGGTAA+AGG | - | chr3.3:43854354-43854373 | None:intergenic | 45.0% | |
| CAAAGGGTTCTTGTGTGAGT+GGG | + | chr3.3:43854595-43854614 | MS.gene035820:intron | 45.0% | |
| CAGTTTCAAGAGTTGGGTCA+GGG | - | chr3.3:43855137-43855156 | None:intergenic | 45.0% | |
| CCACCCTTAAAAAGGAACAG+AGG | + | chr3.3:43855522-43855541 | MS.gene035820:intron | 45.0% | |
| CCTTTACCCCACACCATAAA+AGG | + | chr3.3:43854357-43854376 | MS.gene035820:intron | 45.0% | |
| GAACTTGCACATCTGCACTT+TGG | - | chr3.3:43856050-43856069 | None:intergenic | 45.0% | |
| GAAGGGAAAATAGGCAACAC+AGG | + | chr3.3:43854234-43854253 | MS.gene035820:intron | 45.0% | |
| GCTACAATCGTGCAGTTTAG+GGG | + | chr3.3:43854978-43854997 | MS.gene035820:intron | 45.0% | |
| TAGGTGAAGAAGTCCTTCCT+CGG | - | chr3.3:43853755-43853774 | None:intergenic | 45.0% | |
| TCAAAGGGTTCTTGTGTGAG+TGG | + | chr3.3:43854594-43854613 | MS.gene035820:intron | 45.0% | |
| TCAACATCTGCAGGATCAAG+TGG | - | chr3.3:43853856-43853875 | None:intergenic | 45.0% | |
| TCCCAAAAGCTAAACCTGTG+AGG | - | chr3.3:43854466-43854485 | None:intergenic | 45.0% | |
| TGATGGGGTGATTCAGTGAT+TGG | - | chr3.3:43855674-43855693 | None:intergenic | 45.0% | |
| TGGTGTGGGGTAAAGGTAAA+GGG | - | chr3.3:43854353-43854372 | None:intergenic | 45.0% | |
| ! | CCTTTTATGGTGTGGGGTAA+AGG | - | chr3.3:43854360-43854379 | None:intergenic | 45.0% |
| ! | GTGCATTGACATGTGAGAAG+TGG | - | chr3.3:43855325-43855344 | None:intergenic | 45.0% |
| !! | AAAGATGGGCGTTGGTACAA+TGG | + | chr3.3:43853934-43853953 | MS.gene035820:CDS | 45.0% |
| !! | CCTCTGTTCCTTTTTAAGGG+TGG | - | chr3.3:43855525-43855544 | None:intergenic | 45.0% |
| !!! | CTTTTTTCTTCTAGCGGCTC+TGG | - | chr3.3:43853880-43853899 | None:intergenic | 45.0% |
| !!! | GTCCTCACAGGTTTAGCTTT+TGG | + | chr3.3:43854461-43854480 | MS.gene035820:intron | 45.0% |
| !! | ATAACAAATAAAAAAAAATA+AGG | + | chr3.3:43854155-43854174 | MS.gene035820:intron | 5.0% |
| !! | TAACAAATAAAAAAAAATAA+GGG | + | chr3.3:43854156-43854175 | MS.gene035820:intron | 5.0% |
| !! | TTTATGTTAATAAATAAATA+TGG | + | chr3.3:43855460-43855479 | MS.gene035820:intron | 5.0% |
| AGTAACTGTCGCCTATCCCA+TGG | + | chr3.3:43856097-43856116 | MS.gene035820:CDS | 50.0% | |
| GCAATTAAGGATGCCGAGGA+AGG | + | chr3.3:43853739-43853758 | MS.gene035820:CDS | 50.0% | |
| TCAGGCAATTAAGGATGCCG+AGG | + | chr3.3:43853735-43853754 | MS.gene035820:CDS | 50.0% | |
| TCCGTTACAAAGATGGGCGT+TGG | + | chr3.3:43853926-43853945 | MS.gene035820:CDS | 50.0% | |
| AAGAGTTGGGTCAGGGACTC+AGG | - | chr3.3:43855130-43855149 | None:intergenic | 55.0% | |
| GCACAGCACTGTGTCTGCTT+CGG | - | chr3.3:43853797-43853816 | None:intergenic | 55.0% | |
| ! | GGCTCTGGTTCAACATCTGC+AGG | - | chr3.3:43853865-43853884 | None:intergenic | 55.0% |
| AGTTGGGTCAGGGACTCAGG+AGG | - | chr3.3:43855127-43855146 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 43853718 | 43856118 | 43853718 | ID=MS.gene035820 |
| chr3.3 | mRNA | 43853718 | 43856118 | 43853718 | ID=MS.gene035820.t1;Parent=MS.gene035820 |
| chr3.3 | exon | 43853718 | 43854026 | 43853718 | ID=MS.gene035820.t1.exon1;Parent=MS.gene035820.t1 |
| chr3.3 | CDS | 43853718 | 43854026 | 43853718 | ID=cds.MS.gene035820.t1;Parent=MS.gene035820.t1 |
| chr3.3 | exon | 43856058 | 43856118 | 43856058 | ID=MS.gene035820.t1.exon2;Parent=MS.gene035820.t1 |
| chr3.3 | CDS | 43856058 | 43856118 | 43856058 | ID=cds.MS.gene035820.t1;Parent=MS.gene035820.t1 |
| Gene Sequence |
| Protein sequence |
