Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene035944.t1 | XP_024639079.1 | 96.2 | 235 | 5 | 1 | 1 | 235 | 1 | 231 | 2.50E-107 | 398.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene035944.t1 | Q9LM46 | 58.7 | 235 | 96 | 1 | 1 | 235 | 1 | 234 | 2.0e-68 | 260.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene035944.t1 | G7KA12 | 89.8 | 235 | 4 | 2 | 1 | 235 | 1 | 215 | 9.3e-96 | 359.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene035944.t1 | TF | MADS-MIKC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene035944.t1 | MTR_5g061740 | 89.362 | 235 | 5 | 2 | 1 | 235 | 1 | 215 | 4.30e-150 | 421 |
MS.gene035944.t1 | MTR_4g084740 | 83.404 | 235 | 34 | 2 | 1 | 235 | 1 | 230 | 5.40e-138 | 390 |
MS.gene035944.t1 | MTR_3g102570 | 43.636 | 220 | 103 | 3 | 1 | 220 | 1 | 199 | 5.10e-54 | 176 |
MS.gene035944.t1 | MTR_5g041650 | 35.417 | 192 | 109 | 5 | 1 | 191 | 38 | 215 | 4.01e-28 | 110 |
MS.gene035944.t1 | MTR_3g005530 | 34.343 | 198 | 91 | 3 | 1 | 198 | 1 | 159 | 4.48e-26 | 101 |
MS.gene035944.t1 | MTR_4g108720 | 36.410 | 195 | 107 | 6 | 1 | 193 | 1 | 180 | 5.67e-26 | 103 |
MS.gene035944.t1 | MTR_7g075870 | 37.017 | 181 | 97 | 5 | 1 | 177 | 1 | 168 | 1.21e-24 | 97.4 |
MS.gene035944.t1 | MTR_2g017865 | 61.429 | 70 | 26 | 1 | 1 | 70 | 16 | 84 | 9.59e-24 | 96.3 |
MS.gene035944.t1 | MTR_3g452380 | 70.690 | 58 | 17 | 0 | 1 | 58 | 16 | 73 | 1.73e-23 | 95.1 |
MS.gene035944.t1 | MTR_7g075850 | 64.789 | 71 | 24 | 1 | 1 | 70 | 1 | 71 | 2.89e-23 | 94.7 |
MS.gene035944.t1 | MTR_5g046870 | 57.143 | 70 | 30 | 0 | 1 | 70 | 1 | 70 | 2.94e-23 | 90.9 |
MS.gene035944.t1 | MTR_7g075870 | 37.017 | 181 | 96 | 6 | 1 | 177 | 1 | 167 | 4.50e-23 | 93.2 |
MS.gene035944.t1 | MTR_8g087860 | 70.690 | 58 | 17 | 0 | 1 | 58 | 17 | 74 | 8.09e-23 | 93.2 |
MS.gene035944.t1 | MTR_0003s0590 | 36.792 | 212 | 86 | 6 | 1 | 210 | 1 | 166 | 1.65e-22 | 92.8 |
MS.gene035944.t1 | MTR_7g016600 | 58.571 | 70 | 29 | 0 | 1 | 70 | 1 | 70 | 2.00e-22 | 92.4 |
MS.gene035944.t1 | MTR_7g016630 | 32.105 | 190 | 89 | 2 | 1 | 190 | 1 | 150 | 3.21e-22 | 92.0 |
MS.gene035944.t1 | MTR_8g097090 | 58.571 | 70 | 29 | 0 | 1 | 70 | 1 | 70 | 4.03e-22 | 91.3 |
MS.gene035944.t1 | MTR_2g009890 | 33.333 | 189 | 86 | 3 | 1 | 189 | 1 | 149 | 4.50e-22 | 92.0 |
MS.gene035944.t1 | MTR_4g109830 | 36.994 | 173 | 98 | 4 | 1 | 172 | 1 | 163 | 4.98e-22 | 90.9 |
MS.gene035944.t1 | MTR_1g053070 | 59.722 | 72 | 28 | 1 | 1 | 72 | 1 | 71 | 7.57e-22 | 90.9 |
MS.gene035944.t1 | MTR_3g084980 | 58.571 | 70 | 29 | 0 | 1 | 70 | 1 | 70 | 7.73e-22 | 90.9 |
MS.gene035944.t1 | MTR_6g015975 | 58.571 | 70 | 29 | 0 | 1 | 70 | 1 | 70 | 1.10e-21 | 90.5 |
MS.gene035944.t1 | MTR_8g033220 | 60.000 | 70 | 27 | 1 | 1 | 70 | 1 | 69 | 1.24e-21 | 89.7 |
MS.gene035944.t1 | MTR_8g033220 | 60.000 | 70 | 27 | 1 | 1 | 70 | 1 | 69 | 1.52e-21 | 89.7 |
MS.gene035944.t1 | MTR_4g109810 | 57.143 | 70 | 30 | 0 | 1 | 70 | 1 | 70 | 1.76e-21 | 89.7 |
MS.gene035944.t1 | MTR_8g033270 | 60.000 | 70 | 27 | 1 | 1 | 70 | 1 | 69 | 2.23e-21 | 89.7 |
MS.gene035944.t1 | MTR_8g066260 | 37.572 | 173 | 97 | 5 | 1 | 172 | 1 | 163 | 7.88e-21 | 87.8 |
MS.gene035944.t1 | MTR_4g102530 | 58.571 | 70 | 28 | 1 | 1 | 70 | 1 | 69 | 1.61e-20 | 86.3 |
MS.gene035944.t1 | MTR_3g088615 | 53.521 | 71 | 32 | 1 | 1 | 70 | 1 | 71 | 4.13e-20 | 84.7 |
MS.gene035944.t1 | MTR_5g046790 | 54.286 | 70 | 32 | 0 | 1 | 70 | 1 | 70 | 4.80e-20 | 85.1 |
MS.gene035944.t1 | MTR_1g038300 | 54.930 | 71 | 31 | 1 | 1 | 70 | 1 | 71 | 6.56e-20 | 85.5 |
MS.gene035944.t1 | MTR_5g045560 | 39.837 | 123 | 60 | 3 | 1 | 123 | 8 | 116 | 6.90e-20 | 85.5 |
MS.gene035944.t1 | MTR_5g032520 | 65.517 | 58 | 20 | 0 | 1 | 58 | 1 | 58 | 1.08e-19 | 84.7 |
MS.gene035944.t1 | MTR_5g021270 | 64.912 | 57 | 20 | 0 | 1 | 57 | 1 | 57 | 1.40e-19 | 84.3 |
MS.gene035944.t1 | MTR_5g021270 | 64.912 | 57 | 20 | 0 | 1 | 57 | 1 | 57 | 1.40e-19 | 84.3 |
MS.gene035944.t1 | MTR_5g032150 | 65.517 | 58 | 20 | 0 | 1 | 58 | 1 | 58 | 1.59e-19 | 84.3 |
MS.gene035944.t1 | MTR_4g093030 | 58.209 | 67 | 28 | 0 | 1 | 67 | 1 | 67 | 1.64e-19 | 82.4 |
MS.gene035944.t1 | MTR_5g031000 | 38.806 | 134 | 71 | 4 | 1 | 127 | 1 | 130 | 2.21e-19 | 83.6 |
MS.gene035944.t1 | MTR_5g031000 | 38.806 | 134 | 71 | 4 | 1 | 127 | 1 | 130 | 2.29e-19 | 84.0 |
MS.gene035944.t1 | MTR_6g464720 | 52.857 | 70 | 33 | 0 | 1 | 70 | 1 | 70 | 2.30e-19 | 84.3 |
MS.gene035944.t1 | MTR_5g066960 | 57.377 | 61 | 26 | 0 | 1 | 61 | 1 | 61 | 4.39e-19 | 78.6 |
MS.gene035944.t1 | MTR_3g113030 | 63.158 | 57 | 21 | 0 | 1 | 57 | 1 | 57 | 5.01e-19 | 82.8 |
MS.gene035944.t1 | MTR_8g086290 | 53.521 | 71 | 32 | 1 | 2 | 72 | 12 | 81 | 5.16e-19 | 81.6 |
MS.gene035944.t1 | MTR_2g085280 | 33.333 | 183 | 101 | 5 | 2 | 183 | 9 | 171 | 1.20e-18 | 82.0 |
MS.gene035944.t1 | MTR_2g085250 | 33.333 | 183 | 101 | 5 | 2 | 183 | 9 | 171 | 1.20e-18 | 82.0 |
MS.gene035944.t1 | MTR_1g108580 | 45.882 | 85 | 45 | 1 | 2 | 86 | 9 | 92 | 1.27e-18 | 81.6 |
MS.gene035944.t1 | MTR_4g036050 | 41.379 | 87 | 51 | 0 | 1 | 87 | 1 | 87 | 1.97e-18 | 80.1 |
MS.gene035944.t1 | MTR_4g036050 | 41.379 | 87 | 51 | 0 | 1 | 87 | 1 | 87 | 2.28e-18 | 80.1 |
MS.gene035944.t1 | MTR_4g036050 | 41.379 | 87 | 51 | 0 | 1 | 87 | 1 | 87 | 2.38e-18 | 80.1 |
MS.gene035944.t1 | MTR_4g036050 | 41.379 | 87 | 51 | 0 | 1 | 87 | 1 | 87 | 3.04e-18 | 80.1 |
MS.gene035944.t1 | MTR_2g461710 | 58.621 | 58 | 24 | 0 | 1 | 58 | 1 | 58 | 3.15e-18 | 76.3 |
MS.gene035944.t1 | MTR_5g066180 | 50.000 | 70 | 34 | 1 | 1 | 70 | 1 | 69 | 3.77e-18 | 80.5 |
MS.gene035944.t1 | MTR_1g101970 | 60.345 | 58 | 23 | 0 | 1 | 58 | 1 | 58 | 8.63e-18 | 78.6 |
MS.gene035944.t1 | MTR_1g054265 | 49.315 | 73 | 36 | 1 | 1 | 73 | 1 | 72 | 8.98e-18 | 78.2 |
MS.gene035944.t1 | MTR_3g052920 | 53.521 | 71 | 32 | 1 | 2 | 72 | 9 | 78 | 9.05e-18 | 79.7 |
MS.gene035944.t1 | MTR_1g108510 | 51.389 | 72 | 34 | 1 | 2 | 73 | 9 | 79 | 1.16e-17 | 79.3 |
MS.gene035944.t1 | MTR_1g029670 | 49.296 | 71 | 35 | 1 | 1 | 70 | 1 | 71 | 1.28e-17 | 78.2 |
MS.gene035944.t1 | MTR_8g043650 | 44.706 | 85 | 46 | 1 | 2 | 86 | 9 | 92 | 1.29e-17 | 79.3 |
MS.gene035944.t1 | MTR_3g030770 | 51.389 | 72 | 34 | 1 | 2 | 73 | 9 | 79 | 1.44e-17 | 79.0 |
MS.gene035944.t1 | MTR_1g105910 | 43.529 | 85 | 47 | 1 | 2 | 86 | 9 | 92 | 2.22e-17 | 78.6 |
MS.gene035944.t1 | MTR_2g105290 | 52.113 | 71 | 33 | 1 | 1 | 71 | 11 | 80 | 2.56e-17 | 77.0 |
MS.gene035944.t1 | MTR_2g030740 | 44.706 | 85 | 46 | 1 | 2 | 86 | 9 | 92 | 2.81e-17 | 78.2 |
MS.gene035944.t1 | MTR_3g052870 | 43.529 | 85 | 47 | 1 | 2 | 86 | 9 | 92 | 3.44e-17 | 77.8 |
MS.gene035944.t1 | MTR_1g105920 | 43.529 | 85 | 47 | 1 | 2 | 86 | 9 | 92 | 4.27e-17 | 77.8 |
MS.gene035944.t1 | MTR_4g131030 | 53.521 | 71 | 32 | 1 | 1 | 71 | 1 | 70 | 4.62e-17 | 77.4 |
MS.gene035944.t1 | MTR_8g051580 | 50.704 | 71 | 34 | 1 | 1 | 71 | 1 | 70 | 5.08e-17 | 76.3 |
MS.gene035944.t1 | MTR_1g041615 | 54.412 | 68 | 28 | 1 | 13 | 77 | 17 | 84 | 5.25e-17 | 75.1 |
MS.gene035944.t1 | MTR_1g106070 | 41.860 | 86 | 49 | 1 | 2 | 87 | 9 | 93 | 5.41e-17 | 76.3 |
MS.gene035944.t1 | MTR_2g093190 | 44.706 | 85 | 46 | 1 | 2 | 86 | 9 | 92 | 6.60e-17 | 77.0 |
MS.gene035944.t1 | MTR_1g077360 | 52.113 | 71 | 33 | 1 | 2 | 72 | 9 | 78 | 9.37e-17 | 77.0 |
MS.gene035944.t1 | MTR_8g079502 | 30.286 | 175 | 81 | 3 | 1 | 170 | 1 | 139 | 1.06e-16 | 75.5 |
MS.gene035944.t1 | MTR_7g028448 | 48.718 | 78 | 39 | 1 | 14 | 91 | 24 | 100 | 1.08e-16 | 75.1 |
MS.gene035944.t1 | MTR_4g036915 | 48.718 | 78 | 39 | 1 | 14 | 91 | 24 | 100 | 1.08e-16 | 75.1 |
MS.gene035944.t1 | MTR_4g093970 | 57.627 | 59 | 25 | 0 | 1 | 59 | 27 | 85 | 1.59e-16 | 76.3 |
MS.gene035944.t1 | MTR_3g030780 | 40.698 | 86 | 50 | 1 | 2 | 87 | 9 | 93 | 1.77e-16 | 73.6 |
MS.gene035944.t1 | MTR_1g012570 | 49.296 | 71 | 35 | 1 | 2 | 72 | 9 | 78 | 1.97e-16 | 75.9 |
MS.gene035944.t1 | MTR_1g047550 | 35.625 | 160 | 88 | 5 | 1 | 151 | 1 | 154 | 2.98e-16 | 74.3 |
MS.gene035944.t1 | MTR_1g075600 | 43.750 | 96 | 51 | 2 | 2 | 97 | 9 | 101 | 3.78e-16 | 75.1 |
MS.gene035944.t1 | MTR_5g055100 | 46.154 | 91 | 47 | 2 | 2 | 92 | 9 | 97 | 4.31e-16 | 75.1 |
MS.gene035944.t1 | MTR_3g080940 | 46.154 | 78 | 40 | 2 | 1 | 77 | 8 | 84 | 7.91e-16 | 73.9 |
MS.gene035944.t1 | MTR_0121s0100 | 41.860 | 86 | 49 | 1 | 2 | 87 | 9 | 93 | 8.43e-16 | 72.0 |
MS.gene035944.t1 | MTR_1g063160 | 47.945 | 73 | 37 | 1 | 1 | 73 | 1 | 72 | 9.56e-16 | 72.8 |
MS.gene035944.t1 | MTR_5g053390 | 49.296 | 71 | 35 | 1 | 2 | 72 | 9 | 78 | 4.51e-15 | 72.4 |
MS.gene035944.t1 | MTR_0121s0080 | 41.176 | 85 | 49 | 1 | 2 | 86 | 9 | 92 | 5.07e-15 | 72.0 |
MS.gene035944.t1 | MTR_8g046350 | 46.479 | 71 | 37 | 1 | 1 | 71 | 1 | 70 | 1.66e-14 | 69.3 |
MS.gene035944.t1 | MTR_4g094632 | 44.444 | 72 | 39 | 1 | 1 | 72 | 1 | 71 | 4.17e-13 | 65.5 |
MS.gene035944.t1 | MTR_4g127140 | 46.988 | 83 | 43 | 1 | 1 | 83 | 11 | 92 | 1.08e-12 | 64.7 |
MS.gene035944.t1 | MTR_4g094638 | 43.056 | 72 | 40 | 1 | 1 | 72 | 1 | 71 | 2.04e-12 | 63.9 |
MS.gene035944.t1 | MTR_6g018920 | 35.294 | 85 | 48 | 1 | 1 | 78 | 1 | 85 | 2.26e-12 | 65.9 |
MS.gene035944.t1 | MTR_1g105905 | 45.161 | 62 | 33 | 1 | 11 | 72 | 1 | 61 | 3.91e-12 | 63.9 |
MS.gene035944.t1 | MTR_1g114730 | 34.118 | 85 | 49 | 1 | 1 | 78 | 1 | 85 | 2.74e-11 | 62.8 |
MS.gene035944.t1 | MTR_6g005440 | 37.662 | 77 | 41 | 1 | 1 | 70 | 1 | 77 | 4.10e-11 | 62.0 |
MS.gene035944.t1 | MTR_7g062350 | 42.029 | 69 | 39 | 1 | 18 | 86 | 37 | 104 | 4.90e-11 | 61.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene035944.t1 | AT1G22130 | 66.667 | 231 | 74 | 3 | 1 | 230 | 1 | 229 | 8.52e-106 | 309 |
MS.gene035944.t1 | AT1G77980 | 64.957 | 234 | 76 | 4 | 1 | 230 | 1 | 232 | 3.68e-101 | 297 |
MS.gene035944.t1 | AT1G77950 | 61.165 | 206 | 75 | 2 | 1 | 204 | 1 | 203 | 4.48e-87 | 258 |
MS.gene035944.t1 | AT1G77950 | 61.165 | 206 | 75 | 2 | 1 | 204 | 1 | 203 | 4.48e-87 | 258 |
MS.gene035944.t1 | AT1G77950 | 61.165 | 206 | 75 | 2 | 1 | 204 | 1 | 203 | 4.48e-87 | 258 |
MS.gene035944.t1 | AT1G77950 | 61.165 | 206 | 75 | 2 | 1 | 204 | 1 | 203 | 4.48e-87 | 258 |
MS.gene035944.t1 | AT1G18750 | 33.740 | 246 | 134 | 9 | 1 | 234 | 1 | 229 | 1.52e-30 | 116 |
MS.gene035944.t1 | AT1G18750 | 33.740 | 246 | 134 | 9 | 1 | 234 | 1 | 229 | 1.60e-30 | 116 |
MS.gene035944.t1 | AT4G09960 | 35.638 | 188 | 82 | 3 | 1 | 188 | 1 | 149 | 9.33e-28 | 105 |
MS.gene035944.t1 | AT4G37435 | 36.316 | 190 | 90 | 7 | 1 | 181 | 1 | 168 | 3.74e-27 | 103 |
MS.gene035944.t1 | AT1G18750 | 47.414 | 116 | 48 | 3 | 1 | 115 | 1 | 104 | 6.66e-27 | 107 |
MS.gene035944.t1 | AT4G09960 | 36.559 | 186 | 78 | 4 | 1 | 185 | 1 | 147 | 2.56e-26 | 102 |
MS.gene035944.t1 | AT4G09960 | 36.559 | 186 | 78 | 4 | 1 | 185 | 2 | 148 | 3.10e-26 | 102 |
MS.gene035944.t1 | AT4G09960 | 36.559 | 186 | 78 | 4 | 1 | 185 | 11 | 157 | 5.57e-26 | 101 |
MS.gene035944.t1 | AT4G09960 | 36.559 | 186 | 78 | 4 | 1 | 185 | 27 | 173 | 7.07e-26 | 101 |
MS.gene035944.t1 | AT4G09960 | 36.559 | 186 | 78 | 4 | 1 | 185 | 96 | 242 | 3.61e-25 | 101 |
MS.gene035944.t1 | AT1G69540 | 31.718 | 227 | 127 | 6 | 1 | 215 | 1 | 211 | 6.33e-25 | 100 |
MS.gene035944.t1 | AT2G03060 | 33.880 | 183 | 106 | 4 | 1 | 182 | 1 | 169 | 6.93e-25 | 101 |
MS.gene035944.t1 | AT2G03060 | 33.880 | 183 | 106 | 4 | 1 | 182 | 1 | 169 | 6.93e-25 | 101 |
MS.gene035944.t1 | AT2G03060 | 33.880 | 183 | 106 | 4 | 1 | 182 | 1 | 169 | 6.93e-25 | 101 |
MS.gene035944.t1 | AT1G69540 | 31.718 | 227 | 127 | 6 | 1 | 215 | 1 | 211 | 7.21e-25 | 101 |
MS.gene035944.t1 | AT2G03060 | 33.880 | 183 | 106 | 4 | 1 | 182 | 1 | 169 | 8.34e-25 | 101 |
MS.gene035944.t1 | AT4G11880 | 40.123 | 162 | 76 | 4 | 1 | 156 | 1 | 147 | 1.30e-23 | 94.0 |
MS.gene035944.t1 | AT4G11880 | 40.123 | 162 | 76 | 4 | 1 | 156 | 1 | 147 | 1.30e-23 | 94.0 |
MS.gene035944.t1 | AT2G45660 | 38.125 | 160 | 82 | 6 | 1 | 156 | 1 | 147 | 1.36e-23 | 93.2 |
MS.gene035944.t1 | AT2G45660 | 37.143 | 175 | 92 | 7 | 1 | 171 | 1 | 161 | 2.00e-23 | 94.4 |
MS.gene035944.t1 | AT3G58780 | 59.459 | 74 | 29 | 1 | 1 | 74 | 16 | 88 | 2.56e-23 | 94.7 |
MS.gene035944.t1 | AT4G18960 | 63.768 | 69 | 24 | 1 | 2 | 70 | 18 | 85 | 4.29e-23 | 94.4 |
MS.gene035944.t1 | AT4G11880 | 41.290 | 155 | 70 | 4 | 1 | 149 | 1 | 140 | 6.76e-23 | 93.2 |
MS.gene035944.t1 | AT4G11880 | 41.290 | 155 | 70 | 4 | 1 | 149 | 1 | 140 | 6.76e-23 | 93.2 |
MS.gene035944.t1 | AT3G58780 | 60.000 | 70 | 27 | 1 | 1 | 70 | 16 | 84 | 7.27e-23 | 93.6 |
MS.gene035944.t1 | AT2G42830 | 60.000 | 70 | 27 | 1 | 1 | 70 | 16 | 84 | 7.50e-23 | 93.6 |
MS.gene035944.t1 | AT2G42830 | 60.000 | 70 | 27 | 1 | 1 | 70 | 16 | 84 | 7.61e-23 | 93.6 |
MS.gene035944.t1 | AT3G58780 | 60.000 | 70 | 27 | 1 | 1 | 70 | 22 | 90 | 7.90e-23 | 93.6 |
MS.gene035944.t1 | AT2G45650 | 62.857 | 70 | 25 | 1 | 1 | 70 | 1 | 69 | 8.18e-23 | 93.6 |
MS.gene035944.t1 | AT3G58780 | 34.595 | 185 | 107 | 2 | 1 | 185 | 16 | 186 | 1.51e-22 | 93.2 |
MS.gene035944.t1 | AT5G15800 | 36.066 | 183 | 88 | 6 | 1 | 173 | 1 | 164 | 1.77e-22 | 92.8 |
MS.gene035944.t1 | AT5G15800 | 36.066 | 183 | 88 | 6 | 1 | 173 | 1 | 164 | 1.91e-22 | 92.8 |
MS.gene035944.t1 | AT3G58780 | 60.000 | 70 | 27 | 1 | 1 | 70 | 16 | 84 | 1.92e-22 | 93.2 |
MS.gene035944.t1 | AT5G23260 | 33.854 | 192 | 85 | 4 | 1 | 191 | 1 | 151 | 2.20e-22 | 92.4 |
MS.gene035944.t1 | AT5G13790 | 34.921 | 189 | 80 | 2 | 1 | 189 | 1 | 146 | 2.86e-22 | 92.4 |
MS.gene035944.t1 | AT5G23260 | 33.854 | 192 | 85 | 4 | 1 | 191 | 17 | 167 | 3.17e-22 | 92.4 |
MS.gene035944.t1 | AT5G10140 | 60.000 | 70 | 28 | 0 | 1 | 70 | 1 | 70 | 4.13e-22 | 89.7 |
MS.gene035944.t1 | AT3G57230 | 34.054 | 185 | 82 | 2 | 1 | 185 | 1 | 145 | 4.16e-22 | 89.0 |
MS.gene035944.t1 | AT5G10140 | 60.000 | 70 | 28 | 0 | 1 | 70 | 1 | 70 | 5.66e-22 | 89.7 |
MS.gene035944.t1 | AT5G10140 | 60.000 | 70 | 28 | 0 | 1 | 70 | 1 | 70 | 5.82e-22 | 90.1 |
MS.gene035944.t1 | AT5G13790 | 35.979 | 189 | 75 | 3 | 1 | 189 | 1 | 143 | 6.61e-22 | 91.7 |
MS.gene035944.t1 | AT4G22950 | 60.000 | 70 | 27 | 1 | 1 | 70 | 1 | 69 | 6.67e-22 | 89.4 |
MS.gene035944.t1 | AT2G03710 | 35.979 | 189 | 95 | 10 | 1 | 181 | 1 | 171 | 7.22e-22 | 89.4 |
MS.gene035944.t1 | AT5G10140 | 60.000 | 70 | 28 | 0 | 1 | 70 | 1 | 70 | 7.59e-22 | 89.4 |
MS.gene035944.t1 | AT3G57390 | 62.857 | 70 | 25 | 1 | 1 | 70 | 1 | 69 | 8.29e-22 | 90.5 |
MS.gene035944.t1 | AT1G24260 | 58.571 | 70 | 29 | 0 | 1 | 70 | 1 | 70 | 1.01e-21 | 90.5 |
MS.gene035944.t1 | AT5G23260 | 34.225 | 187 | 81 | 4 | 1 | 186 | 17 | 162 | 1.12e-21 | 90.9 |
MS.gene035944.t1 | AT5G23260 | 56.471 | 85 | 31 | 2 | 1 | 79 | 1 | 85 | 1.20e-21 | 90.1 |
MS.gene035944.t1 | AT1G24260 | 58.571 | 70 | 29 | 0 | 1 | 70 | 1 | 70 | 1.37e-21 | 90.1 |
MS.gene035944.t1 | AT1G24260 | 58.571 | 70 | 29 | 0 | 1 | 70 | 1 | 70 | 1.45e-21 | 90.1 |
MS.gene035944.t1 | AT3G57390 | 62.857 | 70 | 25 | 1 | 1 | 70 | 1 | 69 | 1.48e-21 | 90.1 |
MS.gene035944.t1 | AT3G02310 | 34.694 | 196 | 98 | 7 | 1 | 186 | 1 | 176 | 1.53e-21 | 89.0 |
MS.gene035944.t1 | AT2G03710 | 35.676 | 185 | 101 | 9 | 1 | 181 | 1 | 171 | 1.81e-21 | 90.1 |
MS.gene035944.t1 | AT2G03710 | 35.676 | 185 | 101 | 9 | 1 | 181 | 1 | 171 | 1.93e-21 | 90.1 |
MS.gene035944.t1 | AT5G51870 | 32.804 | 189 | 89 | 3 | 1 | 189 | 1 | 151 | 2.42e-21 | 88.6 |
MS.gene035944.t1 | AT4G22950 | 60.000 | 70 | 27 | 1 | 1 | 70 | 1 | 69 | 2.44e-21 | 89.0 |
MS.gene035944.t1 | AT4G22950 | 60.000 | 70 | 27 | 1 | 1 | 70 | 1 | 69 | 2.44e-21 | 89.0 |
MS.gene035944.t1 | AT3G02310 | 57.143 | 70 | 30 | 0 | 1 | 70 | 1 | 70 | 2.98e-21 | 89.4 |
MS.gene035944.t1 | AT5G65070 | 58.571 | 70 | 29 | 0 | 1 | 70 | 1 | 70 | 3.46e-21 | 86.7 |
MS.gene035944.t1 | AT5G60910 | 55.714 | 70 | 31 | 0 | 1 | 70 | 1 | 70 | 4.94e-21 | 88.6 |
MS.gene035944.t1 | AT5G62165 | 67.241 | 58 | 19 | 0 | 1 | 58 | 1 | 58 | 5.46e-21 | 86.3 |
MS.gene035944.t1 | AT5G62165 | 67.241 | 58 | 19 | 0 | 1 | 58 | 1 | 58 | 5.46e-21 | 86.3 |
MS.gene035944.t1 | AT5G62165 | 67.241 | 58 | 19 | 0 | 1 | 58 | 1 | 58 | 5.46e-21 | 86.3 |
MS.gene035944.t1 | AT5G65070 | 58.571 | 70 | 29 | 0 | 1 | 70 | 1 | 70 | 5.62e-21 | 87.4 |
MS.gene035944.t1 | AT1G26310 | 57.143 | 70 | 30 | 0 | 1 | 70 | 1 | 70 | 5.86e-21 | 88.6 |
MS.gene035944.t1 | AT5G51870 | 46.847 | 111 | 44 | 4 | 1 | 111 | 1 | 96 | 5.96e-21 | 86.7 |
MS.gene035944.t1 | AT5G62165 | 67.241 | 58 | 19 | 0 | 1 | 58 | 1 | 58 | 6.61e-21 | 84.7 |
MS.gene035944.t1 | AT1G69120 | 32.432 | 185 | 87 | 2 | 1 | 185 | 1 | 147 | 6.79e-21 | 88.2 |
MS.gene035944.t1 | AT3G30260 | 54.286 | 70 | 32 | 0 | 1 | 70 | 1 | 70 | 7.05e-21 | 88.2 |
MS.gene035944.t1 | AT5G51870 | 32.804 | 189 | 89 | 3 | 1 | 189 | 1 | 151 | 8.43e-21 | 87.4 |
MS.gene035944.t1 | AT5G62165 | 67.241 | 58 | 19 | 0 | 1 | 58 | 1 | 58 | 8.74e-21 | 85.9 |
MS.gene035944.t1 | AT5G62165 | 67.241 | 58 | 19 | 0 | 1 | 58 | 1 | 58 | 8.74e-21 | 85.9 |
MS.gene035944.t1 | AT5G62165 | 67.241 | 58 | 19 | 0 | 1 | 58 | 1 | 58 | 8.74e-21 | 85.9 |
MS.gene035944.t1 | AT5G62165 | 67.241 | 58 | 19 | 0 | 1 | 58 | 1 | 58 | 8.74e-21 | 85.9 |
MS.gene035944.t1 | AT5G62165 | 67.241 | 58 | 19 | 0 | 1 | 58 | 1 | 58 | 8.74e-21 | 85.9 |
MS.gene035944.t1 | AT5G51870 | 32.804 | 189 | 89 | 3 | 1 | 189 | 11 | 161 | 9.25e-21 | 87.4 |
MS.gene035944.t1 | AT3G61120 | 52.500 | 80 | 37 | 1 | 1 | 80 | 1 | 79 | 1.04e-20 | 87.8 |
MS.gene035944.t1 | AT3G57230 | 58.571 | 70 | 28 | 1 | 1 | 70 | 1 | 69 | 1.09e-20 | 87.8 |
MS.gene035944.t1 | AT3G57230 | 58.571 | 70 | 28 | 1 | 1 | 70 | 1 | 69 | 1.09e-20 | 87.8 |
MS.gene035944.t1 | AT1G69120 | 32.432 | 185 | 87 | 2 | 1 | 185 | 1 | 147 | 1.38e-20 | 87.8 |
MS.gene035944.t1 | AT4G24540 | 58.571 | 70 | 28 | 1 | 1 | 70 | 1 | 69 | 1.49e-20 | 86.7 |
MS.gene035944.t1 | AT5G51870 | 46.847 | 111 | 44 | 4 | 1 | 111 | 24 | 119 | 1.51e-20 | 86.3 |
MS.gene035944.t1 | AT5G65070 | 58.571 | 70 | 29 | 0 | 1 | 70 | 1 | 70 | 1.79e-20 | 86.3 |
MS.gene035944.t1 | AT5G65070 | 58.571 | 70 | 29 | 0 | 1 | 70 | 1 | 70 | 1.87e-20 | 86.7 |
MS.gene035944.t1 | AT5G62165 | 32.275 | 189 | 89 | 4 | 1 | 189 | 1 | 150 | 2.69e-20 | 85.9 |
MS.gene035944.t1 | AT5G62165 | 32.275 | 189 | 89 | 4 | 1 | 189 | 1 | 150 | 2.69e-20 | 85.9 |
MS.gene035944.t1 | AT5G62165 | 32.275 | 189 | 89 | 4 | 1 | 189 | 1 | 150 | 2.69e-20 | 85.9 |
MS.gene035944.t1 | AT5G62165 | 58.571 | 70 | 28 | 1 | 1 | 70 | 1 | 69 | 3.08e-20 | 85.5 |
MS.gene035944.t1 | AT5G62165 | 58.571 | 70 | 28 | 1 | 1 | 70 | 1 | 69 | 3.08e-20 | 85.5 |
MS.gene035944.t1 | AT4G37940 | 34.392 | 189 | 84 | 5 | 1 | 189 | 1 | 149 | 3.29e-20 | 86.3 |
MS.gene035944.t1 | AT3G54340 | 64.912 | 57 | 20 | 0 | 1 | 57 | 1 | 57 | 5.09e-20 | 85.5 |
MS.gene035944.t1 | AT4G37940 | 32.663 | 199 | 90 | 6 | 1 | 199 | 1 | 155 | 5.50e-20 | 84.3 |
MS.gene035944.t1 | AT5G65070 | 58.442 | 77 | 28 | 2 | 1 | 73 | 1 | 77 | 1.40e-19 | 84.3 |
MS.gene035944.t1 | AT1G71692 | 44.444 | 81 | 45 | 0 | 1 | 81 | 1 | 81 | 2.44e-19 | 83.6 |
MS.gene035944.t1 | AT2G14210 | 51.429 | 70 | 34 | 0 | 1 | 70 | 1 | 70 | 2.73e-19 | 83.6 |
MS.gene035944.t1 | AT2G14210 | 51.429 | 70 | 34 | 0 | 1 | 70 | 1 | 70 | 3.35e-19 | 83.6 |
MS.gene035944.t1 | AT4G37940 | 33.511 | 188 | 85 | 5 | 1 | 188 | 1 | 148 | 5.29e-19 | 82.4 |
MS.gene035944.t1 | AT5G65050 | 54.286 | 70 | 32 | 0 | 1 | 70 | 1 | 70 | 1.09e-18 | 80.9 |
MS.gene035944.t1 | AT5G51860 | 46.316 | 95 | 49 | 2 | 1 | 95 | 1 | 93 | 1.29e-18 | 81.3 |
MS.gene035944.t1 | AT2G22540 | 35.260 | 173 | 84 | 6 | 1 | 164 | 1 | 154 | 1.31e-18 | 82.0 |
MS.gene035944.t1 | AT2G22540 | 35.260 | 173 | 84 | 6 | 1 | 164 | 1 | 154 | 1.31e-18 | 82.0 |
MS.gene035944.t1 | AT5G51860 | 46.316 | 95 | 49 | 2 | 1 | 95 | 1 | 93 | 1.36e-18 | 81.3 |
MS.gene035944.t1 | AT5G20240 | 62.963 | 54 | 20 | 0 | 1 | 54 | 1 | 54 | 2.03e-18 | 79.3 |
MS.gene035944.t1 | AT5G65050 | 54.286 | 70 | 32 | 0 | 1 | 70 | 1 | 70 | 3.10e-18 | 79.7 |
MS.gene035944.t1 | AT5G65050 | 54.286 | 70 | 32 | 0 | 1 | 70 | 1 | 70 | 3.20e-18 | 79.7 |
MS.gene035944.t1 | AT5G65050 | 54.286 | 70 | 32 | 0 | 1 | 70 | 1 | 70 | 3.23e-18 | 80.1 |
MS.gene035944.t1 | AT5G20240 | 58.621 | 58 | 24 | 0 | 1 | 58 | 1 | 58 | 4.59e-18 | 79.7 |
MS.gene035944.t1 | AT2G22630 | 30.159 | 189 | 92 | 4 | 1 | 189 | 1 | 149 | 1.11e-17 | 79.3 |
MS.gene035944.t1 | AT2G22630 | 30.159 | 189 | 92 | 4 | 1 | 189 | 1 | 149 | 1.11e-17 | 79.3 |
MS.gene035944.t1 | AT1G31140 | 40.741 | 108 | 63 | 1 | 1 | 107 | 1 | 108 | 1.11e-17 | 79.0 |
MS.gene035944.t1 | AT2G22540 | 62.963 | 54 | 20 | 0 | 1 | 54 | 1 | 54 | 1.66e-17 | 79.0 |
MS.gene035944.t1 | AT5G65060 | 35.838 | 173 | 92 | 7 | 1 | 172 | 1 | 155 | 4.05e-17 | 77.0 |
MS.gene035944.t1 | AT5G65060 | 35.838 | 173 | 92 | 7 | 1 | 172 | 1 | 155 | 4.38e-17 | 77.0 |
MS.gene035944.t1 | AT5G65060 | 52.857 | 70 | 33 | 0 | 1 | 70 | 1 | 70 | 4.90e-17 | 76.6 |
MS.gene035944.t1 | AT5G65080 | 50.000 | 70 | 35 | 0 | 1 | 70 | 8 | 77 | 1.77e-16 | 75.1 |
MS.gene035944.t1 | AT1G31140 | 40.741 | 108 | 61 | 2 | 1 | 107 | 1 | 106 | 1.98e-16 | 75.5 |
MS.gene035944.t1 | AT5G60440 | 43.902 | 82 | 42 | 2 | 2 | 80 | 7 | 87 | 1.47e-15 | 74.7 |
MS.gene035944.t1 | AT2G26320 | 46.250 | 80 | 42 | 1 | 1 | 79 | 17 | 96 | 1.50e-15 | 70.5 |
MS.gene035944.t1 | AT5G65080 | 53.968 | 63 | 29 | 0 | 1 | 63 | 8 | 70 | 3.22e-15 | 72.0 |
MS.gene035944.t1 | AT1G77080 | 55.714 | 70 | 31 | 0 | 1 | 70 | 1 | 70 | 1.22e-14 | 70.1 |
MS.gene035944.t1 | AT1G77080 | 55.714 | 70 | 31 | 0 | 1 | 70 | 1 | 70 | 1.58e-14 | 69.7 |
MS.gene035944.t1 | AT3G66656 | 43.056 | 72 | 40 | 1 | 1 | 72 | 1 | 71 | 1.69e-14 | 69.7 |
MS.gene035944.t1 | AT1G01530 | 41.237 | 97 | 48 | 2 | 1 | 94 | 6 | 96 | 1.72e-14 | 70.9 |
MS.gene035944.t1 | AT2G24840 | 47.222 | 72 | 37 | 1 | 1 | 72 | 62 | 132 | 1.88e-14 | 71.2 |
MS.gene035944.t1 | AT1G77080 | 55.714 | 70 | 31 | 0 | 1 | 70 | 1 | 70 | 2.11e-14 | 69.7 |
MS.gene035944.t1 | AT1G77080 | 55.714 | 70 | 31 | 0 | 1 | 70 | 1 | 70 | 5.63e-14 | 68.9 |
MS.gene035944.t1 | AT1G47760 | 47.222 | 72 | 37 | 1 | 1 | 72 | 1 | 71 | 9.42e-14 | 67.8 |
MS.gene035944.t1 | AT1G77080 | 77.500 | 40 | 9 | 0 | 1 | 40 | 1 | 40 | 1.00e-13 | 67.0 |
MS.gene035944.t1 | AT4G36590 | 47.887 | 71 | 36 | 1 | 2 | 72 | 7 | 76 | 1.82e-13 | 68.2 |
MS.gene035944.t1 | AT1G77080 | 77.500 | 40 | 9 | 0 | 1 | 40 | 1 | 40 | 2.17e-13 | 67.0 |
MS.gene035944.t1 | AT1G72350 | 48.571 | 70 | 33 | 1 | 2 | 71 | 43 | 109 | 2.48e-13 | 67.4 |
MS.gene035944.t1 | AT2G34440 | 40.845 | 71 | 41 | 1 | 1 | 71 | 1 | 70 | 3.14e-13 | 66.2 |
MS.gene035944.t1 | AT1G65360 | 44.286 | 70 | 38 | 1 | 1 | 70 | 6 | 74 | 1.07e-12 | 65.5 |
MS.gene035944.t1 | AT1G28460 | 43.662 | 71 | 39 | 1 | 2 | 72 | 8 | 77 | 8.31e-11 | 59.7 |
Find 41 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCAATAGATGTCATCTTTAA+TGG | 0.180149 | 5.3:+48736687 | None:intergenic |
GAACATACTTATCTCTTTCT+TGG | 0.254516 | 5.3:+48739199 | None:intergenic |
TAGTATTCAGTCTAGTATTC+AGG | 0.359026 | 5.3:-48736267 | MS.gene035944:intron |
GTAATCTACAAACTTCTTGT+TGG | 0.390980 | 5.3:+48736856 | None:intergenic |
TACTTATCTCTTTCTTGGTC+AGG | 0.394970 | 5.3:+48739204 | None:intergenic |
CAATAGATGTCATCTTTAAT+GGG | 0.418885 | 5.3:+48736688 | None:intergenic |
GATGTCATCTTTAATGGGTC+GGG | 0.422699 | 5.3:+48736693 | None:intergenic |
AAATGACTAAGACGATTTGA+TGG | 0.423614 | 5.3:+48740104 | None:intergenic |
ATACTAGACTGAATACTAGA+TGG | 0.449803 | 5.3:+48736272 | None:intergenic |
CGAGAATGTAGGTTGGCTAC+AGG | 0.457387 | 5.3:-48735963 | MS.gene035944:CDS |
TTACGAACTTGGACATATGA+AGG | 0.461140 | 5.3:+48738479 | None:intergenic |
ACGTTCTCAAAACGTAGAAA+TGG | 0.470359 | 5.3:-48740194 | MS.gene035944:CDS |
ATTACAACAACAACTTCAAA+TGG | 0.471368 | 5.3:-48736838 | MS.gene035944:CDS |
GTCACGTGTCATGCAGAGAA+AGG | 0.473782 | 5.3:-48736625 | MS.gene035944:intron |
CAGCTCCTATGGATCCTCTC+AGG | 0.486930 | 5.3:-48735901 | None:intergenic |
ATCAATCATCAACATGGGTC+GGG | 0.488887 | 5.3:-48740264 | None:intergenic |
ATCTCAGAGTTAATGTCTCC+CGG | 0.500348 | 5.3:+48738333 | None:intergenic |
TACCTGCGGTAGGGTGGCTC+AGG | 0.504256 | 5.3:+48739059 | None:intergenic |
AGATGTCATCTTTAATGGGT+CGG | 0.511069 | 5.3:+48736692 | None:intergenic |
ATGGATCATACGAAGATAGT+TGG | 0.517612 | 5.3:+48736291 | None:intergenic |
AATCAATCATCAACATGGGT+CGG | 0.531556 | 5.3:-48740265 | None:intergenic |
TTCCTGAGCCACCCTACCGC+AGG | 0.550290 | 5.3:-48739061 | MS.gene035944:intron |
TACGAACTTGGACATATGAA+GGG | 0.558360 | 5.3:+48738480 | None:intergenic |
CAAAACCTGAGAGGATCCAT+AGG | 0.561333 | 5.3:+48735896 | None:intergenic |
TTCCAGGGGTATTCAGAACA+AGG | 0.570196 | 5.3:-48738889 | MS.gene035944:intron |
CCAACCTACATTCTCGAAAG+TGG | 0.572195 | 5.3:+48735970 | None:intergenic |
AGACATTAACTCTGAGATTG+AGG | 0.572259 | 5.3:-48738328 | MS.gene035944:intron |
CCCACCACTTTCGAGAATGT+AGG | 0.580248 | 5.3:-48735974 | MS.gene035944:CDS |
TCTCTGCATGACACGTGACA+AGG | 0.584435 | 5.3:+48736629 | None:intergenic |
ACCTACATTCTCGAAAGTGG+TGG | 0.588015 | 5.3:+48735973 | None:intergenic |
CCTGAGAGTATACCTGCGGT+AGG | 0.592886 | 5.3:+48739049 | None:intergenic |
GTAGGTTGGCTACAGGATAG+TGG | 0.593145 | 5.3:-48735956 | MS.gene035944:CDS |
AAATGGCAGAGGAACAGATA+AGG | 0.606878 | 5.3:-48736821 | MS.gene035944:intron |
AGAGTATACCTGCGGTAGGG+TGG | 0.617720 | 5.3:+48739053 | None:intergenic |
CTGAGAGTATACCTGCGGTA+GGG | 0.626141 | 5.3:+48739050 | None:intergenic |
CCACTTTCGAGAATGTAGGT+TGG | 0.629367 | 5.3:-48735970 | MS.gene035944:CDS |
CCTACATTCTCGAAAGTGGT+GGG | 0.637121 | 5.3:+48735974 | None:intergenic |
ACAACAACTTCAAATGGCAG+AGG | 0.638306 | 5.3:-48736832 | MS.gene035944:CDS |
GAGCAATATCAATATCACAA+AGG | 0.664332 | 5.3:+48740141 | None:intergenic |
TGAAGAAATCAAAACCTGAG+AGG | 0.684872 | 5.3:+48735887 | None:intergenic |
CAGGGGTATTCAGAACAAGG+AGG | 0.723829 | 5.3:-48738886 | MS.gene035944:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAAAATAAAATAAAATAAA+AGG | + | chr5.3:48736771-48736790 | None:intergenic | 0.0% |
!! | AAAAAAAATTAGAAAAACTT+TGG | + | chr5.3:48739387-48739406 | None:intergenic | 10.0% |
!! | AAAATTAGTATATATATTTC+AGG | - | chr5.3:48737316-48737335 | MS.gene035944:intron | 10.0% |
!! | AATAATAACAATATCATTAT+GGG | + | chr5.3:48736884-48736903 | None:intergenic | 10.0% |
!! | AATTGCATAAAATTATTAAA+TGG | + | chr5.3:48740010-48740029 | None:intergenic | 10.0% |
!! | ACTATATAAATATAAAAAAG+AGG | - | chr5.3:48737938-48737957 | MS.gene035944:intron | 10.0% |
!! | CTATATAAATATAAAAAAGA+GGG | - | chr5.3:48737939-48737958 | MS.gene035944:intron | 10.0% |
!! | TACATGATTAATTAATAATT+AGG | + | chr5.3:48739208-48739227 | None:intergenic | 10.0% |
!!! | AATTAAAACAATCTTTTTTT+TGG | + | chr5.3:48739171-48739190 | None:intergenic | 10.0% |
!!! | TATTTTTCTTTCTTAAAATA+AGG | - | chr5.3:48736507-48736526 | MS.gene035944:intron | 10.0% |
!!! | TTTATTTATTTTTGTTCTTT+TGG | + | chr5.3:48736462-48736481 | None:intergenic | 10.0% |
!! | AATTAAAATCACAAAAATCA+TGG | - | chr5.3:48740147-48740166 | MS.gene035944:CDS | 15.0% |
!! | CAATAATAACAATATCATTA+TGG | + | chr5.3:48736885-48736904 | None:intergenic | 15.0% |
!! | TAAAATTATTAAATGGTGTA+AGG | + | chr5.3:48740003-48740022 | None:intergenic | 15.0% |
!! | TTAATAATATATAGCTTGAA+AGG | + | chr5.3:48737465-48737484 | None:intergenic | 15.0% |
!!! | ATAAAATTGATAGCTAATTT+GGG | + | chr5.3:48739980-48739999 | None:intergenic | 15.0% |
!!! | ATCGATTTATAATAGAATTT+TGG | - | chr5.3:48737721-48737740 | MS.gene035944:intron | 15.0% |
!!! | CATTAAATTTTCTTTTAACT+AGG | - | chr5.3:48739270-48739289 | MS.gene035944:intron | 15.0% |
!!! | CTTTTTTTTTTAGGAATATT+TGG | - | chr5.3:48736815-48736834 | MS.gene035944:intron | 15.0% |
!!! | TAATGATATTGTTATTATTG+TGG | - | chr5.3:48736885-48736904 | MS.gene035944:intron | 15.0% |
!!! | TATAATTGATGATTATATAC+TGG | - | chr5.3:48736843-48736862 | MS.gene035944:CDS | 15.0% |
!!! | TCGATTTATAATAGAATTTT+GGG | - | chr5.3:48737722-48737741 | MS.gene035944:intron | 15.0% |
!!! | TGATTTTATTTACATAGTTT+GGG | - | chr5.3:48739002-48739021 | MS.gene035944:intron | 15.0% |
!!! | TTAATTCAACTTTTTGTTTT+GGG | - | chr5.3:48738419-48738438 | MS.gene035944:intron | 15.0% |
!!! | TTGATTTTATTTACATAGTT+TGG | - | chr5.3:48739001-48739020 | MS.gene035944:intron | 15.0% |
!!! | TTTAATTCAACTTTTTGTTT+TGG | - | chr5.3:48738418-48738437 | MS.gene035944:intron | 15.0% |
!!! | TTTTTATTCATTTATTTCCA+GGG | - | chr5.3:48737249-48737268 | MS.gene035944:intron | 15.0% |
!!! | TTTTTTATGGTGTTTATTTT+GGG | - | chr5.3:48738729-48738748 | MS.gene035944:intron | 15.0% |
!! | AAACATAAATCATATCAGAA+AGG | + | chr5.3:48738186-48738205 | None:intergenic | 20.0% |
!! | AAATTTAATGATCATGAGAA+AGG | + | chr5.3:48739260-48739279 | None:intergenic | 20.0% |
!! | AATAAACTACCAAGAAAAAT+TGG | - | chr5.3:48737506-48737525 | MS.gene035944:intron | 20.0% |
!! | ATTAGTATATATATTTCAGG+AGG | - | chr5.3:48737319-48737338 | MS.gene035944:intron | 20.0% |
!! | CATTCATATTTGTAAATGTT+AGG | + | chr5.3:48737570-48737589 | None:intergenic | 20.0% |
!! | TATGTTAGTGTATAAATTGA+TGG | - | chr5.3:48738956-48738975 | MS.gene035944:intron | 20.0% |
!! | TCTATAAGAATCAATTTACT+GGG | + | chr5.3:48737164-48737183 | None:intergenic | 20.0% |
!! | TGTAATTATATATGTCGTAT+TGG | - | chr5.3:48739697-48739716 | MS.gene035944:intron | 20.0% |
!! | TTCTATAAGAATCAATTTAC+TGG | + | chr5.3:48737165-48737184 | None:intergenic | 20.0% |
!!! | AGACAATTTTAAAACAATCT+AGG | + | chr5.3:48739116-48739135 | None:intergenic | 20.0% |
!!! | ATAAACTGATTTTAACCTTT+GGG | - | chr5.3:48736643-48736662 | MS.gene035944:CDS | 20.0% |
!!! | ATTTGGAGTCTTTTTTTTTT+AGG | - | chr5.3:48736806-48736825 | MS.gene035944:intron | 20.0% |
!!! | CGATTTTCTTAAATTATTAG+TGG | + | chr5.3:48739667-48739686 | None:intergenic | 20.0% |
!!! | CTTTTTATTCATTTATTTCC+AGG | - | chr5.3:48737248-48737267 | MS.gene035944:intron | 20.0% |
!!! | GATAAAATTGATAGCTAATT+TGG | + | chr5.3:48739981-48740000 | None:intergenic | 20.0% |
!!! | GATTTTATTTACATAGTTTG+GGG | - | chr5.3:48739003-48739022 | MS.gene035944:intron | 20.0% |
!!! | GTTTTTTATGGTGTTTATTT+TGG | - | chr5.3:48738728-48738747 | MS.gene035944:intron | 20.0% |
!!! | TAAAACAATCTTTTTTTTGG+TGG | + | chr5.3:48739168-48739187 | None:intergenic | 20.0% |
!!! | TATAAACTGATTTTAACCTT+TGG | - | chr5.3:48736642-48736661 | MS.gene035944:CDS | 20.0% |
!!! | TGGTAGAATTTCAAATATTT+TGG | - | chr5.3:48736698-48736717 | MS.gene035944:CDS | 20.0% |
!!! | TTTTATTCATTTATTTCCAG+GGG | - | chr5.3:48737250-48737269 | MS.gene035944:intron | 20.0% |
!!! | TTTTGGTAGAAATATGTTAA+TGG | - | chr5.3:48736715-48736734 | MS.gene035944:intron | 20.0% |
! | AAATCATATCAGAAAGGAAA+AGG | + | chr5.3:48738180-48738199 | None:intergenic | 25.0% |
! | AACATTAGAACAATTATTGG+AGG | + | chr5.3:48739411-48739430 | None:intergenic | 25.0% |
! | ACTCTGAATTTGTATGTTTA+TGG | - | chr5.3:48736666-48736685 | MS.gene035944:CDS | 25.0% |
! | ATTACAACAACAACTTCAAA+TGG | - | chr5.3:48739315-48739334 | MS.gene035944:intron | 25.0% |
! | CAATAATTGTTCTAATGTTG+TGG | - | chr5.3:48739412-48739431 | MS.gene035944:intron | 25.0% |
! | CAATAGATGTCATCTTTAAT+GGG | + | chr5.3:48739468-48739487 | None:intergenic | 25.0% |
! | CACAACATTAGAACAATTAT+TGG | + | chr5.3:48739414-48739433 | None:intergenic | 25.0% |
! | CATCAAAAATATTATGCGAA+TGG | + | chr5.3:48740229-48740248 | None:intergenic | 25.0% |
! | CTGAATTGTCAAATTTCTTA+AGG | + | chr5.3:48738901-48738920 | None:intergenic | 25.0% |
! | TAAACAATTGAGTTATAGTG+TGG | - | chr5.3:48736600-48736619 | MS.gene035944:intron | 25.0% |
! | TAAATATAAAAAAGAGGGTG+TGG | - | chr5.3:48737944-48737963 | MS.gene035944:intron | 25.0% |
! | TGTAAACTTCTAAACACATT+TGG | - | chr5.3:48737018-48737037 | MS.gene035944:intron | 25.0% |
! | TTGAAATTCTACCAAAGAAA+AGG | + | chr5.3:48736692-48736711 | None:intergenic | 25.0% |
! | TTTATGCCATTAAGATGTTA+GGG | - | chr5.3:48738921-48738940 | MS.gene035944:intron | 25.0% |
!! | TTCATATGTTGCAATTTTCT+TGG | - | chr5.3:48739778-48739797 | MS.gene035944:intron | 25.0% |
!! | TTGTTATTATTGTGGTAATC+AGG | - | chr5.3:48736893-48736912 | MS.gene035944:intron | 25.0% |
!! | TTTTATGCTCCAATTTTTCT+TGG | + | chr5.3:48737518-48737537 | None:intergenic | 25.0% |
!!! | AATTTACAAAAGAGTGTTAG+AGG | - | chr5.3:48739954-48739973 | MS.gene035944:intron | 25.0% |
!!! | ATTTTTCAATCTATGAAGCA+CGG | - | chr5.3:48739603-48739622 | MS.gene035944:intron | 25.0% |
!!! | CTCATGCAATTTTTTTTTCA+TGG | - | chr5.3:48736539-48736558 | MS.gene035944:intron | 25.0% |
!!! | TGTGTTCTTTTTTTTCCTAT+GGG | - | chr5.3:48736342-48736361 | MS.gene035944:intron | 25.0% |
AAAATCACAAAAATCATGGC+AGG | - | chr5.3:48740151-48740170 | MS.gene035944:CDS | 30.0% | |
AAATCACAAAAATCATGGCA+GGG | - | chr5.3:48740152-48740171 | MS.gene035944:CDS | 30.0% | |
AAATGACTAAGACGATTTGA+TGG | + | chr5.3:48736052-48736071 | None:intergenic | 30.0% | |
AAATTGCAACATATGAAGCA+TGG | + | chr5.3:48739775-48739794 | None:intergenic | 30.0% | |
AAGACAATCAACATGATGTA+AGG | + | chr5.3:48738215-48738234 | None:intergenic | 30.0% | |
AATCAGATACTACAAACTAC+AGG | + | chr5.3:48738775-48738794 | None:intergenic | 30.0% | |
ATAAAAATTGCAGTATGCCA+TGG | + | chr5.3:48737864-48737883 | None:intergenic | 30.0% | |
GAACATACTTATCTCTTTCT+TGG | + | chr5.3:48736957-48736976 | None:intergenic | 30.0% | |
GAGCAATATCAATATCACAA+AGG | + | chr5.3:48736015-48736034 | None:intergenic | 30.0% | |
GATTAGCATATTTACGAACT+TGG | + | chr5.3:48737688-48737707 | None:intergenic | 30.0% | |
GCAATAGATGTCATCTTTAA+TGG | + | chr5.3:48739469-48739488 | None:intergenic | 30.0% | |
GGCTATTTATGATGTTCTTT+CGG | - | chr5.3:48738440-48738459 | MS.gene035944:intron | 30.0% | |
GTAATCTACAAACTTCTTGT+TGG | + | chr5.3:48739300-48739319 | None:intergenic | 30.0% | |
GTTTATGCCATTAAGATGTT+AGG | - | chr5.3:48738920-48738939 | MS.gene035944:intron | 30.0% | |
TAAAAACATGCATGTACTCA+TGG | - | chr5.3:48739816-48739835 | MS.gene035944:intron | 30.0% | |
TAAATCGATAAAGAGTTCAG+AGG | + | chr5.3:48737710-48737729 | None:intergenic | 30.0% | |
TAATTGTTCTAATGTTGTGG+TGG | - | chr5.3:48739415-48739434 | MS.gene035944:intron | 30.0% | |
TATATTTGATAGAGCTAGCT+TGG | + | chr5.3:48737438-48737457 | None:intergenic | 30.0% | |
TCAATTTACTGGGAAAACAA+AGG | + | chr5.3:48737154-48737173 | None:intergenic | 30.0% | |
TCTAGATTCAAATTTGTCGT+CGG | - | chr5.3:48737977-48737996 | MS.gene035944:intron | 30.0% | |
TTTGGGGATTAAATTGAAGA+GGG | - | chr5.3:48739019-48739038 | MS.gene035944:intron | 30.0% | |
! | CATTTTGTGTGAGTTATGTA+TGG | - | chr5.3:48736991-48737010 | MS.gene035944:intron | 30.0% |
! | GCATTTTACAGTATTTTCTC+AGG | - | chr5.3:48737616-48737635 | MS.gene035944:intron | 30.0% |
! | GTAATAATTTGTGACTCGTA+AGG | - | chr5.3:48736282-48736301 | MS.gene035944:CDS | 30.0% |
! | TAATTTTCAAAAGCCAGCAA+TGG | + | chr5.3:48736412-48736431 | None:intergenic | 30.0% |
! | TATGTTTATGGCCTTTTCTT+TGG | - | chr5.3:48736678-48736697 | MS.gene035944:CDS | 30.0% |
! | TGGTTGATGTTATTTAGGTA+GGG | - | chr5.3:48738034-48738053 | MS.gene035944:intron | 30.0% |
! | TTGTTTGTGCAAATTTTGTG+TGG | - | chr5.3:48736103-48736122 | MS.gene035944:intron | 30.0% |
! | TTTACGACATAGTCTGATTT+TGG | - | chr5.3:48738628-48738647 | MS.gene035944:intron | 30.0% |
!! | AGTTGTATGAGTATTGGATT+AGG | - | chr5.3:48738489-48738508 | MS.gene035944:CDS | 30.0% |
!! | GGTTATGAATTCGTTTTTAG+TGG | - | chr5.3:48738602-48738621 | MS.gene035944:intron | 30.0% |
!!! | AATCGTCTTAGTCATTTTTC+TGG | - | chr5.3:48736055-48736074 | MS.gene035944:intron | 30.0% |
!!! | ATCGTCTTAGTCATTTTTCT+GGG | - | chr5.3:48736056-48736075 | MS.gene035944:intron | 30.0% |
!!! | GAATCCTCTTACTTTTTCTT+CGG | - | chr5.3:48737126-48737145 | MS.gene035944:intron | 30.0% |
!!! | GATTAGGACTTTTTTGAATG+TGG | - | chr5.3:48738505-48738524 | MS.gene035944:CDS | 30.0% |
!!! | GTGTGTATGAGTGTTTTTTA+TGG | - | chr5.3:48738716-48738735 | MS.gene035944:intron | 30.0% |
!!! | GTGTGTTCTTTTTTTTCCTA+TGG | - | chr5.3:48736341-48736360 | MS.gene035944:intron | 30.0% |
!!! | TCTTTTTTTTCCTATGGGTT+AGG | - | chr5.3:48736347-48736366 | MS.gene035944:intron | 30.0% |
!!! | TTCTACTACGTTTTTTTCAC+TGG | + | chr5.3:48739503-48739522 | None:intergenic | 30.0% |
AAATATTCCACCGTAACAAC+TGG | + | chr5.3:48736380-48736399 | None:intergenic | 35.0% | |
ACAATCAACATGATGTAAGG+TGG | + | chr5.3:48738212-48738231 | None:intergenic | 35.0% | |
ACGTTCTCAAAACGTAGAAA+TGG | - | chr5.3:48735959-48735978 | MS.gene035944:CDS | 35.0% | |
ATACAAATTCAGAGTCCCAA+AGG | + | chr5.3:48736661-48736680 | None:intergenic | 35.0% | |
ATGGATCATACGAAGATAGT+TGG | + | chr5.3:48739865-48739884 | None:intergenic | 35.0% | |
ATTCAGCCCTAACATCTTAA+TGG | + | chr5.3:48738930-48738949 | None:intergenic | 35.0% | |
ATTTATGTTCGTCTTGAGCA+GGG | - | chr5.3:48738800-48738819 | MS.gene035944:intron | 35.0% | |
GATCTCGAAGCAAAATTAAC+CGG | + | chr5.3:48738258-48738277 | None:intergenic | 35.0% | |
GCAGCTAGTATATTTGAAGA+AGG | + | chr5.3:48736749-48736768 | None:intergenic | 35.0% | |
GTTTGGGGATTAAATTGAAG+AGG | - | chr5.3:48739018-48739037 | MS.gene035944:intron | 35.0% | |
TACGAACTTGGACATATGAA+GGG | + | chr5.3:48737676-48737695 | None:intergenic | 35.0% | |
TACTTATCTCTTTCTTGGTC+AGG | + | chr5.3:48736952-48736971 | None:intergenic | 35.0% | |
TAGTTTAGGGACAAAATCGA+TGG | + | chr5.3:48737922-48737941 | None:intergenic | 35.0% | |
TATGCCTCTTCTCTTCTTAA+TGG | - | chr5.3:48736160-48736179 | MS.gene035944:intron | 35.0% | |
TCAACCATTAAGAAGAGAAG+AGG | + | chr5.3:48736167-48736186 | None:intergenic | 35.0% | |
TGCTCAAGACGAACATAAAT+CGG | + | chr5.3:48738800-48738819 | None:intergenic | 35.0% | |
TGTCTTCTTTGATAGATCGA+GGG | - | chr5.3:48738320-48738339 | MS.gene035944:intron | 35.0% | |
TTACGAACTTGGACATATGA+AGG | + | chr5.3:48737677-48737696 | None:intergenic | 35.0% | |
TTGTCTTCATGTTTGTATCC+TGG | - | chr5.3:48738228-48738247 | MS.gene035944:intron | 35.0% | |
TTTGTGTGAGTTATGTATGG+TGG | - | chr5.3:48736994-48737013 | MS.gene035944:intron | 35.0% | |
! | AGATGTCATCTTTAATGGGT+CGG | + | chr5.3:48739464-48739483 | None:intergenic | 35.0% |
! | GGTTAATTTTGCTTCGAGAT+CGG | - | chr5.3:48738257-48738276 | MS.gene035944:intron | 35.0% |
! | GTGGTTGATGTTATTTAGGT+AGG | - | chr5.3:48738033-48738052 | MS.gene035944:intron | 35.0% |
! | TATGAAGCATGGACAACTTT+TGG | + | chr5.3:48739764-48739783 | None:intergenic | 35.0% |
! | TGTGGTGTTAGTTCAAATGA+AGG | - | chr5.3:48736618-48736637 | MS.gene035944:intron | 35.0% |
!! | AGACATTAACTCTGAGATTG+AGG | - | chr5.3:48737825-48737844 | MS.gene035944:intron | 35.0% |
!! | CTTTTGGATTAGACGTGTTT+CGG | + | chr5.3:48739748-48739767 | None:intergenic | 35.0% |
!! | TTTTGGATTAGACGTGTTTC+GGG | + | chr5.3:48739747-48739766 | None:intergenic | 35.0% |
!!! | ACTTTTACGGGTGTTGTTTT+GGG | - | chr5.3:48738560-48738579 | MS.gene035944:intron | 35.0% |
!!! | GAGGATGTTTTGACTTTTAC+GGG | - | chr5.3:48738548-48738567 | MS.gene035944:intron | 35.0% |
!!! | GGAGGATGTTTTGACTTTTA+CGG | - | chr5.3:48738547-48738566 | MS.gene035944:intron | 35.0% |
!!! | GTCATTTTTCTGGGAAAAGA+AGG | - | chr5.3:48736065-48736084 | MS.gene035944:intron | 35.0% |
AAAAGCCAGCAATGGTTTGA+AGG | + | chr5.3:48736404-48736423 | None:intergenic | 40.0% | |
AAAGCCAGCAATGGTTTGAA+GGG | + | chr5.3:48736403-48736422 | None:intergenic | 40.0% | |
AAATGGCAGAGGAACAGATA+AGG | - | chr5.3:48739332-48739351 | MS.gene035944:intron | 40.0% | |
ACAACAACTTCAAATGGCAG+AGG | - | chr5.3:48739321-48739340 | MS.gene035944:intron | 40.0% | |
AGGATCTTGACCAGTTGTTA+CGG | - | chr5.3:48736367-48736386 | MS.gene035944:intron | 40.0% | |
ATCTCAGAGTTAATGTCTCC+CGG | + | chr5.3:48737823-48737842 | None:intergenic | 40.0% | |
ATGATGTTCTTTCGGTGAAC+CGG | - | chr5.3:48738448-48738467 | MS.gene035944:intron | 40.0% | |
ATTTCCCTTCAAACCATTGC+TGG | - | chr5.3:48736396-48736415 | MS.gene035944:intron | 40.0% | |
CTTCATGTTTGTATCCTGGT+GGG | - | chr5.3:48738232-48738251 | MS.gene035944:intron | 40.0% | |
GATCTCGAATCAAAAGCGAT+CGG | + | chr5.3:48738386-48738405 | None:intergenic | 40.0% | |
GATTTATGTTCGTCTTGAGC+AGG | - | chr5.3:48738799-48738818 | MS.gene035944:intron | 40.0% | |
GGAACCGAAGAAAAAGTAAG+AGG | + | chr5.3:48737133-48737152 | None:intergenic | 40.0% | |
GTGTCTTCTTTGATAGATCG+AGG | - | chr5.3:48738319-48738338 | MS.gene035944:intron | 40.0% | |
TCTTCATGTTTGTATCCTGG+TGG | - | chr5.3:48738231-48738250 | MS.gene035944:intron | 40.0% | |
! | AAACTACAGGCGCTGTATAT+AGG | + | chr5.3:48738762-48738781 | None:intergenic | 40.0% |
! | ACGACATAGTCTGATTTTGG+TGG | - | chr5.3:48738631-48738650 | MS.gene035944:intron | 40.0% |
! | GATGTCATCTTTAATGGGTC+GGG | + | chr5.3:48739463-48739482 | None:intergenic | 40.0% |
! | TAAAAAAGAGGGTGTGGTTG+TGG | - | chr5.3:48737950-48737969 | MS.gene035944:intron | 40.0% |
! | TTTTGATGCATCAGCTCCTA+TGG | - | chr5.3:48740241-48740260 | MS.gene035944:CDS | 40.0% |
!! | ATCGCTTTTGATTCGAGATC+GGG | - | chr5.3:48738386-48738405 | MS.gene035944:intron | 40.0% |
!! | ATTGAAACCAGGGCTTTGTT+AGG | - | chr5.3:48738689-48738708 | MS.gene035944:intron | 40.0% |
!! | ATTTGGTTCTGGAGTCTAGT+GGG | - | chr5.3:48738360-48738379 | MS.gene035944:intron | 40.0% |
!! | CTAGCTCTTGTTGAGTTTTG+GGG | - | chr5.3:48738127-48738146 | MS.gene035944:intron | 40.0% |
!! | GATCGCTTTTGATTCGAGAT+CGG | - | chr5.3:48738385-48738404 | MS.gene035944:intron | 40.0% |
!! | GCTAGCTCTTGTTGAGTTTT+GGG | - | chr5.3:48738126-48738145 | MS.gene035944:intron | 40.0% |
!! | TAGCTCTTGTTGAGTTTTGG+GGG | - | chr5.3:48738128-48738147 | MS.gene035944:intron | 40.0% |
!! | TTGTGGTGGATATGAACTCA+GGG | - | chr5.3:48739429-48739448 | MS.gene035944:intron | 40.0% |
!!! | ATAGTCTGATTTTGGTGGTG+AGG | - | chr5.3:48738636-48738655 | MS.gene035944:intron | 40.0% |
!!! | CTTTTACGGGTGTTGTTTTG+GGG | - | chr5.3:48738561-48738580 | MS.gene035944:intron | 40.0% |
!!! | GACTTTTACGGGTGTTGTTT+TGG | - | chr5.3:48738559-48738578 | MS.gene035944:intron | 40.0% |
!!! | TTTGGTGGTGAGGTTTCTTT+TGG | - | chr5.3:48738646-48738665 | MS.gene035944:intron | 40.0% |
AAAACAGAGGCGACCTACAA+CGG | + | chr5.3:48738095-48738114 | None:intergenic | 45.0% | |
AAAGGAAAAGGCTCAGCTCA+AGG | + | chr5.3:48738168-48738187 | None:intergenic | 45.0% | |
AACTCAACAAGAGCTAGCGA+CGG | + | chr5.3:48738124-48738143 | None:intergenic | 45.0% | |
ACACCATAACTAGCCAGACA+AGG | + | chr5.3:48738303-48738322 | None:intergenic | 45.0% | |
ACCTACATTCTCGAAAGTGG+TGG | + | chr5.3:48740183-48740202 | None:intergenic | 45.0% | |
ATCTTGACCAGTTGTTACGG+TGG | - | chr5.3:48736370-48736389 | MS.gene035944:intron | 45.0% | |
ATGCATGTACTCATGGTTGC+AGG | - | chr5.3:48739823-48739842 | MS.gene035944:intron | 45.0% | |
CCAACCTACATTCTCGAAAG+TGG | + | chr5.3:48740186-48740205 | None:intergenic | 45.0% | |
CCACTTTCGAGAATGTAGGT+TGG | - | chr5.3:48740183-48740202 | MS.gene035944:CDS | 45.0% | |
CCTACATTCTCGAAAGTGGT+GGG | + | chr5.3:48740182-48740201 | None:intergenic | 45.0% | |
CGCGGAAGTTGTATGAGTAT+TGG | - | chr5.3:48738483-48738502 | MS.gene035944:intron | 45.0% | |
CTTTGATAGATCGAGGGTGA+GGG | - | chr5.3:48738326-48738345 | MS.gene035944:intron | 45.0% | |
CTTTGTGAGCTTAGCTCAGT+TGG | - | chr5.3:48739134-48739153 | MS.gene035944:intron | 45.0% | |
GAGGTAAGAACATGTCACCA+TGG | - | chr5.3:48737844-48737863 | MS.gene035944:intron | 45.0% | |
TCTACTGCCTCAATGAAGTC+CGG | - | chr5.3:48737801-48737820 | MS.gene035944:intron | 45.0% | |
TCTTTGATAGATCGAGGGTG+AGG | - | chr5.3:48738325-48738344 | MS.gene035944:intron | 45.0% | |
TGGTCAAGATCCTAACCCAT+AGG | + | chr5.3:48736360-48736379 | None:intergenic | 45.0% | |
TGTCTAGTTGCAACCTTGTC+TGG | - | chr5.3:48738287-48738306 | MS.gene035944:intron | 45.0% | |
TTGGGGTGAGTAGTGACAAT+GGG | - | chr5.3:48738578-48738597 | MS.gene035944:intron | 45.0% | |
TTTGATAGATCGAGGGTGAG+GGG | - | chr5.3:48738327-48738346 | MS.gene035944:intron | 45.0% | |
! | CAACCTTGTCTGGCTAGTTA+TGG | - | chr5.3:48738297-48738316 | MS.gene035944:intron | 45.0% |
! | GATTCCTGAGAGTATACCTG+CGG | + | chr5.3:48737111-48737130 | None:intergenic | 45.0% |
! | GGGGGTGGTTGATGTTATTT+AGG | - | chr5.3:48738029-48738048 | MS.gene035944:intron | 45.0% |
! | GTATCGATGTGTCAGTGTGT+CGG | + | chr5.3:48739645-48739664 | None:intergenic | 45.0% |
! | TTGGTGGTTGTTGTCCTCAT+GGG | - | chr5.3:48738665-48738684 | MS.gene035944:intron | 45.0% |
! | TTGTAGGTCGCCTCTGTTTT+TGG | - | chr5.3:48738095-48738114 | MS.gene035944:intron | 45.0% |
! | TTTGGGGTGAGTAGTGACAA+TGG | - | chr5.3:48738577-48738596 | MS.gene035944:intron | 45.0% |
! | TTTGGTGGTTGTTGTCCTCA+TGG | - | chr5.3:48738664-48738683 | MS.gene035944:intron | 45.0% |
!! | CCTCATGGGTATTGAAACCA+GGG | - | chr5.3:48738679-48738698 | MS.gene035944:intron | 45.0% |
!! | CGCTAGCTCTTGTTGAGTTT+TGG | - | chr5.3:48738125-48738144 | MS.gene035944:intron | 45.0% |
!! | GATTTGGTTCTGGAGTCTAG+TGG | - | chr5.3:48738359-48738378 | MS.gene035944:intron | 45.0% |
!! | GTGTCTTGCTGATTTGGTTC+TGG | - | chr5.3:48738349-48738368 | MS.gene035944:intron | 45.0% |
!! | GTTGTGGTGGATATGAACTC+AGG | - | chr5.3:48739428-48739447 | MS.gene035944:intron | 45.0% |
!! | TCCTCATGGGTATTGAAACC+AGG | - | chr5.3:48738678-48738697 | MS.gene035944:intron | 45.0% |
!! | TGTAGGTCGCCTCTGTTTTT+GGG | - | chr5.3:48738096-48738115 | MS.gene035944:intron | 45.0% |
!! | TTCCAGGGGTATTCAGAACA+AGG | - | chr5.3:48737264-48737283 | MS.gene035944:intron | 45.0% |
!!! | AGGTAGGGAGCTTGTTTTAG+TGG | - | chr5.3:48738049-48738068 | MS.gene035944:intron | 45.0% |
!!! | GGTAGGGAGCTTGTTTTAGT+GGG | - | chr5.3:48738050-48738069 | MS.gene035944:intron | 45.0% |
!! | TATATATTATTAATATATTC+TGG | - | chr5.3:48737472-48737491 | MS.gene035944:intron | 5.0% |
!!! | ATTTTATTTTTGTTTATATT+TGG | - | chr5.3:48736789-48736808 | MS.gene035944:intron | 5.0% |
!!! | TTTTATATTTATATAGTTTA+GGG | + | chr5.3:48737935-48737954 | None:intergenic | 5.0% |
!!! | TTTTTATATTTATATAGTTT+AGG | + | chr5.3:48737936-48737955 | None:intergenic | 5.0% |
ATGTCTCCCGGACTTCATTG+AGG | + | chr5.3:48737811-48737830 | None:intergenic | 50.0% | |
ATGTTCTTTCGGTGAACCGG+AGG | - | chr5.3:48738451-48738470 | MS.gene035944:intron | 50.0% | |
CACAACACCTAACAAAGCCC+TGG | + | chr5.3:48738699-48738718 | None:intergenic | 50.0% | |
CCCACCACTTTCGAGAATGT+AGG | - | chr5.3:48740179-48740198 | MS.gene035944:CDS | 50.0% | |
CCCTGGTTTCAATACCCATG+AGG | + | chr5.3:48738682-48738701 | None:intergenic | 50.0% | |
CGGACGAGAGCTGATTAAGA+GGG | - | chr5.3:48738009-48738028 | MS.gene035944:intron | 50.0% | |
CTACTGCCTCAATGAAGTCC+GGG | - | chr5.3:48737802-48737821 | MS.gene035944:intron | 50.0% | |
GACGAGAGCTGATTAAGAGG+GGG | - | chr5.3:48738011-48738030 | MS.gene035944:intron | 50.0% | |
GGACGAGAGCTGATTAAGAG+GGG | - | chr5.3:48738010-48738029 | MS.gene035944:intron | 50.0% | |
GTCACGTGTCATGCAGAGAA+AGG | - | chr5.3:48739528-48739547 | MS.gene035944:intron | 50.0% | |
TCTCTGCATGACACGTGACA+AGG | + | chr5.3:48739527-48739546 | None:intergenic | 50.0% | |
TGTTCTTTCGGTGAACCGGA+GGG | - | chr5.3:48738452-48738471 | MS.gene035944:intron | 50.0% | |
! | ATGTTTGTATCCTGGTGGGC+CGG | - | chr5.3:48738236-48738255 | MS.gene035944:intron | 50.0% |
! | CGAGAATGTAGGTTGGCTAC+AGG | - | chr5.3:48740190-48740209 | MS.gene035944:CDS | 50.0% |
! | CTCCTTGTTCTGAATACCCC+TGG | + | chr5.3:48737269-48737288 | None:intergenic | 50.0% |
! | CTGAGAGTATACCTGCGGTA+GGG | + | chr5.3:48737106-48737125 | None:intergenic | 50.0% |
! | GCTCTTGGTGTATCCGTTGT+AGG | - | chr5.3:48738079-48738098 | MS.gene035944:intron | 50.0% |
! | GGTGGTGAGGTTTCTTTTGG+TGG | - | chr5.3:48738649-48738668 | MS.gene035944:intron | 50.0% |
! | GTAGGTTGGCTACAGGATAG+TGG | - | chr5.3:48740197-48740216 | MS.gene035944:CDS | 50.0% |
!! | CAGGGGTATTCAGAACAAGG+AGG | - | chr5.3:48737267-48737286 | MS.gene035944:intron | 50.0% |
!! | TCAGCTCTAGAGATGTGTGG+AGG | - | chr5.3:48738529-48738548 | MS.gene035944:CDS | 50.0% |
!! | TGAGGGGTGTCTTGCTGATT+TGG | - | chr5.3:48738343-48738362 | MS.gene035944:intron | 50.0% |
!!! | AGGGAGCTTGTTTTAGTGGG+TGG | - | chr5.3:48738053-48738072 | MS.gene035944:intron | 50.0% |
!!! | GGAGCTTGTTTTAGTGGGTG+GGG | - | chr5.3:48738055-48738074 | MS.gene035944:intron | 50.0% |
!!! | GGGAGCTTGTTTTAGTGGGT+GGG | - | chr5.3:48738054-48738073 | MS.gene035944:intron | 50.0% |
AGAGTATACCTGCGGTAGGG+TGG | + | chr5.3:48737103-48737122 | None:intergenic | 55.0% | |
CCTACCGCAGGTATACTCTC+AGG | - | chr5.3:48737104-48737123 | MS.gene035944:intron | 55.0% | |
GAGAGCTGATTAAGAGGGGG+TGG | - | chr5.3:48738014-48738033 | MS.gene035944:intron | 55.0% | |
GCAAAATTAACCGGCCCACC+AGG | + | chr5.3:48738249-48738268 | None:intergenic | 55.0% | |
GCGACGGAACCCAAAAACAG+AGG | + | chr5.3:48738108-48738127 | None:intergenic | 55.0% | |
GCGGACGAGAGCTGATTAAG+AGG | - | chr5.3:48738008-48738027 | MS.gene035944:intron | 55.0% | |
GGGTGAGTAGTGACAATGGG+TGG | - | chr5.3:48738581-48738600 | MS.gene035944:intron | 55.0% | |
TTTGTCGTCGGAACGCTCTG+CGG | - | chr5.3:48737989-48738008 | MS.gene035944:intron | 55.0% | |
! | CCTGAGAGTATACCTGCGGT+AGG | + | chr5.3:48737107-48737126 | None:intergenic | 55.0% |
! | TTTAGTGGGTGGGGAGCTCT+TGG | - | chr5.3:48738064-48738083 | MS.gene035944:intron | 55.0% |
!! | GGCTCAGCTCTAGAGATGTG+TGG | - | chr5.3:48738526-48738545 | MS.gene035944:CDS | 55.0% |
AACCGGAGGGTGATAGGTCG+CGG | - | chr5.3:48738465-48738484 | MS.gene035944:intron | 60.0% | |
TCGGTGAACCGGAGGGTGAT+AGG | - | chr5.3:48738459-48738478 | MS.gene035944:intron | 60.0% | |
TTCCGCGACCTATCACCCTC+CGG | + | chr5.3:48738470-48738489 | None:intergenic | 60.0% | |
TACCTGCGGTAGGGTGGCTC+AGG | + | chr5.3:48737097-48737116 | None:intergenic | 65.0% | |
TTCCTGAGCCACCCTACCGC+AGG | - | chr5.3:48737092-48737111 | MS.gene035944:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.3 | gene | 48735902 | 48740273 | 48735902 | ID=MS.gene035944 |
chr5.3 | mRNA | 48735902 | 48740273 | 48735902 | ID=MS.gene035944.t1;Parent=MS.gene035944 |
chr5.3 | exon | 48740089 | 48740273 | 48740089 | ID=MS.gene035944.t1.exon1;Parent=MS.gene035944.t1 |
chr5.3 | CDS | 48740089 | 48740273 | 48740089 | ID=cds.MS.gene035944.t1;Parent=MS.gene035944.t1 |
chr5.3 | exon | 48739207 | 48739260 | 48739207 | ID=MS.gene035944.t1.exon2;Parent=MS.gene035944.t1 |
chr5.3 | CDS | 48739207 | 48739260 | 48739207 | ID=cds.MS.gene035944.t1;Parent=MS.gene035944.t1 |
chr5.3 | exon | 48739062 | 48739094 | 48739062 | ID=MS.gene035944.t1.exon3;Parent=MS.gene035944.t1 |
chr5.3 | CDS | 48739062 | 48739094 | 48739062 | ID=cds.MS.gene035944.t1;Parent=MS.gene035944.t1 |
chr5.3 | exon | 48738887 | 48738905 | 48738887 | ID=MS.gene035944.t1.exon4;Parent=MS.gene035944.t1 |
chr5.3 | CDS | 48738887 | 48738905 | 48738887 | ID=cds.MS.gene035944.t1;Parent=MS.gene035944.t1 |
chr5.3 | exon | 48738487 | 48738548 | 48738487 | ID=MS.gene035944.t1.exon5;Parent=MS.gene035944.t1 |
chr5.3 | CDS | 48738487 | 48738548 | 48738487 | ID=cds.MS.gene035944.t1;Parent=MS.gene035944.t1 |
chr5.3 | exon | 48738329 | 48738356 | 48738329 | ID=MS.gene035944.t1.exon6;Parent=MS.gene035944.t1 |
chr5.3 | CDS | 48738329 | 48738356 | 48738329 | ID=cds.MS.gene035944.t1;Parent=MS.gene035944.t1 |
chr5.3 | exon | 48736822 | 48736883 | 48736822 | ID=MS.gene035944.t1.exon7;Parent=MS.gene035944.t1 |
chr5.3 | CDS | 48736822 | 48736883 | 48736822 | ID=cds.MS.gene035944.t1;Parent=MS.gene035944.t1 |
chr5.3 | exon | 48736626 | 48736725 | 48736626 | ID=MS.gene035944.t1.exon8;Parent=MS.gene035944.t1 |
chr5.3 | CDS | 48736626 | 48736725 | 48736626 | ID=cds.MS.gene035944.t1;Parent=MS.gene035944.t1 |
chr5.3 | exon | 48736268 | 48736330 | 48736268 | ID=MS.gene035944.t1.exon9;Parent=MS.gene035944.t1 |
chr5.3 | CDS | 48736268 | 48736330 | 48736268 | ID=cds.MS.gene035944.t1;Parent=MS.gene035944.t1 |
chr5.3 | exon | 48735902 | 48736002 | 48735902 | ID=MS.gene035944.t1.exon10;Parent=MS.gene035944.t1 |
chr5.3 | CDS | 48735902 | 48736002 | 48735902 | ID=cds.MS.gene035944.t1;Parent=MS.gene035944.t1 |
Gene Sequence |
Protein sequence |